Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0004950

Physical Location & Seq

Genomic Coordinates Forward (+)

233533 .. 245856

Gene Structure 12324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g00140.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGCTCTTCTTGCAACCAACAACACACAGGGTCACTCTTATGATGACAGTAATGACGCCCACAAATCTGTATTTGATTTGGGTGCTTTTGTTGGGGACTTGACTGTTGAGGAGGATGCTAGCAGTGATGACATATCATTGGAAGGACTTGAACAAGAATTAGAAGAATGTAAACGTGATGACGATGTTGCGGATATTTTGTCTAAGGGTACGAAACTACGGGATTATACAAAGGGGGTTGAGAACAACAAACGAAAAGTTGAACTGGACTCAATCCAGGATTATATTAAAGAAAGTGATAAACTAGTATCTCTTCATGATGAAATTCGTGATTGTGACAGCATCTTGTCACAGATGGAAACTCTTCTCAGTGGATTTCAGGCAGAGATAGGTTCAATAAGTTCCGACATCAAAATTCTCCAGGAAAAGTCTATGGATATGGGTTTAAAGTTGAAGAATCGCAAGGTGGCTGAGTCAAATTTGGCAAAATTTGTTGAAGACATTATAATCCCTCCAAGGATGGTAGATATAATTGGTGATGGCGAGGTGAACGATGAATATATGAGAACTCTAGAGAGTCTTAGCAAGAAGCTGAAGTTTGTTGAAGCGGATCTTATGGTTAAATCTGCAAAAGCTTTAAAAGATGTTCAGCCTGAGCTCGAAAAACTTAGACAGAAAGCAGTCTCCAAGGTGTTTGACTTCATTGTGCAGAAGCTTTATGCATTGAGAAAACCTAAAACTAACATCCAGATTCTTCAACAGAATGTTCTCTTAAAGTACAAGTATGTTATTTCATTCCTCAAGGAACATGGAAAGGAGGTATACATTGAAGTTCGTGGAGCATACATCGACACAATGAACAAGGTGCTAAGTGCACATTTCCGTGCTTATATTCAGGCACTAGAGAAACTACAGTTGGATATTGCCACATCTAGTGACTTAATTGGCGTGGATACGAGAAATACAAGTCTATTTTCAAGAGCAAGGGAACCACTGAAGAACCGGTCGGCTGTTTTTGCTCTTGGAGAGAGGATTAAAATTTTAAAGGAAATTGAAGAACCTGCATTAATTCCACATATAGCTGAAGCCAGCTCCATCAAGTATCCGTATGAGGTGCTCTTCAGGAGCTTGCACAAGCTGCTTATGGACACTGCTACTTCTGAGTACCATTTCTGTGATGATTTCTTTTGCGAAGAATCCATATTCTATGAAATTTTTGCAGGGAAGGATAAAAAGAAAAAGAGGCTCCATTTGATGACTTTAGTATGCTTTTTGACACCAGGTCCATTTGCTGTAATTGATGAACACTTCAATTCAATACTCCCAAATTGTTATGATGCTATTGGTGTAATGCTTATGATCCGCATTATACACCAGCACCAGCTCATTATGTCTCGGCGGCGTATCCCATGCTTGGATTCATACTTAGACAAGATCAACATTGCCCTTTGGCCTCGTTTTAAGATGGTGTTTGACCTGCATCTCAACAGCCTGCGCAATGCGAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCACTATGTCATGAGGCGATATGCTGAATTCACAGCTTCACTTATCCACCTCAATGTTGAATATGGAGATGGGCAGCTTGAATTAAATTTGGAAAGACTGAGAATGGCTGTTGATGACTTGCTTATCAAGCTTGCCAAAGCATTTCCAAGACCAAAACTGCAAACTGTGTTTCTGATAAACAACTACGATATGACTATTGCAGTATTGAAGGAAGCTGGCCCGGAAGGTGGTAAAATTCAAATCCACTTTGAGGAACTGCTTAAAAGCAACACAGCATTATATGTGGAAGAACTATTACTAGAGCATTTTAGTGATTTAATCAAGTTTGTCAAAACCCGGGCTTCGGAGGACCCAGGTGCAAATGCTGAGAATCCTATAACTGGTGCAGAGGTTGAGCCGCTTGTGAAGGACTTTGCAAGTAGATGGAAAGCTGCAATTGAGCTGATGCACAAGGATGTCATAACTTCTTTTAGCAACTTTTTGTGTGGCATGGAAATCTTGAGAGCTGCATTGACTCAACTACTGCTCTATTATACTAGGCTCTCAGATTGCATAAAGAATATTGTTGGTGGGTCTACTCTTAACAAGGATTTAGTGTCCATATCGTCAATCATGTACGAAATTAAGAAATACTCGAGGACTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000149 