DNA (cytosine-5)-methyltransferase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17310 AT3G17310 AT3G17310 |
| fragaria_vesca | FvH4_1g24280 FvH4_1g24280 FvH4_1g24280 FvH4_1g24280 FvH4_1g24280 |
| malus_domestica | MD13G1146100.v1.1 MD16G1140200.v1.1 |
| prunus_persica | Prupe.1G109800_v2.0.a1 |
| pyrus_communis | pycom13g12570 pycom13g12580 pycom16g12430 |
| rosa_chinensis | RchiOBHm_Chr2g0120771 |
| rosa_laevigata | RLG00000018580 |
| rosa_multiflora | Rmu_sc0000319.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00122960 |
| rosa_rugosa | Rorug02G0231300 Rorug02G0231300 |
| rosa_samantha | Rh2AG287800 Rh2BG299100 Rh2CG277100 Rh2DG313000 |
| rosa_wichuraiana | Rw2G023070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1391 |
| AccI | GTMKAC | 1 cut(s) | 1059 |
| AciI | CCGC | 1 cut(s) | 2003 |
| AclWI | GGATC | 4 cut(s) | 874, 882, 2000, 2013 |
| AcoI | YGGCCR | 2 cut(s) | 1525, 1849 |
| AcsI | RAATTY | 5 cut(s) | 418, 583, 720, 937, 1345 |
| AcuI | CTGAAG | 2 cut(s) | 1320, 1956 |
| AdeI | CACNNNGTG | 1 cut(s) | 1997 |
| AfaI | GTAC | 3 cut(s) | 1196, 1263, 1697 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1284 |
| AflIII | ACRYGT | 2 cut(s) | 786, 2056 |
| AjnI | CCWGG | 3 cut(s) | 962, 1169, 2008 |
| Alw21I | GWGCWC | 2 cut(s) | 682, 758 |
| Alw26I | GTCTC | 4 cut(s) | 180, 227, 340, 1793 |
| AlwI | GGATC | 4 cut(s) | 874, 882, 2000, 2013 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 272, 863 |
| AoxI | GGCC | 7 cut(s) | 965, 1001, 1122, 1352, 1525, 1665, 1849 |
| ApeKI | GCWGC | 1 cut(s) | 1899 |
| ApoI | RAATTY | 5 cut(s) | 418, 583, 720, 937, 1345 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1441, 1488 |
| AspLEI | GCGC | 2 cut(s) | 46, 909 |
| AspS9I | GGNCC | 2 cut(s) | 1123, 1541 |
| AsuC2I | CCSGG | 1 cut(s) | 329 |
| AsuHPI | GGTGA | 6 cut(s) | 162, 218, 473, 563, 1458, 1616 |
| AvaII | GGWCC | 1 cut(s) | 1541 |
| BalI | TGGCCA | 1 cut(s) | 1851 |
| BamHI | GGATCC | 1 cut(s) | 2005 |
| BanII | GRGCYC | 1 cut(s) | 682 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1245, 1277 |
| BauI | CACGAG | 1 cut(s) | 179 |
| Bbv12I | GWGCWC | 2 cut(s) | 682, 758 |
| BbvI | GCAGC | 1 cut(s) | 1911 |
| BccI | CCATC | 6 cut(s) | 85, 154, 371, 1039, 1209, 2065 |
| BceAI | ACGGC | 1 cut(s) | 822 |
| BciT130I | CCWGG | 3 cut(s) | 964, 1171, 2010 |
| BciVI | GTATCC | 2 cut(s) | 562, 1357 |
| BclI | TGATCA | 1 cut(s) | 1021 |
| BcnI | CCSGG | 1 cut(s) | 329 |
| BcoDI | GTCTC | 4 cut(s) | 180, 227, 340, 1793 |
