Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004950

Physical Location & Seq

Genomic Coordinates Forward (+)

159427 .. 172111

Gene Structure 12685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG001200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGCTCATCTTGCAACCAACAACACACAGGGTCACTCTTATGATGAGAATAATGATGCCCAGAAAACTGTATTTGATTTGGGTGCATTTGTTGGAGACTTGACTGTTGAGGAGGATGCTAGCAGTGATGACATATCGTTGGAAGGACTGCAACAAGAATTAGAAGAATGTAAACAAGATGACGTAGTTGCAAATATATTGTCTAAGGGTACGAAACTACGGGACTATACAAAGGGGGTTGAGAACAACATACGACAAGTTGAACTAGACTCGATCCAGGATTATATTAAAGAAAGTGATAATCTAGTATCTCTTCATGATCAAATTCGTGATTGTGACAGCATATTGTCACAGATGGAAACTCTTCTCAGTGGATTTCAGGCAGAGATAGGCTCAATAAGTTCTGACATCAAAGTTCTCCAGGAGAAGTCTATGGATATGGGTTTAAAGTTGAAGAATCGCAAGGTGGCAGAGTCAAAATTGGCAAAATTTGTTGAAGACATTATAGTCCCTCCAAGGATGGTAGATATAATTGTTGATGGCGAGGTGAATGATGAATATATGAGAACTCTAGAGATTCTTAGCAAGAAGCTGAAGTTTGTTGAAGTGGATCTTATGGTTAAAACTGCCAAAGCTCTAAAAGATGTTCAGCCTGAGCTTGAAAAACTTAGACAAAAAGCAGTTTCCAAGGTGTTTGACTTCATTGTTCAGAAGCTTTATGCATTGAGAAAACCAAAAACAAATATCCAGATCCTTCAACAGAATGTTCTCTTAAAGTACAAGTATGTTATTTCGTTCCTCAAGGAACACGGAAAGGAGGTATACATTGAGGTTCGTGGAGCATACATCGACACAATGAACAAGGTTCTAAGTGCACATTTCCGTGCTTATATTCAGGCACTTGAGAAACTACAGTTGGATATTGCCACATCTAGTGACTTAATTGGTGTGGAGACGAGAAATACAAGTCTATTTTCAAGAGGAAGGGAACCACTGAAGAACCGGTCGGCTGTTTTTGCTCTTGGAGAGAGGATTAAAATTTTGAAGGAATTTGAAGAACCTGCATTAATTCCACATATAGCTGAAGCCAGCTCTATCAAGTATCCGTATGAGGTGCTCTTCAGGAGCTTGCACAAGCTGCTTATGGACACTGCTACTTCTGAGTACCATTTCTGCGATGATTTCTTTTGCGAAGAATCCATATTTTATGAAATTTTTGCAGGTCCATTTGCTGTAATTGATGAACACTTCAATTCAATACTTCCAAATTGTTATGATGCTATTGGTGTAATGCTTATGATCCGCATTATACACCAGCACCAGCTCATCATGTCTCGGCGGCGTATCCCATGCTTGGATTCATACTTAGACAAGGTCAATATCGCCCTTTGGCCTCGTTTTAAGATGGTGTTTGACCTGCATCTCAACAGCCTGCGCAATGCGAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCACTACGTCATGAGGCGATATGCTGAATTCACAGCTTCACTTATCCACCTCAATGTTGAATATGGAGATGGGCAGCTTGAATTGAATTTGGAAAGACTGAGAATGGCTGTTGATGACTTGCTTATCAAGCTTGCTAAAGCATTTCCAAGACCAAAACTGCAAACTGTGTTTCTGATAAACAACTACGATATGACTATTGCAGTGCTGAAGGTAATTTCTTGTTTCTTATTTCCTTTTTTTATTGTTGAAAAACAGCCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000149 GO:0000902 GO:0000904 GO:0000938 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006892 GO:0006896 GO:0007034 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0016482 GO:0017016 GO:0017137 GO:0019899 GO:0019905 GO:0019953 GO:0022414 GO:0030154 GO:0031090 GO:0031267 GO:0031410 GO:0031982 GO:0031984 GO:0032456 GO:0032501 GO:0032502 GO:0032588 GO:0032989 GO:0032991 GO:0040007 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044706 GO:0046907 GO:0048193 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051020 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0060560 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps52

