Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007149

Physical Location & Seq

Genomic Coordinates Forward (+)

33594596 .. 33600610

Gene Structure 6015 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49335

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGCAGTTTAAACTCGGCACATTGGGCATGCATGTCCTGAAATTTTTTATTCTTTTAATGAGGTTGCATTTATTGCTAAACCCACGACGTCGTTTTGTTGAGACAGTTAAAAACTTAAAAGCGCAGGTCTTCTTCTTCTTCGTCCTCGCTCGCACATCAGCTGACGACTTCCGACTCCATAGCCTAGCCTGGCTCAAAAACCGAGGCGGGGCAGCTGCCCCTGGTTTCATTTCTCGAAGGGTCATCAACATCAATATGACCACTGACTCGAACAGGAAGAGTAGCTCCGATCATGAATACCAACATGCAATTGTGCCCAAAGAAGAGATCTTGGAGTTTGAGTTGCCTTCACCTCATGCATTCCCAACCCATTTCGGGAACAATGATGCAAGTTCCTCAGGGAGCAATATGAGAGCAAATATGATTGGAATGGGATTTTCGCCGTCCCGCGTCGACAAAGTGATTGAAGAAAAGGGTGAAGAGGACGCCGAACAGTTGTTGGAGACACTTTTATCATATCAAGATACGCAGAAATCAGATTCTGGGTCATCAGATTCGCTGGATAGCTTATTTGGTGACAAAGATGCAAGCAGTGCTCTCGAGGTTTCTAGTATGATTCAACCAAAAGAGGAACCTGATTTATCTGATGGACTTGATGATGGAAAAAAGGCGTCCTTACTTATGATGAATTTTTCTAGAGATGAAGTTGAGTTTGCAATGAATAGGCTTGGTGAAGATGCTCCAATCAATGACTTGGTGGATTTTATCATTGCTTCTCAGATATCTGTGAAACTTGAGAATGATGTAGATTCAACCCCGGTTGATGAAGAAAAGGAGGATACAAGTGATGAAAAATTATATGGAATCATGGAGAAGTCAGTTCGTTTGCTTGAAATGGGGTTCTCTGAGAACCAAGTTTCTTTTGCAATTGAACAGTTTGGCTCTGGAGCTCCACTTACAGATCTTGCAGAATCAATCGTTACAGGTCAAATTTATGATAATTGCTATGACAAAAAAATTAAGGTAGCATCCCATTCAAATCATTCACGCAATGTGTCCAGTTTTTTCGGAACGGCATCATATGGTTCAGTAAAAGTTGAAAATGAGGAATTTTATCCAGATACAGCTTCTCGATCAAGGGATCGTGACTTGGCAGATAATTATTTAGGGAAGCGGCCTAAGCAAGAGATCATTGATGATTCAAATTCTGTTCCTCAGTTTAGGGTGTCCAGGCCTATAGATTTCGGGGAAAATCGTAAAGGGAAAAGGCCAAAACGAGAGTATATTGATGATTCAAGCTCTTCTGCATGGATGGAAGAAAAAGTAGACCCTGAGATTTGCAAAGTTGGGAATCCAAAACTTCAGAGTGTGAACCAAATGGCCGCTAAACCCCCATATTTCTTCTATGGAAATGTTCTGAATCTACCATATGATTCCTGGTCCAAAGTTTCTCAATTCCTGTACGGCCATCAACCTGAATATGTCAATAATCAGTTCTTCTCAGCCTTGAGTAGAAGGGAAGGGTATGTACACAATCTCCCAACTGAGAACAGGTTTCGTATTCTTGAAGAGCCACCAATGACCATTCAGGATGCAATACCATATGCAAAGAATTTGTGGCCTCCGTGGGATACAAGGAAGCAATTGACCTGCATCAGTTCTGAAACCAGTGGCATATCTCAGCTGTGTGACAGGCTTGGAAGAATGGTTTCTGATTGTCGTGGAATGCTCTCACCTGAGAAACAGAGGGAAATCCTTCATCATTGCAACTCATTAAATCTTGTATGGGTTGGCCGAAACAAGTTGGGTCCTTTACAGCCTGAATACTTGGAACAAATCTTAGGCTATCCGCTGAATCACACTAAAGTTGGTGAGAGTGGTGTAATTGAAAGACTTACTTCCCTCAAGTATTGCTTCCAGACAGACACATTGGCTTATCATCTTTCTGTTTTAAAGGCTTTGTACCCAGAAGGATTAACAATGTTCTCAATTTTTAGTGGAATAGGCGGAGCAGAGATAGCTTTACACAAGCTTGGCATTCCTTTGAAAGGTGTTGTATCTGTAGAGACTTGTGTAACAAAGAGAAGGATTCTTCGGAGGTGGTGGGAAACTACTGGCCAAATTGGGCAGTTGGAGCAAATTGATGACATTCAGAAACTAACAAGCAGCAAGCTTGAAAGTCTGATGAAAAGGTTTGGTGGTTTTGATTTCCTTATTTGTCAGAATCCATGTAGTTCTTCAGTTTCTAAAATTCCTGCGCAAAGTGGCAGTGATCCAGGCTTTGACTTCTCATTGTTTTATGAGTTTGTTCGTGTCTATCAACGTGTAAGAAATATGATGGATAGAAAGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_methylase

Protein Analysis

784

Amino Acids

88.71

Weight (kDa)

5.67

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17310 AT3G17310 AT3G17310
fragaria_vesca	FvH4_1g24280 FvH4_1g24280 FvH4_1g24280 FvH4_1g24280 FvH4_1g24280
malus_domestica	MD13G1146100.v1.1 MD16G1140200.v1.1
prunus_persica	Prupe.1G109800_v2.0.a1
pyrus_communis	pycom13g12570 pycom13g12580 pycom16g12430
rosa_chinensis	RchiOBHm_Chr2g0120771
rosa_laevigata	RLG00000018580
rosa_multiflora	Rmu_sc0000319.1_g000003
rosa_roxburghii	Rroxscaffold_2G00122960
rosa_rugosa	Rorug02G0231300 Rorug02G0231300
rosa_samantha	Rh2AG287800 Rh2BG299100 Rh2CG277100 Rh2DG313000
rosa_wichuraiana	Rw2G023070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	91
Acc16I	TGCGCA	1 cut(s)	2259
Acc36I	ACCTGC	2 cut(s)	115, 1658
AccI	GTMKAC	2 cut(s)	453, 1326
AccII	CGCG	1 cut(s)	450
AciI	CCGC	6 cut(s)	207, 448, 1174, 1383, 1850, 2007
AclWI	GGATC	2 cut(s)	1149, 2267
AcoI	YGGCCR	4 cut(s)	1380, 1465, 1792, 2116
AcsI	RAATTY	7 cut(s)	41, 688, 990, 1109, 1204, 1612, 2250
AcuI	CTGAAG	2 cut(s)	1346, 2223
AcyI	GRCGYC	3 cut(s)	88, 486, 671
AfaI	GTAC	3 cut(s)	1463, 1530, 1964
AfiI	CCNNNNNNNGG	3 cut(s)	208, 375, 2048
AflIII	ACRYGT	1 cut(s)	2323
AjnI	CCWGG	5 cut(s)	188, 220, 1229, 1436, 2275
Alw21I	GWGCWC	2 cut(s)	598, 952
Alw26I	GTCTC	3 cut(s)	95, 497, 2060
AlwI	GGATC	2 cut(s)	1149, 2267
AlwNI	CAGNNNCTG	1 cut(s)	542
Ama87I	CYCGRG	1 cut(s)	599
AoxI	GGCC	8 cut(s)	1175, 1232, 1268, 1380, 1465, 1619, 1792, 2116
ApeKI	GCWGC	3 cut(s)	212, 215, 2166
ApoI	RAATTY	7 cut(s)	41, 688, 990, 1109, 1204, 1612, 2250
Asp700I	GAANNNNTTC	2 cut(s)	1708, 1755
AspLEI	GCGC	2 cut(s)	124, 2260
AspS9I	GGNCC	2 cut(s)	1440, 1808
AsuC2I	CCSGG	1 cut(s)	818
AsuHPI	GGTGA	6 cut(s)	342, 488, 587, 743, 1725, 1883
AvaI	CYCGRG	1 cut(s)	599
AvaII	GGWCC	2 cut(s)	1440, 1808
AxyI	CCTNAGG	1 cut(s)	397
BaeGI	GKGCMC	1 cut(s)	318
BalI	TGGCCA	1 cut(s)	2118
