RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G09800 AT5G64660 |
| fragaria_vesca | FvH4_1g24000 |
| malus_domestica | MD01G1010900.v1.1 |
| prunus_persica | Prupe.6G159600_v2.0.a1 |
| pyrus_communis | pycom01g03990 pycom1353g00040 |
| rosa_chinensis | RchiOBHm_Chr2g0120131 |
| rosa_laevigata | RLG00000018524 |
| rosa_multiflora | Rmu_sc0016643.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00123700 |
| rosa_rugosa | Rorug02G0227000 |
| rosa_samantha | Rh2AG283600 Rh2BG294900 Rh2CG272300 Rh2DG308600 |
| rosa_wichuraiana | Rw2G022710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 158 |
| Acc36I | ACCTGC | 1 cut(s) | 158 |
| AccB1I | GGYRCC | 5 cut(s) | 28, 45, 578, 805, 842 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 298 |
| AccBSI | CCGCTC | 2 cut(s) | 576, 709 |
| AccII | CGCG | 3 cut(s) | 111, 256, 1049 |
| AccIII | TCCGGA | 1 cut(s) | 748 |
| AclWI | GGATC | 1 cut(s) | 515 |
| AcoI | YGGCCR | 1 cut(s) | 351 |
| AcsI | RAATTY | 1 cut(s) | 1213 |
| AcuI | CTGAAG | 2 cut(s) | 932, 1040 |
| AcyI | GRCGYC | 3 cut(s) | 579, 843, 1025 |
| AdeI | CACNNNGTG | 1 cut(s) | 1051 |
| AfaI | GTAC | 1 cut(s) | 192 |
| AfeI | AGCGCT | 1 cut(s) | 125 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 298, 468, 654 |
| AflII | CTTAAG | 1 cut(s) | 1196 |
| AgsI | TTSAA | 3 cut(s) | 568, 736, 1084 |
| AhlI | ACTAGT | 1 cut(s) | 829 |
| AjiI | CACGTC | 1 cut(s) | 64 |
| AjnI | CCWGG | 1 cut(s) | 291 |
| AluBI | AGCT | 6 cut(s) | 36, 304, 330, 694, 916, 1032 |
| AluI | AGCT | 6 cut(s) | 36, 304, 330, 694, 916, 1032 |
| Alw21I | GWGCWC | 2 cut(s) | 1034, 1047 |
| Alw26I | GTCTC | 4 cut(s) | 248, 642, 858, 1006 |
| AlwI | GGATC | 1 cut(s) | 515 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1015 |
| Ama87I | CYCGRG | 1 cut(s) | 491 |
| Aor13HI | TCCGGA | 1 cut(s) | 748 |
| Aor51HI | AGCGCT | 1 cut(s) | 125 |
| AoxI | GGCC | 2 cut(s) | 351, 1116 |
| ApeKI | GCWGC | 5 cut(s) | 276, 427, 607, 916, 990 |
| ApoI | RAATTY | 1 cut(s) | 1213 |
| AspLEI | GCGC | 9 cut(s) | 113, 126, 256, 427, 581, 632, 683, 845, 1099 |
| AspS9I | GGNCC | 2 cut(s) | 228, 319 |
| AsuC2I | CCSGG | 2 cut(s) | 94, 1208 |
| AsuHPI | GGTGA | 7 cut(s) | 91, 565, 835, 949, 1063, 1120, 1222 |
| AvaI | CYCGRG | 1 cut(s) | 491 |
| AvaII | GGWCC | 2 cut(s) | 228, 319 |
| BaeGI | GKGCMC | 1 cut(s) | 50 |
| BalI | TGGCCA | 1 cut(s) | 353 |
