Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004950

Physical Location & Seq

Genomic Coordinates Reverse (-)

68256632 .. 68269458

Gene Structure 12827 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00217740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGCTCATCTTGCAACCAACAACACACAGGGTCACTCTTATGATGAGAATAATGATGCCCAGAAAACTGTATTTGATTTGGGTGCATTTGTTGGAGACTTGACTGTTGAGGAGGATGCTAGCAGTGATGACATATCGTTGGAAGGACTGCAACAAGAATTAGAAGAATGTAAACAAGATGACGTAGTTGCAAATATATTGTCTAAGGGTACGAAACTACGGGACTATACAAAGGGGGTTGAGAACAACATACGACAAGTTGAACTAGACTCGATCCAGGATTATATTAAAGAAAGTGATAATCTAGTATCTCTTCATGATCAAATTCGTGATTGTGACAGCATATTGTCACAGATGGAAACTCTTCTCAGTGGATTTCAGGCAGAGATAGGTTCAATAAGTTCTGACATCAAAGTTCTCCAGGAGAAGTCTATGGATATGGGTTTAAAGTTGAAGAATCGCAAGGTGGCAGAGTCAAAATTGGCAAAATTTGTTGAAGACATTATTGTCCCTCCAAGGATGGTAGATATAATTGTTGATGGCGAGGTGAATGATGAATATATGAGAACTCTAGAGATTCTTAGCAAGAAGCTGAAGTTTGTTGAAGTGGATCTTATGGTTAAAACTGCCAAAGCTCTAAAAGATGTTCAGCCTGAGCTTGAAAAACTTAGACAAAAAGCAGTTTCCAAGGTGTTTGACTTCATTGTTCAGAAGCTTTATGCATTGAGAAAACCAAAAACAAATATCCAGATCCTTCAACAGAATGTTCTCTTAAAGTACAAGTATGTTATTTCGTTCCTCAAGGAACACGGAAAGGAGGTATACATTGAGGTTCGTGGAGCATACATCGACACAATGAACAAGGTTCTAAGTGCACATTTCCGTGCTTATATTCAGGCACTTGAGAAACTACAGTTGGATATTGCCACATCTAGTGACTTAATTGGTGTGGAGACGAGAAATACAAGTCTATTTTCAAGAGGAAGGGAACCACTGAAGAACCGGTCGGCTGTTTTTGCTCTTGGAGAGAGGATTAAAATTTTGAAGGAAATTGAAGAACCTGCATTAATTCCACATATAGCTGAAGCTAGCTCTATCAAGTATCCGTATGAGGTGCTCTTCAGGAGCTTGCACAAGCTGCTTATGGACACTGCTACTTCTGAGTACCATTTCTGCGATGATTTCTTTTGCGAAGAATCCATATTTTATGAAATTTTTGCAGGTCCATTTGCTGTAATTGATGAACACTTCAATTCAATACTTCCAAATTGTTATGATGCTATTGGTGTAATGCTTATGATCCGCATTATACACCAGCACCAGCTCATCATGTCTCGGCGGCGTATCCCATGCTTGGATTCATACTTAGACAAGGTCAATATCGCCCTTTGGCCTCGTTTTAAGATGGTGTTTGACCTGCATCTCAACAGCCTGCGCAATGCGAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCACTACGTCATGAGGCGATATGCTGAATTCACAGCTTCACTTATCCACCTCAATGTTGAATATGGAGATGGGCAGCTTGAATTGAATTTGGAAAGACTGAGAATGGCTGTTGATGACTTGCTTATCAAGCTTGCTAAAGCATTTCCAAGACCAAAACTGCAAACTGTGTTTCTGATAAACAACTACGATATGACTATTGCAGTGCTGAAGGAAGCTGGTCCGGAAGGTGGTAAAATTCAAATCCACTTTGAAGAACTGCTGAAAAGCAACACAGCATTATTTGTGGAAGAACTATTACTAGAGCATTTTAGTGATTTAATCAAGTTTGTCAAAACCCGGGCTTCGGAGGACCCGGGTGCTAATGTTGAGAATCCTGTAACTGGCACGGAGGTTGAGCCACTTGTGAAGGACTTTGCAAGTAGATGGAAAGCTGCAATTGAGCTGATGCACAAGGATGTCATAACTTCTTTCAGCAACTTCTTGTGTGGTATGGAAATCTTGAGGGCTGCATTGACTCAGCTACTGCTTTATTATACTAGGCTCTCCGATTGCATAAAGAGGATTGTCGGTGGGTCTACTCTTAACAAGGATCTGGTGTCCATATCCTCAATCATGTATGAAATTAAGAAATACTCGAGGACTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000149 