RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09800 AT5G64660 |
| fragaria_vesca | FvH4_1g24000 |
| malus_domestica | MD01G1010900.v1.1 |
| prunus_persica | Prupe.6G159600_v2.0.a1 |
| pyrus_communis | pycom01g03990 pycom1353g00040 |
| rosa_chinensis | RchiOBHm_Chr2g0120131 |
| rosa_laevigata | RLG00000018524 |
| rosa_multiflora | Rmu_sc0016643.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00123700 |
| rosa_rugosa | Rorug02G0227000 |
| rosa_samantha | Rh2AG283600 Rh2BG294900 Rh2CG272300 Rh2DG308600 |
| rosa_wichuraiana | Rw2G022710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 158 |
| Acc36I | ACCTGC | 1 cut(s) | 158 |
| AccB1I | GGYRCC | 4 cut(s) | 28, 45, 584, 814 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 307, 325 |
| AccBSI | CCGCTC | 1 cut(s) | 718 |
| AccII | CGCG | 6 cut(s) | 111, 290, 380, 806, 825, 1061 |
| AccIII | TCCGGA | 1 cut(s) | 757 |
| AclI | AACGTT | 1 cut(s) | 486 |
| AclWI | GGATC | 1 cut(s) | 310 |
| AcoI | YGGCCR | 1 cut(s) | 285 |
| AcsI | RAATTY | 3 cut(s) | 404, 1146, 1225 |
| AcuI | CTGAAG | 1 cut(s) | 1052 |
| AcyI | GRCGYC | 1 cut(s) | 585 |
| AdeI | CACNNNGTG | 1 cut(s) | 1063 |
| AfaI | GTAC | 1 cut(s) | 240 |
| AfeI | AGCGCT | 1 cut(s) | 640 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 307, 325, 805, 934 |
| AflIII | ACRYGT | 1 cut(s) | 823 |
| AgsI | TTSAA | 7 cut(s) | 574, 674, 745, 782, 922, 932, 1096 |
| AjiI | CACGTC | 1 cut(s) | 64 |
| AjnI | CCWGG | 1 cut(s) | 300 |
| AluBI | AGCT | 7 cut(s) | 36, 313, 339, 703, 925, 962, 1044 |
| AluI | AGCT | 7 cut(s) | 36, 313, 339, 703, 925, 962, 1044 |
| Alw21I | GWGCWC | 2 cut(s) | 1046, 1059 |
| Alw26I | GTCTC | 2 cut(s) | 556, 1018 |
| AlwI | GGATC | 1 cut(s) | 310 |
| Aor13HI | TCCGGA | 1 cut(s) | 757 |
| Aor51HI | AGCGCT | 1 cut(s) | 640 |
| AoxI | GGCC | 4 cut(s) | 285, 478, 975, 1128 |
| ApeKI | GCWGC | 2 cut(s) | 616, 1002 |
| ApoI | RAATTY | 3 cut(s) | 404, 1146, 1225 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 174, 206 |
| AspLEI | GCGC | 6 cut(s) | 113, 436, 451, 587, 641, 1111 |
| AspS9I | GGNCC | 3 cut(s) | 228, 298, 328 |
| AsuC2I | CCSGG | 3 cut(s) | 77, 685, 1220 |
| AsuHPI | GGTGA | 7 cut(s) | 91, 91, 844, 958, 1075, 1132, 1234 |
| AvaII | GGWCC | 3 cut(s) | 228, 298, 328 |
| BaeGI | GKGCMC | 1 cut(s) | 50 |
| BanI | GGYRCC | 4 cut(s) | 28, 45, 584, 814 |
| BanII | GRGCYC | 1 cut(s) | 1046 |
| BbsI | GAAGAC | 1 cut(s) | 584 |
| Bbv12I | GWGCWC | 2 cut(s) | 1046, 1059 |
| BbvI | GCAGC | 2 cut(s) | 603, 989 |
| BccI | CCATC | 3 cut(s) | 319, 523, 914 |
| BceAI | ACGGC | 3 cut(s) | 154, 839, 915 |
| BciT130I | CCWGG | 1 cut(s) | 302 |