| BanI | GGYRCC | 5 cut(s) | 28, 45, 578, 805, 842 |
| BanII | GRGCYC | 1 cut(s) | 1034 |
| BauI | CACGAG | 1 cut(s) | 431 |
| Bbv12I | GWGCWC | 2 cut(s) | 1034, 1047 |
| BbvI | GCAGC | 5 cut(s) | 288, 414, 594, 903, 977 |
| BccI | CCATC | 1 cut(s) | 310 |
| BceAI | ACGGC | 5 cut(s) | 154, 430, 659, 782, 830 |
| BciT130I | CCWGG | 1 cut(s) | 293 |
| BcnI | CCSGG | 2 cut(s) | 94, 1208 |
| BcoDI | GTCTC | 4 cut(s) | 248, 642, 858, 1006 |
| BcuI | ACTAGT | 1 cut(s) | 829 |
| BfaI | CTAG | 2 cut(s) | 654, 830 |
| BfoI | RGCGCY | 6 cut(s) | 127, 428, 582, 633, 684, 846 |
| BfrI | CTTAAG | 1 cut(s) | 1196 |
| BfuAI | ACCTGC | 1 cut(s) | 158 |
| BglII | AGATCT | 1 cut(s) | 222 |
| BisI | GCNGC | 8 cut(s) | 277, 428, 451, 454, 577, 608, 917, 991 |
| BlsI | GCNGC | 8 cut(s) | 278, 429, 452, 455, 578, 609, 918, 992 |
| Bme1390I | CCNGG | 3 cut(s) | 94, 293, 1208 |
| Bme18I | GGWCC | 2 cut(s) | 228, 319 |
| BmeT110I | CYCGRG | 1 cut(s) | 491 |
| BmgBI | CACGTC | 1 cut(s) | 64 |
| BmgT120I | GGNCC | 2 cut(s) | 228, 319 |
| BmiI | GGNNCC | 5 cut(s) | 30, 47, 580, 807, 844 |
| BmrFI | CCNGG | 3 cut(s) | 94, 293, 1208 |
| BmsI | GCATC | 2 cut(s) | 126, 1137 |
| BpuMI | CCSGG | 2 cut(s) | 94, 1208 |
| BsaHI | GRCGYC | 3 cut(s) | 579, 843, 1025 |
| BsaJI | CCNNGG | 3 cut(s) | 93, 372, 648 |
| BsaWI | WCCGGW | 2 cut(s) | 42, 748 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 314, 344, 866, 896 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 298, 468, 654 |
| Bse118I | RCCGGY | 3 cut(s) | 446, 461, 581 |
| Bse3DI | GCAATG | 1 cut(s) | 463 |
| BseAI | TCCGGA | 1 cut(s) | 748 |
| BseBI | CCWGG | 1 cut(s) | 293 |
| BseDI | CCNNGG | 3 cut(s) | 93, 372, 648 |
| BseGI | GGATG | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 298, 468, 654 |
| BseMI | GCAATG | 1 cut(s) | 463 |
| BseRI | GAGGAG | 2 cut(s) | 322, 986 |
| BseSI | GKGCMC | 1 cut(s) | 50 |
| BseXI | GCAGC | 5 cut(s) | 288, 414, 594, 903, 977 |
| BsgI | GTGCAG | 2 cut(s) | 73, 1028 |
| Bsh1236I | CGCG | 3 cut(s) | 111, 256, 1049 |
| Bsh1285I | CGRYCG | 5 cut(s) | 109, 672, 900, 1005, 1094 |
| BshFI | GGCC | 2 cut(s) | 353, 1118 |
| BshNI | GGYRCC | 5 cut(s) | 28, 45, 578, 805, 842 |
| BsiEI | CGRYCG | 5 cut(s) | 109, 672, 900, 1005, 1094 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1034, 1047 |
| BsiHKCI | CYCGRG | 1 cut(s) | 491 |