| BfaI | CTAG | 4 cut(s) | 339, 426, 573, 899 |
| BfmI | CTRYAG | 2 cut(s) | 969, 1794 |
| BfoI | RGCGCY | 1 cut(s) | 910 |
| BfuAI | ACCTGC | 1 cut(s) | 1391 |
| BfuI | GTATCC | 2 cut(s) | 562, 1357 |
| BglII | AGATCT | 2 cut(s) | 57, 691 |
| BisI | GCNGC | 1 cut(s) | 1900 |
| BlsI | GCNGC | 1 cut(s) | 1901 |
| Bme1390I | CCNGG | 4 cut(s) | 329, 964, 1171, 2010 |
| Bme18I | GGWCC | 1 cut(s) | 1541 |
| BmgT120I | GGNCC | 2 cut(s) | 1123, 1541 |
| BmiI | GGNNCC | 4 cut(s) | 363, 1125, 1542, 2007 |
| BmrFI | CCNGG | 4 cut(s) | 329, 964, 1171, 2010 |
| BmsI | GCATC | 7 cut(s) | 106, 205, 244, 410, 457, 818, 1395 |
| Bpu10I | CCTNAGC | 1 cut(s) | 912 |
| BpuEI | CTTGAG | 1 cut(s) | 1622 |
| BpuMI | CCSGG | 1 cut(s) | 329 |
| Bsa29I | ATCGAT | 1 cut(s) | 927 |
| BsaBI | GATNNNNATC | 1 cut(s) | 846 |
| BsaI | GGTCTC | 1 cut(s) | 340 |
| BsaJI | CCNNGG | 3 cut(s) | 22, 547, 1358 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1254, 1284 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1284 |
| Bse1I | ACTGG | 2 cut(s) | 1401, 1852 |
| Bse3DI | GCAATG | 2 cut(s) | 498, 1495 |
| Bse8I | GATNNNNATC | 1 cut(s) | 846 |
| BseBI | CCWGG | 3 cut(s) | 964, 1171, 2010 |
| BseCI | ATCGAT | 1 cut(s) | 927 |
| BseDI | CCNNGG | 3 cut(s) | 22, 547, 1358 |
| BseGI | GGATG | 7 cut(s) | 165, 220, 401, 761, 1050, 1330, 1881 |
| BseJI | GATNNNNATC | 1 cut(s) | 846 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1284 |
| BseMI | GCAATG | 2 cut(s) | 498, 1495 |
| BseMII | CTCAG | 7 cut(s) | 521, 627, 962, 1056, 1248, 1427, 1461 |
| BseNI | ACTGG | 2 cut(s) | 1401, 1852 |
| BseRI | GAGGAG | 1 cut(s) | 374 |
| BseXI | GCAGC | 1 cut(s) | 1911 |
| BseYI | CCCAGC | 1 cut(s) | 1699 |
| BsgI | GTGCAG | 1 cut(s) | 1974 |
| Bsh1285I | CGRYCG | 1 cut(s) | 22 |
| BshFI | GGCC | 7 cut(s) | 967, 1003, 1124, 1354, 1527, 1667, 1851 |
| BshVI | ATCGAT | 1 cut(s) | 927 |
| BsiEI | CGRYCG | 1 cut(s) | 22 |
| BsiHKAI | GWGCWC | 2 cut(s) | 682, 758 |
| BsiSI | CCGG | 1 cut(s) | 329 |
| BslFI | GGGAC | 1 cut(s) | 311 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1284 |
| BsmAI | GTCTC | 4 cut(s) | 180, 227, 340, 1793 |
| BsmBI | CGTCTC | 1 cut(s) | 180 |
| BsmFI | GGGAC | 1 cut(s) | 311 |
| BsmI | GAATGC | 4 cut(s) | 89, 1293, 1464, 1770 |
| BsnI | GGCC | 7 cut(s) | 967, 1003, 1124, 1354, 1527, 1667, 1851 |
| Bso31I | GGTCTC | 1 cut(s) | 340 |
| Bsp1286I | GDGCHC | 2 cut(s) | 682, 758 |
| Bsp1407I | TGTACA | 1 cut(s) | 1261 |
