FvH4_2g00731

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
768165 .. 771404
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g00731.t1

Sequence Viewer

Length: 2517 bp
ATGAGTAACAATGAGAGTTTCGTTGATGTTGAGTCGGGTGAAGAAGACTATTGCAACATGGAGGAGACAGAAGACTTTGAAACCACCAGAGAAACGTATGGAGCAGATGGCCCTTTTGAGTACAATGGGAAAAGTTTTCGTGAGCTGACACTCAAGGACTTTGATGGGACTTATTTCGATACTGTTGAGGATGCTGAAAAGTTCTATGAAATTTATTCTGCTGCACTTGGGTTCCGGATAAGGAGATTTAGGTGTGAGAAGGACCTGTCTGGCACTATCCGAAGAAGAGGGTGGGTGTGTTCCAAAGAAGGTGAAAAGAGACCAGCTAGAAAGAAAGAAGTACGGGCGGCTTCGTGCAAAACTCGTCCACCCAGGTCCAGCATGAGAGAGAAATGTATGGCTGCATTTGGTGTCAAGTATTCCGAGGAACTTGCTGCTTATTACGTGAAATATTTTACTACTCAGCACAGCCACGAGTTATTACCAGAGTCTAACAAGGCGAAATCGCTAATTTCTCATTGTGTTGGCAAGAAATTGGATTTGGCACAGGCAATTGCAATGCCCAAAGCCAATGACACAATCCAAACCTCTGCTGCAAATGATAATCACCCATCAGGTGGAAATGACTGTGGGGGTTCAACTACAGAATTGGATTTGGCGCACGCAGTTGGATTACGCAAAGACAGAGAGTCGATCCAAACATCTGATGCATATGCATATCACCCATCAGGTGGAAATGAGTTTGTGGATTTAACTACAGTATCGGATTTGGAGCAGGGAGTTGCAAGGCGCAAAGGTTCCGTTAACTCTGCTGCTGCATCTCAGCATATGGTTGAACCAGCAGGTGGACTTGCTTTTGGGAGTACTAATAGATCGGATCTGGGGCAGACAGTGCCAATGCACCAAGACTCAATCACAAACTCTTCTGCATATGAGTATATAGTTCATCCAGCAGGTGGATATGAGTTTGTCGATTTAATGAGGAGGGAGTTGTATAATAAGGTGGACGTAGAACACCGAGAAGCTTTGTTGAATGGTGACGCACAAGCGGCAATTGCCTTTATGAATGCAAGGGCTGCAGAAGATCCCGATTTCTTTTGTAAATTCTGCGTGGATGAACGAGGCAGGCTTGGAAATTTGTTTTGGAGAGACTCATGTTCATCGCTGGACTACGCTAGGTTTGGGGATGTATTGATCTTCGATTGCACATTCAAGACAAACATTTACCAGAGGCCGCTTGCTGTGTTTGTTGGTGTAAATAACCATCGGGGTACTGTATTATTTGGATCTGCAATACTGGTTGATGATACCATTGATACCTACAAGTGGGTTTTGCGAACATTTTTGGGTGCGATGAAGGACAAAAAACCAAGATCGGTTTTGACTGACGGGGATGACAAAATTCAAAACGCCGTTGCTGAACTTTTTCCTAAGGCCCGACAACGTCTATGTTCATGGAACATTGAGAAGAACTTGGCTACTATCATTAAGGATCCGGACGTGGAGAAAGCTTTCAGTCAATTTTTATACAATGCTATACCACCAGATGAGTGGGAACTGGGCTGGAAGTCTATGGTAGAGACCTATGGGCTTCAAGACAATTCATGGATTAATATGATGTACCACAGGCGCAAGAGATGGGCAGAAGCATTTTTTAAGGGTCATTTTTTTGGTGGAATGAGTAGCATGCAACGTTGCCAGGGGATCCATAGGAATCTGGAGAATGCAGTCGGTAAGTATGACAGGTTTTGTGAATATATTCCCCGAATGGACAAGACCCTGAGGAAAATGAGAAATATTGTTTGTGTTGATGACTTTAAATGCGAGAACTCAAAGCCAGACATTATTACTCACATGCGATCTTTGGAGCAGCAGATAGCTGACATCTTCACTCATGACATCTACCTGCTGATAATGCACCAGATAGATTGGGAGAGAAAGTACATAATCACCAAGTCTGAGCCATATGCAGGACGGGACGGTAAAGTGTTTCACCTGACCCAATATGACTTGCCGCACAGGCATTGGACTGTTAACTACCACCATAATATAAGCAAAGTGTGGTTCTTGTGTTCATGCAAACTATTTCAGTCGGACGGAATCCCTTGTGCTCATATATTTTCTGTAATGAAAGCTGAGCTGATATTGAAGTTACCTGAGTCCTTGGTTCTGAAGCGATGGACATTGGATGTGGGGAAGCCAGTGAACTTTCATAATTTGTCTGACAGGAATTCGCAAATGGTAAGGTATGCATCGTTGGTTTCCGAAATCAAAAGTGTATGTTTCCCAGCATCTATAACTGAGGAAGGAACCAAGAAGATGAAAGGTGAAATTGCCAAGCTGGCCCGAGATGGCACAGAGAGCCAAACCCACAGTGGATTGCAGAATTTGATACATCGTCACCAACTTCATGTTGGATCAGATGCCCACAGCTTTACCGGTATTTCAGTTGGCATCAATGCCGGACATTACACTCGCAGTCTTCCTCCGGGTGAATTCAGAACCTACTTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