| BcnI | CCSGG | 3 cut(s) | 77, 685, 1220 |
| BcoDI | GTCTC | 2 cut(s) | 556, 1018 |
| BfaI | CTAG | 3 cut(s) | 440, 663, 839 |
| BfoI | RGCGCY | 4 cut(s) | 437, 452, 588, 642 |
| BfuAI | ACCTGC | 1 cut(s) | 158 |
| BglII | AGATCT | 2 cut(s) | 222, 966 |
| BisI | GCNGC | 6 cut(s) | 288, 291, 457, 460, 617, 1003 |
| BlsI | GCNGC | 6 cut(s) | 289, 292, 458, 461, 618, 1004 |
| Bme1390I | CCNGG | 4 cut(s) | 77, 302, 685, 1220 |
| Bme18I | GGWCC | 3 cut(s) | 228, 298, 328 |
| BmgBI | CACGTC | 1 cut(s) | 64 |
| BmgT120I | GGNCC | 3 cut(s) | 228, 298, 328 |
| BmiI | GGNNCC | 5 cut(s) | 30, 47, 586, 816, 853 |
| BmrFI | CCNGG | 4 cut(s) | 77, 302, 685, 1220 |
| BmsI | GCATC | 3 cut(s) | 126, 282, 1149 |
| BpiI | GAAGAC | 1 cut(s) | 584 |
| BpmI | CTGGAG | 2 cut(s) | 518, 611 |
| BpuEI | CTTGAG | 1 cut(s) | 1193 |
| BpuMI | CCSGG | 3 cut(s) | 77, 685, 1220 |
| Bsa29I | ATCGAT | 1 cut(s) | 677 |
| BsaHI | GRCGYC | 1 cut(s) | 585 |
| BsaJI | CCNNGG | 2 cut(s) | 75, 288 |
| BsaWI | WCCGGW | 4 cut(s) | 42, 92, 399, 757 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1069, 1099 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 307, 325, 805, 934 |
| Bse118I | RCCGGY | 4 cut(s) | 330, 467, 581, 587 |
| Bse3DI | GCAATG | 1 cut(s) | 469 |
| BseAI | TCCGGA | 1 cut(s) | 757 |
| BseBI | CCWGG | 1 cut(s) | 302 |
| BseCI | ATCGAT | 1 cut(s) | 677 |
| BseDI | CCNNGG | 2 cut(s) | 75, 288 |
| BseGI | GGATG | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 307, 325, 805, 934 |
| BseMI | GCAATG | 1 cut(s) | 469 |
| BseMII | CTCAG | 1 cut(s) | 633 |
| BseRI | GAGGAG | 1 cut(s) | 331 |
| BseSI | GKGCMC | 1 cut(s) | 50 |
| BseX3I | CGGCCG | 1 cut(s) | 285 |
| BseXI | GCAGC | 2 cut(s) | 603, 989 |
| BseYI | CCCAGC | 1 cut(s) | 358 |
| BsgI | GTGCAG | 2 cut(s) | 73, 1040 |
| Bsh1236I | CGCG | 6 cut(s) | 111, 290, 380, 806, 825, 1061 |
| Bsh1285I | CGRYCG | 5 cut(s) | 109, 245, 288, 681, 1106 |
| BshFI | GGCC | 4 cut(s) | 287, 480, 977, 1130 |
| BshNI | GGYRCC | 4 cut(s) | 28, 45, 584, 814 |
| BshVI | ATCGAT | 1 cut(s) | 677 |
| BsiEI | CGRYCG | 5 cut(s) | 109, 245, 288, 681, 1106 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1046, 1059 |
| BslFI | GGGAC | 5 cut(s) | 23, 58, 176, 266, 734 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 307, 325, 805, 934 |
| BsmAI | GTCTC | 2 cut(s) | 556, 1018 |
| BsmFI | GGGAC | 5 cut(s) | 23, 58, 176, 266, 734 |
| BsmI | GAATGC | 1 cut(s) | 492 |
| BsnI | GGCC | 4 cut(s) | 287, 480, 977, 1130 |
| Bsp1286I | GDGCHC | 3 cut(s) | 50, 1046, 1059 |
| Bsp13I | TCCGGA | 1 cut(s) | 757 |
| Bsp143I | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| BspANI | GGCC | 4 cut(s) | 287, 480, 977, 1130 |
