Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000278.1

Orthogroup ID

OG0004950

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 18603

Gene Structure 18603 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000278.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2567 bp

atggacaagtttgtgagtaagaagagcatgacggtgcttgtgaagaggtttggtaagaagatccgctggcttatcaatggatggtataaagcaaacacgatgactaccaagagccaccttctcatgaacatagtgataatcaagttcaatatgcttagtgcgggcatggaatactggattagaagccatattcaggcaacgattgaagcagagagagcctgcagtgagcaatcacacatatttttagatggtggcggagctggatctgctaaccacctgcacctgttaatccacatggctcatcttgcaaccaacaacacacagggtcactcttatgatgagaataatgatgcccagaaaactgtatttgatttgggtgcatttgttggagacttgactgttgaggaggatgctagcagtgatgacatatcgttggaaggactgcaacaagaattagaagaatgtaaacaagatgacgtagttgcaaatatattgtctaagggtacgaaactacgggactatacaaagggggttgagaacaacatacggcaagttgaactagactcgatccaggattatattaaagaaagtgataatctagtatctcttcatgatcaaattcgtgattgtgacagcatattgtcacagatggaaactcttctcagtggatttcaggcagagataggttcaataagttctgacatcaaagttctccaggagaagtctatggatatgggtttaaagttgaagaatcgcaaggtggcagagtcaaaattggcaaaatttgttgaagacattatagtccctccaaggatggtagatataattgttgatggcgaggtgaatgatgaatatatgagaactctagagattcttagcaagaagctgaagtttgttgaagtggatcttatggttaaaactgccaaagctctaaaagatgttcagcctgagcttgaaaaacttagacaaaaagcagtttccaaggtgtttgacttcattgttcagaagctttatgcattgagaaaaccaaaaaccaatatccagatccttcaacagaatgttctcttaaagtacaagtatgttattttgttcctcaaggaacacggaaaggaggtatacattgaggttcgtggagcatacatcgacacaatgaacaaggttctaagtgcacatttccgtgcttatattcaggcacttgagaaactgcagttggatattgccacatctagtgacttaattggtgtggagacgagaaatacaagtctattttcaagaggaagggaaccactgaagaaccggtcggctgtttttgctcttggagagaggattaaaattttgaaggaaattgaagaacctgcattaattccacatatagctgaagccagctctatcaagtatccgtatgaggtgctcttcaggagtttgcacaagctgcttatggacactgctacttctgagtaccatttctgcgatgatttcttttgcgaagaatccatattttatgaaatttttgcaggtccatttgctgtaattgatgaacacttcaattcaatacttccaaattgttatgatgctattggtgtaatgcttatgatccgcattatacaccagcaccagctcatcatgtctcggcggcgtatcccatgcttggattcatacttagacaaggtcaatatcgccctttggcctcgttttaagatggtgtttgacctgcatctcaacagcctgcgcaatgcgaatgtgaagacattgtgggaagatgatgttcatcctcactacgtcatgaggcgatatgctgaattcacagcttcacttatccacctcaatgttgaatatggagatgggcagcttgaattgaatttggaaagactgagaatggctgttgatgacttgcttatcaagcttgctaaagcatttccaagaccaaaactgcaaactgtgtttctgataaacaactacgatatgactattgcagtgctgaaggaagctggtccggaaggtggtaaaattcaaatccactttgaggaactgctgaaaagcaacacagcattatttgtggaagaactattactagagcattttagtgatttaatcaagtttgtcaaaacccgggcttcggaggacccgggtgctaatgttgagaatcctgtaactggcacggaggttgagccacttgtgaaggactttgcaagtagatggaaagctgcaattgagctgatgcacaaggatgtcataacttctttcagcaacttcttgtgtggtatggaaatcttgagggctgcattgactcagctactgctttattatactaggctctccgattgcataaagaggattgtcggtgggtctactcttaacaaggatctgcagaaggagttctttgcagctgatgaagatatggtggctgttaggaattttaggggttggaagaaatcgggtaacgctagcaccggtgcagacatcagtgccaatttgagagcttcgaacgccaattttgatagtattgaccacctgaagttgtcgttcttaagaagatcagtgagagactttgctataatgtcgtacag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000149 GO:0000902 GO:0000904 GO:0000938 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006892 GO:0006896 GO:0007034 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0016482 GO:0017016 GO:0017137 GO:0019899 GO:0019905 GO:0019953 GO:0022414 GO:0030154 GO:0031090 GO:0031267 GO:0031410 GO:0031982 GO:0031984 GO:0032456 GO:0032501 GO:0032502 GO:0032588 GO:0032989 GO:0032991 GO:0040007 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044706 GO:0046907 GO:0048193 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051020 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0060560 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps52

Protein Analysis

855

Amino Acids

97.63

Weight (kDa)

6.18

Isoelectric Point (pI)

41.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71270 AT1G71300 AT1G71300
fragaria_vesca	FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140
malus_domestica	MD08G1244900.v1.1 MD15G1440000.v1.1
prunus_persica	Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1
pyrus_communis	pycom08g21240 pycom15g38790
rosa_chinensis	RchiOBHm_Chr6g0249411
rosa_laevigata	RLG00000015582
rosa_multiflora	Rmu_sc0000278.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217740
rosa_rugosa	Rorug05G0492100
rosa_samantha	Rh6AG002000 Rh6BG008200 Rh6CG001100 Rh6DG001200
rosa_wichuraiana	Rw6G000250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	285
AasI	GACNNNNNNGTC	1 cut(s)	800
Acc16I	TGCGCA	1 cut(s)	1730