BanII	GRGCYC	1 cut(s)	952
BarI	GAAGNNNNNNTAC	2 cut(s)	1512, 1544
BbsI	GAAGAC	1 cut(s)	121
Bbv12I	GWGCWC	2 cut(s)	598, 952
BbvI	GCAGC	3 cut(s)	202, 224, 2178
BccI	CCATC	5 cut(s)	641, 653, 1306, 1476, 2332
BceAI	ACGGC	3 cut(s)	427, 1089, 1480
BcgI	CGANNNNNNTGC	2 cut(s)	580, 614
BciT130I	CCWGG	5 cut(s)	190, 222, 1231, 1438, 2277
BciVI	GTATCC	2 cut(s)	832, 1624
BcnI	CCSGG	1 cut(s)	818
BcoDI	GTCTC	3 cut(s)	95, 497, 2060
BfaI	CTAG	3 cut(s)	185, 609, 696
BfmI	CTRYAG	2 cut(s)	1236, 2061
BfuAI	ACCTGC	2 cut(s)	115, 1658
BfuI	GTATCC	2 cut(s)	832, 1624
BglII	AGATCT	2 cut(s)	327, 961
BisI	GCNGC	5 cut(s)	213, 216, 1175, 1383, 2167
BlsI	GCNGC	5 cut(s)	214, 217, 1176, 1384, 2168
Bme1390I	CCNGG	6 cut(s)	190, 222, 818, 1231, 1438, 2277
Bme18I	GGWCC	2 cut(s)	1440, 1808
BmeT110I	CYCGRG	1 cut(s)	599
BmgT120I	GGNCC	2 cut(s)	1440, 1808
BmiI	GGNNCC	2 cut(s)	633, 1809
BmrFI	CCNGG	6 cut(s)	190, 222, 818, 1231, 1438, 2277
BmsI	GCATC	7 cut(s)	376, 574, 727, 1037, 1085, 1582, 1662
BpiI	GAAGAC	1 cut(s)	121
BpmI	CTGGAG	1 cut(s)	966
Bpu10I	CCTNAGC	1 cut(s)	1179
BpuEI	CTTGAG	3 cut(s)	815, 1528, 1889
BpuMI	CCSGG	1 cut(s)	818
BsaHI	GRCGYC	3 cut(s)	88, 486, 671
BsaJI	CCNNGG	4 cut(s)	202, 220, 816, 1625
BsaXI	ACNNNNNCTCC	4 cut(s)	326, 356, 1521, 1551
Bsc4I	CCNNNNNNNGG	3 cut(s)	208, 375, 2048
Bse1I	ACTGG	3 cut(s)	1059, 1668, 2119
Bse21I	CCTNAGG	1 cut(s)	397
Bse3DI	GCAATG	4 cut(s)	723, 768, 1057, 1762
BseBI	CCWGG	5 cut(s)	190, 222, 1231, 1438, 2277
BseDI	CCNNGG	4 cut(s)	202, 220, 816, 1625
BseGI	GGATG	3 cut(s)	1028, 1317, 1597
BseLI	CCNNNNNNNGG	3 cut(s)	208, 375, 2048
BseMI	GCAATG	4 cut(s)	723, 768, 1057, 1762
BseMII	CTCAG	9 cut(s)	411, 791, 897, 1229, 1323, 1515, 1536, 1694, 1728
BseNI	ACTGG	3 cut(s)	1059, 1668, 2119
BseSI	GKGCMC	1 cut(s)	318
BseXI	GCAGC	3 cut(s)	202, 224, 2178
Bsh1236I	CGCG	1 cut(s)	450
BshFI	GGCC	8 cut(s)	1177, 1234, 1270, 1382, 1467, 1621, 1794, 2118
BsiHKAI	GWGCWC	2 cut(s)	598, 952
BsiHKCI	CYCGRG	1 cut(s)	599
BsiSI	CCGG	1 cut(s)	818
BslFI	GGGAC	1 cut(s)	430
BslI	CCNNNNNNNGG	3 cut(s)	208, 375, 2048
BsmAI	GTCTC	3 cut(s)	95, 497, 2060
BsmFI	GGGAC	1 cut(s)	430
BsmI	GAATGC	3 cut(s)	359, 1731, 2037
BsnI	GGCC	8 cut(s)	1177, 1234, 1270, 1382, 1467, 1621, 1794, 2118
BsoBI	CYCGRG	1 cut(s)	599
Bsp1286I	GDGCHC	3 cut(s)	318, 598, 952
Bsp1407I	TGTACA	1 cut(s)	1528
