Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0014228

Physical Location & Seq

Genomic Coordinates Reverse (-)

57573676 .. 57574899

Gene Structure 1224 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00123700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1224 bp

ATGAAATCCCCTGTGAGCCTGTGCACCGGGGTCACCTACGACCGCGCCAGCATCCAGCGCTGGCTGGACGACGGCAACAACACCTGCCCCGCCACCATGCAAGTCCTCTCTTCTAAGGACTTCGTACCCAACCGCACCCTCCACCGCCTCATACAGATCTGGTCCGAATCGGTGCGTCTCCGAAAGGCGCGATTCGAAAGCGACAACAGCAGCAACTCCAAAGACCAGGTGGTGGAGCTGATTCAGCAGATGGACCGCCACAGCTCCTCGTCTGTGGATTCGCTGGCCAAGATTGTGCGGTTCGCCAAGGAGTCGGAAGAGAACAGGAAGTTCCTCGCCAAGTGCGACGGCTTTCTGGCGCTGCTCGTGGAGGCTCTCTCCGGCGGCGGCAATGCCGGCGACGGGAGCAACAACATTCGCATTCTCGAGCAAATCGTCAGGATCATTCATTTTCTGATTGGAGAAATCCAAGACTCTGACGAATTGGTGAGATTGATGTTGAAGAAGAGCGGCGCCGGCGCCGGAGCCGGCGGTGGAGATTGCTTGGCTTCTCTGCTGCTTGTTCTCCAACAGGGAAGCGCCGAGTCTCGAATCGCCTCGGCTAGGGTTATGGAGTCGGTCGCCGTGAGCGCCGAGTCCAAGCTCTTGATCGCCGAGCGGGACGGAGTGTTGCCGGAATTGTTGAAATTAACGAGTCCGGAAAAAGATTCCACCCTAATCGAAGCCGGACTGTCGTGCCTCATCGCCGTTTCGGTGCCGAAACGCGTGAAGGTGAAACTAGTCCAACTCGGAGCCGTCAAGTCTCTGTCCAAATTGTTGTCGGACTCGAACTCCACGACGTCGACGATCGAGAAAGTTCTGAAGCTGCTCGAAACGGTGTCGTCGGTGAAGGAAGGGCGGGCGAAGATTTGCGAGGCGGTGGAGGAGGAAGGAGGCGACTGCTGCGTGTCGGCGATCGTGCAGAGACTTCTGAAGGCGTCGAGCTCGGCGACGGAGCACGCGGTGACGATTCTGTGGAGCGTGTGCTACTTGTTCAAGGAGCGATCGGCGCAGGAGGCGGTGACGAAGGCCAACGGGTTGACCAAGATTCTGCTGTTGATGCAGAGCAATTGCTCGCCGTGCGTCCGGCAAATGGCCGCCGATTTGCTTAAGATTTTCCGGGTGAATTCCAAGTCCACCATTTCGTGTTATGATACTAAGACCACTCATATTATGCCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005911 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030054 GO:0032446 GO:0033612 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0055044 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

U-box

Protein Analysis

407

Amino Acids

44.14

Weight (kDa)

8.52

Isoelectric Point (pI)

