Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000319.1

Orthogroup ID

OG0007149

Physical Location & Seq

Genomic Coordinates Reverse (-)

29933 .. 37186

Gene Structure 7254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000319.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

atgccagtcgaaccaactgaaaagccagagcgcatttcttcgacgaagtcaccatgggcagtagttctcccatctagcagcaaccccatgacggtcttcttcttcttcttcttcctcgctcgcacatcagctgacggcctcctactccatagcctagcctggctcaaaaaccgaggcggggcagctgcccctggtttcatttctcgaagggtcatcaacatcaatatgaccactgactcgaacaggaagagcagttccgatcatgaacaccaacatgcagttgtgcccaaagaagagatcttggagtttgagttgccttcacctcatgcattcccaacccatttcgggaacaatgatgcaagttcctcagggagcaatatgagagcaaatatgattggaatgggattttctccgtcccgtgttgacaaagtgattgaagaaaagggtgaagaggacgccgaactgttgttggagacacttttatcatatcaaggtacgcagaaatcagattctgggtcatcagattctctggatagcttatttggcgacaaagatgcaagcagtgctctcgaggtttctagtatgtttcaaccaaaagaggaacctgatttatctgatggacttgatgatggaaaaaaggcctccttacttatgatgaatttttctagagatgaagttgagtttgcaatgaataggcttggtgaagatgctccaatcaatgacttggtggattttatcattgcttctcagatatctgtgaaacttgagaatgatgtagattcaaccccggttgatgaagaaaaggaggatacaagtgatgaaaaattatatggaatcatggagaagtcagttcgtttgcttgaaatggggttctctgagaaccaagtttcttttgcaattgaaaagtttggctctggagctccacttacagatcttgcagaatcaatagttacaggtcaaatttatgatgattgctatgacaaaaaaattaaggtagcaacccattcaaatcattcacgcaatgtgtccagttttttcggaacggcatcatatggttcagtaaaagttgaaaatgaggaattttatccagatacagcttctcgatcaagggatcgtgacttggcagataattatttagggaagcggcctaagcaagagatcattgatgattcaaattctgttcctcagtttagggtgtccaggcctatagatttcagggaaaatcgtaaagggaaaaggccaaaacgagagtatattgatgattcaggctcttctgcatggatggaagaaaaagtagaccctgagatttgcaaagttgggaatccaaaacttcagagtgtgaaccaaatggccgctaaacccccatatttcttctatggaaatgttctgaatctaccatatgattcctggtccaaagtttctcaattcttgtacggccatcaacctgaatatgccaataatcagttcttctcagccttgagtagaagggaagggtatgtacacaatctcccaactgagaacaggtttcgtatccttgaagagccaccaatgaccattcaggatgcaataccatatgcaaagaatttgtggcctccgtgggatacaaggaagcaattgacctgcatcagttctgaaaccagtggcatatctcagctgtgtgacaggcttggaagaatggtttctgattgtcgtggaatgctctcacctgagaaacagagggagatccttcatcattgcaactcattaaatcttgtatgggttggccgaaacaagttgggtcctttacagcctgaatacttggaacaaatcttaggctatccactgaatcacactaaagttggtgagagtggtgtaattgaaagacttacttccctcaagtattgcttccagacagacacattggcttatcatctttctgttttaaaggctttgtacccagaaggattaacaatgttctcaatttttagtggaataggtggagcagagatagctttacacaagcttggcattcctttgaaaggtgttgtatctgtagagacttgtgcaacaaagagaaggattcttcggaggtggtgggaaactactggccaaattgggcagttggagcaaattgatgacatccagaaactaacaagcagcaagcttgaaagtctgatgaaaaggtttggtggttttgatttccttatttgtcagaatccatgtagttcttcagtttctaaaattcctgcgcaaagtgacagtgatccaggctttgacttctcattgttttatgagtttgttcgtgtctatcaacgtgtaagaaatatgatggatagaaagagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_methylase

Protein Analysis

774

Amino Acids

87.11

Weight (kDa)