| Bsp143I | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| Bsp19I | CCATGG | 1 cut(s) | 547 |
| BspACI | CCGC | 1 cut(s) | 2003 |
| BspANI | GGCC | 7 cut(s) | 967, 1003, 1124, 1354, 1527, 1667, 1851 |
| BspCNI | CTCAG | 7 cut(s) | 520, 628, 961, 1057, 1247, 1426, 1462 |
| BspDI | ATCGAT | 1 cut(s) | 927 |
| BspLI | GGNNCC | 4 cut(s) | 363, 1125, 1542, 2007 |
| BspMI | ACCTGC | 1 cut(s) | 1391 |
| BspPI | GGATC | 4 cut(s) | 874, 882, 2000, 2013 |
| BspQI | GCTCTTC | 1 cut(s) | 1296 |
| BspTNI | GGTCTC | 1 cut(s) | 340 |
| BsrDI | GCAATG | 2 cut(s) | 498, 1495 |
| BsrGI | TGTACA | 1 cut(s) | 1261 |
| BsrI | ACTGG | 2 cut(s) | 1401, 1852 |
| BssECI | CCNNGG | 3 cut(s) | 22, 547, 1358 |
| BssMI | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| BssSI | CACGAG | 1 cut(s) | 179 |
| BssT1I | CCWWGG | 1 cut(s) | 547 |
| Bst2BI | CACGAG | 1 cut(s) | 179 |
| Bst2UI | CCWGG | 3 cut(s) | 964, 1171, 2010 |
| Bst4CI | ACNGT | 5 cut(s) | 23, 174, 225, 544, 1161 |
| Bst6I | CTCTTC | 4 cut(s) | 48, 204, 1039, 1296 |
| BstAUI | TGTACA | 1 cut(s) | 1261 |
| BstC8I | GCNNGC | 1 cut(s) | 121 |
| BstDSI | CCRYGG | 3 cut(s) | 22, 547, 1358 |
| BstF5I | GGATG | 7 cut(s) | 165, 220, 401, 761, 1050, 1330, 1881 |
| BstH2I | RGCGCY | 1 cut(s) | 910 |
| BstHHI | GCGC | 2 cut(s) | 46, 909 |
| BstKTI | GATC | 8 cut(s) | 60, 694, 775, 869, 877, 924, 1024, 2008 |
| BstMAI | GTCTC | 4 cut(s) | 180, 227, 340, 1793 |
| BstMBI | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| BstMCI | CGRYCG | 1 cut(s) | 22 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 303, 913, 1751, 1867 |
| BstNI | CCWGG | 3 cut(s) | 964, 1171, 2010 |
| BstNSI | RCATGY | 1 cut(s) | 38 |
| BstSCI | CCNGG | 4 cut(s) | 327, 962, 1169, 2008 |
| BstSFI | CTRYAG | 2 cut(s) | 969, 1794 |
| BstV1I | GCAGC | 1 cut(s) | 1911 |
| BstX2I | RGATCY | 3 cut(s) | 57, 691, 2005 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 799 |
| BstYI | RGATCY | 3 cut(s) | 57, 691, 2005 |
| Bsu15I | ATCGAT | 1 cut(s) | 927 |
| BsuI | GTATCC | 2 cut(s) | 562, 1357 |
| BsuRI | GGCC | 7 cut(s) | 967, 1003, 1124, 1354, 1527, 1667, 1851 |
| BsuTUI | ATCGAT | 1 cut(s) | 927 |
| BtgI | CCRYGG | 3 cut(s) | 22, 547, 1358 |
| BtgZI | GCGATG | 1 cut(s) | 591 |
| BtsCI | GGATG | 7 cut(s) | 165, 220, 401, 761, 1050, 1330, 1881 |
| BtsI | GCAGTG | 1 cut(s) | 328 |
| BtsIMutI | CAGTG | 3 cut(s) | 328, 446, 1408 |
| BveI | ACCTGC | 1 cut(s) | 1391 |
| Cac8I | GCNNGC | 1 cut(s) | 121 |
| CaiI | CAGNNNCTG | 2 cut(s) | 272, 863 |