43.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	1 - 57	9.6e-12	U-box domain
ARM_PUB	PF25598	77 - 404	3.1e-73	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09800 AT5G64660
fragaria_vesca	FvH4_1g24000
malus_domestica	MD01G1010900.v1.1
prunus_persica	Prupe.6G159600_v2.0.a1
pyrus_communis	pycom01g03990 pycom1353g00040
rosa_chinensis	RchiOBHm_Chr2g0120131
rosa_laevigata	RLG00000018524
rosa_multiflora	Rmu_sc0016643.1_g000003
rosa_roxburghii	Rroxscaffold_2G00123700
rosa_rugosa	Rorug02G0227000
rosa_samantha	Rh2AG283600 Rh2BG294900 Rh2CG272300 Rh2DG308600
rosa_wichuraiana	Rw2G022710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	92
AatII	GACGTC	1 cut(s)	842
Acc36I	ACCTGC	1 cut(s)	92
AccB1I	GGYRCC	3 cut(s)	512, 518, 754
AccB7I	CCANNNNNTGG	1 cut(s)	232
AccBSI	CCGCTC	2 cut(s)	510, 658
AccI	GTMKAC	1 cut(s)	842
AccII	CGCG	4 cut(s)	45, 190, 765, 1001
AccIII	TCCGGA	1 cut(s)	697
AclWI	GGATC	1 cut(s)	449
AcoI	YGGCCR	2 cut(s)	285, 1134
AcsI	RAATTY	1 cut(s)	1165
AcuI	CTGAAG	2 cut(s)	881, 992
AcyI	GRCGYC	4 cut(s)	513, 519, 839, 977
AdeI	CACNNNGTG	1 cut(s)	1003
AfaI	GTAC	1 cut(s)	126
AfeI	AGCGCT	1 cut(s)	59
AfiI	CCNNNNNNNGG	4 cut(s)	232, 402, 603, 1132
AflII	CTTAAG	1 cut(s)	1148
AflIII	ACRYGT	1 cut(s)	763
AgsI	TTSAA	3 cut(s)	502, 685, 1036
AhlI	ACTAGT	1 cut(s)	778
AjnI	CCWGG	1 cut(s)	225
AluBI	AGCT	5 cut(s)	238, 264, 643, 865, 984
AluI	AGCT	5 cut(s)	238, 264, 643, 865, 984
Alw21I	GWGCWC	3 cut(s)	26, 986, 999
Alw26I	GTCTC	4 cut(s)	182, 591, 807, 958
Alw44I	GTGCAC	1 cut(s)	22
AlwI	GGATC	1 cut(s)	449
Ama87I	CYCGRG	1 cut(s)	425
Aor13HI	TCCGGA	1 cut(s)	697
Aor51HI	AGCGCT	1 cut(s)	59
AoxI	GGCC	3 cut(s)	285, 1068, 1134
ApaLI	GTGCAC	1 cut(s)	22
ApeKI	GCWGC	5 cut(s)	210, 361, 556, 865, 942
ApoI	RAATTY	1 cut(s)	1165
AspLEI	GCGC	9 cut(s)	47, 60, 190, 361, 515, 521, 581, 632, 1051
AspS9I	GGNCC	2 cut(s)	162, 253
AsuC2I	CCSGG	2 cut(s)	28, 1160
AsuHPI	GGTGA	7 cut(s)	25, 499, 784, 898, 1015, 1072, 1174
AsuII	TTCGAA	1 cut(s)	195
AvaI	CYCGRG	1 cut(s)	425
AvaII	GGWCC	2 cut(s)	162, 253
BaeGI	GKGCMC	1 cut(s)	26
BalI	TGGCCA	1 cut(s)	287
BanI	GGYRCC	3 cut(s)	512, 518, 754
BanII	GRGCYC	1 cut(s)	986
BauI	CACGAG	1 cut(s)	365
Bbv12I	GWGCWC	3 cut(s)	26, 986, 999
BbvI	GCAGC	5 cut(s)	222, 348, 543, 852, 929