Acc36I	ACCTGC	4 cut(s)	285, 1363, 1505, 1719
AccI	GTMKAC	2 cut(s)	1116, 2348
AccIII	TCCGGA	1 cut(s)	1993
AciI	CCGC	5 cut(s)	64, 161, 255, 1597, 1633
AclWI	GGATC	7 cut(s)	55, 271, 562, 912, 1039, 1588, 2370
AcsI	RAATTY	8 cut(s)	618, 782, 1332, 1506, 1799, 1858, 2007, 2413
AcuI	CTGAAG	6 cut(s)	908, 1310, 1398, 1399, 2000, 2534
AfaI	GTAC	4 cut(s)	505, 1073, 1460, 2564
AfiI	CCNNNNNNNGG	6 cut(s)	193, 1648, 2000, 2023, 2116, 2153
AflII	CTTAAG	1 cut(s)	2527
AgeI	ACCGGT	2 cut(s)	1296, 2450
AjnI	CCWGG	2 cut(s)	570, 714
AjuI	GAANNNNNNNTTGG	2 cut(s)	1193, 1225
Alw21I	GWGCWC	2 cut(s)	1171, 1413
Alw26I	GTCTC	4 cut(s)	384, 1241, 1632, 2538
Alw44I	GTGCAC	1 cut(s)	1167
AlwI	GGATC	7 cut(s)	55, 271, 562, 912, 1039, 1588, 2370
AlwNI	CAGNNNCTG	1 cut(s)	2296
Ama87I	CYCGRG	2 cut(s)	2109, 2125
Aor13HI	TCCGGA	1 cut(s)	1993
AoxI	GGCC	1 cut(s)	1685
ApaLI	GTGCAC	1 cut(s)	1167
ApeKI	GCWGC	5 cut(s)	1432, 1846, 2204, 2279, 2384
ApoI	RAATTY	8 cut(s)	618, 782, 1332, 1506, 1799, 1858, 2007, 2413
ArsI	GACNNNNNNTTYG	2 cut(s)	479, 511
AseI	ATTAAT	1 cut(s)	1361
AsiGI	ACCGGT	2 cut(s)	1296, 2450
Asp700I	GAANNNNTTC	2 cut(s)	657, 2375
AspLEI	GCGC	1 cut(s)	1731
AspS9I	GGNCC	3 cut(s)	1517, 1991, 2122
AsuC2I	CCSGG	4 cut(s)	2110, 2111, 2126, 2127
AsuHPI	GGTGA	1 cut(s)	853
AsuII	TTCGAA	1 cut(s)	2483
AsuNHI	GCTAGC	2 cut(s)	413, 2444
AvaI	CYCGRG	2 cut(s)	2109, 2125
AvaII	GGWCC	3 cut(s)	1517, 1991, 2122
BaeGI	GKGCMC	1 cut(s)	1171
BarI	GAAGNNNNNNTAC	2 cut(s)	2052, 2084
BbsI	GAAGAC	2 cut(s)	798, 1751
Bbv12I	GWGCWC	2 cut(s)	1171, 1413
BbvI	GCAGC	5 cut(s)	1419, 1858, 2191, 2266, 2396
BccI	CCATC	8 cut(s)	75, 242, 643, 808, 827, 1693, 1835, 2190
BceAI	ACGGC	1 cut(s)	563
BciT130I	CCWGG	2 cut(s)	572, 716
BciVI	GTATCC	2 cut(s)	1407, 1649
BclI	TGATCA	1 cut(s)	613
BcnI	CCSGG	4 cut(s)	2110, 2111, 2126, 2127
BcoDI	GTCTC	4 cut(s)	384, 1241, 1632, 2538
BfaI	CTAG	8 cut(s)	414, 560, 599, 866, 1227, 2072, 2310, 2445
BfmI	CTRYAG	3 cut(s)	220, 1205, 2366
BfrI	CTTAAG	1 cut(s)	2527
BfuAI	ACCTGC	4 cut(s)	285, 1363, 1505, 1719
BfuI	GTATCC	2 cut(s)	1407, 1649
BisI	GCNGC	6 cut(s)	1433, 1634, 1847, 2205, 2280, 2385
BlsI	GCNGC	6 cut(s)	1434, 1635, 1848, 2206, 2281, 2386
Bme1390I	CCNGG	6 cut(s)	572, 716, 2110, 2111, 2126, 2127