| BslFI | GGGAC | 2 cut(s) | 23, 725 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 298, 468, 654 |
| BsmAI | GTCTC | 4 cut(s) | 248, 642, 858, 1006 |
| BsmBI | CGTCTC | 1 cut(s) | 248 |
| BsmFI | GGGAC | 2 cut(s) | 23, 725 |
| BsmI | GAATGC | 1 cut(s) | 486 |
| BsnI | GGCC | 2 cut(s) | 353, 1118 |
| BsoBI | CYCGRG | 1 cut(s) | 491 |
| Bsp1286I | GDGCHC | 3 cut(s) | 50, 1034, 1047 |
| Bsp13I | TCCGGA | 1 cut(s) | 748 |
| Bsp143I | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| BspANI | GGCC | 2 cut(s) | 353, 1118 |
| BspEI | TCCGGA | 1 cut(s) | 748 |
| BspFNI | CGCG | 3 cut(s) | 111, 256, 1049 |
| BspLI | GGNNCC | 5 cut(s) | 30, 47, 580, 807, 844 |
| BspMI | ACCTGC | 1 cut(s) | 158 |
| BspPI | GGATC | 1 cut(s) | 515 |
| BspQI | GCTCTTC | 1 cut(s) | 566 |
| BspT107I | GGYRCC | 5 cut(s) | 28, 45, 578, 805, 842 |
| BspTI | CTTAAG | 1 cut(s) | 1196 |
| BsrBI | CCGCTC | 2 cut(s) | 576, 709 |
| BsrDI | GCAATG | 1 cut(s) | 463 |
| BsrFI | RCCGGY | 3 cut(s) | 446, 461, 581 |
| BssAI | RCCGGY | 3 cut(s) | 446, 461, 581 |
| BssECI | CCNNGG | 3 cut(s) | 93, 372, 648 |
| BssMI | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| BssNI | GRCGYC | 3 cut(s) | 579, 843, 1025 |
| BssSI | CACGAG | 1 cut(s) | 431 |
| BssT1I | CCWWGG | 1 cut(s) | 372 |
| Bst2BI | CACGAG | 1 cut(s) | 431 |
| Bst2UI | CCWGG | 1 cut(s) | 293 |
| Bst4CI | ACNGT | 3 cut(s) | 28, 783, 928 |
| Bst6I | CTCTTC | 3 cut(s) | 181, 378, 566 |
| BstACI | GRCGYC | 3 cut(s) | 579, 843, 1025 |
| BstAFI | CTTAAG | 1 cut(s) | 1196 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1015 |
| BstC8I | GCNNGC | 8 cut(s) | 115, 128, 351, 448, 463, 583, 951, 1047 |
| BstDEI | CTNAG | 2 cut(s) | 180, 1245 |
| BstEII | GGTNACC | 1 cut(s) | 97 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 652 |
| BstF5I | GGATG | 1 cut(s) | 117 |
| BstFNI | CGCG | 3 cut(s) | 111, 256, 1049 |
| BstH2I | RGCGCY | 6 cut(s) | 127, 428, 582, 633, 684, 846 |
| BstHHI | GCGC | 9 cut(s) | 113, 126, 256, 427, 581, 632, 683, 845, 1099 |
| BstKTI | GATC | 7 cut(s) | 225, 510, 672, 702, 900, 1005, 1094 |
| BstMAI | GTCTC | 4 cut(s) | 248, 642, 858, 1006 |
| BstMBI | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| BstMCI | CGRYCG | 5 cut(s) | 109, 672, 900, 1005, 1094 |
| BstNI | CCWGG | 1 cut(s) | 293 |
| BstPI | GGTNACC | 1 cut(s) | 97 |
| BstSCI | CCNGG | 3 cut(s) | 92, 291, 1206 |