BccI	CCATC	1 cut(s)	244
BceAI	ACGGC	6 cut(s)	88, 364, 608, 731, 779, 1102
BciT130I	CCWGG	1 cut(s)	227
BcnI	CCSGG	2 cut(s)	28, 1160
BcoDI	GTCTC	4 cut(s)	182, 591, 807, 958
BcuI	ACTAGT	1 cut(s)	778
BfaI	CTAG	2 cut(s)	603, 779
BfoI	RGCGCY	6 cut(s)	61, 362, 516, 522, 582, 633
BfrI	CTTAAG	1 cut(s)	1148
BfuAI	ACCTGC	1 cut(s)	92
BglII	AGATCT	1 cut(s)	156
BisI	GCNGC	9 cut(s)	211, 362, 385, 388, 511, 557, 866, 943, 1137
BlsI	GCNGC	9 cut(s)	212, 363, 386, 389, 512, 558, 867, 944, 1138
Bme1390I	CCNGG	3 cut(s)	28, 227, 1160
Bme18I	GGWCC	2 cut(s)	162, 253
BmeT110I	CYCGRG	1 cut(s)	425
BmgT120I	GGNCC	2 cut(s)	162, 253
BmiI	GGNNCC	5 cut(s)	514, 520, 526, 756, 793
BmrFI	CCNGG	3 cut(s)	28, 227, 1160
BmsI	GCATC	2 cut(s)	60, 1089
BplI	GAGNNNNNCTC	2 cut(s)	362, 394
Bpu14I	TTCGAA	1 cut(s)	195
BpuMI	CCSGG	2 cut(s)	28, 1160
BsaHI	GRCGYC	4 cut(s)	513, 519, 839, 977
BsaJI	CCNNGG	3 cut(s)	27, 306, 597
BsaWI	WCCGGW	1 cut(s)	697
BsaXI	ACNNNNNCTCC	2 cut(s)	815, 845
Bsc4I	CCNNNNNNNGG	4 cut(s)	232, 402, 603, 1132
Bse118I	RCCGGY	3 cut(s)	395, 515, 527
Bse3DI	GCAATG	1 cut(s)	397
BseAI	TCCGGA	1 cut(s)	697
BseBI	CCWGG	1 cut(s)	227
BseDI	CCNNGG	3 cut(s)	27, 306, 597
BseGI	GGATG	1 cut(s)	51
BseLI	CCNNNNNNNGG	4 cut(s)	232, 402, 603, 1132
BseMI	GCAATG	1 cut(s)	397
BseRI	GAGGAG	2 cut(s)	256, 938
BseSI	GKGCMC	1 cut(s)	26
BseXI	GCAGC	5 cut(s)	222, 348, 543, 852, 929
BsgI	GTGCAG	1 cut(s)	980
Bsh1236I	CGCG	4 cut(s)	45, 190, 765, 1001
Bsh1285I	CGRYCG	5 cut(s)	43, 621, 849, 957, 1046
BshFI	GGCC	3 cut(s)	287, 1070, 1136
BshNI	GGYRCC	3 cut(s)	512, 518, 754
BsiEI	CGRYCG	5 cut(s)	43, 621, 849, 957, 1046
BsiHKAI	GWGCWC	3 cut(s)	26, 986, 999
BsiHKCI	CYCGRG	1 cut(s)	425
BslFI	GGGAC	1 cut(s)	674
BslI	CCNNNNNNNGG	4 cut(s)	232, 402, 603, 1132
BsmAI	GTCTC	4 cut(s)	182, 591, 807, 958
BsmBI	CGTCTC	1 cut(s)	182
BsmFI	GGGAC	1 cut(s)	674
BsmI	GAATGC	1 cut(s)	420
BsnI	GGCC	3 cut(s)	287, 1070, 1136
BsoBI	CYCGRG	1 cut(s)	425
Bsp119I	TTCGAA	1 cut(s)	195
Bsp1286I	GDGCHC	3 cut(s)	26, 986, 999
Bsp13I	TCCGGA	1 cut(s)	697
Bsp143I	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
BspANI	GGCC	3 cut(s)	287, 1070, 1136
BspEI	TCCGGA	1 cut(s)	697
BspFNI	CGCG	4 cut(s)	45, 190, 765, 1001
BspLI	GGNNCC	5 cut(s)	514, 520, 526, 756, 793