Bme18I	GGWCC	3 cut(s)	1517, 1991, 2122
BmeT110I	CYCGRG	2 cut(s)	2109, 2125
BmgT120I	GGNCC	3 cut(s)	1517, 1991, 2122
BmiI	GGNNCC	2 cut(s)	1284, 2124
BmrFI	CCNGG	6 cut(s)	572, 716, 2110, 2111, 2126, 2127
BmsI	GCATC	5 cut(s)	340, 400, 1561, 1723, 2208
BmtI	GCTAGC	2 cut(s)	417, 2448
BpiI	GAAGAC	2 cut(s)	798, 1751
BpmI	CTGGAG	1 cut(s)	698
Bpu10I	CCTNAGC	1 cut(s)	948
Bpu14I	TTCGAA	1 cut(s)	2483
BpuEI	CTTGAG	3 cut(s)	1079, 1217, 2293
BpuMI	CCSGG	4 cut(s)	2110, 2111, 2126, 2127
BsaBI	GATNNNNATC	1 cut(s)	1767
BsaJI	CCNNGG	4 cut(s)	809, 981, 2109, 2125
BsaWI	WCCGGW	3 cut(s)	1296, 1993, 2450
Bsc4I	CCNNNNNNNGG	6 cut(s)	193, 1648, 2000, 2023, 2116, 2153
Bse118I	RCCGGY	2 cut(s)	1296, 2450
Bse1I	ACTGG	2 cut(s)	179, 2158
Bse3DI	GCAATG	1 cut(s)	1738
Bse8I	GATNNNNATC	1 cut(s)	1767
BseAI	TCCGGA	1 cut(s)	1993
BseBI	CCWGG	2 cut(s)	572, 716
BseDI	CCNNGG	4 cut(s)	809, 981, 2109, 2125
BseGI	GGATG	5 cut(s)	86, 415, 819, 1768, 2233
BseJI	GATNNNNATC	1 cut(s)	1767
BseLI	CCNNNNNNNGG	6 cut(s)	193, 1648, 2000, 2023, 2116, 2153
BseMI	GCAATG	1 cut(s)	1738
BseMII	CTCAG	5 cut(s)	676, 939, 1446, 1862, 2303
BseNI	ACTGG	2 cut(s)	179, 2158
BseRI	GAGGAG	1 cut(s)	419
BseSI	GKGCMC	1 cut(s)	1171
BseXI	GCAGC	5 cut(s)	1419, 1858, 2191, 2266, 2396
BsgI	GTGCAG	2 cut(s)	263, 2475
Bsh1285I	CGRYCG	1 cut(s)	1301
BshFI	GGCC	1 cut(s)	1687
BshTI	ACCGGT	2 cut(s)	1296, 2450
BsiEI	CGRYCG	1 cut(s)	1301
BsiHKAI	GWGCWC	2 cut(s)	1171, 1413
BsiHKCI	CYCGRG	2 cut(s)	2109, 2125
BsiSI	CCGG	5 cut(s)	1297, 1994, 2110, 2126, 2451
BslFI	GGGAC	2 cut(s)	530, 788
BslI	CCNNNNNNNGG	6 cut(s)	193, 1648, 2000, 2023, 2116, 2153
BsmAI	GTCTC	4 cut(s)	384, 1241, 1632, 2538
BsmBI	CGTCTC	1 cut(s)	1241
BsmFI	GGGAC	2 cut(s)	530, 788
BsnI	GGCC	1 cut(s)	1687
BsoBI	CYCGRG	2 cut(s)	2109, 2125
Bsp119I	TTCGAA	1 cut(s)	2483
Bsp1286I	GDGCHC	2 cut(s)	1171, 1413
Bsp13I	TCCGGA	1 cut(s)	1993
Bsp143I	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
BspACI	CCGC	5 cut(s)	64, 161, 255, 1597, 1633
BspANI	GGCC	1 cut(s)	1687
BspCNI	CTCAG	5 cut(s)	675, 940, 1447, 1863, 2302
BspEI	TCCGGA	1 cut(s)	1993
BspHI	TCATGA	3 cut(s)	123, 610, 1782
BspLI	GGNNCC	2 cut(s)	1284, 2124
BspMAI	CTGCAG	3 cut(s)	224, 1209, 2370
BspMI	ACCTGC	4 cut(s)	285, 1363, 1505, 1719