GO:0000902 GO:0000904 GO:0000938 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006892 GO:0006896 GO:0007034 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0016482 GO:0017016 GO:0017137 GO:0019899 GO:0019905 GO:0019953 GO:0022414 GO:0030154 GO:0031090 GO:0031267 GO:0031410 GO:0031982 GO:0031984 GO:0032456 GO:0032501 GO:0032502 GO:0032588 GO:0032989 GO:0032991 GO:0040007 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044706 GO:0046907 GO:0048193 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051020 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0060560 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps52

Protein Analysis

729

Amino Acids

83.22

Weight (kDa)

5.79

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec3_CC	PF09763	18 - 135	9.3e-08	Exocyst complex component Sec3, coiled-coil
Vps52_CC	PF04129	35 - 208	5.8e-65	Vps52/Sac2 family, coiled-coil
Vps52_C	PF20655	225 - 529	1.4e-128	Vps52, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71270 AT1G71300 AT1G71300
fragaria_vesca	FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140
malus_domestica	MD08G1244900.v1.1 MD15G1440000.v1.1
prunus_persica	Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1
pyrus_communis	pycom08g21240 pycom15g38790
rosa_chinensis	RchiOBHm_Chr6g0249411
rosa_laevigata	RLG00000015582
rosa_multiflora	Rmu_sc0000278.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217740
rosa_rugosa	Rorug05G0492100
rosa_samantha	Rh6AG002000 Rh6BG008200 Rh6CG001100 Rh6DG001200
rosa_wichuraiana	Rw6G000250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	506
Acc16I	TGCGCA	1 cut(s)	1496
Acc36I	ACCTGC	2 cut(s)	1069, 1485
AccI	GTMKAC	2 cut(s)	822, 2114
AciI	CCGC	5 cut(s)	191, 608, 1363, 1399, 1937
AclWI	GGATC	2 cut(s)	618, 1354
AcsI	RAATTY	9 cut(s)	324, 414, 478, 488, 1038, 1212, 1565, 1624, 1773
AcuI	CTGAAG	4 cut(s)	614, 1016, 1104, 1105
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	4 cut(s)	211, 779, 1166, 2156
AfiI	CCNNNNNNNGG	5 cut(s)	1414, 1766, 1789, 1882, 1919
AgeI	ACCGGT	1 cut(s)	1002
AhdI	GACNNNNNGTC	1 cut(s)	1281
AhlI	ACTAGT	1 cut(s)	304
