RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09800 AT5G64660 |
| fragaria_vesca | FvH4_1g24000 |
| malus_domestica | MD01G1010900.v1.1 |
| prunus_persica | Prupe.6G159600_v2.0.a1 |
| pyrus_communis | pycom01g03990 pycom1353g00040 |
| rosa_chinensis | RchiOBHm_Chr2g0120131 |
| rosa_laevigata | RLG00000018524 |
| rosa_multiflora | Rmu_sc0016643.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00123700 |
| rosa_rugosa | Rorug02G0227000 |
| rosa_samantha | Rh2AG283600 Rh2BG294900 Rh2CG272300 Rh2DG308600 |
| rosa_wichuraiana | Rw2G022710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 161 |
| AatII | GACGTC | 1 cut(s) | 498 |
| Acc36I | ACCTGC | 2 cut(s) | 161, 198 |
| AccB1I | GGYRCC | 1 cut(s) | 48 |
| AccBSI | CCGCTC | 2 cut(s) | 114, 319 |
| AccI | GTMKAC | 1 cut(s) | 806 |
| AccII | CGCG | 3 cut(s) | 591, 819, 1037 |
| AclWI | GGATC | 4 cut(s) | 691, 755, 768, 998 |
| AcoI | YGGCCR | 1 cut(s) | 586 |
| AcsI | RAATTY | 3 cut(s) | 410, 637, 1201 |
| AcvI | CACGTG | 1 cut(s) | 634 |
| AcyI | GRCGYC | 4 cut(s) | 99, 495, 602, 809 |
| AdeI | CACNNNGTG | 1 cut(s) | 1039 |
| AfeI | AGCGCT | 1 cut(s) | 128 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 550, 750 |
| AflIII | ACRYGT | 1 cut(s) | 631 |
| AgsI | TTSAA | 2 cut(s) | 577, 916 |
| AjiI | CACGTC | 1 cut(s) | 67 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 815, 847 |
| AluBI | AGCT | 2 cut(s) | 559, 859 |
| AluI | AGCT | 2 cut(s) | 559, 859 |
| Alw21I | GWGCWC | 1 cut(s) | 1035 |
| Alw26I | GTCTC | 2 cut(s) | 221, 788 |
| AlwI | GGATC | 4 cut(s) | 691, 755, 768, 998 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1003 |
| Ama87I | CYCGRG | 2 cut(s) | 458, 750 |
| Aor51HI | AGCGCT | 1 cut(s) | 128 |
| AoxI | GGCC | 2 cut(s) | 586, 690 |
| ApeKI | GCWGC | 4 cut(s) | 465, 607, 1003, 1129 |
| ApoI | RAATTY | 3 cut(s) | 410, 637, 1201 |
| AspLEI | GCGC | 3 cut(s) | 129, 819, 1087 |
| AspS9I | GGNCC | 3 cut(s) | 231, 313, 877 |
| AsuC2I | CCSGG | 1 cut(s) | 551 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 94, 541, 952, 1051 |
| AsuII | TTCGAA | 1 cut(s) | 1205 |
| AvaI | CYCGRG | 2 cut(s) | 458, 750 |
| AvaII | GGWCC | 3 cut(s) | 231, 313, 877 |
| BaeGI | GKGCMC | 2 cut(s) | 36, 53 |
| BamHI | GGATCC | 1 cut(s) | 760 |
| BanI | GGYRCC | 1 cut(s) | 48 |
| BauI | CACGAG | 1 cut(s) | 787 |
| BbrPI | CACGTG | 1 cut(s) | 634 |
| BbsI | GAAGAC | 1 cut(s) | 486 |
| Bbv12I | GWGCWC | 1 cut(s) | 1035 |
| BbvI | GCAGC | 4 cut(s) | 477, 594, 990, 1116 |
| BccI | CCATC | 4 cut(s) | 64, 272, 561, 710 |