GO:0000902 GO:0000904 GO:0000938 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006892 GO:0006896 GO:0007034 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0016482 GO:0017016 GO:0017137 GO:0019899 GO:0019905 GO:0019953 GO:0022414 GO:0030154 GO:0031090 GO:0031267 GO:0031410 GO:0031982 GO:0031984 GO:0032456 GO:0032501 GO:0032502 GO:0032588 GO:0032989 GO:0032991 GO:0040007 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044706 GO:0046907 GO:0048193 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051020 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0060560 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps52

Protein Analysis

708

Amino Acids

81.02

Weight (kDa)

5.59

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec3_CC	PF09763	77 - 188	1.9e-07	Exocyst complex component Sec3, coiled-coil
Vps52_CC	PF04129	94 - 267	3.6e-66	Vps52/Sac2 family, coiled-coil
Vps52_C	PF20655	284 - 588	3.5e-129	Vps52, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71270 AT1G71300 AT1G71300
fragaria_vesca	FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140
malus_domestica	MD08G1244900.v1.1 MD15G1440000.v1.1
prunus_persica	Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1
pyrus_communis	pycom08g21240 pycom15g38790
rosa_chinensis	RchiOBHm_Chr6g0249411
rosa_laevigata	RLG00000015582
rosa_multiflora	Rmu_sc0000278.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217740
rosa_rugosa	Rorug05G0492100
rosa_samantha	Rh6AG002000 Rh6BG008200 Rh6CG001100 Rh6DG001200
rosa_wichuraiana	Rw6G000250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	506
Acc16I	TGCGCA	1 cut(s)	1436
Acc36I	ACCTGC	3 cut(s)	1069, 1211, 1425
AccI	GTMKAC	2 cut(s)	822, 2054
AccIII	TCCGGA	1 cut(s)	1699
AciI	CCGC	2 cut(s)	1303, 1339
AclWI	GGATC	5 cut(s)	268, 618, 745, 1294, 2076
AcsI	RAATTY	7 cut(s)	324, 488, 1038, 1212, 1505, 1564, 1713
AcuI	CTGAAG	5 cut(s)	614, 1016, 1104, 1105, 1706
AfaI	GTAC	3 cut(s)	211, 779, 1166
AfiI	CCNNNNNNNGG	4 cut(s)	1354, 1706, 1822, 1859
AgeI	ACCGGT	1 cut(s)	1002
AjnI	CCWGG	2 cut(s)	276, 420
AjuI	GAANNNNNNNTTGG	2 cut(s)	899, 931
Alw21I	GWGCWC	2 cut(s)	877, 1119
