Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004950

Physical Location & Seq

Genomic Coordinates Reverse (-)

68156274 .. 68169002

Gene Structure 12729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015582

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGTGGTGTCTGCTGTCTAGGGCTGGTGAGGAGCGGCATTTTGGTGAAGGATCAACGATTGAGGGACATCACACTATCAATTGGTCTTCTGCCATCGTTTTAGATGGTGGCGGAGCTGGATCTGCTAACCACCTGCACTTGTTAATCCACATGGCTCATCTTGCAACCAACAACACTCAGGGTCACTCTTATGATGAGAATAATGATGCCCAGAAAACTGTATTTGATTTGGGTGCATTTGTTGGAGACTTGACTGTTGAGGAGGATGCTAGCAGTGATGACATATCGTTGGAAGGACTGCAACAAGAATTAGAAGAATGTAAACAAGATGACGTAGTTGCGAATATATTGTCTAAGGGTACGAAACTACGCGACTATGCAAAGGGGGTTGAGAACAACATACGACAAGTTGAACTGGACTCGATCCAGGATTATATTAAAGAAAGTGATAATCTAGTATCTCTTCATGATCAAATTCGTGATTGTGACAGCATCTTGTCACAGATGGAAACTCTTCTCAGTGGATTTCAGGCAGAGATAGGTTCAATAAGTTCCGACATCAAAGTTCTCCAGGAGAAGTCTATGGATATGGGTTTAAAGTTGAAGAATCGCAAGGTGGCAGAGTCAAAATTGGCAAAATTTGTTGAAGACATTATAGTCCCTCCAAGGATGGTAGATATAATTGTTGATGGCGAGGTGAATGATGAATATATGAGAACTCTAGAGATTCTTAGCAAGAAGCTGAAGTTTGTTGAAGTGGATCTTATGGTTAAAACTGCCAAAGCTCTAAAAGATGTTCAGCCTGAGCTCGAAAAACTTAGACAAAAAGCAGTTTCCAAGGTGTTTGACTTCATTGTTCAGAAGCTTTATGCATTGAGAAAACCAAAAACAAATATCCAGATCCTTCAACAGAATGTTCTCTTAAAGTACAAGTATGTTATTTCGTTCCTCAAGGAACACGGAAAGGAGGTATACATTGAGGTTCGTGGAGCATACATCGACACAATGAACAAGGTTCTAAGTGCACATTTCCGTGCTTATATTCAGGCACTTGAGAAACTACAGTTGGATATTGCCACATCTAGTGACTTAATTGGCGTGGAGACGAGAAATACAAGTCTATTTTCAAGAGGAAGGGAACCACTGAAGAACCGGTCGGCTGTTTTTGCTCTTGGAGAGAGGATTAAAATTTTGAAGGAAATTGAAGAACCTGCATTAATTCCACATATAGCTGAAGCCAGCTCTATCAAGTATCCGTATGAGGTGCTCTTCAGGAGCTTGCACAAGCTGCTTATGGACACTGCTACTTCTGAGTACCATTTCTGCGATGATTTCTTTTGCGAAGAATCCATATTTTATGAAATTTTTGCAGGTCCATTTGCTGTAATTGATGAACACTTCAATTCAATACTTCCAAATTGTTATGATGCTATTGGTGTAATGCTTATGATTCGCATTATACACCAGCACCAGCTCATCATGTCTCGGCGGCGTATCCCATGCTTGGATTCATACTTAGACAAGGTCAATATTGCCCTTTGGCCTCGTTTTAAGATGGTGTTTGACCTGCATCTCAACAGCCTGCGCAATGCGAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCACTACGTCATGAGGCGATATGCTGAATTCACAGCTTCACTTATCCACCTCAATGTTGAATATGGAGATGGGCAGCTTGAATTGAATTTGGAAAGACTGAGAATGGCTGTTGATGACTTGCTTATCAAGCTTGCTAAAGCATTTCCAAGACCAAAACTGCAAACTGTGTTTCTGATAAACAACTACGATCTGACTATTGCAGTGCTTAAGGAAGCTGGTCCGGAAGGTGGTAAAATTCAAATCCACTTTGAGGAACTGCTGAAAAGCAACACAGCATTATTTGTGGAAGAACTATTACTAGAGCATTTTAGTGATTTAATCAAGTTTGTCAAAACCCGGGCTTCGGAGGACCCAGGTGCTAATGTTGAGAATCCTGTAACTGGCACGGAGGTTGAGCCACTTGTGAAGGACTTTGCAAGTAGATGGAAAGCTGCAATTGAGCTGATGCACAAGGATGTCATAACTTCTTTCAGCAACTTCTTGTGTGGTATGGAAATCTTGAGGGCTGCATTGACTCAGCTACTGCTTTATTATACTAGGCTCTCCGATTGCATAAAGAGGATTGTCGGTGGGTCTACTCTTAACAAGGATCTGGTGTCCATATCCTCAATCATGTATGAAATTAAGAAATACTCGAGGACTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000149 GO:0000902 GO:0000904 GO:0000938 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006892 GO:0006896 GO:0007034 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0016482 GO:0017016 GO:0017137 GO:0019899 GO:0019905 GO:0019953 GO:0022414 GO:0030154 GO:0031090 GO:0031267 GO:0031410 GO:0031982 GO:0031984 GO:0032456 GO:0032501 GO:0032502 GO:0032588 GO:0032989 GO:0032991 GO:0040007 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044706 GO:0046907 GO:0048193 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051020 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0060560 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps52

Protein Analysis

759

Amino Acids

86.33

Weight (kDa)

5.66

Isoelectric Point (pI)

41.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec3_CC	PF09763	128 - 238	3.1e-07	Exocyst complex component Sec3, coiled-coil
Vps52_CC	PF04129	144 - 317	4e-66	Vps52/Sac2 family, coiled-coil
Vps52_C	PF20655	334 - 638	8.5e-129	Vps52, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71270 AT1G71300 AT1G71300
fragaria_vesca	FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140 FvH4_2g00140
malus_domestica	MD08G1244900.v1.1 MD15G1440000.v1.1
prunus_persica	Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1 Prupe.1G566400_v2.0.a1
pyrus_communis	pycom08g21240 pycom15g38790
rosa_chinensis	RchiOBHm_Chr6g0249411
rosa_laevigata	RLG00000015582
rosa_multiflora	Rmu_sc0000278.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217740
rosa_rugosa	Rorug05G0492100
rosa_samantha	Rh6AG002000 Rh6BG008200 Rh6CG001100 Rh6DG001200
rosa_wichuraiana	Rw6G000250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	141
AasI	GACNNNNNNGTC	1 cut(s)	656