Protein Analysis

580

Amino Acids

66.77

Weight (kDa)

5.64

Isoelectric Point (pI)

40.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec3_CC	PF09763	77 - 188	1.4e-07	Exocyst complex component Sec3, coiled-coil
Vps52_CC	PF04129	94 - 267	2.5e-66	Vps52/Sac2 family, coiled-coil
Vps52_C	PF20655	284 - 563	8.9e-122	Vps52, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71270 AT1G71300 AT1G71300
fragaria_vesca	FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140
malus_domestica	MD08G1244900.v1.1 MD15G1440000.v1.1
prunus_persica	Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1
pyrus_communis	pycom08g21240 pycom15g38790
rosa_chinensis	RchiOBHm_Chr6g0249411
rosa_laevigata	RLG00000015582
rosa_multiflora	Rmu_sc0000278.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217740
rosa_rugosa	Rorug05G0492100
rosa_samantha	Rh6AG002000 Rh6BG008200 Rh6CG001100 Rh6DG001200
rosa_wichuraiana	Rw6G000250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	506
Acc16I	TGCGCA	1 cut(s)	1436
Acc36I	ACCTGC	3 cut(s)	1069, 1211, 1425
AccI	GTMKAC	1 cut(s)	822
AciI	CCGC	2 cut(s)	1303, 1339
AclWI	GGATC	4 cut(s)	268, 618, 745, 1294
AcsI	RAATTY	7 cut(s)	324, 488, 1038, 1049, 1212, 1505, 1564
AcuI	CTGAAG	5 cut(s)	614, 1016, 1104, 1105, 1706
AfaI	GTAC	3 cut(s)	211, 779, 1166
AfiI	CCNNNNNNNGG	1 cut(s)	1354
AgeI	ACCGGT	1 cut(s)	1002
AjnI	CCWGG	2 cut(s)	276, 420
AjuI	GAANNNNNNNTTGG	2 cut(s)	899, 931
Alw21I	GWGCWC	2 cut(s)	877, 1119
Alw26I	GTCTC	3 cut(s)	90, 947, 1338
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	4 cut(s)	268, 618, 745, 1294
AoxI	GGCC	1 cut(s)	1391
ApaLI	GTGCAC	1 cut(s)	873
ApeKI	GCWGC	2 cut(s)	1138, 1552
ApoI	RAATTY	7 cut(s)	324, 488, 1038, 1049, 1212, 1505, 1564
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
AseI	ATTAAT	1 cut(s)	1067
AsiGI	ACCGGT	1 cut(s)	1002
Asp700I	GAANNNNTTC	1 cut(s)	363
AspLEI	GCGC	1 cut(s)	1437
AspS9I	GGNCC	1 cut(s)	1223
AsuHPI	GGTGA	1 cut(s)	559
AsuNHI	GCTAGC	1 cut(s)	119
AvaII	GGWCC	1 cut(s)	1223
BaeGI	GKGCMC	1 cut(s)	877
BbsI	GAAGAC	2 cut(s)	504, 1457
Bbv12I	GWGCWC	2 cut(s)	877, 1119
BbvI	GCAGC	2 cut(s)	1125, 1564
BccI	CCATC	5 cut(s)	349, 514, 533, 1399, 1541
BciT130I	CCWGG	2 cut(s)	278, 422