AjnI	CCWGG	4 cut(s)	276, 420, 1279, 1891
AjuI	GAANNNNNNNTTGG	2 cut(s)	899, 931
Alw21I	GWGCWC	3 cut(s)	660, 877, 1119
Alw26I	GTCTC	2 cut(s)	688, 1398
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	2 cut(s)	618, 1354
Ama87I	CYCGRG	2 cut(s)	1875, 2173
AoxI	GGCC	2 cut(s)	1451, 1756
ApaLI	GTGCAC	1 cut(s)	873
ApeKI	GCWGC	4 cut(s)	1138, 1612, 1970, 2045
ApoI	RAATTY	9 cut(s)	324, 414, 478, 488, 1038, 1212, 1565, 1624, 1773
AseI	ATTAAT	1 cut(s)	1067
AsiGI	ACCGGT	1 cut(s)	1002
Asp700I	GAANNNNTTC	1 cut(s)	363
AspLEI	GCGC	1 cut(s)	1497
AspS9I	GGNCC	3 cut(s)	1283, 1757, 1888
AsuC2I	CCSGG	3 cut(s)	1760, 1876, 1877
AsuHPI	GGTGA	2 cut(s)	548, 559
AsuNHI	GCTAGC	1 cut(s)	119
AvaI	CYCGRG	2 cut(s)	1875, 2173
AvaII	GGWCC	2 cut(s)	1283, 1888
BaeGI	GKGCMC	1 cut(s)	877
BanII	GRGCYC	1 cut(s)	660
BarI	GAAGNNNNNNTAC	2 cut(s)	1818, 1850
BbsI	GAAGAC	2 cut(s)	504, 1517
Bbv12I	GWGCWC	3 cut(s)	660, 877, 1119
BbvI	GCAGC	4 cut(s)	1125, 1624, 1957, 2032
BccI	CCATC	7 cut(s)	349, 514, 533, 1103, 1459, 1601, 1956
BciT130I	CCWGG	4 cut(s)	278, 422, 1281, 1893
BciVI	GTATCC	3 cut(s)	946, 1113, 1415
BcnI	CCSGG	3 cut(s)	1760, 1876, 1877
BcoDI	GTCTC	2 cut(s)	688, 1398
BcuI	ACTAGT	1 cut(s)	304
BfaI	CTAG	7 cut(s)	120, 305, 572, 902, 933, 1838, 2076
BfmI	CTRYAG	1 cut(s)	911
BfuAI	ACCTGC	2 cut(s)	1069, 1485
BfuI	GTATCC	3 cut(s)	946, 1113, 1415
BisI	GCNGC	6 cut(s)	1139, 1400, 1613, 1937, 1971, 2046
BlsI	GCNGC	6 cut(s)	1140, 1401, 1614, 1938, 1972, 2047
Bme1390I	CCNGG	7 cut(s)	278, 422, 1281, 1760, 1876, 1877, 1893
Bme18I	GGWCC	2 cut(s)	1283, 1888
BmeRI	GACNNNNNGTC	1 cut(s)	1281
BmeT110I	CYCGRG	2 cut(s)	1875, 2173
BmgT120I	GGNCC	3 cut(s)	1283, 1757, 1888
BmiI	GGNNCC	3 cut(s)	990, 1247, 1890
BmrFI	CCNGG	7 cut(s)	278, 422, 1281, 1760, 1876, 1877, 1893
BmsI	GCATC	5 cut(s)	106, 351, 1327, 1489, 1974
BmtI	GCTAGC	1 cut(s)	123
BpiI	GAAGAC	2 cut(s)	504, 1517
BpmI	CTGGAG	1 cut(s)	404
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	2 cut(s)	785, 2059
BpuMI	CCSGG	3 cut(s)	1760, 1876, 1877
BsaBI	GATNNNNATC	1 cut(s)	1533
BsaHI	GRCGYC	1 cut(s)	57
BsaJI	CCNNGG	4 cut(s)	515, 687, 1875, 1891
BsaWI	WCCGGW	1 cut(s)	1002
Bsc4I	CCNNNNNNNGG	5 cut(s)	1414, 1766, 1789, 1882, 1919
Bse118I	RCCGGY	1 cut(s)	1002
Bse1I	ACTGG	2 cut(s)	270, 1924
Bse3DI	GCAATG	2 cut(s)	1440, 1504
Bse8I	GATNNNNATC	1 cut(s)	1533
BseBI	CCWGG	4 cut(s)	278, 422, 1281, 1893