5.35

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17310 AT3G17310 AT3G17310
fragaria_vesca	FvH4_1g24280 FvH4_1g24280 FvH4_1g24280 FvH4_1g24280 FvH4_1g24280
malus_domestica	MD13G1146100.v1.1 MD16G1140200.v1.1
prunus_persica	Prupe.1G109800_v2.0.a1
pyrus_communis	pycom13g12570 pycom13g12580 pycom16g12430
rosa_chinensis	RchiOBHm_Chr2g0120771
rosa_laevigata	RLG00000018580
rosa_multiflora	Rmu_sc0000319.1_g000003
rosa_roxburghii	Rroxscaffold_2G00122960
rosa_rugosa	Rorug02G0231300 Rorug02G0231300
rosa_samantha	Rh2AG287800 Rh2BG299100 Rh2CG277100 Rh2DG313000
rosa_wichuraiana	Rw2G023070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2229
Acc36I	ACCTGC	1 cut(s)	1628
AccI	GTMKAC	1 cut(s)	1296
AciI	CCGC	3 cut(s)	177, 1144, 1353
AclWI	GGATC	3 cut(s)	1119, 1717, 2237
AcoI	YGGCCR	4 cut(s)	1350, 1435, 1762, 2086
AcsI	RAATTY	6 cut(s)	658, 960, 1079, 1174, 1582, 2220
AcuI	CTGAAG	2 cut(s)	1316, 2193
AcyI	GRCGYC	1 cut(s)	456
AfaI	GTAC	4 cut(s)	496, 1433, 1500, 1934
AfiI	CCNNNNNNNGG	4 cut(s)	91, 178, 345, 2018
AflIII	ACRYGT	1 cut(s)	2293
AjnI	CCWGG	5 cut(s)	158, 190, 1199, 1406, 2245
AjuI	GAANNNNNNNTTGG	2 cut(s)	1448, 1480
AloI	GAACNNNNNNTCC	2 cut(s)	238, 270
Alw21I	GWGCWC	2 cut(s)	568, 922
Alw26I	GTCTC	2 cut(s)	467, 2030
AlwI	GGATC	3 cut(s)	1119, 1717, 2237
AlwNI	CAGNNNCTG	1 cut(s)	512
Ama87I	CYCGRG	1 cut(s)	569
ApeKI	GCWGC	4 cut(s)	78, 182, 185, 2136
ApoI	RAATTY	6 cut(s)	658, 960, 1079, 1174, 1582, 2220
Asp700I	GAANNNNTTC	1 cut(s)	1678
AspLEI	GCGC	2 cut(s)	33, 2230
AspS9I	GGNCC	2 cut(s)	1410, 1778
AsuC2I	CCSGG	1 cut(s)	788
AsuHPI	GGTGA	6 cut(s)	42, 312, 458, 713, 1695, 1853
AvaI	CYCGRG	1 cut(s)	569
AvaII	GGWCC	2 cut(s)	1410, 1778
AxyI	CCTNAGG	1 cut(s)	367
BaeGI	GKGCMC	1 cut(s)	288
BalI	TGGCCA	1 cut(s)	2088
BanII	GRGCYC	1 cut(s)	922
BarI	GAAGNNNNNNTAC	2 cut(s)	1482, 1514
BbsI	GAAGAC	1 cut(s)	88
Bbv12I	GWGCWC	2 cut(s)	568, 922
BbvI	GCAGC	4 cut(s)	90, 172, 194, 2148
BccI	CCATC	6 cut(s)	79, 611, 623, 1276, 1446, 2302
BceAI	ACGGC	3 cut(s)	151, 1059, 1450
BcgI	CGANNNNNNTGC	4 cut(s)	536, 550, 570, 584
BciT130I	CCWGG	5 cut(s)	160, 192, 1201, 1408, 2247
BciVI	GTATCC	3 cut(s)	802, 1541, 1594