BciVI	GTATCC	2 cut(s)	1113, 1355
BclI	TGATCA	1 cut(s)	319
BcoDI	GTCTC	3 cut(s)	90, 947, 1338
BfaI	CTAG	5 cut(s)	120, 266, 305, 572, 933
BfmI	CTRYAG	1 cut(s)	911
BfuAI	ACCTGC	3 cut(s)	1069, 1211, 1425
BfuI	GTATCC	2 cut(s)	1113, 1355
BisI	GCNGC	3 cut(s)	1139, 1340, 1553
BlsI	GCNGC	3 cut(s)	1140, 1341, 1554
Bme1390I	CCNGG	2 cut(s)	278, 422
Bme18I	GGWCC	1 cut(s)	1223
BmgT120I	GGNCC	1 cut(s)	1223
BmiI	GGNNCC	1 cut(s)	990
BmrFI	CCNGG	2 cut(s)	278, 422
BmsI	GCATC	4 cut(s)	46, 106, 1267, 1429
BmtI	GCTAGC	1 cut(s)	123
BpiI	GAAGAC	2 cut(s)	504, 1457
BplI	GAGNNNNNCTC	2 cut(s)	377, 409
BpmI	CTGGAG	1 cut(s)	404
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	2 cut(s)	785, 923
BsaBI	GATNNNNATC	1 cut(s)	1473
BsaJI	CCNNGG	2 cut(s)	515, 687
BsaWI	WCCGGW	1 cut(s)	1002
Bsc4I	CCNNNNNNNGG	1 cut(s)	1354
Bse118I	RCCGGY	1 cut(s)	1002
Bse3DI	GCAATG	1 cut(s)	1444
Bse8I	GATNNNNATC	1 cut(s)	1473
BseBI	CCWGG	2 cut(s)	278, 422
BseDI	CCNNGG	2 cut(s)	515, 687
BseGI	GGATG	3 cut(s)	121, 525, 1474
BseJI	GATNNNNATC	1 cut(s)	1473
BseLI	CCNNNNNNNGG	1 cut(s)	1354
BseMI	GCAATG	1 cut(s)	1444
BseMII	CTCAG	4 cut(s)	382, 645, 1152, 1568
BseRI	GAGGAG	1 cut(s)	125
BseSI	GKGCMC	1 cut(s)	877
BseXI	GCAGC	2 cut(s)	1125, 1564
Bsh1285I	CGRYCG	1 cut(s)	1007
BshFI	GGCC	1 cut(s)	1393
BshTI	ACCGGT	1 cut(s)	1002
BsiEI	CGRYCG	1 cut(s)	1007
BsiHKAI	GWGCWC	2 cut(s)	877, 1119
BsiSI	CCGG	1 cut(s)	1003
BslFI	GGGAC	2 cut(s)	236, 494
BslI	CCNNNNNNNGG	1 cut(s)	1354
BsmAI	GTCTC	3 cut(s)	90, 947, 1338
BsmBI	CGTCTC	1 cut(s)	947
BsmFI	GGGAC	2 cut(s)	236, 494
BsnI	GGCC	1 cut(s)	1393
Bsp1286I	GDGCHC	2 cut(s)	877, 1119
Bsp143I	GATC	5 cut(s)	273, 319, 610, 750, 1299
BspACI	CCGC	2 cut(s)	1303, 1339
BspANI	GGCC	1 cut(s)	1393
BspCNI	CTCAG	4 cut(s)	381, 646, 1153, 1569
BspHI	TCATGA	2 cut(s)	316, 1488
BspLI	GGNNCC	1 cut(s)	990
BspMI	ACCTGC	3 cut(s)	1069, 1211, 1425
BspOI	GCTAGC	1 cut(s)	123
BspPI	GGATC	4 cut(s)	268, 618, 745, 1294
BspQI	GCTCTTC	1 cut(s)	1124
BsrDI	GCAATG	1 cut(s)	1444
BsrFI	RCCGGY	1 cut(s)	1002
BssAI	RCCGGY	1 cut(s)	1002
BssECI	CCNNGG	2 cut(s)	515, 687
BssMI	GATC	5 cut(s)	273, 319, 610, 750, 1299
BssNAI	GTATAC	1 cut(s)	823
BssT1I	CCWWGG	2 cut(s)	515, 687
Bst1107I	GTATAC	1 cut(s)	823
Bst2UI	CCWGG	2 cut(s)	278, 422