839

Amino Acids

95.43

Weight (kDa)

6.68

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 67 - 162 2.6e-12 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 365 - 481 5.1e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 397 - 491 6.5e-22 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 833, 944
Acc36I ACCTGC 3 cut(s) 833, 944, 1914
AccB7I CCANNNNNTGG 4 cut(s) 617, 731, 845, 956
AccIII TCCGGA 2 cut(s) 234, 1495
AciI CCGC 4 cut(s) 347, 1049, 1235, 2015
AclI AACGTT 1 cut(s) 1693
AclWI GGATC 9 cut(s) 688, 885, 1079, 1294, 1487, 1500, 1699, 1712, 2425
AcsI RAATTY 7 cut(s) 210, 1103, 1135, 1401, 2230, 2386, 2495
AcuI CTGAAG 1 cut(s) 2192
AfaI GTAC 6 cut(s) 122, 342, 865, 1273, 1622, 1943
AfiI CCNNNNNNNGG 6 cut(s) 617, 731, 845, 956, 1326, 1970
AgeI ACCGGT 1 cut(s) 2438
AgsI TTSAA 8 cut(s) 80, 639, 836, 1033, 1213, 1406, 1595, 2149
AhdI GACNNNNNGTC 1 cut(s) 688
AjiI CACGTC 1 cut(s) 1501
AjnI CCWGG 2 cut(s) 371, 1698
AjuI GAANNNNNNNTTGG 4 cut(s) 524, 556, 1126, 1158
AluBI AGCT 9 cut(s) 145, 326, 1025, 1511, 1880, 2135, 2140, 2341, 2433
AluI AGCT 9 cut(s) 145, 326, 1025, 1511, 1880, 2135, 2140, 2341, 2433
Alw21I GWGCWC 1 cut(s) 2113
Alw26I GTCTC 4 cut(s) 59, 313, 1143, 1574
AlwI GGATC 9 cut(s) 688, 885, 1079, 1294, 1487, 1500, 1699, 1712, 2425
Ama87I CYCGRG 1 cut(s) 2346
Aor13HI TCCGGA 2 cut(s) 234, 1495
AoxI GGCC 4 cut(s) 109, 1232, 1434, 2343
ApeKI GCWGC 8 cut(s) 221, 401, 434, 593, 812, 815, 1076, 1870
ApoI RAATTY 7 cut(s) 210, 1103, 1135, 1401, 2230, 2386, 2495
AseI ATTAAT 1 cut(s) 1611
AsiGI ACCGGT 1 cut(s) 2438
Asp700I GAANNNNTTC 3 cut(s) 1425, 1511, 1758
AspLEI GCGC 3 cut(s) 661, 792, 1632
AspS9I GGNCC 5 cut(s) 110, 262, 375, 1435, 2344
AsuC2I CCSGG 1 cut(s) 2490
AvaI CYCGRG 1 cut(s) 2346
AvaII GGWCC 2 cut(s) 262, 375
AxyI CCTNAGG 2 cut(s) 1431, 1781
BaeI ACNNNNGTAYC 2 cut(s) 744, 777
BamHI GGATCC 2 cut(s) 1492, 1704
BauI CACGAG 1 cut(s) 473
BbsI GAAGAC 3 cut(s) 51, 78, 2474
Bbv12I GWGCWC 1 cut(s) 2113