| BstSLI | GKGCMC | 1 cut(s) | 50 |
| BstUI | CGCG | 3 cut(s) | 111, 256, 1049 |
| BstV1I | GCAGC | 5 cut(s) | 288, 414, 594, 903, 977 |
| BstX2I | RGATCY | 1 cut(s) | 222 |
| BstYI | RGATCY | 1 cut(s) | 222 |
| BsuRI | GGCC | 2 cut(s) | 353, 1118 |
| BtgZI | GCGATG | 1 cut(s) | 778 |
| BtrI | CACGTC | 1 cut(s) | 64 |
| BtsCI | GGATG | 1 cut(s) | 117 |
| BveI | ACCTGC | 1 cut(s) | 158 |
| Cac8I | GCNNGC | 8 cut(s) | 115, 128, 351, 448, 463, 583, 951, 1047 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1015 |
| CfoI | GCGC | 9 cut(s) | 113, 126, 256, 427, 581, 632, 683, 845, 1099 |
| Cfr10I | RCCGGY | 3 cut(s) | 446, 461, 581 |
| Cfr13I | GGNCC | 2 cut(s) | 228, 319 |
| CseI | GACGC | 3 cut(s) | 230, 1014, 1159 |
| CsiI | ACCWGGT | 1 cut(s) | 291 |
| Csp6I | GTAC | 1 cut(s) | 191 |
| CviAII | CATG | 1 cut(s) | 163 |
| CviQI | GTAC | 1 cut(s) | 191 |
| DdeI | CTNAG | 2 cut(s) | 180, 1245 |
| DinI | GGCGCC | 2 cut(s) | 580, 844 |
| DpnI | GATC | 7 cut(s) | 224, 509, 671, 701, 899, 1004, 1093 |
| DpnII | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| DraIII | CACNNNGTG | 1 cut(s) | 1051 |
| EaeI | YGGCCR | 1 cut(s) | 351 |
| Eam1104I | CTCTTC | 3 cut(s) | 181, 378, 566 |
| EarI | CTCTTC | 3 cut(s) | 181, 378, 566 |
| EciI | GGCGGA | 2 cut(s) | 600, 1174 |
| Ecl136II | GAGCTC | 1 cut(s) | 1032 |
| Eco130I | CCWWGG | 1 cut(s) | 372 |
| Eco24I | GRGCYC | 1 cut(s) | 1034 |
| Eco47I | GGWCC | 2 cut(s) | 228, 319 |
| Eco47III | AGCGCT | 1 cut(s) | 125 |
| Eco53kI | GAGCTC | 1 cut(s) | 1032 |
| Eco57I | CTGAAG | 2 cut(s) | 932, 1040 |
| Eco88I | CYCGRG | 1 cut(s) | 491 |
| Eco91I | GGTNACC | 1 cut(s) | 97 |
| EcoICRI | GAGCTC | 1 cut(s) | 1032 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 652 |
| EcoO65I | GGTNACC | 1 cut(s) | 97 |
| EcoRI | GAATTC | 1 cut(s) | 1213 |
| EcoRII | CCWGG | 1 cut(s) | 291 |
| EcoT14I | CCWWGG | 1 cut(s) | 372 |
| EcoT38I | GRGCYC | 1 cut(s) | 1034 |
| EgeI | GGCGCC | 2 cut(s) | 580, 844 |
| EheI | GGCGCC | 2 cut(s) | 580, 844 |
| ErhI | CCWWGG | 1 cut(s) | 372 |
| Esp3I | CGTCTC | 1 cut(s) | 248 |
| FaeI | CATG | 1 cut(s) | 166 |
| FaiI | YATR | 6 cut(s) | 164, 218, 662, 1239, 1257, 1262 |
| FaqI | GGGAC | 2 cut(s) | 23, 725 |
| FatI | CATG | 1 cut(s) | 162 |
| FauI | CCCGC | 3 cut(s) | 163, 702, 942 |
| Fnu4HI | GCNGC | 8 cut(s) | 277, 428, 451, 454, 577, 608, 917, 991 |
| FokI | GGATG | 1 cut(s) | 104 |