Bst4CI	ACNGT	4 cut(s)	70, 106, 915, 1645
Bst6I	CTCTTC	3 cut(s)	318, 369, 1124
BstAPI	GCANNNNNTGC	1 cut(s)	1138
BstC8I	GCNNGC	5 cut(s)	121, 1090, 1130, 1433, 1611
BstDEI	CTNAG	9 cut(s)	204, 368, 581, 654, 668, 869, 1161, 1366, 1577
BstF5I	GGATG	3 cut(s)	121, 525, 1474
BstHHI	GCGC	1 cut(s)	1437
BstKTI	GATC	5 cut(s)	276, 322, 613, 753, 1302
BstMAI	GTCTC	3 cut(s)	90, 947, 1338
BstMBI	GATC	5 cut(s)	273, 319, 610, 750, 1299
BstMCI	CGRYCG	1 cut(s)	1007
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1606
BstNI	CCWGG	2 cut(s)	278, 422
BstSCI	CCNGG	2 cut(s)	276, 420
BstSFI	CTRYAG	1 cut(s)	911
BstSLI	GKGCMC	1 cut(s)	877
BstV1I	GCAGC	2 cut(s)	1125, 1564
BstV2I	GAAGAC	2 cut(s)	504, 1457
BstX2I	RGATCY	2 cut(s)	610, 750
BstYI	RGATCY	2 cut(s)	610, 750
BstZ17I	GTATAC	1 cut(s)	823
BsuI	GTATCC	2 cut(s)	1113, 1355
BsuRI	GGCC	1 cut(s)	1393
BtgZI	GCGATG	1 cut(s)	1191
BtsCI	GGATG	3 cut(s)	121, 525, 1474
BtsI	GCAGTG	3 cut(s)	130, 1149, 1686
BtsIMutI	CAGTG	5 cut(s)	130, 376, 992, 1149, 1686
BveI	ACCTGC	3 cut(s)	1069, 1211, 1425
Cac8I	GCNNGC	5 cut(s)	121, 1090, 1130, 1433, 1611
CciI	TCATGA	2 cut(s)	316, 1488
CfoI	GCGC	1 cut(s)	1437
Cfr10I	RCCGGY	1 cut(s)	1002
Cfr13I	GGNCC	1 cut(s)	1223
Csp6I	GTAC	3 cut(s)	210, 778, 1165
CspAI	ACCGGT	1 cut(s)	1002
CviAII	CATG	4 cut(s)	317, 1330, 1350, 1489
CviQI	GTAC	3 cut(s)	210, 778, 1165
DdeI	CTNAG	9 cut(s)	204, 368, 581, 654, 668, 869, 1161, 1366, 1577
DpnI	GATC	5 cut(s)	275, 321, 612, 752, 1301
DpnII	GATC	5 cut(s)	273, 319, 610, 750, 1299
DraI	TTTAAA	1 cut(s)	447
DrdI	GACNNNNNNGTC	1 cut(s)	506
DseDI	GACNNNNNNGTC	1 cut(s)	506
Eam1104I	CTCTTC	3 cut(s)	318, 369, 1124
EarI	CTCTTC	3 cut(s)	318, 369, 1124
Eco130I	CCWWGG	2 cut(s)	515, 687
Eco47I	GGWCC	1 cut(s)	1223
Eco57I	CTGAAG	5 cut(s)	614, 1016, 1104, 1105, 1706
EcoRI	GAATTC	1 cut(s)	1505
EcoRII	CCWGG	2 cut(s)	276, 420
EcoT14I	CCWWGG	2 cut(s)	515, 687
EcoT22I	ATGCAT	1 cut(s)	724
ErhI	CCWWGG	2 cut(s)	515, 687
Esp3I	CGTCTC	1 cut(s)	947
FaeI	CATG	4 cut(s)	320, 1333, 1353, 1492
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FaqI	GGGAC	2 cut(s)	236, 494
FatI	CATG	4 cut(s)	316, 1329, 1349, 1488
FbaI	TGATCA	1 cut(s)	319
FblI	GTMKAC	1 cut(s)	822
Fnu4HI	GCNGC	3 cut(s)	1139, 1340, 1553