BcnI	CCSGG	1 cut(s)	788
BcoDI	GTCTC	2 cut(s)	467, 2030
BfaI	CTAG	4 cut(s)	75, 155, 579, 666
BfmI	CTRYAG	2 cut(s)	1206, 2031
BfuAI	ACCTGC	1 cut(s)	1628
BfuI	GTATCC	3 cut(s)	802, 1541, 1594
BglII	AGATCT	2 cut(s)	297, 931
BisI	GCNGC	6 cut(s)	79, 183, 186, 1145, 1353, 2137
BlsI	GCNGC	6 cut(s)	80, 184, 187, 1146, 1354, 2138
Bme1390I	CCNGG	6 cut(s)	160, 192, 788, 1201, 1408, 2247
Bme18I	GGWCC	2 cut(s)	1410, 1778
BmeT110I	CYCGRG	1 cut(s)	569
BmgT120I	GGNCC	2 cut(s)	1410, 1778
BmiI	GGNNCC	2 cut(s)	603, 1779
BmrFI	CCNGG	6 cut(s)	160, 192, 788, 1201, 1408, 2247
BmsI	GCATC	6 cut(s)	346, 544, 697, 1055, 1552, 1632
BpiI	GAAGAC	1 cut(s)	88
BpmI	CTGGAG	1 cut(s)	936
Bpu10I	CCTNAGC	1 cut(s)	1149
BpuEI	CTTGAG	3 cut(s)	785, 1498, 1859
BpuMI	CCSGG	1 cut(s)	788
BsaHI	GRCGYC	1 cut(s)	456
BsaJI	CCNNGG	5 cut(s)	53, 172, 190, 786, 1595
BsaXI	ACNNNNNCTCC	4 cut(s)	296, 326, 1491, 1521
Bsc4I	CCNNNNNNNGG	4 cut(s)	91, 178, 345, 2018
Bse1I	ACTGG	4 cut(s)	5, 1029, 1638, 2089
Bse21I	CCTNAGG	1 cut(s)	367
Bse3DI	GCAATG	4 cut(s)	693, 738, 1027, 1732
BseBI	CCWGG	5 cut(s)	160, 192, 1201, 1408, 2247
BseDI	CCNNGG	5 cut(s)	53, 172, 190, 786, 1595
BseGI	GGATG	3 cut(s)	1287, 1567, 2118
BseLI	CCNNNNNNNGG	4 cut(s)	91, 178, 345, 2018
BseMI	GCAATG	4 cut(s)	693, 738, 1027, 1732
BseMII	CTCAG	9 cut(s)	381, 761, 867, 1199, 1293, 1485, 1506, 1664, 1698
BseNI	ACTGG	4 cut(s)	5, 1029, 1638, 2089
BseSI	GKGCMC	1 cut(s)	288
BseXI	GCAGC	4 cut(s)	90, 172, 194, 2148
BsiHKAI	GWGCWC	2 cut(s)	568, 922
BsiHKCI	CYCGRG	1 cut(s)	569
BsiSI	CCGG	1 cut(s)	788
BslFI	GGGAC	1 cut(s)	400
BslI	CCNNNNNNNGG	4 cut(s)	91, 178, 345, 2018
BsmAI	GTCTC	2 cut(s)	467, 2030
BsmFI	GGGAC	1 cut(s)	400
BsmI	GAATGC	3 cut(s)	329, 1701, 2007
BsoBI	CYCGRG	1 cut(s)	569
Bsp1286I	GDGCHC	3 cut(s)	288, 568, 922
Bsp1407I	TGTACA	1 cut(s)	1498
Bsp143I	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
Bsp19I	CCATGG	1 cut(s)	53
BspACI	CCGC	3 cut(s)	177, 1144, 1353
BspCNI	CTCAG	9 cut(s)	380, 760, 868, 1198, 1294, 1484, 1507, 1663, 1699
BspHI	TCATGA	1 cut(s)	262
BspLI	GGNNCC	2 cut(s)	603, 1779
BspMI	ACCTGC	1 cut(s)	1628
BspPI	GGATC	3 cut(s)	1119, 1717, 2237