Alw26I	GTCTC	3 cut(s)	90, 947, 1338
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	5 cut(s)	268, 618, 745, 1294, 2076
AlwNI	CAGNNNCTG	1 cut(s)	2002
Ama87I	CYCGRG	3 cut(s)	1815, 1831, 2113
Aor13HI	TCCGGA	1 cut(s)	1699
AoxI	GGCC	1 cut(s)	1391
ApaLI	GTGCAC	1 cut(s)	873
ApeKI	GCWGC	4 cut(s)	1138, 1552, 1910, 1985
ApoI	RAATTY	7 cut(s)	324, 488, 1038, 1212, 1505, 1564, 1713
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
AseI	ATTAAT	1 cut(s)	1067
AsiGI	ACCGGT	1 cut(s)	1002
Asp700I	GAANNNNTTC	1 cut(s)	363
AspLEI	GCGC	1 cut(s)	1437
AspS9I	GGNCC	3 cut(s)	1223, 1697, 1828
AsuC2I	CCSGG	4 cut(s)	1816, 1817, 1832, 1833
AsuHPI	GGTGA	1 cut(s)	559
AsuNHI	GCTAGC	2 cut(s)	119, 1088
AvaI	CYCGRG	3 cut(s)	1815, 1831, 2113
AvaII	GGWCC	3 cut(s)	1223, 1697, 1828
BaeGI	GKGCMC	1 cut(s)	877
BarI	GAAGNNNNNNTAC	2 cut(s)	1758, 1790
BbsI	GAAGAC	2 cut(s)	504, 1457
Bbv12I	GWGCWC	2 cut(s)	877, 1119
BbvI	GCAGC	4 cut(s)	1125, 1564, 1897, 1972
BccI	CCATC	6 cut(s)	349, 514, 533, 1399, 1541, 1896
BciT130I	CCWGG	2 cut(s)	278, 422
BciVI	GTATCC	2 cut(s)	1113, 1355
BclI	TGATCA	1 cut(s)	319
BcnI	CCSGG	4 cut(s)	1816, 1817, 1832, 1833
BcoDI	GTCTC	3 cut(s)	90, 947, 1338
BfaI	CTAG	8 cut(s)	120, 266, 305, 572, 933, 1089, 1778, 2016
BfmI	CTRYAG	1 cut(s)	911
BfuAI	ACCTGC	3 cut(s)	1069, 1211, 1425
BfuI	GTATCC	2 cut(s)	1113, 1355
BisI	GCNGC	5 cut(s)	1139, 1340, 1553, 1911, 1986
BlsI	GCNGC	5 cut(s)	1140, 1341, 1554, 1912, 1987
Bme1390I	CCNGG	6 cut(s)	278, 422, 1816, 1817, 1832, 1833
Bme18I	GGWCC	3 cut(s)	1223, 1697, 1828
BmeT110I	CYCGRG	3 cut(s)	1815, 1831, 2113
BmgT120I	GGNCC	3 cut(s)	1223, 1697, 1828
BmiI	GGNNCC	2 cut(s)	990, 1830
BmrFI	CCNGG	6 cut(s)	278, 422, 1816, 1817, 1832, 1833
BmsI	GCATC	5 cut(s)	46, 106, 1267, 1429, 1914
BmtI	GCTAGC	2 cut(s)	123, 1092
BpiI	GAAGAC	2 cut(s)	504, 1457
BpmI	CTGGAG	1 cut(s)	404
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	3 cut(s)	785, 923, 1999
BpuMI	CCSGG	4 cut(s)	1816, 1817, 1832, 1833
BsaBI	GATNNNNATC	1 cut(s)	1473
BsaJI	CCNNGG	4 cut(s)	515, 687, 1815, 1831
BsaWI	WCCGGW	2 cut(s)	1002, 1699
Bsc4I	CCNNNNNNNGG	4 cut(s)	1354, 1706, 1822, 1859
Bse118I	RCCGGY	1 cut(s)	1002
Bse1I	ACTGG	1 cut(s)	1864
Bse3DI	GCAATG	1 cut(s)	1444
Bse8I	GATNNNNATC	1 cut(s)	1473
BseAI	TCCGGA	1 cut(s)	1699
BseBI	CCWGG	2 cut(s)	278, 422