Bsp143I	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
BspACI	CCGC	6 cut(s)	207, 448, 1174, 1383, 1850, 2007
BspANI	GGCC	8 cut(s)	1177, 1234, 1270, 1382, 1467, 1621, 1794, 2118
BspCNI	CTCAG	9 cut(s)	410, 790, 898, 1228, 1324, 1514, 1537, 1693, 1729
BspFNI	CGCG	1 cut(s)	450
BspHI	TCATGA	1 cut(s)	292
BspLI	GGNNCC	2 cut(s)	633, 1809
BspMI	ACCTGC	2 cut(s)	115, 1658
BspPI	GGATC	2 cut(s)	1149, 2267
BspQI	GCTCTTC	2 cut(s)	1306, 1563
BsrDI	GCAATG	4 cut(s)	723, 768, 1057, 1762
BsrGI	TGTACA	1 cut(s)	1528
BsrI	ACTGG	3 cut(s)	1059, 1668, 2119
BssECI	CCNNGG	4 cut(s)	202, 220, 816, 1625
BssMI	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
BssNI	GRCGYC	3 cut(s)	88, 486, 671
Bst2UI	CCWGG	5 cut(s)	190, 222, 1231, 1438, 2277
Bst4CI	ACNGT	3 cut(s)	106, 495, 936
Bst6I	CTCTTC	5 cut(s)	272, 318, 474, 1306, 1563
BstACI	GRCGYC	3 cut(s)	88, 486, 671
BstAPI	GCANNNNNTGC	2 cut(s)	73, 593
BstAUI	TGTACA	1 cut(s)	1528
BstC8I	GCNNGC	4 cut(s)	29, 151, 589, 2171
BstDSI	CCRYGG	1 cut(s)	1625
BstENI	CCTNNNNNAGG	1 cut(s)	2046
BstF5I	GGATG	3 cut(s)	1028, 1317, 1597
BstFNI	CGCG	1 cut(s)	450
BstHHI	GCGC	2 cut(s)	124, 2260
BstKTI	GATC	7 cut(s)	292, 330, 964, 1136, 1144, 1191, 2275
BstMAI	GTCTC	3 cut(s)	95, 497, 2060
BstMBI	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
BstMWI	GCNNNNNNNGC	6 cut(s)	24, 73, 593, 1180, 2018, 2134
BstNI	CCWGG	5 cut(s)	190, 222, 1231, 1438, 2277
BstNSI	RCATGY	3 cut(s)	31, 35, 308
BstSCI	CCNGG	6 cut(s)	188, 220, 816, 1229, 1436, 2275
BstSFI	CTRYAG	2 cut(s)	1236, 2061
BstSLI	GKGCMC	1 cut(s)	318
BstUI	CGCG	1 cut(s)	450
BstV1I	GCAGC	3 cut(s)	202, 224, 2178
BstV2I	GAAGAC	1 cut(s)	121
BstX2I	RGATCY	2 cut(s)	327, 961
BstYI	RGATCY	2 cut(s)	327, 961
Bsu36I	CCTNAGG	1 cut(s)	397
BsuI	GTATCC	2 cut(s)	832, 1624
BsuRI	GGCC	8 cut(s)	1177, 1234, 1270, 1382, 1467, 1621, 1794, 2118
BtgI	CCRYGG	1 cut(s)	1625
BtsCI	GGATG	3 cut(s)	1028, 1317, 1597
BtsI	GCAGTG	2 cut(s)	598, 2275
BtsIMutI	CAGTG	4 cut(s)	261, 598, 1675, 2275
BveI	ACCTGC	2 cut(s)	115, 1658
Cac8I	GCNNGC	4 cut(s)	29, 151, 589, 2171
CaiI	CAGNNNCTG	1 cut(s)	542
CciI	TCATGA	1 cut(s)	292
CfoI	GCGC	2 cut(s)	124, 2260
Cfr13I	GGNCC	2 cut(s)	1440, 1808
CseI	GACGC	3 cut(s)	439, 494, 660
Csp6I	GTAC	3 cut(s)	1462, 1529, 1963
CviAII	CATG	8 cut(s)	28, 32, 293, 305, 356, 868, 1308, 2229