BspQI	GCTCTTC	3 cut(s)	242, 1276, 1533
BsrDI	GCAATG	4 cut(s)	693, 738, 1027, 1732
BsrGI	TGTACA	1 cut(s)	1498
BsrI	ACTGG	4 cut(s)	5, 1029, 1638, 2089
BssECI	CCNNGG	5 cut(s)	53, 172, 190, 786, 1595
BssMI	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
BssNI	GRCGYC	1 cut(s)	456
BssT1I	CCWWGG	1 cut(s)	53
Bst2UI	CCWGG	5 cut(s)	160, 192, 1201, 1408, 2247
Bst4CI	ACNGT	3 cut(s)	94, 465, 2240
Bst6I	CTCTTC	5 cut(s)	242, 288, 444, 1276, 1533
BstACI	GRCGYC	1 cut(s)	456
BstAPI	GCANNNNNTGC	1 cut(s)	563
BstAUI	TGTACA	1 cut(s)	1498
BstC8I	GCNNGC	3 cut(s)	121, 559, 2141
BstDSI	CCRYGG	2 cut(s)	53, 1595
BstENI	CCTNNNNNAGG	1 cut(s)	2016
BstF5I	GGATG	3 cut(s)	1287, 1567, 2118
BstHHI	GCGC	2 cut(s)	33, 2230
BstKTI	GATC	8 cut(s)	262, 300, 934, 1106, 1114, 1161, 1725, 2245
BstMAI	GTCTC	2 cut(s)	467, 2030
BstMBI	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
BstMWI	GCNNNNNNNGC	5 cut(s)	543, 563, 1150, 1988, 2104
BstNI	CCWGG	5 cut(s)	160, 192, 1201, 1408, 2247
BstNSI	RCATGY	1 cut(s)	278
BstSCI	CCNGG	6 cut(s)	158, 190, 786, 1199, 1406, 2245
BstSFI	CTRYAG	2 cut(s)	1206, 2031
BstSLI	GKGCMC	1 cut(s)	288
BstV1I	GCAGC	4 cut(s)	90, 172, 194, 2148
BstV2I	GAAGAC	1 cut(s)	88
BstX2I	RGATCY	3 cut(s)	297, 931, 1722
BstYI	RGATCY	3 cut(s)	297, 931, 1722
Bsu36I	CCTNAGG	1 cut(s)	367
BsuI	GTATCC	3 cut(s)	802, 1541, 1594
BtgI	CCRYGG	2 cut(s)	53, 1595
BtsCI	GGATG	3 cut(s)	1287, 1567, 2118
BtsI	GCAGTG	1 cut(s)	568
BtsIMutI	CAGTG	5 cut(s)	231, 568, 1645, 1820, 2245
BveI	ACCTGC	1 cut(s)	1628
Cac8I	GCNNGC	3 cut(s)	121, 559, 2141
CaiI	CAGNNNCTG	1 cut(s)	512
CciI	TCATGA	1 cut(s)	262
CfoI	GCGC	2 cut(s)	33, 2230
Cfr13I	GGNCC	2 cut(s)	1410, 1778
CseI	GACGC	1 cut(s)	464
Csp6I	GTAC	4 cut(s)	495, 1432, 1499, 1933
CviAII	CATG	8 cut(s)	54, 88, 263, 275, 326, 838, 1278, 2199
CviQI	GTAC	4 cut(s)	495, 1432, 1499, 1933
DpnI	GATC	8 cut(s)	261, 299, 933, 1105, 1113, 1160, 1724, 2244
DpnII	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
DraI	TTTAAA	1 cut(s)	1923
EaeI	YGGCCR	4 cut(s)	1350, 1435, 1762, 2086
Eam1104I	CTCTTC	5 cut(s)	242, 288, 444, 1276, 1533
EarI	CTCTTC	5 cut(s)	242, 288, 444, 1276, 1533
Ecl136II	GAGCTC	1 cut(s)	920