BseDI	CCNNGG	4 cut(s)	515, 687, 1815, 1831
BseGI	GGATG	4 cut(s)	121, 525, 1474, 1939
BseJI	GATNNNNATC	1 cut(s)	1473
BseLI	CCNNNNNNNGG	4 cut(s)	1354, 1706, 1822, 1859
BseMI	GCAATG	1 cut(s)	1444
BseMII	CTCAG	5 cut(s)	382, 645, 1152, 1568, 2009
BseNI	ACTGG	1 cut(s)	1864
BseRI	GAGGAG	1 cut(s)	125
BseSI	GKGCMC	1 cut(s)	877
BseXI	GCAGC	4 cut(s)	1125, 1564, 1897, 1972
Bsh1285I	CGRYCG	1 cut(s)	1007
BshFI	GGCC	1 cut(s)	1393
BshTI	ACCGGT	1 cut(s)	1002
BsiEI	CGRYCG	1 cut(s)	1007
BsiHKAI	GWGCWC	2 cut(s)	877, 1119
BsiHKCI	CYCGRG	3 cut(s)	1815, 1831, 2113
BsiSI	CCGG	4 cut(s)	1003, 1700, 1816, 1832
BslFI	GGGAC	2 cut(s)	236, 494
BslI	CCNNNNNNNGG	4 cut(s)	1354, 1706, 1822, 1859
BsmAI	GTCTC	3 cut(s)	90, 947, 1338
BsmBI	CGTCTC	1 cut(s)	947
BsmFI	GGGAC	2 cut(s)	236, 494
BsnI	GGCC	1 cut(s)	1393
BsoBI	CYCGRG	3 cut(s)	1815, 1831, 2113
Bsp1286I	GDGCHC	2 cut(s)	877, 1119
Bsp13I	TCCGGA	1 cut(s)	1699
Bsp143I	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
BspACI	CCGC	2 cut(s)	1303, 1339
BspANI	GGCC	1 cut(s)	1393
BspCNI	CTCAG	5 cut(s)	381, 646, 1153, 1569, 2008
BspEI	TCCGGA	1 cut(s)	1699
BspHI	TCATGA	2 cut(s)	316, 1488
BspLI	GGNNCC	2 cut(s)	990, 1830
BspMI	ACCTGC	3 cut(s)	1069, 1211, 1425
BspOI	GCTAGC	2 cut(s)	123, 1092
BspPI	GGATC	5 cut(s)	268, 618, 745, 1294, 2076
BspQI	GCTCTTC	1 cut(s)	1124
BsrDI	GCAATG	1 cut(s)	1444
BsrFI	RCCGGY	1 cut(s)	1002
BsrI	ACTGG	1 cut(s)	1864
BssAI	RCCGGY	1 cut(s)	1002
BssECI	CCNNGG	4 cut(s)	515, 687, 1815, 1831
BssMI	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
BssNAI	GTATAC	1 cut(s)	823
BssT1I	CCWWGG	2 cut(s)	515, 687
Bst1107I	GTATAC	1 cut(s)	823
Bst2UI	CCWGG	2 cut(s)	278, 422
Bst4CI	ACNGT	4 cut(s)	70, 106, 915, 1645
Bst6I	CTCTTC	3 cut(s)	318, 369, 1124
BstAPI	GCANNNNNTGC	1 cut(s)	1138
BstC8I	GCNNGC	5 cut(s)	121, 1090, 1130, 1433, 1611
BstF5I	GGATG	4 cut(s)	121, 525, 1474, 1939
BstHHI	GCGC	1 cut(s)	1437
BstKTI	GATC	6 cut(s)	276, 322, 613, 753, 1302, 2071
BstMAI	GTCTC	3 cut(s)	90, 947, 1338
BstMBI	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
BstMCI	CGRYCG	1 cut(s)	1007
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1606
BstNI	CCWGG	2 cut(s)	278, 422
BstSCI	CCNGG	6 cut(s)	276, 420, 1814, 1815, 1830, 1831
BstSFI	CTRYAG	1 cut(s)	911
BstSLI	GKGCMC	1 cut(s)	877
BstV1I	GCAGC	4 cut(s)	1125, 1564, 1897, 1972
BstV2I	GAAGAC	2 cut(s)	504, 1457