Acc16I	TGCGCA	1 cut(s)	1586
Acc36I	ACCTGC	4 cut(s)	141, 1219, 1361, 1575
AccBSI	CCGCTC	1 cut(s)	34
AccI	GTMKAC	2 cut(s)	972, 2204
AccII	CGCG	1 cut(s)	372
AccIII	TCCGGA	1 cut(s)	1849
AciI	CCGC	3 cut(s)	34, 111, 1489
AclWI	GGATC	6 cut(s)	58, 127, 418, 768, 895, 2226
AcsI	RAATTY	7 cut(s)	474, 638, 1188, 1362, 1655, 1714, 1863
AcuI	CTGAAG	4 cut(s)	764, 1166, 1254, 1255
AfaI	GTAC	3 cut(s)	361, 929, 1316
AfiI	CCNNNNNNNGG	5 cut(s)	1504, 1856, 1879, 1972, 2009
AflII	CTTAAG	1 cut(s)	1835
AgeI	ACCGGT	1 cut(s)	1152
AjnI	CCWGG	3 cut(s)	426, 570, 1981
AjuI	GAANNNNNNNTTGG	2 cut(s)	1049, 1081
Alw21I	GWGCWC	3 cut(s)	810, 1027, 1269
Alw26I	GTCTC	3 cut(s)	240, 1097, 1488
Alw44I	GTGCAC	1 cut(s)	1023
AlwI	GGATC	6 cut(s)	58, 127, 418, 768, 895, 2226
AlwNI	CAGNNNCTG	1 cut(s)	2152
Ama87I	CYCGRG	2 cut(s)	1965, 2263
Aor13HI	TCCGGA	1 cut(s)	1849
AoxI	GGCC	1 cut(s)	1541
ApaLI	GTGCAC	1 cut(s)	1023
ApeKI	GCWGC	4 cut(s)	1288, 1702, 2060, 2135
ApoI	RAATTY	7 cut(s)	474, 638, 1188, 1362, 1655, 1714, 1863
ArsI	GACNNNNNNTTYG	2 cut(s)	335, 367
AseI	ATTAAT	1 cut(s)	1217
AsiGI	ACCGGT	1 cut(s)	1152
Asp700I	GAANNNNTTC	1 cut(s)	513
AspLEI	GCGC	1 cut(s)	1587
AspS9I	GGNCC	3 cut(s)	1373, 1847, 1978
AsuC2I	CCSGG	2 cut(s)	1966, 1967
AsuHPI	GGTGA	3 cut(s)	38, 56, 709
AsuNHI	GCTAGC	1 cut(s)	269
AvaI	CYCGRG	2 cut(s)	1965, 2263
AvaII	GGWCC	3 cut(s)	1373, 1847, 1978
BaeGI	GKGCMC	1 cut(s)	1027
BanII	GRGCYC	1 cut(s)	810
BarI	GAAGNNNNNNTAC	2 cut(s)	1908, 1940
BbsI	GAAGAC	3 cut(s)	78, 654, 1607
Bbv12I	GWGCWC	3 cut(s)	810, 1027, 1269
BbvI	GCAGC	4 cut(s)	1275, 1714, 2047, 2122
BccI	CCATC	8 cut(s)	98, 101, 499, 664, 683, 1549, 1691, 2046
BciT130I	CCWGG	3 cut(s)	428, 572, 1983
BciVI	GTATCC	2 cut(s)	1263, 1505
BclI	TGATCA	1 cut(s)	469
BcnI	CCSGG	2 cut(s)	1966, 1967
BcoDI	GTCTC	3 cut(s)	240, 1097, 1488
BfaI	CTAG	8 cut(s)	18, 270, 455, 722, 1083, 1928, 2166, 2275
BfmI	CTRYAG	1 cut(s)	1061
BfrI	CTTAAG	1 cut(s)	1835
BfuAI	ACCTGC	4 cut(s)	141, 1219, 1361, 1575
BfuI	GTATCC	2 cut(s)	1263, 1505
BisI	GCNGC	6 cut(s)	35, 1289, 1490, 1703, 2061, 2136
BlsI	GCNGC	6 cut(s)	36, 1290, 1491, 1704, 2062, 2137
Bme1390I	CCNGG	5 cut(s)	428, 572, 1966, 1967, 1983
Bme18I	GGWCC	3 cut(s)	1373, 1847, 1978