BbvI GCAGC 8 cut(s) 208, 388, 421, 580, 799, 802, 1063, 1882
BccI CCATC 8 cut(s) 101, 158, 619, 733, 1272, 1632, 2172, 2345
BceAI ACGGC 1 cut(s) 1397
BcgI CGANNNNNNTGC 2 cut(s) 413, 447
BciT130I CCWGG 2 cut(s) 373, 1700
BcnI CCSGG 1 cut(s) 2490
BcoDI GTCTC 4 cut(s) 59, 313, 1143, 1574
BfaI CTAG 2 cut(s) 327, 1176
BfmI CTRYAG 3 cut(s) 642, 756, 1077
BfuAI ACCTGC 3 cut(s) 833, 944, 1914
BglI GCCNNNNNGGC 2 cut(s) 2020, 2342
BlpI GCTNAGC 1 cut(s) 2136
BmcAI AGTACT 1 cut(s) 865
Bme1390I CCNGG 3 cut(s) 373, 1700, 2490
Bme18I GGWCC 2 cut(s) 262, 375
BmeRI GACNNNNNGTC 1 cut(s) 688
BmeT110I CYCGRG 1 cut(s) 2346
BmgBI CACGTC 1 cut(s) 1501
BmgT120I GGNCC 5 cut(s) 110, 262, 375, 1435, 2344
BmiI GGNNCC 5 cut(s) 233, 799, 1494, 1706, 2311
BmrFI CCNGG 3 cut(s) 373, 1700, 2490
BmrI ACTGGG 1 cut(s) 1568
BmsI GCATC 7 cut(s) 181, 697, 827, 2261, 2300, 2413, 2463
BmuI ACTGGG 1 cut(s) 1568
BpiI GAAGAC 3 cut(s) 51, 78, 2474
BpmI CTGGAG 1 cut(s) 1739
Bpu1102I GCTNAGC 1 cut(s) 2136
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 1 cut(s) 2490
BsaAI YACGTR 1 cut(s) 445
BsaI GGTCTC 2 cut(s) 313, 1574
BsaJI CCNNGG 4 cut(s) 371, 423, 1699, 2163
BsaWI WCCGGW 3 cut(s) 234, 1495, 2438
BsaXI ACNNNNNCTCC 2 cut(s) 1925, 1955
Bsc4I CCNNNNNNNGG 6 cut(s) 617, 731, 845, 956, 1326, 1970
Bse118I RCCGGY 1 cut(s) 2438
Bse1I ACTGG 3 cut(s) 1302, 1563, 2201
Bse21I CCTNAGG 2 cut(s) 1431, 1781
Bse3DI GCAATG 1 cut(s) 564
BseAI TCCGGA 2 cut(s) 234, 1495
BseBI CCWGG 2 cut(s) 373, 1700
BseDI CCNNGG 4 cut(s) 371, 423, 1699, 2163
BseGI GGATG 6 cut(s) 196, 946, 1120, 1192, 1399, 2194
BseLI CCNNNNNNNGG 6 cut(s) 617, 731, 845, 956, 1326, 1970
BseMI GCAATG 1 cut(s) 564
BseMII CTCAG 7 cut(s) 476, 836, 1772, 1950, 2127, 2148, 2292
BseNI ACTGG 3 cut(s) 1302, 1563, 2201
BseRI GAGGAG 2 cut(s) 77, 997
BseXI GCAGC 8 cut(s) 208, 388, 421, 580, 799, 802, 1063, 1882
BseYI CCCAGC 1 cut(s) 2287
BsgI GTGCAG 1 cut(s) 207
BshFI GGCC 4 cut(s) 111, 1234, 1436, 2345
BshTI ACCGGT 1 cut(s) 2438
BsiHKAI GWGCWC 1 cut(s) 2113