| BceAI | ACGGC | 5 cut(s) | 157, 361, 445, 762, 909 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 397, 431 |
| BclI | TGATCA | 1 cut(s) | 516 |
| BcnI | CCSGG | 1 cut(s) | 551 |
| BcoDI | GTCTC | 2 cut(s) | 221, 788 |
| BfaI | CTAG | 1 cut(s) | 440 |
| BfoI | RGCGCY | 1 cut(s) | 130 |
| BfuAI | ACCTGC | 2 cut(s) | 161, 198 |
| BisI | GCNGC | 8 cut(s) | 466, 469, 589, 608, 1004, 1023, 1083, 1130 |
| BlsI | GCNGC | 8 cut(s) | 467, 470, 590, 609, 1005, 1024, 1084, 1131 |
| Bme1390I | CCNGG | 1 cut(s) | 551 |
| Bme18I | GGWCC | 3 cut(s) | 231, 313, 877 |
| BmeT110I | CYCGRG | 2 cut(s) | 458, 750 |
| BmgBI | CACGTC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 3 cut(s) | 231, 313, 877 |
| BmiI | GGNNCC | 5 cut(s) | 50, 315, 762, 878, 879 |
| BmrFI | CCNGG | 1 cut(s) | 551 |
| BmsI | GCATC | 4 cut(s) | 48, 129, 659, 1125 |
| BpiI | GAAGAC | 1 cut(s) | 486 |
| BpmI | CTGGAG | 1 cut(s) | 100 |
| Bpu14I | TTCGAA | 1 cut(s) | 1205 |
| BpuEI | CTTGAG | 1 cut(s) | 1169 |
| BpuMI | CCSGG | 1 cut(s) | 551 |
| BsaAI | YACGTR | 1 cut(s) | 634 |
| BsaBI | GATNNNNATC | 1 cut(s) | 701 |
| BsaHI | GRCGYC | 4 cut(s) | 99, 495, 602, 809 |
| BsaJI | CCNNGG | 3 cut(s) | 309, 687, 744 |
| BsaWI | WCCGGW | 1 cut(s) | 45 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 98, 128, 545, 575, 896, 926 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 550, 750 |
| Bse118I | RCCGGY | 3 cut(s) | 95, 584, 1153 |
| Bse3DI | GCAATG | 2 cut(s) | 478, 615 |
| Bse8I | GATNNNNATC | 1 cut(s) | 701 |
| BseDI | CCNNGG | 3 cut(s) | 309, 687, 744 |
| BseGI | GGATG | 5 cut(s) | 24, 120, 219, 435, 576 |
| BseJI | GATNNNNATC | 1 cut(s) | 701 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 550, 750 |
| BseMI | GCAATG | 2 cut(s) | 478, 615 |
| BseRI | GAGGAG | 4 cut(s) | 164, 262, 569, 602 |
| BseSI | GKGCMC | 2 cut(s) | 36, 53 |
| BseX3I | CGGCCG | 1 cut(s) | 586 |
| BseXI | GCAGC | 4 cut(s) | 477, 594, 990, 1116 |
| BseYI | CCCAGC | 2 cut(s) | 35, 656 |
| BsgI | GTGCAG | 2 cut(s) | 76, 1016 |
| Bsh1236I | CGCG | 3 cut(s) | 591, 819, 1037 |
| Bsh1285I | CGRYCG | 2 cut(s) | 112, 589 |
| BshFI | GGCC | 2 cut(s) | 588, 692 |
| BshNI | GGYRCC | 1 cut(s) | 48 |
| BsiEI | CGRYCG | 2 cut(s) | 112, 589 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1035 |
| BsiHKCI | CYCGRG | 2 cut(s) | 458, 750 |
| BsiSI | CCGG | 5 cut(s) | 46, 96, 550, 585, 1154 |
| BslFI | GGGAC | 2 cut(s) | 23, 890 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 550, 750 |
| BsmAI | GTCTC | 2 cut(s) | 221, 788 |
| BsmBI | CGTCTC | 1 cut(s) | 221 |
| BsmFI | GGGAC | 2 cut(s) | 23, 890 |