| FriOI | GRGCYC | 1 cut(s) | 1034 |
| Fsp4HI | GCNGC | 8 cut(s) | 277, 428, 451, 454, 577, 608, 917, 991 |
| FspBI | CTAG | 2 cut(s) | 654, 830 |
| GlaI | GCGC | 9 cut(s) | 112, 125, 255, 426, 580, 631, 682, 844, 1098 |
| GluI | GCNGC | 8 cut(s) | 277, 428, 451, 454, 577, 608, 917, 991 |
| HaeII | RGCGCY | 6 cut(s) | 127, 428, 582, 633, 684, 846 |
| HaeIII | GGCC | 2 cut(s) | 353, 1118 |
| HgaI | GACGC | 3 cut(s) | 230, 1014, 1159 |
| HhaI | GCGC | 9 cut(s) | 113, 126, 256, 427, 581, 632, 683, 845, 1099 |
| Hin1I | GRCGYC | 3 cut(s) | 579, 843, 1025 |
| Hin1II | CATG | 1 cut(s) | 166 |
| Hin6I | GCGC | 9 cut(s) | 111, 124, 254, 425, 579, 630, 681, 843, 1097 |
| HinP1I | GCGC | 9 cut(s) | 111, 124, 254, 425, 579, 630, 681, 843, 1097 |
| HincII | GTYRAC | 2 cut(s) | 894, 1128 |
| HindII | GTYRAC | 2 cut(s) | 894, 1128 |
| HphI | GGTGA | 7 cut(s) | 91, 565, 835, 949, 1063, 1120, 1222 |
| Hpy166II | GTNNAC | 3 cut(s) | 894, 1128, 1224 |
| Hpy188I | TCNGA | 7 cut(s) | 232, 248, 382, 522, 544, 874, 912 |
| Hpy188III | TCNNGA | 7 cut(s) | 262, 491, 505, 639, 697, 749, 901 |
| Hpy8I | GTNNAC | 3 cut(s) | 894, 1128, 1224 |
| Hpy99I | CGWCG | 7 cut(s) | 140, 416, 470, 892, 937, 1030, 1042 |
| HpyAV | CCTTC | 6 cut(s) | 814, 934, 938, 971, 1015, 1108 |
| HpyCH4III | ACNGT | 3 cut(s) | 28, 783, 928 |
| HpyCH4IV | ACGT | 2 cut(s) | 63, 890 |
| HpyCH4V | TGCA | 4 cut(s) | 90, 166, 1009, 1150 |
| HpyF3I | CTNAG | 2 cut(s) | 180, 1245 |
| HpySE526I | ACGT | 2 cut(s) | 63, 890 |
| Hsp92I | GRCGYC | 3 cut(s) | 579, 843, 1025 |
| Hsp92II | CATG | 1 cut(s) | 166 |
| HspAI | GCGC | 9 cut(s) | 111, 124, 254, 425, 579, 630, 681, 843, 1097 |
| KasI | GGCGCC | 2 cut(s) | 578, 842 |
| Kpn2I | TCCGGA | 1 cut(s) | 748 |
| KroI | GCCGGC | 3 cut(s) | 446, 461, 581 |
| KroNI | GCCGGC | 3 cut(s) | 448, 463, 583 |
| Kzo9I | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| LguI | GCTCTTC | 1 cut(s) | 566 |
| LmnI | GCTCC | 6 cut(s) | 301, 335, 471, 1042, 1065, 1087 |
| Lsp1109I | GCAGC | 5 cut(s) | 288, 414, 594, 903, 977 |
| LweI | GCATC | 2 cut(s) | 126, 1137 |
| MabI | ACCWGGT | 1 cut(s) | 291 |
| MaeI | CTAG | 2 cut(s) | 654, 830 |
| MaeII | ACGT | 2 cut(s) | 63, 890 |
| MaeIII | GTNAC | 3 cut(s) | 97, 1051, 1108 |
| MalI | GATC | 7 cut(s) | 224, 509, 671, 701, 899, 1004, 1093 |
| MbiI | CCGCTC | 2 cut(s) | 576, 709 |