BsiHKCI CYCGRG 1 cut(s) 2346
BsiSI CCGG 5 cut(s) 235, 1496, 2439, 2463, 2489
BslFI GGGAC 2 cut(s) 181, 1991
BslI CCNNNNNNNGG 6 cut(s) 617, 731, 845, 956, 1326, 1970
BsmAI GTCTC 4 cut(s) 59, 313, 1143, 1574
BsmFI GGGAC 2 cut(s) 181, 1991
BsmI GAATGC 2 cut(s) 1072, 1729
BsnI GGCC 4 cut(s) 111, 1234, 1436, 2345
Bso31I GGTCTC 2 cut(s) 313, 1574
BsoBI CYCGRG 1 cut(s) 2346
Bsp1286I GDGCHC 1 cut(s) 2113
Bsp13I TCCGGA 2 cut(s) 234, 1495
Bsp1720I GCTNAGC 1 cut(s) 2136
BspACI CCGC 4 cut(s) 347, 1049, 1235, 2015
BspANI GGCC 4 cut(s) 111, 1234, 1436, 2345
BspCNI CTCAG 7 cut(s) 475, 835, 1773, 1951, 2128, 2149, 2293
BspEI TCCGGA 2 cut(s) 234, 1495
BspHI TCATGA 1 cut(s) 1894
BspLI GGNNCC 5 cut(s) 233, 799, 1494, 1706, 2311
BspMAI CTGCAG 1 cut(s) 1081
BspMI ACCTGC 3 cut(s) 833, 944, 1914
BspPI GGATC 9 cut(s) 688, 885, 1079, 1294, 1487, 1500, 1699, 1712, 2425
BspTNI GGTCTC 2 cut(s) 313, 1574
BsrDI GCAATG 1 cut(s) 564
BsrFI RCCGGY 1 cut(s) 2438
BsrI ACTGG 3 cut(s) 1302, 1563, 2201
BssAI RCCGGY 1 cut(s) 2438
BssECI CCNNGG 4 cut(s) 371, 423, 1699, 2163
BssSI CACGAG 1 cut(s) 473
BssT1I CCWWGG 1 cut(s) 2163
Bst2BI CACGAG 1 cut(s) 473
Bst2UI CCWGG 2 cut(s) 373, 1700
Bst4CI ACNGT 8 cut(s) 184, 629, 760, 892, 1276, 1982, 2032, 2375
Bst6I CTCTTC 2 cut(s) 280, 928
BstAPI GCANNNNNTGC 2 cut(s) 892, 1076
BstBAI YACGTR 1 cut(s) 445
BstC8I GCNNGC 5 cut(s) 663, 1127, 1239, 1688, 2343
BstDEI CTNAG 8 cut(s) 462, 822, 1431, 1781, 1959, 2136, 2157, 2301
BstF5I GGATG 6 cut(s) 196, 946, 1120, 1192, 1399, 2194
BstHHI GCGC 3 cut(s) 661, 792, 1632
BstMAI GTCTC 4 cut(s) 59, 313, 1143, 1574
BstMWI GCNNNNNNNGC 8 cut(s) 892, 1049, 1055, 1076, 1915, 2020, 2342, 2361
BstNI CCWGG 2 cut(s) 373, 1700
BstNSI RCATGY 2 cut(s) 1690, 1858
BstSCI CCNGG 3 cut(s) 371, 1698, 2488
BstSFI CTRYAG 3 cut(s) 642, 756, 1077
BstV1I GCAGC 8 cut(s) 208, 388, 421, 580, 799, 802, 1063, 1882
BstV2I GAAGAC 3 cut(s) 51, 78, 2474
BstX2I RGATCY 5 cut(s) 877, 1084, 1286, 1492, 1704