BspOI	GCTAGC	2 cut(s)	417, 2448
BspPI	GGATC	7 cut(s)	55, 271, 562, 912, 1039, 1588, 2370
BspQI	GCTCTTC	2 cut(s)	17, 1418
BspT104I	TTCGAA	1 cut(s)	2483
BspTI	CTTAAG	1 cut(s)	2527
BsrDI	GCAATG	1 cut(s)	1738
BsrFI	RCCGGY	2 cut(s)	1296, 2450
BsrI	ACTGG	2 cut(s)	179, 2158
BssAI	RCCGGY	2 cut(s)	1296, 2450
BssECI	CCNNGG	4 cut(s)	809, 981, 2109, 2125
BssMI	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
BssNAI	GTATAC	1 cut(s)	1117
BssT1I	CCWWGG	2 cut(s)	809, 981
Bst1107I	GTATAC	1 cut(s)	1117
Bst2UI	CCWGG	2 cut(s)	572, 716
Bst4CI	ACNGT	4 cut(s)	34, 364, 400, 1939
Bst6I	CTCTTC	5 cut(s)	17, 38, 612, 663, 1418
BstAFI	CTTAAG	1 cut(s)	2527
BstAPI	GCANNNNNTGC	1 cut(s)	1432
BstBI	TTCGAA	1 cut(s)	2483
BstC8I	GCNNGC	8 cut(s)	68, 163, 220, 415, 1384, 1727, 1905, 2446
BstF5I	GGATG	5 cut(s)	86, 415, 819, 1768, 2233
BstHHI	GCGC	1 cut(s)	1731
BstKTI	GATC	9 cut(s)	63, 266, 570, 616, 907, 1047, 1596, 2365, 2537
BstMAI	GTCTC	4 cut(s)	384, 1241, 1632, 2538
BstMBI	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
BstMCI	CGRYCG	1 cut(s)	1301
BstMWI	GCNNNNNNNGC	7 cut(s)	215, 266, 305, 1310, 1432, 1900, 2486
BstNI	CCWGG	2 cut(s)	572, 716
BstSCI	CCNGG	6 cut(s)	570, 714, 2108, 2109, 2124, 2125
BstSFI	CTRYAG	3 cut(s)	220, 1205, 2366
BstSLI	GKGCMC	1 cut(s)	1171
BstV1I	GCAGC	5 cut(s)	1419, 1858, 2191, 2266, 2396
BstV2I	GAAGAC	2 cut(s)	798, 1751
BstX2I	RGATCY	5 cut(s)	60, 263, 904, 1044, 2362
BstYI	RGATCY	5 cut(s)	60, 263, 904, 1044, 2362
BstZ17I	GTATAC	1 cut(s)	1117
BsuI	GTATCC	2 cut(s)	1407, 1649
BsuRI	GGCC	1 cut(s)	1687
BtgZI	GCGATG	1 cut(s)	1485
BtsCI	GGATG	5 cut(s)	86, 415, 819, 1768, 2233
BtsI	GCAGTG	4 cut(s)	229, 424, 1443, 1980
BtsIMutI	CAGTG	8 cut(s)	229, 424, 670, 1286, 1443, 1980, 2470, 2544
BveI	ACCTGC	4 cut(s)	285, 1363, 1505, 1719
Cac8I	GCNNGC	8 cut(s)	68, 163, 220, 415, 1384, 1727, 1905, 2446
CaiI	CAGNNNCTG	1 cut(s)	2296
CciI	TCATGA	3 cut(s)	123, 610, 1782
CfoI	GCGC	1 cut(s)	1731
Cfr10I	RCCGGY	2 cut(s)	1296, 2450
Cfr13I	GGNCC	3 cut(s)	1517, 1991, 2122
Cfr9I	CCCGGG	2 cut(s)	2109, 2125
Csp6I	GTAC	4 cut(s)	504, 1072, 1459, 2563
CspAI	ACCGGT	2 cut(s)	1296, 2450
CviAII	CATG	8 cut(s)	28, 124, 166, 295, 611, 1624, 1644, 1783
CviQI	GTAC	4 cut(s)	504, 1072, 1459, 2563