BseDI	CCNNGG	4 cut(s)	515, 687, 1875, 1891
BseGI	GGATG	5 cut(s)	121, 525, 744, 1534, 1999
BseJI	GATNNNNATC	1 cut(s)	1533
BseLI	CCNNNNNNNGG	5 cut(s)	1414, 1766, 1789, 1882, 1919
BseMI	GCAATG	2 cut(s)	1440, 1504
BseMII	CTCAG	7 cut(s)	382, 462, 645, 1152, 1628, 1896, 2097
BseNI	ACTGG	2 cut(s)	270, 1924
BseRI	GAGGAG	1 cut(s)	125
BseSI	GKGCMC	1 cut(s)	877
BseXI	GCAGC	4 cut(s)	1125, 1624, 1957, 2032
BsgI	GTGCAG	2 cut(s)	728, 1944
Bsh1285I	CGRYCG	1 cut(s)	1007
BshFI	GGCC	2 cut(s)	1453, 1758
BshTI	ACCGGT	1 cut(s)	1002
BsiEI	CGRYCG	1 cut(s)	1007
BsiHKAI	GWGCWC	3 cut(s)	660, 877, 1119
BsiHKCI	CYCGRG	2 cut(s)	1875, 2173
BsiSI	CCGG	3 cut(s)	1003, 1760, 1876
BslFI	GGGAC	1 cut(s)	110
BslI	CCNNNNNNNGG	5 cut(s)	1414, 1766, 1789, 1882, 1919
BsmAI	GTCTC	2 cut(s)	688, 1398
BsmFI	GGGAC	1 cut(s)	110
BsnI	GGCC	2 cut(s)	1453, 1758
BsoBI	CYCGRG	2 cut(s)	1875, 2173
Bsp1286I	GDGCHC	3 cut(s)	660, 877, 1119
Bsp143I	GATC	3 cut(s)	610, 1359, 1434
BspACI	CCGC	5 cut(s)	191, 608, 1363, 1399, 1937
BspANI	GGCC	2 cut(s)	1453, 1758
BspCNI	CTCAG	7 cut(s)	381, 463, 646, 1153, 1629, 1897, 2096
BspHI	TCATGA	2 cut(s)	316, 1548
BspLI	GGNNCC	3 cut(s)	990, 1247, 1890
BspMI	ACCTGC	2 cut(s)	1069, 1485
BspOI	GCTAGC	1 cut(s)	123
BspPI	GGATC	2 cut(s)	618, 1354
BspQI	GCTCTTC	2 cut(s)	12, 1124
BsrDI	GCAATG	2 cut(s)	1440, 1504
BsrFI	RCCGGY	1 cut(s)	1002
BsrI	ACTGG	2 cut(s)	270, 1924
BssAI	RCCGGY	1 cut(s)	1002
BssECI	CCNNGG	4 cut(s)	515, 687, 1875, 1891
BssMI	GATC	3 cut(s)	610, 1359, 1434
BssNAI	GTATAC	1 cut(s)	823
BssNI	GRCGYC	1 cut(s)	57
BssT1I	CCWWGG	2 cut(s)	515, 687
Bst1107I	GTATAC	1 cut(s)	823
Bst2UI	CCWGG	4 cut(s)	278, 422, 1281, 1893
Bst4CI	ACNGT	4 cut(s)	50, 106, 915, 1705
Bst6I	CTCTTC	4 cut(s)	12, 318, 369, 1124
BstACI	GRCGYC	1 cut(s)	57
BstAPI	GCANNNNNTGC	1 cut(s)	1138
BstC8I	GCNNGC	6 cut(s)	121, 1090, 1130, 1493, 1671, 1756
BstF5I	GGATG	5 cut(s)	121, 525, 744, 1534, 1999
BstHHI	GCGC	1 cut(s)	1497
BstKTI	GATC	3 cut(s)	613, 1362, 1437
BstMAI	GTCTC	2 cut(s)	688, 1398
BstMBI	GATC	3 cut(s)	610, 1359, 1434
BstMCI	CGRYCG	1 cut(s)	1007
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1666
BstNI	CCWGG	4 cut(s)	278, 422, 1281, 1893
BstSCI	CCNGG	7 cut(s)	276, 420, 1279, 1758, 1874, 1875, 1891
BstSFI	CTRYAG	1 cut(s)	911
BstSLI	GKGCMC	1 cut(s)	877
BstV1I	GCAGC	4 cut(s)	1125, 1624, 1957, 2032
BstV2I	GAAGAC	2 cut(s)	504, 1517