BmeT110I	CYCGRG	2 cut(s)	1965, 2263
BmgT120I	GGNCC	3 cut(s)	1373, 1847, 1978
BmiI	GGNNCC	2 cut(s)	1140, 1980
BmrFI	CCNGG	5 cut(s)	428, 572, 1966, 1967, 1983
BmsI	GCATC	6 cut(s)	196, 256, 501, 1417, 1579, 2064
BmtI	GCTAGC	1 cut(s)	273
BpiI	GAAGAC	3 cut(s)	78, 654, 1607
BpmI	CTGGAG	1 cut(s)	554
Bpu10I	CCTNAGC	1 cut(s)	804
BpuEI	CTTGAG	3 cut(s)	935, 1073, 2149
BpuMI	CCSGG	2 cut(s)	1966, 1967
BsaBI	GATNNNNATC	1 cut(s)	1623
BsaJI	CCNNGG	4 cut(s)	665, 837, 1965, 1981
BsaWI	WCCGGW	2 cut(s)	1152, 1849
Bsc4I	CCNNNNNNNGG	5 cut(s)	1504, 1856, 1879, 1972, 2009
Bse118I	RCCGGY	1 cut(s)	1152
Bse1I	ACTGG	2 cut(s)	420, 2014
Bse3DI	GCAATG	1 cut(s)	1594
Bse8I	GATNNNNATC	1 cut(s)	1623
BseAI	TCCGGA	1 cut(s)	1849
BseBI	CCWGG	3 cut(s)	428, 572, 1983
BseDI	CCNNGG	4 cut(s)	665, 837, 1965, 1981
BseGI	GGATG	4 cut(s)	271, 675, 1624, 2089
BseJI	GATNNNNATC	1 cut(s)	1623
BseLI	CCNNNNNNNGG	5 cut(s)	1504, 1856, 1879, 1972, 2009
BseMI	GCAATG	1 cut(s)	1594
BseMII	CTCAG	6 cut(s)	191, 532, 795, 1302, 1718, 2159
BseNI	ACTGG	2 cut(s)	420, 2014
BseRI	GAGGAG	2 cut(s)	44, 275
BseSI	GKGCMC	1 cut(s)	1027
BseXI	GCAGC	4 cut(s)	1275, 1714, 2047, 2122
BsgI	GTGCAG	1 cut(s)	119
Bsh1236I	CGCG	1 cut(s)	372
Bsh1285I	CGRYCG	1 cut(s)	1157
BshFI	GGCC	1 cut(s)	1543
BshTI	ACCGGT	1 cut(s)	1152
BsiEI	CGRYCG	1 cut(s)	1157
BsiHKAI	GWGCWC	3 cut(s)	810, 1027, 1269
BsiHKCI	CYCGRG	2 cut(s)	1965, 2263
BsiSI	CCGG	3 cut(s)	1153, 1850, 1966
BslFI	GGGAC	2 cut(s)	78, 644
BslI	CCNNNNNNNGG	5 cut(s)	1504, 1856, 1879, 1972, 2009
BsmAI	GTCTC	3 cut(s)	240, 1097, 1488
BsmBI	CGTCTC	1 cut(s)	1097
BsmFI	GGGAC	2 cut(s)	78, 644
BsnI	GGCC	1 cut(s)	1543
BsoBI	CYCGRG	2 cut(s)	1965, 2263
Bsp1286I	GDGCHC	3 cut(s)	810, 1027, 1269
Bsp13I	TCCGGA	1 cut(s)	1849
Bsp143I	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
BspACI	CCGC	3 cut(s)	34, 111, 1489
BspANI	GGCC	1 cut(s)	1543
BspCNI	CTCAG	6 cut(s)	190, 531, 796, 1303, 1719, 2158
BspEI	TCCGGA	1 cut(s)	1849
BspFNI	CGCG	1 cut(s)	372
BspHI	TCATGA	2 cut(s)	466, 1638
BspLI	GGNNCC	2 cut(s)	1140, 1980
BspMI	ACCTGC	4 cut(s)	141, 1219, 1361, 1575
BspOI	GCTAGC	1 cut(s)	273
BspPI	GGATC	6 cut(s)	58, 127, 418, 768, 895, 2226
BspQI	GCTCTTC	1 cut(s)	1274