FokI	GGATG	3 cut(s)	128, 532, 1461
Fsp4HI	GCNGC	3 cut(s)	1139, 1340, 1553
FspBI	CTAG	5 cut(s)	120, 266, 305, 572, 933
FspI	TGCGCA	1 cut(s)	1436
GlaI	GCGC	1 cut(s)	1436
GluI	GCNGC	3 cut(s)	1139, 1340, 1553
GsuI	CTGGAG	1 cut(s)	404
HaeIII	GGCC	1 cut(s)	1393
HapII	CCGG	1 cut(s)	1003
HhaI	GCGC	1 cut(s)	1437
Hin1II	CATG	4 cut(s)	320, 1333, 1353, 1492
Hin6I	GCGC	1 cut(s)	1435
HinP1I	GCGC	1 cut(s)	1435
HindIII	AAGCTT	2 cut(s)	713, 1607
HinfI	GANTC	6 cut(s)	269, 457, 473, 577, 1196, 1358
HpaII	CCGG	1 cut(s)	1003
HphI	GGTGA	1 cut(s)	559
Hpy166II	GTNNAC	3 cut(s)	173, 823, 875
Hpy188I	TCNGA	4 cut(s)	406, 711, 1162, 1653
Hpy188III	TCNNGA	7 cut(s)	317, 329, 572, 748, 978, 1123, 1489
Hpy8I	GTNNAC	3 cut(s)	173, 823, 875
HpyAV	CCTTC	5 cut(s)	137, 764, 978, 1039, 1681
HpyCH4III	ACNGT	4 cut(s)	70, 106, 915, 1645
HpyCH4IV	ACGT	2 cut(s)	183, 1485
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1606
HpyF3I	CTNAG	9 cut(s)	204, 368, 581, 654, 668, 869, 1161, 1366, 1577
HpySE526I	ACGT	2 cut(s)	183, 1485
Hsp92II	CATG	4 cut(s)	320, 1333, 1353, 1492
HspAI	GCGC	1 cut(s)	1435
Ksp22I	TGATCA	1 cut(s)	319
Kzo9I	GATC	5 cut(s)	273, 319, 610, 750, 1299
LguI	GCTCTTC	1 cut(s)	1124
LmnI	GCTCC	2 cut(s)	839, 1125
Lsp1109I	GCAGC	2 cut(s)	1125, 1564
LweI	GCATC	4 cut(s)	46, 106, 1267, 1429
MaeI	CTAG	5 cut(s)	120, 266, 305, 572, 933
MaeII	ACGT	2 cut(s)	183, 1485
MaeIII	GTNAC	4 cut(s)	32, 335, 348, 935
MalI	GATC	5 cut(s)	275, 321, 612, 752, 1301
MboI	GATC	5 cut(s)	273, 319, 610, 750, 1299
MflI	RGATCY	2 cut(s)	610, 750
MhlI	GDGCHC	2 cut(s)	877, 1119
MlyI	GAGTC	2 cut(s)	263, 482
MmeI	TCCRAC	3 cut(s)	73, 120, 897
Mph1103I	ATGCAT	1 cut(s)	724
MroXI	GAANNNNTTC	1 cut(s)	363
MseI	TTAA	8 cut(s)	288, 446, 621, 773, 941, 1035, 1067, 1401
MslI	CAYNNNNRTG	3 cut(s)	39, 882, 1530
MspI	CCGG	1 cut(s)	1003
MspR9I	CCNGG	2 cut(s)	278, 422
MvaI	CCWGG	2 cut(s)	278, 422
MwoI	GCNNNNNNNGC	4 cut(s)	11, 1016, 1138, 1606
NdeII	GATC	5 cut(s)	273, 319, 610, 750, 1299
NheI	GCTAGC	1 cut(s)	119
NlaIII	CATG	4 cut(s)	320, 1333, 1353, 1492
NlaIV	GGNNCC	1 cut(s)	990
NmeAIII	GCCGAG	1 cut(s)	1315
NmuCI	GTSAC	4 cut(s)	32, 335, 348, 935
NsbI	TGCGCA	1 cut(s)	1436
NsiI	ATGCAT	1 cut(s)	724
PagI	TCATGA	2 cut(s)	316, 1488