| MboI | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| MboII | GAAGA | 5 cut(s) | 168, 395, 580, 583, 967 |
| MfeI | CAATTG | 1 cut(s) | 1156 |
| MflI | RGATCY | 1 cut(s) | 222 |
| MhlI | GDGCHC | 3 cut(s) | 50, 1034, 1047 |
| MlsI | TGGCCA | 1 cut(s) | 353 |
| MluCI | AATT | 6 cut(s) | 548, 728, 737, 863, 1156, 1213 |
| MluNI | TGGCCA | 1 cut(s) | 353 |
| Mly113I | GGCGCC | 2 cut(s) | 579, 843 |
| MlyI | GAGTC | 7 cut(s) | 386, 533, 644, 674, 695, 754, 869 |
| MmeI | TCCRAC | 4 cut(s) | 360, 643, 852, 859 |
| Mox20I | TGGCCA | 1 cut(s) | 353 |
| MreI | CGCCGGCG | 2 cut(s) | 446, 581 |
| MroI | TCCGGA | 1 cut(s) | 748 |
| MroNI | GCCGGC | 3 cut(s) | 446, 461, 581 |
| MscI | TGGCCA | 1 cut(s) | 353 |
| MseI | TTAA | 2 cut(s) | 740, 1197 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| Msp20I | TGGCCA | 1 cut(s) | 353 |
| MspCI | CTTAAG | 1 cut(s) | 1196 |
| MspR9I | CCNGG | 3 cut(s) | 94, 293, 1208 |
| MunI | CAATTG | 1 cut(s) | 1156 |
| Mva1269I | GAATGC | 1 cut(s) | 486 |
| MvaI | CCWGG | 1 cut(s) | 293 |
| MvnI | CGCG | 3 cut(s) | 111, 256, 1049 |
| NaeI | GCCGGC | 3 cut(s) | 448, 463, 583 |
| NarI | GGCGCC | 2 cut(s) | 579, 843 |
| NciI | CCSGG | 2 cut(s) | 94, 1208 |
| NdeII | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| NgoMIV | GCCGGC | 3 cut(s) | 446, 461, 581 |
| NlaIII | CATG | 1 cut(s) | 166 |
| NlaIV | GGNNCC | 5 cut(s) | 30, 47, 580, 807, 844 |
| NmeAIII | GCCGAG | 7 cut(s) | 57, 629, 658, 709, 730, 819, 1013 |
| NmuCI | GTSAC | 3 cut(s) | 97, 1051, 1108 |
| PaeR7I | CTCGAG | 1 cut(s) | 491 |
| PaqCI | CACCTGC | 1 cut(s) | 158 |
| PciSI | GCTCTTC | 1 cut(s) | 566 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 408, 498, 884, 893, 1034 |
| PctI | GAATGC | 1 cut(s) | 486 |
| PdiI | GCCGGC | 3 cut(s) | 448, 463, 583 |
| PfeI | GAWTC | 8 cut(s) | 233, 258, 307, 344, 642, 758, 1057, 1135 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 298 |
| PkrI | GCNGC | 8 cut(s) | 278, 429, 452, 455, 578, 609, 918, 992 |
| Ple19I | CGATCG | 4 cut(s) | 672, 900, 1005, 1094 |
| PleI | GAGTC | 7 cut(s) | 385, 533, 643, 673, 694, 753, 869 |
| PluTI | GGCGCC | 2 cut(s) | 582, 846 |
| PpsI | GAGTC | 7 cut(s) | 385, 533, 643, 673, 694, 753, 869 |
| Psp124BI | GAGCTC | 1 cut(s) | 1034 |
| Psp6I | CCWGG | 1 cut(s) | 291 |
| PspEI | GGTNACC | 1 cut(s) | 97 |
| PspGI | CCWGG | 1 cut(s) | 291 |