BstX2I	RGATCY	3 cut(s)	610, 750, 2068
BstYI	RGATCY	3 cut(s)	610, 750, 2068
BstZ17I	GTATAC	1 cut(s)	823
BsuI	GTATCC	2 cut(s)	1113, 1355
BsuRI	GGCC	1 cut(s)	1393
BtgZI	GCGATG	1 cut(s)	1191
BtsCI	GGATG	4 cut(s)	121, 525, 1474, 1939
BtsI	GCAGTG	3 cut(s)	130, 1149, 1686
BtsIMutI	CAGTG	5 cut(s)	130, 376, 992, 1149, 1686
BveI	ACCTGC	3 cut(s)	1069, 1211, 1425
Cac8I	GCNNGC	5 cut(s)	121, 1090, 1130, 1433, 1611
CaiI	CAGNNNCTG	1 cut(s)	2002
CciI	TCATGA	2 cut(s)	316, 1488
CfoI	GCGC	1 cut(s)	1437
Cfr10I	RCCGGY	1 cut(s)	1002
Cfr13I	GGNCC	3 cut(s)	1223, 1697, 1828
Cfr9I	CCCGGG	2 cut(s)	1815, 1831
Csp6I	GTAC	3 cut(s)	210, 778, 1165
CspAI	ACCGGT	1 cut(s)	1002
CviAII	CATG	5 cut(s)	317, 1330, 1350, 1489, 2092
CviQI	GTAC	3 cut(s)	210, 778, 1165
DpnI	GATC	6 cut(s)	275, 321, 612, 752, 1301, 2070
DpnII	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
DraI	TTTAAA	1 cut(s)	447
DrdI	GACNNNNNNGTC	1 cut(s)	506
DseDI	GACNNNNNNGTC	1 cut(s)	506
Eam1104I	CTCTTC	3 cut(s)	318, 369, 1124
EarI	CTCTTC	3 cut(s)	318, 369, 1124
Eco130I	CCWWGG	2 cut(s)	515, 687
Eco47I	GGWCC	3 cut(s)	1223, 1697, 1828
Eco57I	CTGAAG	5 cut(s)	614, 1016, 1104, 1105, 1706
Eco88I	CYCGRG	3 cut(s)	1815, 1831, 2113
EcoO109I	RGGNCCY	1 cut(s)	1828
EcoRI	GAATTC	1 cut(s)	1505
EcoRII	CCWGG	2 cut(s)	276, 420
EcoT14I	CCWWGG	2 cut(s)	515, 687
EcoT22I	ATGCAT	1 cut(s)	724
ErhI	CCWWGG	2 cut(s)	515, 687
Esp3I	CGTCTC	1 cut(s)	947
FaeI	CATG	5 cut(s)	320, 1333, 1353, 1492, 2095
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FaqI	GGGAC	2 cut(s)	236, 494
FatI	CATG	5 cut(s)	316, 1329, 1349, 1488, 2091
FbaI	TGATCA	1 cut(s)	319
FblI	GTMKAC	2 cut(s)	822, 2054
Fnu4HI	GCNGC	5 cut(s)	1139, 1340, 1553, 1911, 1986
FokI	GGATG	4 cut(s)	128, 532, 1461, 1946
Fsp4HI	GCNGC	5 cut(s)	1139, 1340, 1553, 1911, 1986
FspBI	CTAG	8 cut(s)	120, 266, 305, 572, 933, 1089, 1778, 2016
FspI	TGCGCA	1 cut(s)	1436
GlaI	GCGC	1 cut(s)	1436
GluI	GCNGC	5 cut(s)	1139, 1340, 1553, 1911, 1986
GsuI	CTGGAG	1 cut(s)	404
HaeIII	GGCC	1 cut(s)	1393
HapII	CCGG	4 cut(s)	1003, 1700, 1816, 1832
HhaI	GCGC	1 cut(s)	1437
Hin1II	CATG	5 cut(s)	320, 1333, 1353, 1492, 2095
Hin6I	GCGC	1 cut(s)	1435
HinP1I	GCGC	1 cut(s)	1435
HindIII	AAGCTT	2 cut(s)	713, 1607
HinfI	GANTC	8 cut(s)	269, 457, 473, 577, 1196, 1358, 1849, 1993
HpaII	CCGG	4 cut(s)	1003, 1700, 1816, 1832