| BsnI | GGCC | 2 cut(s) | 588, 692 |
| BsoBI | CYCGRG | 2 cut(s) | 458, 750 |
| Bsp119I | TTCGAA | 1 cut(s) | 1205 |
| Bsp1286I | GDGCHC | 3 cut(s) | 36, 53, 1035 |
| Bsp143I | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| BspANI | GGCC | 2 cut(s) | 588, 692 |
| BspFNI | CGCG | 3 cut(s) | 591, 819, 1037 |
| BspLI | GGNNCC | 5 cut(s) | 50, 315, 762, 878, 879 |
| BspMI | ACCTGC | 2 cut(s) | 161, 198 |
| BspPI | GGATC | 4 cut(s) | 691, 755, 768, 998 |
| BspT104I | TTCGAA | 1 cut(s) | 1205 |
| BspT107I | GGYRCC | 1 cut(s) | 48 |
| BsrBI | CCGCTC | 2 cut(s) | 114, 319 |
| BsrDI | GCAATG | 2 cut(s) | 478, 615 |
| BsrFI | RCCGGY | 3 cut(s) | 95, 584, 1153 |
| BssAI | RCCGGY | 3 cut(s) | 95, 584, 1153 |
| BssECI | CCNNGG | 3 cut(s) | 309, 687, 744 |
| BssMI | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| BssNI | GRCGYC | 4 cut(s) | 99, 495, 602, 809 |
| BssSI | CACGAG | 1 cut(s) | 787 |
| BssT1I | CCWWGG | 1 cut(s) | 309 |
| Bst2BI | CACGAG | 1 cut(s) | 787 |
| Bst4CI | ACNGT | 4 cut(s) | 769, 901, 931, 1050 |
| Bst6I | CTCTTC | 1 cut(s) | 289 |
| BstACI | GRCGYC | 4 cut(s) | 99, 495, 602, 809 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1003 |
| BstBAI | YACGTR | 1 cut(s) | 634 |
| BstBI | TTCGAA | 1 cut(s) | 1205 |
| BstC8I | GCNNGC | 4 cut(s) | 131, 1035, 1151, 1155 |
| BstDEI | CTNAG | 1 cut(s) | 1233 |
| BstDSI | CCRYGG | 1 cut(s) | 744 |
| BstF5I | GGATG | 5 cut(s) | 24, 120, 219, 435, 576 |
| BstFNI | CGCG | 3 cut(s) | 591, 819, 1037 |
| BstH2I | RGCGCY | 1 cut(s) | 130 |
| BstHHI | GCGC | 3 cut(s) | 129, 819, 1087 |
| BstKTI | GATC | 6 cut(s) | 519, 699, 705, 763, 798, 993 |
| BstMAI | GTCTC | 2 cut(s) | 221, 788 |
| BstMBI | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| BstMCI | CGRYCG | 2 cut(s) | 112, 589 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 126, 594, 1003, 1091, 1135 |
| BstSCI | CCNGG | 1 cut(s) | 549 |
| BstSLI | GKGCMC | 2 cut(s) | 36, 53 |
| BstUI | CGCG | 3 cut(s) | 591, 819, 1037 |
| BstV1I | GCAGC | 4 cut(s) | 477, 594, 990, 1116 |
| BstV2I | GAAGAC | 1 cut(s) | 486 |
| BstX2I | RGATCY | 2 cut(s) | 696, 760 |
| BstYI | RGATCY | 2 cut(s) | 696, 760 |
| BstZI | CGGCCG | 1 cut(s) | 586 |
| BsuRI | GGCC | 2 cut(s) | 588, 692 |
| BtgI | CCRYGG | 1 cut(s) | 744 |
| BtrI | CACGTC | 1 cut(s) | 67 |
| BtsCI | GGATG | 5 cut(s) | 24, 120, 219, 435, 576 |
| BtsI | GCAGTG | 1 cut(s) | 855 |
| BtsIMutI | CAGTG | 1 cut(s) | 855 |
| BveI | ACCTGC | 2 cut(s) | 161, 198 |
| Cac8I | GCNNGC | 4 cut(s) | 131, 1035, 1151, 1155 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1003 |