| CfoI | GCGC | 2 cut(s) | 46, 909 |
| Cfr13I | GGNCC | 2 cut(s) | 1123, 1541 |
| ClaI | ATCGAT | 1 cut(s) | 927 |
| Csp6I | GTAC | 3 cut(s) | 1195, 1262, 1696 |
| CviAII | CATG | 6 cut(s) | 35, 86, 548, 598, 1041, 1962 |
| CviQI | GTAC | 3 cut(s) | 1195, 1262, 1696 |
| DpnI | GATC | 8 cut(s) | 59, 693, 774, 868, 876, 923, 1023, 2007 |
| DpnII | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| DraI | TTTAAA | 1 cut(s) | 1686 |
| DraIII | CACNNNGTG | 1 cut(s) | 1997 |
| EaeI | YGGCCR | 2 cut(s) | 1525, 1849 |
| Eam1104I | CTCTTC | 4 cut(s) | 48, 204, 1039, 1296 |
| EarI | CTCTTC | 4 cut(s) | 48, 204, 1039, 1296 |
| Ecl136II | GAGCTC | 1 cut(s) | 680 |
| Eco130I | CCWWGG | 1 cut(s) | 547 |
| Eco147I | AGGCCT | 1 cut(s) | 967 |
| Eco24I | GRGCYC | 1 cut(s) | 682 |
| Eco31I | GGTCTC | 1 cut(s) | 340 |
| Eco32I | GATATC | 1 cut(s) | 513 |
| Eco47I | GGWCC | 1 cut(s) | 1541 |
| Eco53kI | GAGCTC | 1 cut(s) | 680 |
| Eco57I | CTGAAG | 2 cut(s) | 1320, 1956 |
| EcoICRI | GAGCTC | 1 cut(s) | 680 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1123, 1541 |
| EcoRII | CCWGG | 3 cut(s) | 962, 1169, 2008 |
| EcoRV | GATATC | 1 cut(s) | 513 |
| EcoT14I | CCWWGG | 1 cut(s) | 547 |
| EcoT22I | ATGCAT | 1 cut(s) | 91 |
| EcoT38I | GRGCYC | 1 cut(s) | 682 |
| ErhI | CCWWGG | 1 cut(s) | 547 |
| Esp3I | CGTCTC | 1 cut(s) | 180 |
| FaeI | CATG | 6 cut(s) | 38, 89, 551, 601, 1044, 1965 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 389, 421, 1631, 1663 |
| FaqI | GGGAC | 1 cut(s) | 311 |
| FatI | CATG | 6 cut(s) | 34, 85, 547, 597, 1040, 1961 |
| FauNDI | CATATG | 2 cut(s) | 814, 1336 |
| FbaI | TGATCA | 1 cut(s) | 1021 |
| FblI | GTMKAC | 1 cut(s) | 1059 |
| Fnu4HI | GCNGC | 1 cut(s) | 1900 |
| FokI | GGATG | 7 cut(s) | 172, 227, 388, 748, 1057, 1337, 1868 |
| FriOI | GRGCYC | 1 cut(s) | 682 |
| Fsp4HI | GCNGC | 1 cut(s) | 1900 |
| FspBI | CTAG | 4 cut(s) | 339, 426, 573, 899 |
| GlaI | GCGC | 2 cut(s) | 45, 908 |
| GluI | GCNGC | 1 cut(s) | 1900 |
| GsaI | CCCAGC | 1 cut(s) | 1703 |
| HaeII | RGCGCY | 1 cut(s) | 910 |
| HaeIII | GGCC | 7 cut(s) | 967, 1003, 1124, 1354, 1527, 1667, 1851 |
| HapII | CCGG | 1 cut(s) | 329 |
| HhaI | GCGC | 2 cut(s) | 46, 909 |
| Hin1II | CATG | 6 cut(s) | 38, 89, 551, 601, 1044, 1965 |
| Hin6I | GCGC | 2 cut(s) | 44, 907 |
| HinP1I | GCGC | 2 cut(s) | 44, 907 |
| HpaII | CCGG | 1 cut(s) | 329 |
| HphI | GGTGA | 6 cut(s) | 162, 218, 473, 563, 1458, 1616 |