BstX2I	RGATCY	1 cut(s)	610
BstYI	RGATCY	1 cut(s)	610
BstZ17I	GTATAC	1 cut(s)	823
BsuI	GTATCC	3 cut(s)	946, 1113, 1415
BsuRI	GGCC	2 cut(s)	1453, 1758
BtsCI	GGATG	5 cut(s)	121, 525, 744, 1534, 1999
BtsI	GCAGTG	2 cut(s)	130, 1149
BtsIMutI	CAGTG	4 cut(s)	130, 376, 992, 1149
BveI	ACCTGC	2 cut(s)	1069, 1485
Cac8I	GCNNGC	6 cut(s)	121, 1090, 1130, 1493, 1671, 1756
CciI	TCATGA	2 cut(s)	316, 1548
CfoI	GCGC	1 cut(s)	1497
Cfr10I	RCCGGY	1 cut(s)	1002
Cfr13I	GGNCC	3 cut(s)	1283, 1757, 1888
Cfr9I	CCCGGG	1 cut(s)	1875
CseI	GACGC	1 cut(s)	65
CsiI	ACCWGGT	1 cut(s)	1279
Csp6I	GTAC	4 cut(s)	210, 778, 1165, 2155
CspAI	ACCGGT	1 cut(s)	1002
CviAII	CATG	6 cut(s)	317, 809, 1410, 1549, 2029, 2152
CviQI	GTAC	4 cut(s)	210, 778, 1165, 2155
DpnI	GATC	3 cut(s)	612, 1361, 1436
DpnII	GATC	3 cut(s)	610, 1359, 1434
DraI	TTTAAA	3 cut(s)	447, 639, 1044
DriI	GACNNNNNGTC	1 cut(s)	1281
Eam1104I	CTCTTC	4 cut(s)	12, 318, 369, 1124
Eam1105I	GACNNNNNGTC	1 cut(s)	1281
EarI	CTCTTC	4 cut(s)	12, 318, 369, 1124
Ecl136II	GAGCTC	1 cut(s)	658
Eco130I	CCWWGG	2 cut(s)	515, 687
Eco24I	GRGCYC	1 cut(s)	660
Eco47I	GGWCC	2 cut(s)	1283, 1888
Eco53kI	GAGCTC	1 cut(s)	658
Eco57I	CTGAAG	4 cut(s)	614, 1016, 1104, 1105
Eco88I	CYCGRG	2 cut(s)	1875, 2173
EcoICRI	GAGCTC	1 cut(s)	658
EcoO109I	RGGNCCY	1 cut(s)	1888
EcoRI	GAATTC	1 cut(s)	1565
EcoRII	CCWGG	4 cut(s)	276, 420, 1279, 1891
EcoT14I	CCWWGG	2 cut(s)	515, 687
EcoT22I	ATGCAT	1 cut(s)	724
EcoT38I	GRGCYC	1 cut(s)	660
ErhI	CCWWGG	2 cut(s)	515, 687
FaeI	CATG	6 cut(s)	320, 812, 1413, 1552, 2032, 2155
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FaqI	GGGAC	1 cut(s)	110
FatI	CATG	6 cut(s)	316, 808, 1409, 1548, 2028, 2151
FblI	GTMKAC	2 cut(s)	822, 2114
Fnu4HI	GCNGC	6 cut(s)	1139, 1400, 1613, 1937, 1971, 2046
FokI	GGATG	5 cut(s)	128, 532, 731, 1521, 2006
FriOI	GRGCYC	1 cut(s)	660
Fsp4HI	GCNGC	6 cut(s)	1139, 1400, 1613, 1937, 1971, 2046
FspBI	CTAG	7 cut(s)	120, 305, 572, 902, 933, 1838, 2076
FspI	TGCGCA	1 cut(s)	1496
GlaI	GCGC	1 cut(s)	1496
GluI	GCNGC	6 cut(s)	1139, 1400, 1613, 1937, 1971, 2046
GsuI	CTGGAG	1 cut(s)	404
HaeIII	GGCC	2 cut(s)	1453, 1758
HapII	CCGG	3 cut(s)	1003, 1760, 1876
HgaI	GACGC	1 cut(s)	65
HhaI	GCGC	1 cut(s)	1497
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	6 cut(s)	320, 812, 1413, 1552, 2032, 2155
Hin6I	GCGC	1 cut(s)	1495
HinP1I	GCGC	1 cut(s)	1495