Eco130I	CCWWGG	1 cut(s)	53
Eco147I	AGGCCT	2 cut(s)	641, 1204
Eco24I	GRGCYC	1 cut(s)	922
Eco32I	GATATC	1 cut(s)	753
Eco47I	GGWCC	2 cut(s)	1410, 1778
Eco53kI	GAGCTC	1 cut(s)	920
Eco57I	CTGAAG	2 cut(s)	1316, 2193
Eco81I	CCTNAGG	1 cut(s)	367
Eco88I	CYCGRG	1 cut(s)	569
EcoICRI	GAGCTC	1 cut(s)	920
EcoNI	CCTNNNNNAGG	1 cut(s)	2016
EcoO109I	RGGNCCY	1 cut(s)	1778
EcoRII	CCWGG	5 cut(s)	158, 190, 1199, 1406, 2245
EcoRV	GATATC	1 cut(s)	753
EcoT14I	CCWWGG	1 cut(s)	53
EcoT22I	ATGCAT	1 cut(s)	331
EcoT38I	GRGCYC	1 cut(s)	922
ErhI	CCWWGG	1 cut(s)	53
FaeI	CATG	8 cut(s)	57, 91, 266, 278, 329, 841, 1281, 2202
FalI	AAGNNNNNCTT	6 cut(s)	629, 661, 1852, 1884, 1868, 1900
FaqI	GGGAC	1 cut(s)	400
FatI	CATG	8 cut(s)	53, 87, 262, 274, 325, 837, 1277, 2198
FauI	CCCGC	1 cut(s)	170
FauNDI	CATATG	3 cut(s)	1051, 1399, 1573
FblI	GTMKAC	1 cut(s)	1296
Fnu4HI	GCNGC	6 cut(s)	79, 183, 186, 1145, 1353, 2137
FokI	GGATG	3 cut(s)	1294, 1574, 2105
FriOI	GRGCYC	1 cut(s)	922
Fsp4HI	GCNGC	6 cut(s)	79, 183, 186, 1145, 1353, 2137
FspBI	CTAG	4 cut(s)	75, 155, 579, 666
FspI	TGCGCA	1 cut(s)	2229
GlaI	GCGC	2 cut(s)	32, 2229
GluI	GCNGC	6 cut(s)	79, 183, 186, 1145, 1353, 2137
GsuI	CTGGAG	1 cut(s)	936
HapII	CCGG	1 cut(s)	788
HgaI	GACGC	1 cut(s)	464
HhaI	GCGC	2 cut(s)	33, 2230
Hin1I	GRCGYC	1 cut(s)	456
Hin1II	CATG	8 cut(s)	57, 91, 266, 278, 329, 841, 1281, 2202
Hin6I	GCGC	2 cut(s)	31, 2228
HinP1I	GCGC	2 cut(s)	31, 2228
HincII	GTYRAC	1 cut(s)	424
HindII	GTYRAC	1 cut(s)	424
HindIII	AAGCTT	2 cut(s)	2000, 2141
HpaII	CCGG	1 cut(s)	788
HphI	GGTGA	6 cut(s)	42, 312, 458, 713, 1695, 1853
Hpy166II	GTNNAC	4 cut(s)	424, 1297, 1342, 1501
Hpy8I	GTNNAC	4 cut(s)	424, 1297, 1342, 1501
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	7 cut(s)	201, 327, 1479, 1484, 1736, 1934, 2049
HpyCH4III	ACNGT	3 cut(s)	94, 465, 2240
HpyCH4IV	ACGT	1 cut(s)	2293
HpyF10VI	GCNNNNNNNGC	5 cut(s)	543, 563, 1150, 1988, 2104
HpySE526I	ACGT	1 cut(s)	2293
Hsp92I	GRCGYC	1 cut(s)	456
Hsp92II	CATG	8 cut(s)	57, 91, 266, 278, 329, 841, 1281, 2202
HspAI	GCGC	2 cut(s)	31, 2228
Kzo9I	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
LguI	GCTCTTC	3 cut(s)	242, 1276, 1533