| Hpy166II | GTNNAC | 3 cut(s) | 184, 1060, 1264 |
| Hpy8I | GTNNAC | 3 cut(s) | 184, 1060, 1264 |
| HpyAV | CCTTC | 2 cut(s) | 1247, 1499 |
| HpyCH4III | ACNGT | 5 cut(s) | 23, 174, 225, 544, 1161 |
| HpyCH4IV | ACGT | 2 cut(s) | 786, 2056 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 303, 913, 1751, 1867 |
| HpySE526I | ACGT | 2 cut(s) | 786, 2056 |
| Hsp92II | CATG | 6 cut(s) | 38, 89, 551, 601, 1044, 1965 |
| HspAI | GCGC | 2 cut(s) | 44, 907 |
| Ksp22I | TGATCA | 1 cut(s) | 1021 |
| Kzo9I | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| LguI | GCTCTTC | 1 cut(s) | 1296 |
| LmnI | GCTCC | 6 cut(s) | 132, 361, 677, 685, 761, 1867 |
| Lsp1109I | GCAGC | 1 cut(s) | 1911 |
| LweI | GCATC | 7 cut(s) | 106, 205, 244, 410, 457, 818, 1395 |
| MaeI | CTAG | 4 cut(s) | 339, 426, 573, 899 |
| MaeII | ACGT | 2 cut(s) | 786, 2056 |
| MaeIII | GTNAC | 2 cut(s) | 709, 878 |
| MalI | GATC | 8 cut(s) | 59, 693, 774, 868, 876, 923, 1023, 2007 |
| MboI | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| MfeI | CAATTG | 3 cut(s) | 39, 657, 1376 |
| MflI | RGATCY | 3 cut(s) | 57, 691, 2005 |
| MhlI | GDGCHC | 2 cut(s) | 682, 758 |
| MlsI | TGGCCA | 1 cut(s) | 1851 |
| MluNI | TGGCCA | 1 cut(s) | 1851 |
| MmeI | TCCRAC | 3 cut(s) | 210, 1060, 1845 |
| Mox20I | TGGCCA | 1 cut(s) | 1851 |
| Mph1103I | ATGCAT | 1 cut(s) | 91 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1441, 1488 |
| MscI | TGGCCA | 1 cut(s) | 1851 |
| MseI | TTAA | 5 cut(s) | 750, 825, 1095, 1508, 1685 |
| MslI | CAYNNNNRTG | 1 cut(s) | 552 |
| Msp20I | TGGCCA | 1 cut(s) | 1851 |
| MspI | CCGG | 1 cut(s) | 329 |
| MspR9I | CCNGG | 4 cut(s) | 329, 964, 1171, 2010 |
| MunI | CAATTG | 3 cut(s) | 39, 657, 1376 |
| Mva1269I | GAATGC | 4 cut(s) | 89, 1293, 1464, 1770 |
| MvaI | CCWGG | 3 cut(s) | 964, 1171, 2010 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 303, 913, 1751, 1867 |
| NciI | CCSGG | 1 cut(s) | 329 |
| NcoI | CCATGG | 1 cut(s) | 547 |
| NdeI | CATATG | 2 cut(s) | 814, 1336 |
| NdeII | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| NlaIII | CATG | 6 cut(s) | 38, 89, 551, 601, 1044, 1965 |
| NlaIV | GGNNCC | 4 cut(s) | 363, 1125, 1542, 2007 |
| NmeAIII | GCCGAG | 1 cut(s) | 1746 |
| NmuCI | GTSAC | 1 cut(s) | 878 |
| NsiI | ATGCAT | 1 cut(s) | 91 |
| NspI | RCATGY | 1 cut(s) | 38 |
| PceI | AGGCCT | 1 cut(s) | 967 |
| PciSI | GCTCTTC | 1 cut(s) | 1296 |
| PctI | GAATGC | 4 cut(s) | 89, 1293, 1464, 1770 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1441, 1488 |