HindIII	AAGCTT	3 cut(s)	633, 713, 1667
HinfI	GANTC	9 cut(s)	269, 457, 473, 577, 751, 1196, 1418, 1909, 2053
HpaII	CCGG	3 cut(s)	1003, 1760, 1876
HphI	GGTGA	2 cut(s)	548, 559
Hpy166II	GTNNAC	5 cut(s)	173, 550, 823, 875, 2115
Hpy188I	TCNGA	5 cut(s)	406, 1162, 1713, 1885, 2086
Hpy188III	TCNNGA	8 cut(s)	317, 329, 572, 748, 978, 1123, 1549, 2038
Hpy8I	GTNNAC	5 cut(s)	173, 550, 823, 875, 2115
HpyAV	CCTTC	5 cut(s)	137, 1219, 1741, 1757, 1939
HpyCH4III	ACNGT	4 cut(s)	50, 106, 915, 1705
HpyCH4IV	ACGT	1 cut(s)	175
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1666
HpySE526I	ACGT	1 cut(s)	175
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	6 cut(s)	320, 812, 1413, 1552, 2032, 2155
HspAI	GCGC	1 cut(s)	1495
Kzo9I	GATC	3 cut(s)	610, 1359, 1434
LguI	GCTCTTC	2 cut(s)	12, 1124
LmnI	GCTCC	4 cut(s)	839, 1097, 1125, 1251
Lsp1109I	GCAGC	4 cut(s)	1125, 1624, 1957, 2032
LweI	GCATC	5 cut(s)	106, 351, 1327, 1489, 1974
MabI	ACCWGGT	1 cut(s)	1279
MaeI	CTAG	7 cut(s)	120, 305, 572, 902, 933, 1838, 2076
MaeII	ACGT	1 cut(s)	175
MaeIII	GTNAC	4 cut(s)	32, 335, 348, 935
MalI	GATC	3 cut(s)	612, 1361, 1436
MboI	GATC	3 cut(s)	610, 1359, 1434
MfeI	CAATTG	1 cut(s)	1974
MflI	RGATCY	1 cut(s)	610
MhlI	GDGCHC	3 cut(s)	660, 877, 1119
MlyI	GAGTC	4 cut(s)	263, 482, 586, 2047
MmeI	TCCRAC	2 cut(s)	429, 897
Mph1103I	ATGCAT	1 cut(s)	724
MroXI	GAANNNNTTC	1 cut(s)	363
MslI	CAYNNNNRTG	6 cut(s)	39, 882, 1173, 1590, 1848, 1992
MspI	CCGG	3 cut(s)	1003, 1760, 1876
MspR9I	CCNGG	7 cut(s)	278, 422, 1281, 1760, 1876, 1877, 1893
MunI	CAATTG	1 cut(s)	1974
MvaI	CCWGG	4 cut(s)	278, 422, 1281, 1893
MwoI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1666
NciI	CCSGG	3 cut(s)	1760, 1876, 1877
NdeII	GATC	3 cut(s)	610, 1359, 1434
NheI	GCTAGC	1 cut(s)	119
NlaIII	CATG	6 cut(s)	320, 812, 1413, 1552, 2032, 2155
NlaIV	GGNNCC	3 cut(s)	990, 1247, 1890
NmeAIII	GCCGAG	1 cut(s)	1375
NmuCI	GTSAC	4 cut(s)	32, 335, 348, 935
NsbI	TGCGCA	1 cut(s)	1496
NsiI	ATGCAT	1 cut(s)	724
PaeR7I	CTCGAG	1 cut(s)	2173
PagI	TCATGA	2 cut(s)	316, 1548
PciSI	GCTCTTC	2 cut(s)	12, 1124
PdmI	GAANNNNTTC	1 cut(s)	363
PfeI	GAWTC	5 cut(s)	457, 751, 1196, 1418, 1909
PfoI	TCCNGGA	2 cut(s)	276, 420
PinAI	ACCGGT	1 cut(s)	1002
PkrI	GCNGC	6 cut(s)	1140, 1401, 1614, 1938, 1972, 2047
PleI	GAGTC	4 cut(s)	263, 481, 585, 2047
PpsI	GAGTC	4 cut(s)	263, 481, 585, 2047
PpuMI	RGGWCCY	1 cut(s)	1888