CviQI	GTAC	3 cut(s)	1462, 1529, 1963
DpnI	GATC	7 cut(s)	291, 329, 963, 1135, 1143, 1190, 2274
DpnII	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
DraI	TTTAAA	2 cut(s)	10, 1953
EaeI	YGGCCR	4 cut(s)	1380, 1465, 1792, 2116
Eam1104I	CTCTTC	5 cut(s)	272, 318, 474, 1306, 1563
EarI	CTCTTC	5 cut(s)	272, 318, 474, 1306, 1563
EciI	GGCGGA	1 cut(s)	2022
Ecl136II	GAGCTC	1 cut(s)	950
Eco147I	AGGCCT	1 cut(s)	1234
Eco24I	GRGCYC	1 cut(s)	952
Eco32I	GATATC	1 cut(s)	783
Eco47I	GGWCC	2 cut(s)	1440, 1808
Eco53kI	GAGCTC	1 cut(s)	950
Eco57I	CTGAAG	2 cut(s)	1346, 2223
Eco81I	CCTNAGG	1 cut(s)	397
Eco88I	CYCGRG	1 cut(s)	599
EcoICRI	GAGCTC	1 cut(s)	950
EcoNI	CCTNNNNNAGG	1 cut(s)	2046
EcoO109I	RGGNCCY	1 cut(s)	1808
EcoRII	CCWGG	5 cut(s)	188, 220, 1229, 1436, 2275
EcoRV	GATATC	1 cut(s)	783
EcoT22I	ATGCAT	2 cut(s)	33, 361
EcoT38I	GRGCYC	1 cut(s)	952
FaeI	CATG	8 cut(s)	31, 35, 296, 308, 359, 871, 1311, 2232
FalI	AAGNNNNNCTT	6 cut(s)	659, 691, 1882, 1914, 1898, 1930
FaqI	GGGAC	1 cut(s)	430
FatI	CATG	8 cut(s)	27, 31, 292, 304, 355, 867, 1307, 2228
FauI	CCCGC	2 cut(s)	200, 455
FauNDI	CATATG	3 cut(s)	1081, 1429, 1603
FblI	GTMKAC	2 cut(s)	453, 1326
Fnu4HI	GCNGC	5 cut(s)	213, 216, 1175, 1383, 2167
FokI	GGATG	3 cut(s)	1015, 1324, 1604
FriOI	GRGCYC	1 cut(s)	952
Fsp4HI	GCNGC	5 cut(s)	213, 216, 1175, 1383, 2167
FspBI	CTAG	3 cut(s)	185, 609, 696
FspI	TGCGCA	1 cut(s)	2259
GlaI	GCGC	2 cut(s)	123, 2259
GluI	GCNGC	5 cut(s)	213, 216, 1175, 1383, 2167
GsuI	CTGGAG	1 cut(s)	966
HaeIII	GGCC	8 cut(s)	1177, 1234, 1270, 1382, 1467, 1621, 1794, 2118
HapII	CCGG	1 cut(s)	818
HgaI	GACGC	3 cut(s)	439, 494, 660
HhaI	GCGC	2 cut(s)	124, 2260
Hin1I	GRCGYC	3 cut(s)	88, 486, 671
Hin1II	CATG	8 cut(s)	31, 35, 296, 308, 359, 871, 1311, 2232
Hin6I	GCGC	2 cut(s)	122, 2258
HinP1I	GCGC	2 cut(s)	122, 2258
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HindIII	AAGCTT	2 cut(s)	2030, 2171
HpaII	CCGG	1 cut(s)	818
HphI	GGTGA	6 cut(s)	342, 488, 587, 743, 1725, 1883
Hpy166II	GTNNAC	4 cut(s)	454, 1327, 1372, 1531
Hpy8I	GTNNAC	4 cut(s)	454, 1327, 1372, 1531
Hpy99I	CGWCG	3 cut(s)	90, 93, 455
HpyAV	CCTTC	7 cut(s)	231, 357, 1509, 1514, 1766, 1964, 2079
HpyCH4III	ACNGT	3 cut(s)	106, 495, 936
HpyCH4IV	ACGT	2 cut(s)	88, 2323
HpyF10VI	GCNNNNNNNGC	6 cut(s)	24, 73, 593, 1180, 2018, 2134
HpySE526I	ACGT	2 cut(s)	88, 2323