BspMI	ACCTGC	1 cut(s)	92
BspPI	GGATC	1 cut(s)	449
BspQI	GCTCTTC	1 cut(s)	500
BspT104I	TTCGAA	1 cut(s)	195
BspT107I	GGYRCC	3 cut(s)	512, 518, 754
BspTI	CTTAAG	1 cut(s)	1148
BsrBI	CCGCTC	2 cut(s)	510, 658
BsrDI	GCAATG	1 cut(s)	397
BsrFI	RCCGGY	3 cut(s)	395, 515, 527
BssAI	RCCGGY	3 cut(s)	395, 515, 527
BssECI	CCNNGG	3 cut(s)	27, 306, 597
BssMI	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
BssNI	GRCGYC	4 cut(s)	513, 519, 839, 977
BssSI	CACGAG	1 cut(s)	365
BssT1I	CCWWGG	1 cut(s)	306
Bst2BI	CACGAG	1 cut(s)	365
Bst2UI	CCWGG	1 cut(s)	227
Bst4CI	ACNGT	2 cut(s)	732, 877
Bst6I	CTCTTC	3 cut(s)	115, 312, 500
BstACI	GRCGYC	4 cut(s)	513, 519, 839, 977
BstAFI	CTTAAG	1 cut(s)	1148
BstBI	TTCGAA	1 cut(s)	195
BstC8I	GCNNGC	9 cut(s)	49, 62, 285, 397, 517, 529, 900, 999, 1115
BstDEI	CTNAG	2 cut(s)	114, 1197
BstEII	GGTNACC	1 cut(s)	31
BstENI	CCTNNNNNAGG	1 cut(s)	601
BstF5I	GGATG	1 cut(s)	51
BstFNI	CGCG	4 cut(s)	45, 190, 765, 1001
BstH2I	RGCGCY	6 cut(s)	61, 362, 516, 522, 582, 633
BstHHI	GCGC	9 cut(s)	47, 60, 190, 361, 515, 521, 581, 632, 1051
BstKTI	GATC	6 cut(s)	159, 444, 651, 849, 957, 1046
BstMAI	GTCTC	4 cut(s)	182, 591, 807, 958
BstMBI	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
BstMCI	CGRYCG	5 cut(s)	43, 621, 849, 957, 1046
BstNI	CCWGG	1 cut(s)	227
BstPI	GGTNACC	1 cut(s)	31
BstSCI	CCNGG	3 cut(s)	26, 225, 1158
BstSLI	GKGCMC	1 cut(s)	26
BstUI	CGCG	4 cut(s)	45, 190, 765, 1001
BstV1I	GCAGC	5 cut(s)	222, 348, 543, 852, 929
BstX2I	RGATCY	1 cut(s)	156
BstYI	RGATCY	1 cut(s)	156
BsuRI	GGCC	3 cut(s)	287, 1070, 1136
BtgZI	GCGATG	1 cut(s)	727
BtsCI	GGATG	1 cut(s)	51
BveI	ACCTGC	1 cut(s)	92
Cac8I	GCNNGC	9 cut(s)	49, 62, 285, 397, 517, 529, 900, 999, 1115
CfoI	GCGC	9 cut(s)	47, 60, 190, 361, 515, 521, 581, 632, 1051
Cfr10I	RCCGGY	3 cut(s)	395, 515, 527
Cfr13I	GGNCC	2 cut(s)	162, 253
CseI	GACGC	3 cut(s)	164, 966, 1111
CsiI	ACCWGGT	1 cut(s)	225
Csp6I	GTAC	1 cut(s)	125
CviAII	CATG	1 cut(s)	97
CviQI	GTAC	1 cut(s)	125
DdeI	CTNAG	2 cut(s)	114, 1197
DinI	GGCGCC	2 cut(s)	514, 520
DpnI	GATC	6 cut(s)	158, 443, 650, 848, 956, 1045
DpnII	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
DraIII	CACNNNGTG	1 cut(s)	1003
EaeI	YGGCCR	2 cut(s)	285, 1134
Eam1104I	CTCTTC	3 cut(s)	115, 312, 500