LmnI	GCTCC	6 cut(s)	372, 715, 917, 925, 1979, 2104
Lsp1109I	GCAGC	4 cut(s)	90, 172, 194, 2148
LweI	GCATC	6 cut(s)	346, 544, 697, 1055, 1552, 1632
MaeI	CTAG	4 cut(s)	75, 155, 579, 666
MaeII	ACGT	1 cut(s)	2293
MaeIII	GTNAC	5 cut(s)	48, 949, 1115, 1658, 2234
MalI	GATC	8 cut(s)	261, 299, 933, 1105, 1113, 1160, 1724, 2244
MboI	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
MfeI	CAATTG	2 cut(s)	897, 1613
MflI	RGATCY	3 cut(s)	297, 931, 1722
MhlI	GDGCHC	3 cut(s)	288, 568, 922
MlsI	TGGCCA	1 cut(s)	2088
MluNI	TGGCCA	1 cut(s)	2088
MlyI	GAGTC	1 cut(s)	230
MmeI	TCCRAC	2 cut(s)	450, 2082
Mox20I	TGGCCA	1 cut(s)	2088
Mph1103I	ATGCAT	1 cut(s)	331
MroXI	GAANNNNTTC	1 cut(s)	1678
MscI	TGGCCA	1 cut(s)	2088
MseI	TTAA	4 cut(s)	990, 1745, 1922, 1946
MslI	CAYNNNNRTG	2 cut(s)	224, 273
Msp20I	TGGCCA	1 cut(s)	2088
MspA1I	CMGCKG	3 cut(s)	131, 185, 1654
MspI	CCGG	1 cut(s)	788
MspR9I	CCNGG	6 cut(s)	160, 192, 788, 1201, 1408, 2247
MunI	CAATTG	2 cut(s)	897, 1613
Mva1269I	GAATGC	3 cut(s)	329, 1701, 2007
MvaI	CCWGG	5 cut(s)	160, 192, 1201, 1408, 2247
MwoI	GCNNNNNNNGC	5 cut(s)	543, 563, 1150, 1988, 2104
NciI	CCSGG	1 cut(s)	788
NcoI	CCATGG	1 cut(s)	53
NdeI	CATATG	3 cut(s)	1051, 1399, 1573
NdeII	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
NlaIII	CATG	8 cut(s)	57, 91, 266, 278, 329, 841, 1281, 2202
NlaIV	GGNNCC	2 cut(s)	603, 1779
NmuCI	GTSAC	4 cut(s)	48, 1115, 1658, 2234
NsbI	TGCGCA	1 cut(s)	2229
NsiI	ATGCAT	1 cut(s)	331
NspI	RCATGY	1 cut(s)	278
PaeR7I	CTCGAG	1 cut(s)	569
PagI	TCATGA	1 cut(s)	262
PceI	AGGCCT	2 cut(s)	641, 1204
PciSI	GCTCTTC	3 cut(s)	242, 1276, 1533
PctI	GAATGC	3 cut(s)	329, 1701, 2007
PdmI	GAANNNNTTC	1 cut(s)	1678
PflFI	GACNNNGTC	1 cut(s)	46
PkrI	GCNGC	6 cut(s)	80, 184, 187, 1146, 1354, 2138
PleI	GAGTC	1 cut(s)	230
PpsI	GAGTC	1 cut(s)	230
PpuMI	RGGWCCY	1 cut(s)	1778
Psp124BI	GAGCTC	1 cut(s)	922
Psp5II	RGGWCCY	1 cut(s)	1778
Psp6I	CCWGG	5 cut(s)	158, 190, 1199, 1406, 2245
PspGI	CCWGG	5 cut(s)	158, 190, 1199, 1406, 2245
PspN4I	GGNNCC	2 cut(s)	603, 1779
PspPI	GGNCC	2 cut(s)	1410, 1778
PspPPI	RGGWCCY	1 cut(s)	1778
PstNI	CAGNNNCTG	1 cut(s)	512
PsuI	RGATCY	3 cut(s)	297, 931, 1722