| BspCNI | CTCAG | 1 cut(s) | 634 |
| BspDI | ATCGAT | 1 cut(s) | 677 |
| BspEI | TCCGGA | 1 cut(s) | 757 |
| BspFNI | CGCG | 6 cut(s) | 111, 290, 380, 806, 825, 1061 |
| BspLI | GGNNCC | 5 cut(s) | 30, 47, 586, 816, 853 |
| BspMI | ACCTGC | 1 cut(s) | 158 |
| BspPI | GGATC | 1 cut(s) | 310 |
| BspT107I | GGYRCC | 4 cut(s) | 28, 45, 584, 814 |
| BsrBI | CCGCTC | 1 cut(s) | 718 |
| BsrDI | GCAATG | 1 cut(s) | 469 |
| BsrFI | RCCGGY | 4 cut(s) | 330, 467, 581, 587 |
| BssAI | RCCGGY | 4 cut(s) | 330, 467, 581, 587 |
| BssECI | CCNNGG | 2 cut(s) | 75, 288 |
| BssMI | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| BssNI | GRCGYC | 1 cut(s) | 585 |
| Bst2UI | CCWGG | 1 cut(s) | 302 |
| Bst4CI | ACNGT | 4 cut(s) | 28, 243, 937, 1155 |
| BstACI | GRCGYC | 1 cut(s) | 585 |
| BstC8I | GCNNGC | 7 cut(s) | 115, 128, 469, 589, 960, 1059, 1175 |
| BstDEI | CTNAG | 3 cut(s) | 642, 963, 1125 |
| BstDSI | CCRYGG | 1 cut(s) | 288 |
| BstF5I | GGATG | 1 cut(s) | 117 |
| BstFNI | CGCG | 6 cut(s) | 111, 290, 380, 806, 825, 1061 |
| BstH2I | RGCGCY | 4 cut(s) | 437, 452, 588, 642 |
| BstHHI | GCGC | 6 cut(s) | 113, 436, 451, 587, 641, 1111 |
| BstKTI | GATC | 7 cut(s) | 225, 318, 681, 711, 804, 969, 1106 |
| BstMAI | GTCTC | 2 cut(s) | 556, 1018 |
| BstMBI | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| BstMCI | CGRYCG | 5 cut(s) | 109, 245, 288, 681, 1106 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 123, 319, 468, 477, 689, 1002, 1108, 1115, 1179 |
| BstNI | CCWGG | 1 cut(s) | 302 |
| BstSCI | CCNGG | 4 cut(s) | 75, 300, 683, 1218 |
| BstSLI | GKGCMC | 1 cut(s) | 50 |
| BstUI | CGCG | 6 cut(s) | 111, 290, 380, 806, 825, 1061 |
| BstV1I | GCAGC | 2 cut(s) | 603, 989 |
| BstV2I | GAAGAC | 1 cut(s) | 584 |
| BstX2I | RGATCY | 2 cut(s) | 222, 966 |
| BstYI | RGATCY | 2 cut(s) | 222, 966 |
| BstZI | CGGCCG | 1 cut(s) | 285 |
| Bsu15I | ATCGAT | 1 cut(s) | 677 |
| BsuRI | GGCC | 4 cut(s) | 287, 480, 977, 1130 |
| BsuTUI | ATCGAT | 1 cut(s) | 677 |
| BtgI | CCRYGG | 1 cut(s) | 288 |
| BtrI | CACGTC | 1 cut(s) | 64 |
| BtsCI | GGATG | 1 cut(s) | 117 |
| BveI | ACCTGC | 1 cut(s) | 158 |
| Cac8I | GCNNGC | 7 cut(s) | 115, 128, 469, 589, 960, 1059, 1175 |
| CfoI | GCGC | 6 cut(s) | 113, 436, 451, 587, 641, 1111 |
| Cfr10I | RCCGGY | 4 cut(s) | 330, 467, 581, 587 |
| Cfr13I | GGNCC | 3 cut(s) | 228, 298, 328 |
| Cfr42I | CCGCGG | 1 cut(s) | 291 |
| ClaI | ATCGAT | 1 cut(s) | 677 |
| CseI | GACGC | 2 cut(s) | 645, 1171 |
| CsiI | ACCWGGT | 1 cut(s) | 300 |
| Csp6I | GTAC | 1 cut(s) | 239 |
| CviAII | CATG | 1 cut(s) | 163 |
| CviQI | GTAC | 1 cut(s) | 239 |