| CfoI | GCGC | 3 cut(s) | 129, 819, 1087 |
| Cfr10I | RCCGGY | 3 cut(s) | 95, 584, 1153 |
| Cfr13I | GGNCC | 3 cut(s) | 231, 313, 877 |
| CseI | GACGC | 3 cut(s) | 88, 591, 817 |
| CviAII | CATG | 4 cut(s) | 166, 340, 626, 1249 |
| DdeI | CTNAG | 1 cut(s) | 1233 |
| DpnI | GATC | 6 cut(s) | 518, 698, 704, 762, 797, 992 |
| DpnII | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| DraIII | CACNNNGTG | 1 cut(s) | 1039 |
| EaeI | YGGCCR | 1 cut(s) | 586 |
| EagI | CGGCCG | 1 cut(s) | 586 |
| Eam1104I | CTCTTC | 1 cut(s) | 289 |
| EarI | CTCTTC | 1 cut(s) | 289 |
| EciI | GGCGGA | 1 cut(s) | 311 |
| EclXI | CGGCCG | 1 cut(s) | 586 |
| Eco130I | CCWWGG | 1 cut(s) | 309 |
| Eco32I | GATATC | 1 cut(s) | 57 |
| Eco47I | GGWCC | 3 cut(s) | 231, 313, 877 |
| Eco47III | AGCGCT | 1 cut(s) | 128 |
| Eco52I | CGGCCG | 1 cut(s) | 586 |
| Eco72I | CACGTG | 1 cut(s) | 634 |
| Eco88I | CYCGRG | 2 cut(s) | 458, 750 |
| EcoO109I | RGGNCCY | 2 cut(s) | 313, 877 |
| EcoRI | GAATTC | 2 cut(s) | 637, 1201 |
| EcoRV | GATATC | 1 cut(s) | 57 |
| EcoT14I | CCWWGG | 1 cut(s) | 309 |
| ErhI | CCWWGG | 1 cut(s) | 309 |
| Esp3I | CGTCTC | 1 cut(s) | 221 |
| FaeI | CATG | 4 cut(s) | 169, 343, 629, 1252 |
| FaiI | YATR | 7 cut(s) | 167, 341, 627, 964, 1227, 1245, 1250 |
| FaqI | GGGAC | 2 cut(s) | 23, 890 |
| FatI | CATG | 4 cut(s) | 165, 339, 625, 1248 |
| FauI | CCCGC | 3 cut(s) | 166, 324, 945 |
| FbaI | TGATCA | 1 cut(s) | 516 |
| FblI | GTMKAC | 1 cut(s) | 806 |
| Fnu4HI | GCNGC | 8 cut(s) | 466, 469, 589, 608, 1004, 1023, 1083, 1130 |
| FokI | GGATG | 5 cut(s) | 11, 107, 206, 422, 583 |
| Fsp4HI | GCNGC | 8 cut(s) | 466, 469, 589, 608, 1004, 1023, 1083, 1130 |
| FspBI | CTAG | 1 cut(s) | 440 |
| GlaI | GCGC | 3 cut(s) | 128, 818, 1086 |
| GluI | GCNGC | 8 cut(s) | 466, 469, 589, 608, 1004, 1023, 1083, 1130 |
| GsaI | CCCAGC | 2 cut(s) | 39, 660 |
| GsuI | CTGGAG | 1 cut(s) | 100 |
| HaeII | RGCGCY | 1 cut(s) | 130 |
| HaeIII | GGCC | 2 cut(s) | 588, 692 |
| HapII | CCGG | 5 cut(s) | 46, 96, 550, 585, 1154 |
| HgaI | GACGC | 3 cut(s) | 88, 591, 817 |
| HhaI | GCGC | 3 cut(s) | 129, 819, 1087 |
| Hin1I | GRCGYC | 4 cut(s) | 99, 495, 602, 809 |
| Hin1II | CATG | 4 cut(s) | 169, 343, 629, 1252 |
| Hin6I | GCGC | 3 cut(s) | 127, 817, 1085 |
| HinP1I | GCGC | 3 cut(s) | 127, 817, 1085 |
| HincII | GTYRAC | 2 cut(s) | 807, 1116 |
| HindII | GTYRAC | 2 cut(s) | 807, 1116 |
| HinfI | GANTC | 7 cut(s) | 74, 236, 359, 392, 645, 668, 781 |
| HpaII | CCGG | 5 cut(s) | 46, 96, 550, 585, 1154 |
| HphI | GGTGA | 5 cut(s) | 16, 94, 541, 952, 1051 |