HphI	GGTGA	1 cut(s)	559
Hpy166II	GTNNAC	4 cut(s)	173, 823, 875, 2055
Hpy188I	TCNGA	6 cut(s)	406, 711, 1162, 1653, 1825, 2026
Hpy188III	TCNNGA	9 cut(s)	317, 329, 572, 748, 978, 1123, 1489, 1700, 1978
Hpy8I	GTNNAC	4 cut(s)	173, 823, 875, 2055
HpyAV	CCTTC	7 cut(s)	137, 764, 978, 1039, 1681, 1697, 1879
HpyCH4III	ACNGT	4 cut(s)	70, 106, 915, 1645
HpyCH4IV	ACGT	2 cut(s)	183, 1485
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1606
HpySE526I	ACGT	2 cut(s)	183, 1485
Hsp92II	CATG	5 cut(s)	320, 1333, 1353, 1492, 2095
HspAI	GCGC	1 cut(s)	1435
Kpn2I	TCCGGA	1 cut(s)	1699
Ksp22I	TGATCA	1 cut(s)	319
Kzo9I	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
LguI	GCTCTTC	1 cut(s)	1124
LmnI	GCTCC	2 cut(s)	839, 1125
Lsp1109I	GCAGC	4 cut(s)	1125, 1564, 1897, 1972
LweI	GCATC	5 cut(s)	46, 106, 1267, 1429, 1914
MaeI	CTAG	8 cut(s)	120, 266, 305, 572, 933, 1089, 1778, 2016
MaeII	ACGT	2 cut(s)	183, 1485
MaeIII	GTNAC	5 cut(s)	32, 335, 348, 935, 1855
MalI	GATC	6 cut(s)	275, 321, 612, 752, 1301, 2070
MboI	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
MfeI	CAATTG	1 cut(s)	1914
MflI	RGATCY	3 cut(s)	610, 750, 2068
MhlI	GDGCHC	2 cut(s)	877, 1119
MlyI	GAGTC	3 cut(s)	263, 482, 1987
MmeI	TCCRAC	3 cut(s)	73, 120, 897
Mph1103I	ATGCAT	1 cut(s)	724
MroI	TCCGGA	1 cut(s)	1699
MroXI	GAANNNNTTC	1 cut(s)	363
MslI	CAYNNNNRTG	5 cut(s)	39, 882, 1530, 1788, 1932
MspI	CCGG	4 cut(s)	1003, 1700, 1816, 1832
MspR9I	CCNGG	6 cut(s)	278, 422, 1816, 1817, 1832, 1833
MunI	CAATTG	1 cut(s)	1914
MvaI	CCWGG	2 cut(s)	278, 422
MwoI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1606
NciI	CCSGG	4 cut(s)	1816, 1817, 1832, 1833
NdeII	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
NheI	GCTAGC	2 cut(s)	119, 1088
NlaIII	CATG	5 cut(s)	320, 1333, 1353, 1492, 2095
NlaIV	GGNNCC	2 cut(s)	990, 1830
NmeAIII	GCCGAG	1 cut(s)	1315
NmuCI	GTSAC	4 cut(s)	32, 335, 348, 935
NsbI	TGCGCA	1 cut(s)	1436
NsiI	ATGCAT	1 cut(s)	724
PaeR7I	CTCGAG	1 cut(s)	2113
PagI	TCATGA	2 cut(s)	316, 1488
PciSI	GCTCTTC	1 cut(s)	1124
PdmI	GAANNNNTTC	1 cut(s)	363
PfeI	GAWTC	5 cut(s)	457, 577, 1196, 1358, 1849
PflFI	GACNNNGTC	1 cut(s)	1373
PfoI	TCCNGGA	2 cut(s)	276, 420
PinAI	ACCGGT	1 cut(s)	1002
PkrI	GCNGC	5 cut(s)	1140, 1341, 1554, 1912, 1987
PleI	GAGTC	3 cut(s)	263, 481, 1987
PpsI	GAGTC	3 cut(s)	263, 481, 1987
PpuMI	RGGWCCY	1 cut(s)	1828