EarI	CTCTTC	3 cut(s)	115, 312, 500
Ecl136II	GAGCTC	1 cut(s)	984
Eco130I	CCWWGG	1 cut(s)	306
Eco24I	GRGCYC	1 cut(s)	986
Eco47I	GGWCC	2 cut(s)	162, 253
Eco47III	AGCGCT	1 cut(s)	59
Eco53kI	GAGCTC	1 cut(s)	984
Eco57I	CTGAAG	2 cut(s)	881, 992
Eco88I	CYCGRG	1 cut(s)	425
Eco91I	GGTNACC	1 cut(s)	31
EcoICRI	GAGCTC	1 cut(s)	984
EcoNI	CCTNNNNNAGG	1 cut(s)	601
EcoO65I	GGTNACC	1 cut(s)	31
EcoRI	GAATTC	1 cut(s)	1165
EcoRII	CCWGG	1 cut(s)	225
EcoT14I	CCWWGG	1 cut(s)	306
EcoT38I	GRGCYC	1 cut(s)	986
EgeI	GGCGCC	2 cut(s)	514, 520
EheI	GGCGCC	2 cut(s)	514, 520
ErhI	CCWWGG	1 cut(s)	306
Esp3I	CGTCTC	1 cut(s)	182
FaeI	CATG	1 cut(s)	100
FaiI	YATR	6 cut(s)	98, 152, 611, 1191, 1209, 1214
FaqI	GGGAC	1 cut(s)	674
FatI	CATG	1 cut(s)	96
FauI	CCCGC	3 cut(s)	97, 651, 891
FblI	GTMKAC	1 cut(s)	842
Fnu4HI	GCNGC	9 cut(s)	211, 362, 385, 388, 511, 557, 866, 943, 1137
FokI	GGATG	1 cut(s)	38
FriOI	GRGCYC	1 cut(s)	986
Fsp4HI	GCNGC	9 cut(s)	211, 362, 385, 388, 511, 557, 866, 943, 1137
FspBI	CTAG	2 cut(s)	603, 779
GlaI	GCGC	9 cut(s)	46, 59, 189, 360, 514, 520, 580, 631, 1050
GluI	GCNGC	9 cut(s)	211, 362, 385, 388, 511, 557, 866, 943, 1137
HaeII	RGCGCY	6 cut(s)	61, 362, 516, 522, 582, 633
HaeIII	GGCC	3 cut(s)	287, 1070, 1136
HgaI	GACGC	3 cut(s)	164, 966, 1111
HhaI	GCGC	9 cut(s)	47, 60, 190, 361, 515, 521, 581, 632, 1051
Hin1I	GRCGYC	4 cut(s)	513, 519, 839, 977
Hin1II	CATG	1 cut(s)	100
Hin6I	GCGC	9 cut(s)	45, 58, 188, 359, 513, 519, 579, 630, 1049
HinP1I	GCGC	9 cut(s)	45, 58, 188, 359, 513, 519, 579, 630, 1049
HincII	GTYRAC	2 cut(s)	843, 1080
HindII	GTYRAC	2 cut(s)	843, 1080
HphI	GGTGA	7 cut(s)	25, 499, 784, 898, 1015, 1072, 1174
Hpy166II	GTNNAC	4 cut(s)	24, 843, 1080, 1176
Hpy188I	TCNGA	9 cut(s)	166, 182, 316, 456, 478, 791, 823, 861, 972
Hpy188III	TCNNGA	6 cut(s)	425, 439, 588, 646, 698, 850
Hpy8I	GTNNAC	4 cut(s)	24, 843, 1080, 1176
Hpy99I	CGWCG	9 cut(s)	74, 350, 404, 841, 844, 847, 886, 982, 994
HpyAV	CCTTC	6 cut(s)	763, 883, 887, 923, 967, 1060
HpyCH4III	ACNGT	2 cut(s)	732, 877
HpyCH4IV	ACGT	1 cut(s)	839
HpyCH4V	TGCA	4 cut(s)	24, 100, 961, 1102
HpyF3I	CTNAG	2 cut(s)	114, 1197
HpySE526I	ACGT	1 cut(s)	839
Hsp92I	GRCGYC	4 cut(s)	513, 519, 839, 977
Hsp92II	CATG	1 cut(s)	100