| PspN4I | GGNNCC | 5 cut(s) | 30, 47, 580, 807, 844 |
| PspPI | GGNCC | 2 cut(s) | 228, 319 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1015 |
| PsuI | RGATCY | 1 cut(s) | 222 |
| PvuI | CGATCG | 4 cut(s) | 672, 900, 1005, 1094 |
| RsaI | GTAC | 1 cut(s) | 192 |
| RsaNI | GTAC | 1 cut(s) | 191 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SacI | GAGCTC | 1 cut(s) | 1034 |
| SapI | GCTCTTC | 1 cut(s) | 566 |
| SaqAI | TTAA | 2 cut(s) | 740, 1197 |
| SatI | GCNGC | 8 cut(s) | 277, 428, 451, 454, 577, 608, 917, 991 |
| Sau3AI | GATC | 7 cut(s) | 222, 507, 669, 699, 897, 1002, 1091 |
| Sau96I | GGNCC | 2 cut(s) | 228, 319 |
| SchI | GAGTC | 7 cut(s) | 386, 533, 644, 674, 695, 754, 869 |
| ScrFI | CCNGG | 3 cut(s) | 94, 293, 1208 |
| SduI | GDGCHC | 3 cut(s) | 50, 1034, 1047 |
| SexAI | ACCWGGT | 1 cut(s) | 291 |
| SfaNI | GCATC | 2 cut(s) | 126, 1137 |
| SfoI | GGCGCC | 2 cut(s) | 580, 844 |
| Sfr274I | CTCGAG | 1 cut(s) | 491 |
| SgrAI | CRCCGGYG | 2 cut(s) | 446, 581 |
| SinI | GGWCC | 2 cut(s) | 228, 319 |
| SlaI | CTCGAG | 1 cut(s) | 491 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| SmlI | CTYRAG | 2 cut(s) | 491, 1196 |
| SmoI | CTYRAG | 2 cut(s) | 491, 1196 |
| SpeI | ACTAGT | 1 cut(s) | 829 |
| Sse9I | AATT | 6 cut(s) | 548, 728, 737, 863, 1156, 1213 |
| SspDI | GGCGCC | 2 cut(s) | 578, 842 |
| SspMI | CTAG | 2 cut(s) | 654, 830 |
| SstI | GAGCTC | 1 cut(s) | 1034 |
| StyD4I | CCNGG | 3 cut(s) | 92, 291, 1206 |
| StyI | CCWWGG | 1 cut(s) | 372 |
| TaaI | ACNGT | 3 cut(s) | 28, 783, 928 |
| TaiI | ACGT | 2 cut(s) | 66, 893 |
| TasI | AATT | 6 cut(s) | 548, 728, 737, 863, 1156, 1213 |
| TauI | GCSGC | 3 cut(s) | 453, 456, 579 |
| TfiI | GAWTC | 8 cut(s) | 233, 258, 307, 344, 642, 758, 1057, 1135 |
| Tru1I | TTAA | 2 cut(s) | 740, 1197 |
| Tru9I | TTAA | 2 cut(s) | 740, 1197 |
| TseFI | GTSAC | 3 cut(s) | 97, 1051, 1108 |
| TseI | GCWGC | 5 cut(s) | 276, 427, 607, 916, 990 |
| Tsp45I | GTSAC | 3 cut(s) | 97, 1051, 1108 |
| TspDTI | ATGAA | 2 cut(s) | 83, 503 |
| TspGWI | ACGGA | 3 cut(s) | 729, 1055, 1155 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 298 |
| Vha464I | CTTAAG | 1 cut(s) | 1196 |
| VpaK11BI | GGWCC | 2 cut(s) | 228, 319 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 652 |
| XapI | RAATTY | 1 cut(s) | 1213 |
| XhoI | CTCGAG | 1 cut(s) | 491 |
| XspI | CTAG | 2 cut(s) | 654, 830 |