| DdeI | CTNAG | 3 cut(s) | 642, 963, 1125 |
| DinI | GGCGCC | 1 cut(s) | 586 |
| DpnI | GATC | 7 cut(s) | 224, 317, 680, 710, 803, 968, 1105 |
| DpnII | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| DraIII | CACNNNGTG | 1 cut(s) | 1063 |
| EaeI | YGGCCR | 1 cut(s) | 285 |
| EagI | CGGCCG | 1 cut(s) | 285 |
| EciI | GGCGGA | 1 cut(s) | 1225 |
| Ecl136II | GAGCTC | 1 cut(s) | 1044 |
| EclXI | CGGCCG | 1 cut(s) | 285 |
| Eco24I | GRGCYC | 1 cut(s) | 1046 |
| Eco47I | GGWCC | 3 cut(s) | 228, 298, 328 |
| Eco47III | AGCGCT | 1 cut(s) | 640 |
| Eco52I | CGGCCG | 1 cut(s) | 285 |
| Eco53kI | GAGCTC | 1 cut(s) | 1044 |
| Eco57I | CTGAAG | 1 cut(s) | 1052 |
| EcoICRI | GAGCTC | 1 cut(s) | 1044 |
| EcoRI | GAATTC | 1 cut(s) | 1225 |
| EcoRII | CCWGG | 1 cut(s) | 300 |
| EcoT38I | GRGCYC | 1 cut(s) | 1046 |
| EgeI | GGCGCC | 1 cut(s) | 586 |
| EheI | GGCGCC | 1 cut(s) | 586 |
| FaeI | CATG | 1 cut(s) | 166 |
| FaiI | YATR | 4 cut(s) | 164, 1251, 1269, 1274 |
| FaqI | GGGAC | 5 cut(s) | 23, 58, 176, 266, 734 |
| FatI | CATG | 1 cut(s) | 162 |
| FauI | CCCGC | 2 cut(s) | 163, 711 |
| Fnu4HI | GCNGC | 6 cut(s) | 288, 291, 457, 460, 617, 1003 |
| FokI | GGATG | 1 cut(s) | 104 |
| FriOI | GRGCYC | 1 cut(s) | 1046 |
| Fsp4HI | GCNGC | 6 cut(s) | 288, 291, 457, 460, 617, 1003 |
| FspBI | CTAG | 3 cut(s) | 440, 663, 839 |
| GlaI | GCGC | 6 cut(s) | 112, 435, 450, 586, 640, 1110 |
| GluI | GCNGC | 6 cut(s) | 288, 291, 457, 460, 617, 1003 |
| GsaI | CCCAGC | 1 cut(s) | 362 |
| GsuI | CTGGAG | 2 cut(s) | 518, 611 |
| HaeII | RGCGCY | 4 cut(s) | 437, 452, 588, 642 |
| HaeIII | GGCC | 4 cut(s) | 287, 480, 977, 1130 |
| HgaI | GACGC | 2 cut(s) | 645, 1171 |
| HhaI | GCGC | 6 cut(s) | 113, 436, 451, 587, 641, 1111 |
| Hin1I | GRCGYC | 1 cut(s) | 585 |
| Hin1II | CATG | 1 cut(s) | 166 |
| Hin6I | GCGC | 6 cut(s) | 111, 434, 449, 585, 639, 1109 |
| HinP1I | GCGC | 6 cut(s) | 111, 434, 449, 585, 639, 1109 |
| HincII | GTYRAC | 1 cut(s) | 1140 |
| HindII | GTYRAC | 1 cut(s) | 1140 |
| HindIII | AAGCTT | 1 cut(s) | 701 |
| HphI | GGTGA | 7 cut(s) | 91, 91, 844, 958, 1075, 1132, 1234 |
| Hpy166II | GTNNAC | 2 cut(s) | 352, 1140 |
| Hpy188I | TCNGA | 7 cut(s) | 222, 232, 391, 708, 851, 883, 1201 |
| Hpy188III | TCNNGA | 9 cut(s) | 497, 526, 628, 648, 671, 758, 910, 919, 1210 |
| Hpy8I | GTNNAC | 2 cut(s) | 352, 1140 |
| HpyAV | CCTTC | 6 cut(s) | 289, 823, 947, 976, 983, 1027 |
| HpyCH4III | ACNGT | 4 cut(s) | 28, 243, 937, 1155 |
| HpyCH4IV | ACGT | 2 cut(s) | 63, 486 |
| HpyCH4V | TGCA | 4 cut(s) | 90, 166, 1021, 1162 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 123, 319, 468, 477, 689, 1002, 1108, 1115, 1179 |