PshBI	ATTAAT	1 cut(s)	1067
PsiI	TTATAA	1 cut(s)	506
Psp124BI	GAGCTC	1 cut(s)	660
Psp5II	RGGWCCY	1 cut(s)	1888
Psp6I	CCWGG	4 cut(s)	276, 420, 1279, 1891
PspGI	CCWGG	4 cut(s)	276, 420, 1279, 1891
PspN4I	GGNNCC	3 cut(s)	990, 1247, 1890
PspPI	GGNCC	3 cut(s)	1283, 1757, 1888
PspPPI	RGGWCCY	1 cut(s)	1888
PspXI	VCTCGAGB	1 cut(s)	2173
PsuI	RGATCY	1 cut(s)	610
RsaI	GTAC	4 cut(s)	211, 779, 1166, 2156
RsaNI	GTAC	4 cut(s)	210, 778, 1165, 2155
RseI	CAYNNNNRTG	6 cut(s)	39, 882, 1173, 1590, 1848, 1992
SacI	GAGCTC	1 cut(s)	660
SapI	GCTCTTC	2 cut(s)	12, 1124
SatI	GCNGC	6 cut(s)	1139, 1400, 1613, 1937, 1971, 2046
Sau3AI	GATC	3 cut(s)	610, 1359, 1434
Sau96I	GGNCC	3 cut(s)	1283, 1757, 1888
SchI	GAGTC	4 cut(s)	263, 482, 586, 2047
ScrFI	CCNGG	7 cut(s)	278, 422, 1281, 1760, 1876, 1877, 1893
SduI	GDGCHC	3 cut(s)	660, 877, 1119
SexAI	ACCWGGT	1 cut(s)	1279
SfaNI	GCATC	5 cut(s)	106, 351, 1327, 1489, 1974
SfcI	CTRYAG	1 cut(s)	911
Sfr274I	CTCGAG	1 cut(s)	2173
SinI	GGWCC	2 cut(s)	1283, 1888
SlaI	CTCGAG	1 cut(s)	2173
SmaI	CCCGGG	1 cut(s)	1877
SmiMI	CAYNNNNRTG	6 cut(s)	39, 882, 1173, 1590, 1848, 1992
SmlI	CTYRAG	3 cut(s)	800, 2038, 2173
SmoI	CTYRAG	3 cut(s)	800, 2038, 2173
SpeI	ACTAGT	1 cut(s)	304
SsiI	CCGC	5 cut(s)	191, 608, 1363, 1399, 1937
SspI	AATATT	1 cut(s)	2101
SspMI	CTAG	7 cut(s)	120, 305, 572, 902, 933, 1838, 2076
SstI	GAGCTC	1 cut(s)	660
StyD4I	CCNGG	7 cut(s)	276, 420, 1279, 1758, 1874, 1875, 1891
StyI	CCWWGG	2 cut(s)	515, 687
TaaI	ACNGT	4 cut(s)	50, 106, 915, 1705
TaiI	ACGT	1 cut(s)	178
TaqI	TCGA	3 cut(s)	660, 849, 2174
TatI	WGTACW	1 cut(s)	777
TauI	GCSGC	2 cut(s)	1402, 1939
TfiI	GAWTC	5 cut(s)	457, 751, 1196, 1418, 1909
TscAI	CASTG	4 cut(s)	130, 376, 999, 1156
TseFI	GTSAC	4 cut(s)	32, 335, 348, 935
TseI	GCWGC	4 cut(s)	1138, 1612, 1970, 2045
Tsp45I	GTSAC	4 cut(s)	32, 335, 348, 935
TspGWI	ACGGA	2 cut(s)	872, 1095
TspMI	CCCGGG	1 cut(s)	1875
TspRI	CASTG	4 cut(s)	130, 376, 999, 1156
VneI	GTGCAC	1 cut(s)	873
VpaK11BI	GGWCC	2 cut(s)	1283, 1888
VspI	ATTAAT	1 cut(s)	1067
XapI	RAATTY	9 cut(s)	324, 414, 478, 488, 1038, 1212, 1565, 1624, 1773
XbaI	TCTAGA	1 cut(s)	571
XhoI	CTCGAG	1 cut(s)	2173
XmaI	CCCGGG	1 cut(s)	1875
XmiI	GTMKAC	2 cut(s)	822, 2114
XmnI	GAANNNNTTC	1 cut(s)	363
XspI	CTAG	7 cut(s)	120, 305, 572, 902, 933, 1838, 2076
Zsp2I	ATGCAT	1 cut(s)	724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.