DpnI	GATC	9 cut(s)	62, 265, 569, 615, 906, 1046, 1595, 2364, 2536
DpnII	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
DraI	TTTAAA	1 cut(s)	741
DrdI	GACNNNNNNGTC	1 cut(s)	800
DseDI	GACNNNNNNGTC	1 cut(s)	800
Eam1104I	CTCTTC	5 cut(s)	17, 38, 612, 663, 1418
EarI	CTCTTC	5 cut(s)	17, 38, 612, 663, 1418
EciI	GGCGGA	1 cut(s)	270
Eco130I	CCWWGG	2 cut(s)	809, 981
Eco47I	GGWCC	3 cut(s)	1517, 1991, 2122
Eco57I	CTGAAG	6 cut(s)	908, 1310, 1398, 1399, 2000, 2534
Eco88I	CYCGRG	2 cut(s)	2109, 2125
EcoO109I	RGGNCCY	1 cut(s)	2122
EcoRI	GAATTC	1 cut(s)	1799
EcoRII	CCWGG	2 cut(s)	570, 714
EcoT14I	CCWWGG	2 cut(s)	809, 981
EcoT22I	ATGCAT	1 cut(s)	1018
ErhI	CCWWGG	2 cut(s)	809, 981
Esp3I	CGTCTC	1 cut(s)	1241
FaeI	CATG	8 cut(s)	31, 127, 169, 298, 614, 1627, 1647, 1786
FalI	AAGNNNNNCTT	4 cut(s)	891, 923, 2363, 2395
FaqI	GGGAC	2 cut(s)	530, 788
FatI	CATG	8 cut(s)	27, 123, 165, 294, 610, 1623, 1643, 1782
FauI	CCCGC	1 cut(s)	154
FbaI	TGATCA	1 cut(s)	613
FblI	GTMKAC	2 cut(s)	1116, 2348
Fnu4HI	GCNGC	6 cut(s)	1433, 1634, 1847, 2205, 2280, 2385
FokI	GGATG	5 cut(s)	93, 422, 826, 1755, 2240
Fsp4HI	GCNGC	6 cut(s)	1433, 1634, 1847, 2205, 2280, 2385
FspBI	CTAG	8 cut(s)	414, 560, 599, 866, 1227, 2072, 2310, 2445
FspI	TGCGCA	1 cut(s)	1730
GlaI	GCGC	1 cut(s)	1730
GluI	GCNGC	6 cut(s)	1433, 1634, 1847, 2205, 2280, 2385
GsuI	CTGGAG	1 cut(s)	698
HaeIII	GGCC	1 cut(s)	1687
HapII	CCGG	5 cut(s)	1297, 1994, 2110, 2126, 2451
HhaI	GCGC	1 cut(s)	1731
Hin1II	CATG	8 cut(s)	31, 127, 169, 298, 614, 1627, 1647, 1786
Hin6I	GCGC	1 cut(s)	1729
HinP1I	GCGC	1 cut(s)	1729
HindIII	AAGCTT	2 cut(s)	1007, 1901
HinfI	GANTC	8 cut(s)	563, 751, 767, 871, 1490, 1652, 2143, 2287
HpaII	CCGG	5 cut(s)	1297, 1994, 2110, 2126, 2451
HphI	GGTGA	1 cut(s)	853
Hpy166II	GTNNAC	4 cut(s)	467, 1117, 1169, 2349
Hpy188I	TCNGA	6 cut(s)	700, 1005, 1456, 1947, 2119, 2320
Hpy8I	GTNNAC	4 cut(s)	467, 1117, 1169, 2349
HpyAV	CCTTC	9 cut(s)	128, 431, 1058, 1272, 1333, 1975, 1991, 2173, 2365
HpyCH4III	ACNGT	4 cut(s)	34, 364, 400, 1939
HpyCH4IV	ACGT	2 cut(s)	477, 1779
HpyF10VI	GCNNNNNNNGC	7 cut(s)	215, 266, 305, 1310, 1432, 1900, 2486
HpySE526I	ACGT	2 cut(s)	477, 1779
Hsp92II	CATG	8 cut(s)	31, 127, 169, 298, 614, 1627, 1647, 1786
HspAI	GCGC	1 cut(s)	1729