PsyI	GACNNNGTC	1 cut(s)	46
PvuII	CAGCTG	3 cut(s)	131, 185, 1654
RsaI	GTAC	4 cut(s)	496, 1433, 1500, 1934
RsaNI	GTAC	4 cut(s)	495, 1432, 1499, 1933
RseI	CAYNNNNRTG	2 cut(s)	224, 273
SacI	GAGCTC	1 cut(s)	922
SapI	GCTCTTC	3 cut(s)	242, 1276, 1533
SaqAI	TTAA	4 cut(s)	990, 1745, 1922, 1946
SatI	GCNGC	6 cut(s)	79, 183, 186, 1145, 1353, 2137
Sau3AI	GATC	8 cut(s)	259, 297, 931, 1103, 1111, 1158, 1722, 2242
Sau96I	GGNCC	2 cut(s)	1410, 1778
SchI	GAGTC	1 cut(s)	230
ScrFI	CCNGG	6 cut(s)	160, 192, 788, 1201, 1408, 2247
SduI	GDGCHC	3 cut(s)	288, 568, 922
SfaNI	GCATC	6 cut(s)	346, 544, 697, 1055, 1552, 1632
SfcI	CTRYAG	2 cut(s)	1206, 2031
Sfr274I	CTCGAG	1 cut(s)	569
SinI	GGWCC	2 cut(s)	1410, 1778
SlaI	CTCGAG	1 cut(s)	569
SmiMI	CAYNNNNRTG	2 cut(s)	224, 273
SmlI	CTYRAG	4 cut(s)	569, 764, 1477, 1874
SmoI	CTYRAG	4 cut(s)	569, 764, 1477, 1874
SseBI	AGGCCT	2 cut(s)	641, 1204
SsiI	CCGC	3 cut(s)	177, 1144, 1353
SspMI	CTAG	4 cut(s)	75, 155, 579, 666
SstI	GAGCTC	1 cut(s)	922
StuI	AGGCCT	2 cut(s)	641, 1204
StyD4I	CCNGG	6 cut(s)	158, 190, 786, 1199, 1406, 2245
StyI	CCWWGG	1 cut(s)	53
TaaI	ACNGT	3 cut(s)	94, 465, 2240
TaiI	ACGT	1 cut(s)	2296
TaqI	TCGA	6 cut(s)	9, 41, 205, 239, 570, 1102
TatI	WGTACW	1 cut(s)	1498
TauI	GCSGC	2 cut(s)	1147, 1355
Tru1I	TTAA	4 cut(s)	990, 1745, 1922, 1946
Tru9I	TTAA	4 cut(s)	990, 1745, 1922, 1946
TscAI	CASTG	5 cut(s)	238, 568, 1645, 1827, 2245
TseFI	GTSAC	4 cut(s)	48, 1115, 1658, 2234
TseI	GCWGC	4 cut(s)	78, 182, 185, 2136
Tsp45I	GTSAC	4 cut(s)	48, 1115, 1658, 2234
TspDTI	ATGAA	9 cut(s)	187, 279, 671, 687, 704, 810, 834, 1718, 2171
TspGWI	ACGGA	2 cut(s)	402, 1584
TspRI	CASTG	5 cut(s)	238, 568, 1645, 1827, 2245
Tth111I	GACNNNGTC	1 cut(s)	46
VpaK11BI	GGWCC	2 cut(s)	1410, 1778
XagI	CCTNNNNNAGG	1 cut(s)	2016
XapI	RAATTY	6 cut(s)	658, 960, 1079, 1174, 1582, 2220
XbaI	TCTAGA	1 cut(s)	665
XceI	RCATGY	1 cut(s)	278
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1404
XhoI	CTCGAG	1 cut(s)	569
XmiI	GTMKAC	1 cut(s)	1296
XmnI	GAANNNNTTC	1 cut(s)	1678
XspI	CTAG	4 cut(s)	75, 155, 579, 666
Zsp2I	ATGCAT	1 cut(s)	331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.