BspTI	CTTAAG	1 cut(s)	1835
BsrBI	CCGCTC	1 cut(s)	34
BsrDI	GCAATG	1 cut(s)	1594
BsrFI	RCCGGY	1 cut(s)	1152
BsrI	ACTGG	2 cut(s)	420, 2014
BssAI	RCCGGY	1 cut(s)	1152
BssECI	CCNNGG	4 cut(s)	665, 837, 1965, 1981
BssMI	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
BssNAI	GTATAC	1 cut(s)	973
BssT1I	CCWWGG	2 cut(s)	665, 837
Bst1107I	GTATAC	1 cut(s)	973
Bst2UI	CCWGG	3 cut(s)	428, 572, 1983
Bst4CI	ACNGT	4 cut(s)	220, 256, 1065, 1795
Bst6I	CTCTTC	3 cut(s)	468, 519, 1274
BstAFI	CTTAAG	1 cut(s)	1835
BstAPI	GCANNNNNTGC	1 cut(s)	1288
BstC8I	GCNNGC	5 cut(s)	271, 1240, 1280, 1583, 1761
BstF5I	GGATG	4 cut(s)	271, 675, 1624, 2089
BstFNI	CGCG	1 cut(s)	372
BstHHI	GCGC	1 cut(s)	1587
BstKTI	GATC	8 cut(s)	53, 122, 426, 472, 763, 903, 1819, 2221
BstMAI	GTCTC	3 cut(s)	240, 1097, 1488
BstMBI	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
BstMCI	CGRYCG	1 cut(s)	1157
BstMWI	GCNNNNNNNGC	5 cut(s)	122, 161, 1166, 1288, 1756
BstNI	CCWGG	3 cut(s)	428, 572, 1983
BstSCI	CCNGG	5 cut(s)	426, 570, 1964, 1965, 1981
BstSFI	CTRYAG	1 cut(s)	1061
BstSLI	GKGCMC	1 cut(s)	1027
BstUI	CGCG	1 cut(s)	372
BstV1I	GCAGC	4 cut(s)	1275, 1714, 2047, 2122
BstV2I	GAAGAC	3 cut(s)	78, 654, 1607
BstX2I	RGATCY	4 cut(s)	119, 760, 900, 2218
BstYI	RGATCY	4 cut(s)	119, 760, 900, 2218
BstZ17I	GTATAC	1 cut(s)	973
BsuI	GTATCC	2 cut(s)	1263, 1505
BsuRI	GGCC	1 cut(s)	1543
BtgZI	GCGATG	1 cut(s)	1341
BtsCI	GGATG	4 cut(s)	271, 675, 1624, 2089
BtsI	GCAGTG	3 cut(s)	280, 1299, 1836
BtsIMutI	CAGTG	5 cut(s)	280, 526, 1142, 1299, 1836
BveI	ACCTGC	4 cut(s)	141, 1219, 1361, 1575
Cac8I	GCNNGC	5 cut(s)	271, 1240, 1280, 1583, 1761
CaiI	CAGNNNCTG	1 cut(s)	2152
CciI	TCATGA	2 cut(s)	466, 1638
CfoI	GCGC	1 cut(s)	1587
Cfr10I	RCCGGY	1 cut(s)	1152
Cfr13I	GGNCC	3 cut(s)	1373, 1847, 1978
Cfr9I	CCCGGG	1 cut(s)	1965
Csp6I	GTAC	3 cut(s)	360, 928, 1315
CspAI	ACCGGT	1 cut(s)	1152
CviAII	CATG	6 cut(s)	151, 467, 1480, 1500, 1639, 2242
CviQI	GTAC	3 cut(s)	360, 928, 1315
DpnI	GATC	8 cut(s)	52, 121, 425, 471, 762, 902, 1818, 2220
DpnII	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
DraI	TTTAAA	1 cut(s)	597
DrdI	GACNNNNNNGTC	1 cut(s)	656
DseDI	GACNNNNNNGTC	1 cut(s)	656
Eam1104I	CTCTTC	3 cut(s)	468, 519, 1274