Kpn2I	TCCGGA	1 cut(s)	1993
Ksp22I	TGATCA	1 cut(s)	613
Kzo9I	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
LguI	GCTCTTC	2 cut(s)	17, 1418
LmnI	GCTCC	2 cut(s)	257, 1133
Lsp1109I	GCAGC	5 cut(s)	1419, 1858, 2191, 2266, 2396
LweI	GCATC	5 cut(s)	340, 400, 1561, 1723, 2208
MaeI	CTAG	8 cut(s)	414, 560, 599, 866, 1227, 2072, 2310, 2445
MaeII	ACGT	2 cut(s)	477, 1779
MaeIII	GTNAC	6 cut(s)	326, 629, 642, 1229, 2149, 2438
MalI	GATC	9 cut(s)	62, 265, 569, 615, 906, 1046, 1595, 2364, 2536
MboI	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
MfeI	CAATTG	1 cut(s)	2208
MflI	RGATCY	5 cut(s)	60, 263, 904, 1044, 2362
MhlI	GDGCHC	2 cut(s)	1171, 1413
MlyI	GAGTC	3 cut(s)	557, 776, 2281
MmeI	TCCRAC	4 cut(s)	367, 414, 1191, 2405
Mph1103I	ATGCAT	1 cut(s)	1018
MroI	TCCGGA	1 cut(s)	1993
MroXI	GAANNNNTTC	2 cut(s)	657, 2375
MslI	CAYNNNNRTG	6 cut(s)	32, 333, 1176, 1824, 2082, 2226
MspA1I	CMGCKG	2 cut(s)	66, 2387
MspCI	CTTAAG	1 cut(s)	2527
MspI	CCGG	5 cut(s)	1297, 1994, 2110, 2126, 2451
MspR9I	CCNGG	6 cut(s)	572, 716, 2110, 2111, 2126, 2127
MunI	CAATTG	1 cut(s)	2208
MvaI	CCWGG	2 cut(s)	572, 716
MwoI	GCNNNNNNNGC	7 cut(s)	215, 266, 305, 1310, 1432, 1900, 2486
NciI	CCSGG	4 cut(s)	2110, 2111, 2126, 2127
NdeII	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
NheI	GCTAGC	2 cut(s)	413, 2444
NlaIII	CATG	8 cut(s)	31, 127, 169, 298, 614, 1627, 1647, 1786
NlaIV	GGNNCC	2 cut(s)	1284, 2124
NmeAIII	GCCGAG	1 cut(s)	1609
NmuCI	GTSAC	4 cut(s)	326, 629, 642, 1229
NsbI	TGCGCA	1 cut(s)	1730
NsiI	ATGCAT	1 cut(s)	1018
NspV	TTCGAA	1 cut(s)	2483
PagI	TCATGA	3 cut(s)	123, 610, 1782
PaqCI	CACCTGC	1 cut(s)	285
PciSI	GCTCTTC	2 cut(s)	17, 1418
PdmI	GAANNNNTTC	2 cut(s)	657, 2375
PfeI	GAWTC	5 cut(s)	751, 871, 1490, 1652, 2143
PflFI	GACNNNGTC	1 cut(s)	1667
PfoI	TCCNGGA	2 cut(s)	570, 714
PinAI	ACCGGT	2 cut(s)	1296, 2450
PkrI	GCNGC	6 cut(s)	1434, 1635, 1848, 2206, 2281, 2386
PleI	GAGTC	3 cut(s)	557, 775, 2281
PpsI	GAGTC	3 cut(s)	557, 775, 2281
PpuMI	RGGWCCY	1 cut(s)	2122
PshBI	ATTAAT	1 cut(s)	1361
Psp5II	RGGWCCY	1 cut(s)	2122
Psp6I	CCWGG	2 cut(s)	570, 714
PspGI	CCWGG	2 cut(s)	570, 714
PspN4I	GGNNCC	2 cut(s)	1284, 2124
PspPI	GGNCC	3 cut(s)	1517, 1991, 2122
PspPPI	RGGWCCY	1 cut(s)	2122