| PfoI | TCCNGGA | 1 cut(s) | 327 |
| PkrI | GCNGC | 1 cut(s) | 1901 |
| PpuMI | RGGWCCY | 1 cut(s) | 1541 |
| Psp124BI | GAGCTC | 1 cut(s) | 682 |
| Psp5II | RGGWCCY | 1 cut(s) | 1541 |
| Psp6I | CCWGG | 3 cut(s) | 962, 1169, 2008 |
| PspFI | CCCAGC | 1 cut(s) | 1699 |
| PspGI | CCWGG | 3 cut(s) | 962, 1169, 2008 |
| PspN4I | GGNNCC | 4 cut(s) | 363, 1125, 1542, 2007 |
| PspPI | GGNCC | 2 cut(s) | 1123, 1541 |
| PspPPI | RGGWCCY | 1 cut(s) | 1541 |
| PstNI | CAGNNNCTG | 2 cut(s) | 272, 863 |
| PsuI | RGATCY | 3 cut(s) | 57, 691, 2005 |
| RsaI | GTAC | 3 cut(s) | 1196, 1263, 1697 |
| RsaNI | GTAC | 3 cut(s) | 1195, 1262, 1696 |
| RseI | CAYNNNNRTG | 1 cut(s) | 552 |
| SacI | GAGCTC | 1 cut(s) | 682 |
| SapI | GCTCTTC | 1 cut(s) | 1296 |
| SaqAI | TTAA | 5 cut(s) | 750, 825, 1095, 1508, 1685 |
| SatI | GCNGC | 1 cut(s) | 1900 |
| Sau3AI | GATC | 8 cut(s) | 57, 691, 772, 866, 874, 921, 1021, 2005 |
| Sau96I | GGNCC | 2 cut(s) | 1123, 1541 |
| ScrFI | CCNGG | 4 cut(s) | 329, 964, 1171, 2010 |
| SduI | GDGCHC | 2 cut(s) | 682, 758 |
| SfaNI | GCATC | 7 cut(s) | 106, 205, 244, 410, 457, 818, 1395 |
| SfcI | CTRYAG | 2 cut(s) | 969, 1794 |
| SinI | GGWCC | 1 cut(s) | 1541 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 552 |
| SmlI | CTYRAG | 1 cut(s) | 1637 |
| SmoI | CTYRAG | 1 cut(s) | 1637 |
| SseBI | AGGCCT | 1 cut(s) | 967 |
| SsiI | CCGC | 1 cut(s) | 2003 |
| SspMI | CTAG | 4 cut(s) | 339, 426, 573, 899 |
| SstI | GAGCTC | 1 cut(s) | 682 |
| StuI | AGGCCT | 1 cut(s) | 967 |
| StyD4I | CCNGG | 4 cut(s) | 327, 962, 1169, 2008 |
| StyI | CCWWGG | 1 cut(s) | 547 |
| TaaI | ACNGT | 5 cut(s) | 23, 174, 225, 544, 1161 |
| TaiI | ACGT | 2 cut(s) | 789, 2059 |
| TaqI | TCGA | 1 cut(s) | 927 |
| TatI | WGTACW | 1 cut(s) | 1261 |
| Tru1I | TTAA | 5 cut(s) | 750, 825, 1095, 1508, 1685 |
| Tru9I | TTAA | 5 cut(s) | 750, 825, 1095, 1508, 1685 |
| TscAI | CASTG | 3 cut(s) | 328, 453, 1408 |
| TseFI | GTSAC | 1 cut(s) | 878 |
| TseI | GCWGC | 1 cut(s) | 1899 |
| Tsp45I | GTSAC | 1 cut(s) | 878 |
| TspGWI | ACGGA | 1 cut(s) | 1347 |
| TspRI | CASTG | 3 cut(s) | 328, 453, 1408 |
| VpaK11BI | GGWCC | 1 cut(s) | 1541 |
| XapI | RAATTY | 5 cut(s) | 418, 583, 720, 937, 1345 |
| XbaI | TCTAGA | 1 cut(s) | 425 |
| XceI | RCATGY | 1 cut(s) | 38 |
| XmiI | GTMKAC | 1 cut(s) | 1059 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1441, 1488 |
| XspI | CTAG | 4 cut(s) | 339, 426, 573, 899 |
| Zsp2I | ATGCAT | 1 cut(s) | 91 |