| HpyF3I | CTNAG | 3 cut(s) | 642, 963, 1125 |
| HpySE526I | ACGT | 2 cut(s) | 63, 486 |
| Hsp92I | GRCGYC | 1 cut(s) | 585 |
| Hsp92II | CATG | 1 cut(s) | 166 |
| HspAI | GCGC | 6 cut(s) | 111, 434, 449, 585, 639, 1109 |
| KasI | GGCGCC | 1 cut(s) | 584 |
| Kpn2I | TCCGGA | 1 cut(s) | 757 |
| KroI | GCCGGC | 2 cut(s) | 467, 587 |
| KroNI | GCCGGC | 2 cut(s) | 469, 589 |
| KspI | CCGCGG | 1 cut(s) | 291 |
| Kzo9I | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| LmnI | GCTCC | 8 cut(s) | 310, 344, 499, 851, 930, 1054, 1077, 1099 |
| Lsp1109I | GCAGC | 2 cut(s) | 603, 989 |
| LweI | GCATC | 3 cut(s) | 126, 282, 1149 |
| MabI | ACCWGGT | 1 cut(s) | 300 |
| MaeI | CTAG | 3 cut(s) | 440, 663, 839 |
| MaeII | ACGT | 2 cut(s) | 63, 486 |
| MaeIII | GTNAC | 5 cut(s) | 97, 266, 1063, 1085, 1120 |
| MalI | GATC | 7 cut(s) | 224, 317, 680, 710, 803, 968, 1105 |
| MbiI | CCGCTC | 1 cut(s) | 718 |
| MboI | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| MboII | GAAGA | 4 cut(s) | 31, 376, 586, 589 |
| MfeI | CAATTG | 1 cut(s) | 1168 |
| MflI | RGATCY | 2 cut(s) | 222, 966 |
| MhlI | GDGCHC | 3 cut(s) | 50, 1046, 1059 |
| MluI | ACGCGT | 1 cut(s) | 823 |
| Mly113I | GGCGCC | 1 cut(s) | 585 |
| MlyI | GAGTC | 6 cut(s) | 105, 347, 653, 704, 763, 878 |
| MmeI | TCCRAC | 5 cut(s) | 145, 369, 868, 906, 912 |
| MreI | CGCCGGCG | 1 cut(s) | 587 |
| MroI | TCCGGA | 1 cut(s) | 757 |
| MroNI | GCCGGC | 2 cut(s) | 467, 587 |
| MseI | TTAA | 1 cut(s) | 749 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MspA1I | CMGCKG | 1 cut(s) | 290 |
| MspR9I | CCNGG | 4 cut(s) | 77, 302, 685, 1220 |
| MunI | CAATTG | 1 cut(s) | 1168 |
| Mva1269I | GAATGC | 1 cut(s) | 492 |
| MvaI | CCWGG | 1 cut(s) | 302 |
| MvnI | CGCG | 6 cut(s) | 111, 290, 380, 806, 825, 1061 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 123, 319, 468, 477, 689, 1002, 1108, 1115, 1179 |
| NaeI | GCCGGC | 2 cut(s) | 469, 589 |
| NarI | GGCGCC | 1 cut(s) | 585 |
| NciI | CCSGG | 3 cut(s) | 77, 685, 1220 |
| NdeII | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| NgoMIV | GCCGGC | 2 cut(s) | 467, 587 |
| NlaIII | CATG | 1 cut(s) | 166 |
| NlaIV | GGNNCC | 5 cut(s) | 30, 47, 586, 816, 853 |
| NmeAIII | GCCGAG | 6 cut(s) | 57, 263, 432, 718, 739, 1003 |
| NmuCI | GTSAC | 4 cut(s) | 97, 266, 1063, 1120 |
| PaqCI | CACCTGC | 1 cut(s) | 158 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 290, 417, 653, 899, 1046 |
| PctI | GAATGC | 1 cut(s) | 492 |
| PdiI | GCCGGC | 2 cut(s) | 469, 589 |
| PfeI | GAWTC | 5 cut(s) | 233, 674, 767, 835, 1069 |