EarI	CTCTTC	3 cut(s)	468, 519, 1274
EciI	GGCGGA	1 cut(s)	126
Ecl136II	GAGCTC	1 cut(s)	808
Eco130I	CCWWGG	2 cut(s)	665, 837
Eco24I	GRGCYC	1 cut(s)	810
Eco47I	GGWCC	3 cut(s)	1373, 1847, 1978
Eco53kI	GAGCTC	1 cut(s)	808
Eco57I	CTGAAG	4 cut(s)	764, 1166, 1254, 1255
Eco88I	CYCGRG	2 cut(s)	1965, 2263
EcoICRI	GAGCTC	1 cut(s)	808
EcoO109I	RGGNCCY	1 cut(s)	1978
EcoRI	GAATTC	1 cut(s)	1655
EcoRII	CCWGG	3 cut(s)	426, 570, 1981
EcoT14I	CCWWGG	2 cut(s)	665, 837
EcoT22I	ATGCAT	1 cut(s)	874
EcoT38I	GRGCYC	1 cut(s)	810
ErhI	CCWWGG	2 cut(s)	665, 837
Esp3I	CGTCTC	1 cut(s)	1097
FaeI	CATG	6 cut(s)	154, 470, 1483, 1503, 1642, 2245
FalI	AAGNNNNNCTT	2 cut(s)	747, 779
FaqI	GGGAC	2 cut(s)	78, 644
FatI	CATG	6 cut(s)	150, 466, 1479, 1499, 1638, 2241
FbaI	TGATCA	1 cut(s)	469
FblI	GTMKAC	2 cut(s)	972, 2204
Fnu4HI	GCNGC	6 cut(s)	35, 1289, 1490, 1703, 2061, 2136
FokI	GGATG	4 cut(s)	278, 682, 1611, 2096
FriOI	GRGCYC	1 cut(s)	810
Fsp4HI	GCNGC	6 cut(s)	35, 1289, 1490, 1703, 2061, 2136
FspBI	CTAG	8 cut(s)	18, 270, 455, 722, 1083, 1928, 2166, 2275
FspI	TGCGCA	1 cut(s)	1586
GlaI	GCGC	1 cut(s)	1586
GluI	GCNGC	6 cut(s)	35, 1289, 1490, 1703, 2061, 2136
GsuI	CTGGAG	1 cut(s)	554
HaeIII	GGCC	1 cut(s)	1543
HapII	CCGG	3 cut(s)	1153, 1850, 1966
HhaI	GCGC	1 cut(s)	1587
Hin1II	CATG	6 cut(s)	154, 470, 1483, 1503, 1642, 2245
Hin6I	GCGC	1 cut(s)	1585
HinP1I	GCGC	1 cut(s)	1585
HindIII	AAGCTT	2 cut(s)	863, 1757
HinfI	GANTC	9 cut(s)	419, 607, 623, 727, 1346, 1450, 1508, 1999, 2143
HpaII	CCGG	3 cut(s)	1153, 1850, 1966
HphI	GGTGA	3 cut(s)	38, 56, 709
Hpy166II	GTNNAC	4 cut(s)	323, 973, 1025, 2205
Hpy188I	TCNGA	7 cut(s)	556, 861, 1312, 1803, 1821, 1975, 2176
Hpy188III	TCNNGA	9 cut(s)	467, 479, 722, 898, 1128, 1273, 1639, 1850, 2128
Hpy8I	GTNNAC	4 cut(s)	323, 973, 1025, 2205
HpyAV	CCTTC	7 cut(s)	41, 287, 914, 1128, 1189, 1847, 2029
HpyCH4III	ACNGT	4 cut(s)	220, 256, 1065, 1795
HpyCH4IV	ACGT	2 cut(s)	333, 1635
HpyF10VI	GCNNNNNNNGC	5 cut(s)	122, 161, 1166, 1288, 1756
HpySE526I	ACGT	2 cut(s)	333, 1635
Hsp92II	CATG	6 cut(s)	154, 470, 1483, 1503, 1642, 2245
HspAI	GCGC	1 cut(s)	1585
Kpn2I	TCCGGA	1 cut(s)	1849
Ksp22I	TGATCA	1 cut(s)	469