HspAI	GCGC	9 cut(s)	45, 58, 188, 359, 513, 519, 579, 630, 1049
KasI	GGCGCC	2 cut(s)	512, 518
Kpn2I	TCCGGA	1 cut(s)	697
KroI	GCCGGC	3 cut(s)	395, 515, 527
KroNI	GCCGGC	3 cut(s)	397, 517, 529
Kzo9I	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
LguI	GCTCTTC	1 cut(s)	500
LmnI	GCTCC	8 cut(s)	235, 269, 405, 524, 791, 994, 1017, 1039
Lsp1109I	GCAGC	5 cut(s)	222, 348, 543, 852, 929
LweI	GCATC	2 cut(s)	60, 1089
MabI	ACCWGGT	1 cut(s)	225
MaeI	CTAG	2 cut(s)	603, 779
MaeII	ACGT	1 cut(s)	839
MaeIII	GTNAC	3 cut(s)	31, 1003, 1060
MalI	GATC	6 cut(s)	158, 443, 650, 848, 956, 1045
MbiI	CCGCTC	2 cut(s)	510, 658
MboI	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
MboII	GAAGA	5 cut(s)	102, 329, 514, 517, 916
MfeI	CAATTG	1 cut(s)	1108
MflI	RGATCY	1 cut(s)	156
MhlI	GDGCHC	3 cut(s)	26, 986, 999
MlsI	TGGCCA	1 cut(s)	287
MluCI	AATT	6 cut(s)	482, 677, 686, 812, 1108, 1165
MluI	ACGCGT	1 cut(s)	763
MluNI	TGGCCA	1 cut(s)	287
Mly113I	GGCGCC	2 cut(s)	513, 519
MlyI	GAGTC	7 cut(s)	320, 467, 593, 623, 644, 703, 818
MmeI	TCCRAC	4 cut(s)	294, 592, 801, 808
Mox20I	TGGCCA	1 cut(s)	287
MreI	CGCCGGCG	1 cut(s)	515
MroI	TCCGGA	1 cut(s)	697
MroNI	GCCGGC	3 cut(s)	395, 515, 527
MscI	TGGCCA	1 cut(s)	287
MseI	TTAA	2 cut(s)	689, 1149
Msp20I	TGGCCA	1 cut(s)	287
MspCI	CTTAAG	1 cut(s)	1148
MspR9I	CCNGG	3 cut(s)	28, 227, 1160
MunI	CAATTG	1 cut(s)	1108
Mva1269I	GAATGC	1 cut(s)	420
MvaI	CCWGG	1 cut(s)	227
MvnI	CGCG	4 cut(s)	45, 190, 765, 1001
NaeI	GCCGGC	3 cut(s)	397, 517, 529
NarI	GGCGCC	2 cut(s)	513, 519
NciI	CCSGG	2 cut(s)	28, 1160
NdeII	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
NgoMIV	GCCGGC	3 cut(s)	395, 515, 527
NlaIII	CATG	1 cut(s)	100
NlaIV	GGNNCC	5 cut(s)	514, 520, 526, 756, 793
NmeAIII	GCCGAG	5 cut(s)	578, 607, 658, 679, 965
NmuCI	GTSAC	3 cut(s)	31, 1003, 1060
NspV	TTCGAA	1 cut(s)	195
PaeR7I	CTCGAG	1 cut(s)	425
PaqCI	CACCTGC	1 cut(s)	92
PciSI	GCTCTTC	1 cut(s)	500
PcsI	WCGNNNNNNNCGW	5 cut(s)	342, 432, 833, 842, 986
PctI	GAATGC	1 cut(s)	420
PdiI	GCCGGC	3 cut(s)	397, 517, 529
PfeI	GAWTC	8 cut(s)	167, 192, 241, 278, 591, 707, 1009, 1087
PflMI	CCANNNNNTGG	1 cut(s)	232
PkrI	GCNGC	9 cut(s)	212, 363, 386, 389, 512, 558, 867, 944, 1138
Ple19I	CGATCG	3 cut(s)	849, 957, 1046
PleI	GAGTC	7 cut(s)	319, 467, 592, 622, 643, 702, 818