PstI	CTGCAG	3 cut(s)	224, 1209, 2370
PstNI	CAGNNNCTG	1 cut(s)	2296
PsuI	RGATCY	5 cut(s)	60, 263, 904, 1044, 2362
PsyI	GACNNNGTC	1 cut(s)	1667
PvuII	CAGCTG	1 cut(s)	2387
RsaI	GTAC	4 cut(s)	505, 1073, 1460, 2564
RsaNI	GTAC	4 cut(s)	504, 1072, 1459, 2563
RseI	CAYNNNNRTG	6 cut(s)	32, 333, 1176, 1824, 2082, 2226
SapI	GCTCTTC	2 cut(s)	17, 1418
SatI	GCNGC	6 cut(s)	1433, 1634, 1847, 2205, 2280, 2385
Sau3AI	GATC	9 cut(s)	60, 263, 567, 613, 904, 1044, 1593, 2362, 2534
Sau96I	GGNCC	3 cut(s)	1517, 1991, 2122
SchI	GAGTC	3 cut(s)	557, 776, 2281
ScrFI	CCNGG	6 cut(s)	572, 716, 2110, 2111, 2126, 2127
SduI	GDGCHC	2 cut(s)	1171, 1413
SfaNI	GCATC	5 cut(s)	340, 400, 1561, 1723, 2208
SfcI	CTRYAG	3 cut(s)	220, 1205, 2366
SfuI	TTCGAA	1 cut(s)	2483
SgrAI	CRCCGGYG	1 cut(s)	2450
SinI	GGWCC	3 cut(s)	1517, 1991, 2122
SmaI	CCCGGG	2 cut(s)	2111, 2127
SmiMI	CAYNNNNRTG	6 cut(s)	32, 333, 1176, 1824, 2082, 2226
SmlI	CTYRAG	4 cut(s)	1094, 1196, 2272, 2527
SmoI	CTYRAG	4 cut(s)	1094, 1196, 2272, 2527
SsiI	CCGC	5 cut(s)	64, 161, 255, 1597, 1633
SspMI	CTAG	8 cut(s)	414, 560, 599, 866, 1227, 2072, 2310, 2445
StyD4I	CCNGG	6 cut(s)	570, 714, 2108, 2109, 2124, 2125
StyI	CCWWGG	2 cut(s)	809, 981
TaaI	ACNGT	4 cut(s)	34, 364, 400, 1939
TaiI	ACGT	2 cut(s)	480, 1782
TaqI	TCGA	3 cut(s)	566, 1143, 2483
TatI	WGTACW	1 cut(s)	1071
TauI	GCSGC	1 cut(s)	1636
TfiI	GAWTC	5 cut(s)	751, 871, 1490, 1652, 2143
TscAI	CASTG	8 cut(s)	229, 424, 670, 1293, 1450, 1980, 2470, 2544
TseFI	GTSAC	4 cut(s)	326, 629, 642, 1229
TseI	GCWGC	5 cut(s)	1432, 1846, 2204, 2279, 2384
Tsp45I	GTSAC	4 cut(s)	326, 629, 642, 1229
TspGWI	ACGGA	4 cut(s)	1119, 1166, 1389, 2174
TspMI	CCCGGG	2 cut(s)	2109, 2125
TspRI	CASTG	8 cut(s)	229, 424, 670, 1293, 1450, 1980, 2470, 2544
Tth111I	GACNNNGTC	1 cut(s)	1667
Vha464I	CTTAAG	1 cut(s)	2527
VneI	GTGCAC	1 cut(s)	1167
VpaK11BI	GGWCC	3 cut(s)	1517, 1991, 2122
VspI	ATTAAT	1 cut(s)	1361
XapI	RAATTY	8 cut(s)	618, 782, 1332, 1506, 1799, 1858, 2007, 2413
XbaI	TCTAGA	1 cut(s)	865
XmaI	CCCGGG	2 cut(s)	2109, 2125
XmiI	GTMKAC	2 cut(s)	1116, 2348
XmnI	GAANNNNTTC	2 cut(s)	657, 2375
XspI	CTAG	8 cut(s)	414, 560, 599, 866, 1227, 2072, 2310, 2445
Zsp2I	ATGCAT	1 cut(s)	1018

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.