PshBI	ATTAAT	1 cut(s)	1067
Psp5II	RGGWCCY	1 cut(s)	1828
Psp6I	CCWGG	2 cut(s)	276, 420
PspGI	CCWGG	2 cut(s)	276, 420
PspN4I	GGNNCC	2 cut(s)	990, 1830
PspPI	GGNCC	3 cut(s)	1223, 1697, 1828
PspPPI	RGGWCCY	1 cut(s)	1828
PspXI	VCTCGAGB	1 cut(s)	2113
PstNI	CAGNNNCTG	1 cut(s)	2002
PsuI	RGATCY	3 cut(s)	610, 750, 2068
PsyI	GACNNNGTC	1 cut(s)	1373
RsaI	GTAC	3 cut(s)	211, 779, 1166
RsaNI	GTAC	3 cut(s)	210, 778, 1165
RseI	CAYNNNNRTG	5 cut(s)	39, 882, 1530, 1788, 1932
SapI	GCTCTTC	1 cut(s)	1124
SatI	GCNGC	5 cut(s)	1139, 1340, 1553, 1911, 1986
Sau3AI	GATC	6 cut(s)	273, 319, 610, 750, 1299, 2068
Sau96I	GGNCC	3 cut(s)	1223, 1697, 1828
SchI	GAGTC	3 cut(s)	263, 482, 1987
ScrFI	CCNGG	6 cut(s)	278, 422, 1816, 1817, 1832, 1833
SduI	GDGCHC	2 cut(s)	877, 1119
SfaNI	GCATC	5 cut(s)	46, 106, 1267, 1429, 1914
SfcI	CTRYAG	1 cut(s)	911
Sfr274I	CTCGAG	1 cut(s)	2113
SinI	GGWCC	3 cut(s)	1223, 1697, 1828
SlaI	CTCGAG	1 cut(s)	2113
SmaI	CCCGGG	2 cut(s)	1817, 1833
SmiMI	CAYNNNNRTG	5 cut(s)	39, 882, 1530, 1788, 1932
SmlI	CTYRAG	4 cut(s)	800, 902, 1978, 2113
SmoI	CTYRAG	4 cut(s)	800, 902, 1978, 2113
SsiI	CCGC	2 cut(s)	1303, 1339
SspMI	CTAG	8 cut(s)	120, 266, 305, 572, 933, 1089, 1778, 2016
StyD4I	CCNGG	6 cut(s)	276, 420, 1814, 1815, 1830, 1831
StyI	CCWWGG	2 cut(s)	515, 687
TaaI	ACNGT	4 cut(s)	70, 106, 915, 1645
TaiI	ACGT	2 cut(s)	186, 1488
TaqI	TCGA	3 cut(s)	272, 849, 2114
TatI	WGTACW	1 cut(s)	777
TauI	GCSGC	1 cut(s)	1342
TfiI	GAWTC	5 cut(s)	457, 577, 1196, 1358, 1849
TscAI	CASTG	5 cut(s)	130, 376, 999, 1156, 1686
TseFI	GTSAC	4 cut(s)	32, 335, 348, 935
TseI	GCWGC	4 cut(s)	1138, 1552, 1910, 1985
Tsp45I	GTSAC	4 cut(s)	32, 335, 348, 935
TspDTI	ATGAA	9 cut(s)	305, 570, 691, 872, 1224, 1257, 1350, 1463, 2112
TspGWI	ACGGA	4 cut(s)	825, 872, 1095, 1880
TspMI	CCCGGG	2 cut(s)	1815, 1831
TspRI	CASTG	5 cut(s)	130, 376, 999, 1156, 1686
Tth111I	GACNNNGTC	1 cut(s)	1373
VneI	GTGCAC	1 cut(s)	873
VpaK11BI	GGWCC	3 cut(s)	1223, 1697, 1828
VspI	ATTAAT	1 cut(s)	1067
XapI	RAATTY	7 cut(s)	324, 488, 1038, 1212, 1505, 1564, 1713
XbaI	TCTAGA	1 cut(s)	571
XhoI	CTCGAG	1 cut(s)	2113
XmaI	CCCGGG	2 cut(s)	1815, 1831
XmiI	GTMKAC	2 cut(s)	822, 2054
XmnI	GAANNNNTTC	1 cut(s)	363
XspI	CTAG	8 cut(s)	120, 266, 305, 572, 933, 1089, 1778, 2016
Zsp2I	ATGCAT	1 cut(s)	724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.