Hsp92I	GRCGYC	3 cut(s)	88, 486, 671
Hsp92II	CATG	8 cut(s)	31, 35, 296, 308, 359, 871, 1311, 2232
HspAI	GCGC	2 cut(s)	122, 2258
Kzo9I	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
LguI	GCTCTTC	2 cut(s)	1306, 1563
LmnI	GCTCC	7 cut(s)	290, 402, 745, 947, 955, 2009, 2134
Lsp1109I	GCAGC	3 cut(s)	202, 224, 2178
LweI	GCATC	7 cut(s)	376, 574, 727, 1037, 1085, 1582, 1662
MaeI	CTAG	3 cut(s)	185, 609, 696
MaeII	ACGT	2 cut(s)	88, 2323
MaeIII	GTNAC	5 cut(s)	575, 979, 1145, 1688, 2074
MalI	GATC	7 cut(s)	291, 329, 963, 1135, 1143, 1190, 2274
MboI	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
MfeI	CAATTG	3 cut(s)	309, 927, 1643
MflI	RGATCY	2 cut(s)	327, 961
MhlI	GDGCHC	3 cut(s)	318, 598, 952
MlsI	TGGCCA	1 cut(s)	2118
MluNI	TGGCCA	1 cut(s)	2118
MlyI	GAGTC	2 cut(s)	168, 260
MmeI	TCCRAC	3 cut(s)	196, 480, 2112
Mox20I	TGGCCA	1 cut(s)	2118
Mph1103I	ATGCAT	2 cut(s)	33, 361
MroXI	GAANNNNTTC	2 cut(s)	1708, 1755
MscI	TGGCCA	1 cut(s)	2118
MseI	TTAA	8 cut(s)	9, 56, 108, 116, 1020, 1775, 1952, 1976
MslI	CAYNNNNRTG	1 cut(s)	254
Msp20I	TGGCCA	1 cut(s)	2118
MspA1I	CMGCKG	4 cut(s)	161, 215, 1684, 1852
MspI	CCGG	1 cut(s)	818
MspR9I	CCNGG	6 cut(s)	190, 222, 818, 1231, 1438, 2277
MssI	GTTTAAAC	1 cut(s)	10
MunI	CAATTG	3 cut(s)	309, 927, 1643
Mva1269I	GAATGC	3 cut(s)	359, 1731, 2037
MvaI	CCWGG	5 cut(s)	190, 222, 1231, 1438, 2277
MvnI	CGCG	1 cut(s)	450
MwoI	GCNNNNNNNGC	6 cut(s)	24, 73, 593, 1180, 2018, 2134
NciI	CCSGG	1 cut(s)	818
NdeI	CATATG	3 cut(s)	1081, 1429, 1603
NdeII	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
NlaIII	CATG	8 cut(s)	31, 35, 296, 308, 359, 871, 1311, 2232
NlaIV	GGNNCC	2 cut(s)	633, 1809
NmuCI	GTSAC	3 cut(s)	575, 1145, 1688
NsbI	TGCGCA	1 cut(s)	2259
NsiI	ATGCAT	2 cut(s)	33, 361
NspI	RCATGY	3 cut(s)	31, 35, 308
PaeI	GCATGC	1 cut(s)	31
PaeR7I	CTCGAG	1 cut(s)	599
PagI	TCATGA	1 cut(s)	292
PceI	AGGCCT	1 cut(s)	1234
PciSI	GCTCTTC	2 cut(s)	1306, 1563
PctI	GAATGC	3 cut(s)	359, 1731, 2037
PdmI	GAANNNNTTC	2 cut(s)	1708, 1755
PkrI	GCNGC	5 cut(s)	214, 217, 1176, 1384, 2168
PleI	GAGTC	2 cut(s)	168, 260
PmeI	GTTTAAAC	1 cut(s)	10
PpsI	GAGTC	2 cut(s)	168, 260
PpuMI	RGGWCCY	1 cut(s)	1808
Psp124BI	GAGCTC	1 cut(s)	952
Psp5II	RGGWCCY	1 cut(s)	1808
Psp6I	CCWGG	5 cut(s)	188, 220, 1229, 1436, 2275
PspGI	CCWGG	5 cut(s)	188, 220, 1229, 1436, 2275