PciSI	GCTCTTC	1 cut(s)	1124
PdmI	GAANNNNTTC	1 cut(s)	363
PfeI	GAWTC	4 cut(s)	457, 577, 1196, 1358
PflFI	GACNNNGTC	1 cut(s)	1373
PfoI	TCCNGGA	2 cut(s)	276, 420
PinAI	ACCGGT	1 cut(s)	1002
PkrI	GCNGC	3 cut(s)	1140, 1341, 1554
PleI	GAGTC	2 cut(s)	263, 481
PpsI	GAGTC	2 cut(s)	263, 481
PshBI	ATTAAT	1 cut(s)	1067
Psp6I	CCWGG	2 cut(s)	276, 420
PspGI	CCWGG	2 cut(s)	276, 420
PspN4I	GGNNCC	1 cut(s)	990
PspPI	GGNCC	1 cut(s)	1223
PsuI	RGATCY	2 cut(s)	610, 750
PsyI	GACNNNGTC	1 cut(s)	1373
RsaI	GTAC	3 cut(s)	211, 779, 1166
RsaNI	GTAC	3 cut(s)	210, 778, 1165
RseI	CAYNNNNRTG	3 cut(s)	39, 882, 1530
SapI	GCTCTTC	1 cut(s)	1124
SaqAI	TTAA	8 cut(s)	288, 446, 621, 773, 941, 1035, 1067, 1401
SatI	GCNGC	3 cut(s)	1139, 1340, 1553
Sau3AI	GATC	5 cut(s)	273, 319, 610, 750, 1299
Sau96I	GGNCC	1 cut(s)	1223
SchI	GAGTC	2 cut(s)	263, 482
ScrFI	CCNGG	2 cut(s)	278, 422
SduI	GDGCHC	2 cut(s)	877, 1119
SfaNI	GCATC	4 cut(s)	46, 106, 1267, 1429
SfcI	CTRYAG	1 cut(s)	911
SinI	GGWCC	1 cut(s)	1223
SmiMI	CAYNNNNRTG	3 cut(s)	39, 882, 1530
SmlI	CTYRAG	2 cut(s)	800, 902
SmoI	CTYRAG	2 cut(s)	800, 902
SsiI	CCGC	2 cut(s)	1303, 1339
SspMI	CTAG	5 cut(s)	120, 266, 305, 572, 933
StyD4I	CCNGG	2 cut(s)	276, 420
StyI	CCWWGG	2 cut(s)	515, 687
TaaI	ACNGT	4 cut(s)	70, 106, 915, 1645
TaiI	ACGT	2 cut(s)	186, 1488
TaqI	TCGA	2 cut(s)	272, 849
TatI	WGTACW	1 cut(s)	777
TauI	GCSGC	1 cut(s)	1342
TfiI	GAWTC	4 cut(s)	457, 577, 1196, 1358
Tru1I	TTAA	8 cut(s)	288, 446, 621, 773, 941, 1035, 1067, 1401
Tru9I	TTAA	8 cut(s)	288, 446, 621, 773, 941, 1035, 1067, 1401
TscAI	CASTG	5 cut(s)	130, 376, 999, 1156, 1686
TseFI	GTSAC	4 cut(s)	32, 335, 348, 935
TseI	GCWGC	2 cut(s)	1138, 1552
Tsp45I	GTSAC	4 cut(s)	32, 335, 348, 935
TspDTI	ATGAA	8 cut(s)	305, 570, 691, 872, 1224, 1257, 1350, 1463
TspGWI	ACGGA	3 cut(s)	825, 872, 1095
TspRI	CASTG	5 cut(s)	130, 376, 999, 1156, 1686
Tth111I	GACNNNGTC	1 cut(s)	1373
VneI	GTGCAC	1 cut(s)	873
VpaK11BI	GGWCC	1 cut(s)	1223
VspI	ATTAAT	1 cut(s)	1067
XapI	RAATTY	7 cut(s)	324, 488, 1038, 1049, 1212, 1505, 1564
XbaI	TCTAGA	1 cut(s)	571
XmiI	GTMKAC	1 cut(s)	822
XmnI	GAANNNNTTC	1 cut(s)	363
XspI	CTAG	5 cut(s)	120, 266, 305, 572, 933
Zsp2I	ATGCAT	1 cut(s)	724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.