Kzo9I	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
LguI	GCTCTTC	1 cut(s)	1274
LmnI	GCTCC	4 cut(s)	31, 113, 989, 1275
Lsp1109I	GCAGC	4 cut(s)	1275, 1714, 2047, 2122
LweI	GCATC	6 cut(s)	196, 256, 501, 1417, 1579, 2064
MaeI	CTAG	8 cut(s)	18, 270, 455, 722, 1083, 1928, 2166, 2275
MaeII	ACGT	2 cut(s)	333, 1635
MaeIII	GTNAC	5 cut(s)	182, 485, 498, 1085, 2005
MalI	GATC	8 cut(s)	52, 121, 425, 471, 762, 902, 1818, 2220
MbiI	CCGCTC	1 cut(s)	34
MboI	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
MfeI	CAATTG	2 cut(s)	79, 2064
MflI	RGATCY	4 cut(s)	119, 760, 900, 2218
MhlI	GDGCHC	3 cut(s)	810, 1027, 1269
MlyI	GAGTC	3 cut(s)	413, 632, 2137
MmeI	TCCRAC	4 cut(s)	223, 270, 579, 1047
Mph1103I	ATGCAT	1 cut(s)	874
MroI	TCCGGA	1 cut(s)	1849
MroXI	GAANNNNTTC	1 cut(s)	513
MslI	CAYNNNNRTG	6 cut(s)	42, 189, 1032, 1680, 1938, 2082
MspCI	CTTAAG	1 cut(s)	1835
MspI	CCGG	3 cut(s)	1153, 1850, 1966
MspR9I	CCNGG	5 cut(s)	428, 572, 1966, 1967, 1983
MunI	CAATTG	2 cut(s)	79, 2064
MvaI	CCWGG	3 cut(s)	428, 572, 1983
MvnI	CGCG	1 cut(s)	372
MwoI	GCNNNNNNNGC	5 cut(s)	122, 161, 1166, 1288, 1756
NciI	CCSGG	2 cut(s)	1966, 1967
NdeII	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
NheI	GCTAGC	1 cut(s)	269
NlaIII	CATG	6 cut(s)	154, 470, 1483, 1503, 1642, 2245
NlaIV	GGNNCC	2 cut(s)	1140, 1980
NmeAIII	GCCGAG	1 cut(s)	1465
NmuCI	GTSAC	4 cut(s)	182, 485, 498, 1085
NsbI	TGCGCA	1 cut(s)	1586
NsiI	ATGCAT	1 cut(s)	874
PaeR7I	CTCGAG	1 cut(s)	2263
PagI	TCATGA	2 cut(s)	466, 1638
PaqCI	CACCTGC	1 cut(s)	141
PciSI	GCTCTTC	1 cut(s)	1274
PdmI	GAANNNNTTC	1 cut(s)	513
PfeI	GAWTC	6 cut(s)	607, 727, 1346, 1450, 1508, 1999
PflFI	GACNNNGTC	1 cut(s)	1523
PfoI	TCCNGGA	2 cut(s)	426, 570
PinAI	ACCGGT	1 cut(s)	1152
PkrI	GCNGC	6 cut(s)	36, 1290, 1491, 1704, 2062, 2137
PleI	GAGTC	3 cut(s)	413, 631, 2137
PpsI	GAGTC	3 cut(s)	413, 631, 2137
PpuMI	RGGWCCY	1 cut(s)	1978
PshBI	ATTAAT	1 cut(s)	1217
Psp124BI	GAGCTC	1 cut(s)	810
Psp5II	RGGWCCY	1 cut(s)	1978
Psp6I	CCWGG	3 cut(s)	426, 570, 1981
PspGI	CCWGG	3 cut(s)	426, 570, 1981
PspN4I	GGNNCC	2 cut(s)	1140, 1980
PspPI	GGNCC	3 cut(s)	1373, 1847, 1978
PspPPI	RGGWCCY	1 cut(s)	1978
PspXI	VCTCGAGB	1 cut(s)	2263
PstNI	CAGNNNCTG	1 cut(s)	2152