| Hpy166II | GTNNAC | 3 cut(s) | 682, 807, 1116 |
| Hpy188I | TCNGA | 4 cut(s) | 235, 397, 765, 1259 |
| Hpy188III | TCNNGA | 7 cut(s) | 511, 564, 642, 700, 752, 843, 1186 |
| Hpy8I | GTNNAC | 3 cut(s) | 682, 807, 1116 |
| HpyAV | CCTTC | 8 cut(s) | 364, 526, 751, 817, 901, 910, 937, 941 |
| HpyCH4III | ACNGT | 4 cut(s) | 769, 901, 931, 1050 |
| HpyCH4IV | ACGT | 4 cut(s) | 66, 214, 495, 633 |
| HpyCH4V | TGCA | 6 cut(s) | 93, 169, 211, 620, 997, 1138 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 126, 594, 1003, 1091, 1135 |
| HpyF3I | CTNAG | 1 cut(s) | 1233 |
| HpySE526I | ACGT | 4 cut(s) | 66, 214, 495, 633 |
| Hsp92I | GRCGYC | 4 cut(s) | 99, 495, 602, 809 |
| Hsp92II | CATG | 4 cut(s) | 169, 343, 629, 1252 |
| HspAI | GCGC | 3 cut(s) | 127, 817, 1085 |
| KflI | GGGWCCC | 1 cut(s) | 877 |
| KroI | GCCGGC | 1 cut(s) | 1153 |
| KroNI | GCCGGC | 1 cut(s) | 1155 |
| Ksp22I | TGATCA | 1 cut(s) | 516 |
| Kzo9I | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| LmnI | GCTCC | 8 cut(s) | 119, 198, 324, 556, 615, 845, 1030, 1053 |
| Lsp1109I | GCAGC | 4 cut(s) | 477, 594, 990, 1116 |
| LweI | GCATC | 4 cut(s) | 48, 129, 659, 1125 |
| MaeI | CTAG | 1 cut(s) | 440 |
| MaeII | ACGT | 4 cut(s) | 66, 214, 495, 633 |
| MaeIII | GTNAC | 2 cut(s) | 100, 1039 |
| MalI | GATC | 6 cut(s) | 518, 698, 704, 762, 797, 992 |
| MbiI | CCGCTC | 2 cut(s) | 114, 319 |
| MboI | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| MboII | GAAGA | 5 cut(s) | 34, 259, 276, 491, 970 |
| MflI | RGATCY | 2 cut(s) | 696, 760 |
| MhlI | GDGCHC | 3 cut(s) | 36, 53, 1035 |
| MluCI | AATT | 5 cut(s) | 410, 637, 883, 1144, 1201 |
| MlyI | GAGTC | 3 cut(s) | 230, 401, 790 |
| MmeI | TCCRAC | 4 cut(s) | 258, 319, 420, 788 |
| MroNI | GCCGGC | 1 cut(s) | 1153 |
| MseI | TTAA | 1 cut(s) | 1071 |
| MslI | CAYNNNNRTG | 1 cut(s) | 29 |
| MspA1I | CMGCKG | 2 cut(s) | 468, 859 |
| MspI | CCGG | 5 cut(s) | 46, 96, 550, 585, 1154 |
| MspR9I | CCNGG | 1 cut(s) | 551 |
| MvnI | CGCG | 3 cut(s) | 591, 819, 1037 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 126, 594, 1003, 1091, 1135 |
| NaeI | GCCGGC | 1 cut(s) | 1155 |
| NciI | CCSGG | 1 cut(s) | 551 |
| NdeII | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| NgoMIV | GCCGGC | 1 cut(s) | 1153 |
| NlaIII | CATG | 4 cut(s) | 169, 343, 629, 1252 |
| NlaIV | GGNNCC | 5 cut(s) | 50, 315, 762, 878, 879 |
| NmeAIII | GCCGAG | 2 cut(s) | 712, 733 |
| NmuCI | GTSAC | 2 cut(s) | 100, 1039 |
| NspV | TTCGAA | 1 cut(s) | 1205 |