PspN4I	GGNNCC	2 cut(s)	633, 1809
PspPI	GGNCC	2 cut(s)	1440, 1808
PspPPI	RGGWCCY	1 cut(s)	1808
PstNI	CAGNNNCTG	1 cut(s)	542
PsuI	RGATCY	2 cut(s)	327, 961
PvuII	CAGCTG	3 cut(s)	161, 215, 1684
RsaI	GTAC	3 cut(s)	1463, 1530, 1964
RsaNI	GTAC	3 cut(s)	1462, 1529, 1963
RseI	CAYNNNNRTG	1 cut(s)	254
SacI	GAGCTC	1 cut(s)	952
SalI	GTCGAC	1 cut(s)	452
SapI	GCTCTTC	2 cut(s)	1306, 1563
SaqAI	TTAA	8 cut(s)	9, 56, 108, 116, 1020, 1775, 1952, 1976
SatI	GCNGC	5 cut(s)	213, 216, 1175, 1383, 2167
Sau3AI	GATC	7 cut(s)	289, 327, 961, 1133, 1141, 1188, 2272
Sau96I	GGNCC	2 cut(s)	1440, 1808
SchI	GAGTC	2 cut(s)	168, 260
ScrFI	CCNGG	6 cut(s)	190, 222, 818, 1231, 1438, 2277
SduI	GDGCHC	3 cut(s)	318, 598, 952
SfaNI	GCATC	7 cut(s)	376, 574, 727, 1037, 1085, 1582, 1662
SfcI	CTRYAG	2 cut(s)	1236, 2061
Sfr274I	CTCGAG	1 cut(s)	599
SinI	GGWCC	2 cut(s)	1440, 1808
SlaI	CTCGAG	1 cut(s)	599
SmiMI	CAYNNNNRTG	1 cut(s)	254
SmlI	CTYRAG	4 cut(s)	599, 794, 1507, 1904
SmoI	CTYRAG	4 cut(s)	599, 794, 1507, 1904
SphI	GCATGC	1 cut(s)	31
SseBI	AGGCCT	1 cut(s)	1234
SsiI	CCGC	6 cut(s)	207, 448, 1174, 1383, 1850, 2007
SspMI	CTAG	3 cut(s)	185, 609, 696
SstI	GAGCTC	1 cut(s)	952
StuI	AGGCCT	1 cut(s)	1234
StyD4I	CCNGG	6 cut(s)	188, 220, 816, 1229, 1436, 2275
TaaI	ACNGT	3 cut(s)	106, 495, 936
TaiI	ACGT	2 cut(s)	91, 2326
TaqI	TCGA	5 cut(s)	235, 269, 453, 600, 1132
TatI	WGTACW	1 cut(s)	1528
TauI	GCSGC	2 cut(s)	1177, 1385
Tru1I	TTAA	8 cut(s)	9, 56, 108, 116, 1020, 1775, 1952, 1976
Tru9I	TTAA	8 cut(s)	9, 56, 108, 116, 1020, 1775, 1952, 1976
TscAI	CASTG	4 cut(s)	268, 598, 1675, 2275
TseFI	GTSAC	3 cut(s)	575, 1145, 1688
TseI	GCWGC	3 cut(s)	212, 215, 2166
Tsp45I	GTSAC	3 cut(s)	575, 1145, 1688
TspDTI	ATGAA	9 cut(s)	217, 309, 701, 717, 734, 840, 864, 1748, 2201
TspGWI	ACGGA	1 cut(s)	1614
TspRI	CASTG	4 cut(s)	268, 598, 1675, 2275
VpaK11BI	GGWCC	2 cut(s)	1440, 1808
XagI	CCTNNNNNAGG	1 cut(s)	2046
XapI	RAATTY	7 cut(s)	41, 688, 990, 1109, 1204, 1612, 2250
XbaI	TCTAGA	1 cut(s)	695
XceI	RCATGY	3 cut(s)	31, 35, 308
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1434
XhoI	CTCGAG	1 cut(s)	599
XmiI	GTMKAC	2 cut(s)	453, 1326
XmnI	GAANNNNTTC	2 cut(s)	1708, 1755
XspI	CTAG	3 cut(s)	185, 609, 696
ZraI	GACGTC	1 cut(s)	89
Zsp2I	ATGCAT	2 cut(s)	33, 361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.