PsuI	RGATCY	4 cut(s)	119, 760, 900, 2218
PsyI	GACNNNGTC	1 cut(s)	1523
RsaI	GTAC	3 cut(s)	361, 929, 1316
RsaNI	GTAC	3 cut(s)	360, 928, 1315
RseI	CAYNNNNRTG	6 cut(s)	42, 189, 1032, 1680, 1938, 2082
SacI	GAGCTC	1 cut(s)	810
SapI	GCTCTTC	1 cut(s)	1274
SatI	GCNGC	6 cut(s)	35, 1289, 1490, 1703, 2061, 2136
Sau3AI	GATC	8 cut(s)	50, 119, 423, 469, 760, 900, 1816, 2218
Sau96I	GGNCC	3 cut(s)	1373, 1847, 1978
SchI	GAGTC	3 cut(s)	413, 632, 2137
ScrFI	CCNGG	5 cut(s)	428, 572, 1966, 1967, 1983
SduI	GDGCHC	3 cut(s)	810, 1027, 1269
SfaNI	GCATC	6 cut(s)	196, 256, 501, 1417, 1579, 2064
SfcI	CTRYAG	1 cut(s)	1061
Sfr274I	CTCGAG	1 cut(s)	2263
SinI	GGWCC	3 cut(s)	1373, 1847, 1978
SlaI	CTCGAG	1 cut(s)	2263
SmaI	CCCGGG	1 cut(s)	1967
SmiMI	CAYNNNNRTG	6 cut(s)	42, 189, 1032, 1680, 1938, 2082
SmlI	CTYRAG	5 cut(s)	950, 1052, 1835, 2128, 2263
SmoI	CTYRAG	5 cut(s)	950, 1052, 1835, 2128, 2263
SsiI	CCGC	3 cut(s)	34, 111, 1489
SspI	AATATT	1 cut(s)	1531
SspMI	CTAG	8 cut(s)	18, 270, 455, 722, 1083, 1928, 2166, 2275
SstI	GAGCTC	1 cut(s)	810
StyD4I	CCNGG	5 cut(s)	426, 570, 1964, 1965, 1981
StyI	CCWWGG	2 cut(s)	665, 837
TaaI	ACNGT	4 cut(s)	220, 256, 1065, 1795
TaiI	ACGT	2 cut(s)	336, 1638
TaqI	TCGA	4 cut(s)	422, 810, 999, 2264
TatI	WGTACW	1 cut(s)	927
TauI	GCSGC	2 cut(s)	37, 1492
TfiI	GAWTC	6 cut(s)	607, 727, 1346, 1450, 1508, 1999
TscAI	CASTG	5 cut(s)	280, 526, 1149, 1306, 1836
TseFI	GTSAC	4 cut(s)	182, 485, 498, 1085
TseI	GCWGC	4 cut(s)	1288, 1702, 2060, 2135
Tsp45I	GTSAC	4 cut(s)	182, 485, 498, 1085
TspDTI	ATGAA	9 cut(s)	455, 720, 841, 1022, 1374, 1407, 1500, 1613, 2262
TspGWI	ACGGA	4 cut(s)	975, 1022, 1245, 2030
TspMI	CCCGGG	1 cut(s)	1965
TspRI	CASTG	5 cut(s)	280, 526, 1149, 1306, 1836
Tth111I	GACNNNGTC	1 cut(s)	1523
Vha464I	CTTAAG	1 cut(s)	1835
VneI	GTGCAC	1 cut(s)	1023
VpaK11BI	GGWCC	3 cut(s)	1373, 1847, 1978
VspI	ATTAAT	1 cut(s)	1217
XapI	RAATTY	7 cut(s)	474, 638, 1188, 1362, 1655, 1714, 1863
XbaI	TCTAGA	1 cut(s)	721
XhoI	CTCGAG	1 cut(s)	2263
XmaI	CCCGGG	1 cut(s)	1965
XmiI	GTMKAC	2 cut(s)	972, 2204
XmnI	GAANNNNTTC	1 cut(s)	513
XspI	CTAG	8 cut(s)	18, 270, 455, 722, 1083, 1928, 2166, 2275
Zsp2I	ATGCAT	1 cut(s)	874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.