| PaqCI | CACCTGC | 1 cut(s) | 161 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 220, 423, 498, 507, 978, 1022 |
| PdiI | GCCGGC | 1 cut(s) | 1155 |
| PfeI | GAWTC | 4 cut(s) | 74, 359, 645, 668 |
| PkrI | GCNGC | 8 cut(s) | 467, 470, 590, 609, 1005, 1024, 1084, 1131 |
| PleI | GAGTC | 3 cut(s) | 230, 400, 789 |
| PmaCI | CACGTG | 1 cut(s) | 634 |
| PmlI | CACGTG | 1 cut(s) | 634 |
| PpsI | GAGTC | 3 cut(s) | 230, 400, 789 |
| Ppu21I | YACGTR | 1 cut(s) | 634 |
| PpuMI | RGGWCCY | 2 cut(s) | 313, 877 |
| Psp5II | RGGWCCY | 2 cut(s) | 313, 877 |
| PspCI | CACGTG | 1 cut(s) | 634 |
| PspFI | CCCAGC | 2 cut(s) | 35, 656 |
| PspN4I | GGNNCC | 5 cut(s) | 50, 315, 762, 878, 879 |
| PspPI | GGNCC | 3 cut(s) | 231, 313, 877 |
| PspPPI | RGGWCCY | 2 cut(s) | 313, 877 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1003 |
| PsuI | RGATCY | 2 cut(s) | 696, 760 |
| PvuII | CAGCTG | 1 cut(s) | 859 |
| RseI | CAYNNNNRTG | 1 cut(s) | 29 |
| SalI | GTCGAC | 1 cut(s) | 805 |
| SaqAI | TTAA | 1 cut(s) | 1071 |
| SatI | GCNGC | 8 cut(s) | 466, 469, 589, 608, 1004, 1023, 1083, 1130 |
| Sau3AI | GATC | 6 cut(s) | 516, 696, 702, 760, 795, 990 |
| Sau96I | GGNCC | 3 cut(s) | 231, 313, 877 |
| SchI | GAGTC | 3 cut(s) | 230, 401, 790 |
| ScrFI | CCNGG | 1 cut(s) | 551 |
| SduI | GDGCHC | 3 cut(s) | 36, 53, 1035 |
| SfaNI | GCATC | 4 cut(s) | 48, 129, 659, 1125 |
| SfuI | TTCGAA | 1 cut(s) | 1205 |
| SgrAI | CRCCGGYG | 1 cut(s) | 95 |
| SinI | GGWCC | 3 cut(s) | 231, 313, 877 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 29 |
| SmlI | CTYRAG | 1 cut(s) | 1184 |
| SmoI | CTYRAG | 1 cut(s) | 1184 |
| Sse9I | AATT | 5 cut(s) | 410, 637, 883, 1144, 1201 |
| SspI | AATATT | 1 cut(s) | 1125 |
| SspMI | CTAG | 1 cut(s) | 440 |
| StyD4I | CCNGG | 1 cut(s) | 549 |
| StyI | CCWWGG | 1 cut(s) | 309 |
| TaaI | ACNGT | 4 cut(s) | 769, 901, 931, 1050 |
| TaiI | ACGT | 4 cut(s) | 69, 217, 498, 636 |
| TasI | AATT | 5 cut(s) | 410, 637, 883, 1144, 1201 |
| TauI | GCSGC | 4 cut(s) | 471, 591, 1025, 1085 |
| TfiI | GAWTC | 4 cut(s) | 74, 359, 645, 668 |
| Tru1I | TTAA | 1 cut(s) | 1071 |
| Tru9I | TTAA | 1 cut(s) | 1071 |
| TscAI | CASTG | 1 cut(s) | 855 |
| TseFI | GTSAC | 2 cut(s) | 100, 1039 |
| TseI | GCWGC | 4 cut(s) | 465, 607, 1003, 1129 |
| Tsp45I | GTSAC | 2 cut(s) | 100, 1039 |
| TspDTI | ATGAA | 1 cut(s) | 424 |
| TspGWI | ACGGA | 2 cut(s) | 212, 1043 |
| TspRI | CASTG | 1 cut(s) | 855 |
| VpaK11BI | GGWCC | 3 cut(s) | 231, 313, 877 |
| XapI | RAATTY | 3 cut(s) | 410, 637, 1201 |
| XmiI | GTMKAC | 1 cut(s) | 806 |
| XspI | CTAG | 1 cut(s) | 440 |
| ZraI | GACGTC | 1 cut(s) | 496 |