PluTI	GGCGCC	2 cut(s)	516, 522
PpsI	GAGTC	7 cut(s)	319, 467, 592, 622, 643, 702, 818
Psp124BI	GAGCTC	1 cut(s)	986
Psp6I	CCWGG	1 cut(s)	225
PspEI	GGTNACC	1 cut(s)	31
PspGI	CCWGG	1 cut(s)	225
PspN4I	GGNNCC	5 cut(s)	514, 520, 526, 756, 793
PspPI	GGNCC	2 cut(s)	162, 253
PsuI	RGATCY	1 cut(s)	156
PvuI	CGATCG	3 cut(s)	849, 957, 1046
RsaI	GTAC	1 cut(s)	126
RsaNI	GTAC	1 cut(s)	125
SacI	GAGCTC	1 cut(s)	986
SalI	GTCGAC	1 cut(s)	841
SapI	GCTCTTC	1 cut(s)	500
SaqAI	TTAA	2 cut(s)	689, 1149
SatI	GCNGC	9 cut(s)	211, 362, 385, 388, 511, 557, 866, 943, 1137
Sau3AI	GATC	6 cut(s)	156, 441, 648, 846, 954, 1043
Sau96I	GGNCC	2 cut(s)	162, 253
SchI	GAGTC	7 cut(s)	320, 467, 593, 623, 644, 703, 818
ScrFI	CCNGG	3 cut(s)	28, 227, 1160
SduI	GDGCHC	3 cut(s)	26, 986, 999
SexAI	ACCWGGT	1 cut(s)	225
SfaNI	GCATC	2 cut(s)	60, 1089
SfoI	GGCGCC	2 cut(s)	514, 520
Sfr274I	CTCGAG	1 cut(s)	425
SfuI	TTCGAA	1 cut(s)	195
SgrAI	CRCCGGYG	1 cut(s)	515
SgrDI	CGTCGACG	1 cut(s)	841
SinI	GGWCC	2 cut(s)	162, 253
SlaI	CTCGAG	1 cut(s)	425
SmlI	CTYRAG	2 cut(s)	425, 1148
SmoI	CTYRAG	2 cut(s)	425, 1148
SpeI	ACTAGT	1 cut(s)	778
Sse9I	AATT	6 cut(s)	482, 677, 686, 812, 1108, 1165
SspDI	GGCGCC	2 cut(s)	512, 518
SspMI	CTAG	2 cut(s)	603, 779
SstI	GAGCTC	1 cut(s)	986
StyD4I	CCNGG	3 cut(s)	26, 225, 1158
StyI	CCWWGG	1 cut(s)	306
TaaI	ACNGT	2 cut(s)	732, 877
TaiI	ACGT	1 cut(s)	842
TaqI	TCGA	9 cut(s)	195, 426, 589, 720, 827, 842, 849, 870, 980
TaqII	GACCGA	1 cut(s)	607
TasI	AATT	6 cut(s)	482, 677, 686, 812, 1108, 1165
TauI	GCSGC	4 cut(s)	387, 390, 513, 1139
TfiI	GAWTC	8 cut(s)	167, 192, 241, 278, 591, 707, 1009, 1087
Tru1I	TTAA	2 cut(s)	689, 1149
Tru9I	TTAA	2 cut(s)	689, 1149
TseFI	GTSAC	3 cut(s)	31, 1003, 1060
TseI	GCWGC	5 cut(s)	210, 361, 556, 865, 942
Tsp45I	GTSAC	3 cut(s)	31, 1003, 1060
TspDTI	ATGAA	2 cut(s)	17, 437
TspGWI	ACGGA	2 cut(s)	678, 1007
Van91I	CCANNNNNTGG	1 cut(s)	232
Vha464I	CTTAAG	1 cut(s)	1148
VneI	GTGCAC	1 cut(s)	22
VpaK11BI	GGWCC	2 cut(s)	162, 253
XagI	CCTNNNNNAGG	1 cut(s)	601
XapI	RAATTY	1 cut(s)	1165
XcmI	CCANNNNNNNNNTGG	1 cut(s)	226
XhoI	CTCGAG	1 cut(s)	425
XmiI	GTMKAC	1 cut(s)	842
XspI	CTAG	2 cut(s)	603, 779
ZraI	GACGTC	1 cut(s)	840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.