| PflFI | GACNNNGTC | 1 cut(s) | 188 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 307, 325 |
| PkrI | GCNGC | 6 cut(s) | 289, 292, 458, 461, 618, 1004 |
| Ple19I | CGATCG | 2 cut(s) | 681, 1106 |
| PleI | GAGTC | 6 cut(s) | 104, 347, 652, 703, 762, 878 |
| PluTI | GGCGCC | 1 cut(s) | 588 |
| PpsI | GAGTC | 6 cut(s) | 104, 347, 652, 703, 762, 878 |
| Psp124BI | GAGCTC | 1 cut(s) | 1046 |
| Psp1406I | AACGTT | 1 cut(s) | 486 |
| Psp6I | CCWGG | 1 cut(s) | 300 |
| PspFI | CCCAGC | 1 cut(s) | 358 |
| PspGI | CCWGG | 1 cut(s) | 300 |
| PspN4I | GGNNCC | 5 cut(s) | 30, 47, 586, 816, 853 |
| PspPI | GGNCC | 3 cut(s) | 228, 298, 328 |
| PsuI | RGATCY | 2 cut(s) | 222, 966 |
| PsyI | GACNNNGTC | 1 cut(s) | 188 |
| PvuI | CGATCG | 2 cut(s) | 681, 1106 |
| RsaI | GTAC | 1 cut(s) | 240 |
| RsaNI | GTAC | 1 cut(s) | 239 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SacI | GAGCTC | 1 cut(s) | 1046 |
| SacII | CCGCGG | 1 cut(s) | 291 |
| SaqAI | TTAA | 1 cut(s) | 749 |
| SatI | GCNGC | 6 cut(s) | 288, 291, 457, 460, 617, 1003 |
| Sau3AI | GATC | 7 cut(s) | 222, 315, 678, 708, 801, 966, 1103 |
| Sau96I | GGNCC | 3 cut(s) | 228, 298, 328 |
| SchI | GAGTC | 6 cut(s) | 105, 347, 653, 704, 763, 878 |
| ScrFI | CCNGG | 4 cut(s) | 77, 302, 685, 1220 |
| SduI | GDGCHC | 3 cut(s) | 50, 1046, 1059 |
| SexAI | ACCWGGT | 1 cut(s) | 300 |
| SfaNI | GCATC | 3 cut(s) | 126, 282, 1149 |
| SfoI | GGCGCC | 1 cut(s) | 586 |
| Sfr303I | CCGCGG | 1 cut(s) | 291 |
| SgrAI | CRCCGGYG | 1 cut(s) | 587 |
| SgrBI | CCGCGG | 1 cut(s) | 291 |
| SinI | GGWCC | 3 cut(s) | 228, 298, 328 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| SmlI | CTYRAG | 1 cut(s) | 1208 |
| SmoI | CTYRAG | 1 cut(s) | 1208 |
| SspDI | GGCGCC | 1 cut(s) | 584 |
| SspMI | CTAG | 3 cut(s) | 440, 663, 839 |
| SstI | GAGCTC | 1 cut(s) | 1046 |
| StyD4I | CCNGG | 4 cut(s) | 75, 300, 683, 1218 |
| TaaI | ACNGT | 4 cut(s) | 28, 243, 937, 1155 |
| TaiI | ACGT | 2 cut(s) | 66, 489 |
| TaqI | TCGA | 7 cut(s) | 60, 132, 647, 677, 893, 909, 1040 |
| TauI | GCSGC | 4 cut(s) | 290, 293, 459, 462 |
| TfiI | GAWTC | 5 cut(s) | 233, 674, 767, 835, 1069 |
| Tru1I | TTAA | 1 cut(s) | 749 |
| Tru9I | TTAA | 1 cut(s) | 749 |
| TseFI | GTSAC | 4 cut(s) | 97, 266, 1063, 1120 |
| TseI | GCWGC | 2 cut(s) | 616, 1002 |
| Tsp45I | GTSAC | 4 cut(s) | 97, 266, 1063, 1120 |
| TspDTI | ATGAA | 2 cut(s) | 83, 509 |
| TspGWI | ACGGA | 4 cut(s) | 270, 489, 738, 1067 |
| Tth111I | GACNNNGTC | 1 cut(s) | 188 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 307, 325 |
| VpaK11BI | GGWCC | 3 cut(s) | 228, 298, 328 |
| XapI | RAATTY | 3 cut(s) | 404, 1146, 1225 |
| XspI | CTAG | 3 cut(s) | 440, 663, 839 |