BstXI CCANNNNNNTGG 1 cut(s) 1551
BstYI RGATCY 5 cut(s) 877, 1084, 1286, 1492, 1704
Bsu36I CCTNAGG 2 cut(s) 1431, 1781
BsuRI GGCC 4 cut(s) 111, 1234, 1436, 2345
BtgZI GCGATG 3 cut(s) 1146, 1367, 2191
BtrI CACGTC 1 cut(s) 1501
BtsCI GGATG 6 cut(s) 196, 946, 1120, 1192, 1399, 2194
BtsIMutI CAGTG 3 cut(s) 897, 2208, 2380
BveI ACCTGC 3 cut(s) 833, 944, 1914
Cac8I GCNNGC 5 cut(s) 663, 1127, 1239, 1688, 2343
CciI TCATGA 1 cut(s) 1894
CfoI GCGC 3 cut(s) 661, 792, 1632
Cfr10I RCCGGY 1 cut(s) 2438
Cfr13I GGNCC 5 cut(s) 110, 262, 375, 1435, 2344
CseI GACGC 1 cut(s) 1049
Csp6I GTAC 6 cut(s) 121, 341, 864, 1272, 1621, 1942
CspAI ACCGGT 1 cut(s) 2438
CviQI GTAC 6 cut(s) 121, 341, 864, 1272, 1621, 1942
DdeI CTNAG 8 cut(s) 462, 822, 1431, 1781, 1959, 2136, 2157, 2301
DraI TTTAAA 1 cut(s) 1819
DriI GACNNNNNGTC 1 cut(s) 688
Eam1104I CTCTTC 2 cut(s) 280, 928
Eam1105I GACNNNNNGTC 1 cut(s) 688
EarI CTCTTC 2 cut(s) 280, 928
Eco130I CCWWGG 1 cut(s) 2163
Eco31I GGTCTC 2 cut(s) 313, 1574
Eco47I GGWCC 2 cut(s) 262, 375
Eco57I CTGAAG 1 cut(s) 2192
Eco81I CCTNAGG 2 cut(s) 1431, 1781
Eco88I CYCGRG 1 cut(s) 2346
EcoO109I RGGNCCY 1 cut(s) 262
EcoRI GAATTC 2 cut(s) 2230, 2495
EcoRII CCWGG 2 cut(s) 371, 1698
EcoT14I CCWWGG 1 cut(s) 2163
EcoT22I ATGCAT 3 cut(s) 712, 718, 2254
ErhI CCWWGG 1 cut(s) 2163
FaqI GGGAC 2 cut(s) 181, 1991
FauNDI CATATG 4 cut(s) 712, 828, 931, 1966
FokI GGATG 6 cut(s) 203, 933, 1127, 1199, 1406, 2201
FspBI CTAG 2 cut(s) 327, 1176
GlaI GCGC 3 cut(s) 660, 791, 1631
GsaI CCCAGC 1 cut(s) 2291
GsuI CTGGAG 1 cut(s) 1739
HaeIII GGCC 4 cut(s) 111, 1234, 1436, 2345
HapII CCGG 5 cut(s) 235, 1496, 2439, 2463, 2489
HgaI GACGC 1 cut(s) 1049
HhaI GCGC 3 cut(s) 661, 792, 1632
Hin6I GCGC 3 cut(s) 659, 790, 1630
HinP1I GCGC 3 cut(s) 659, 790, 1630
HincII GTYRAC 2 cut(s) 805, 2035
HindII GTYRAC 2 cut(s) 805, 2035
HindIII AAGCTT 2 cut(s) 1023, 1509
HinfI GANTC 8 cut(s) 32, 488, 689, 908, 1151, 1714, 2100, 2159
HpaI GTTAAC 2 cut(s) 805, 2035
HpaII CCGG 5 cut(s) 235, 1496, 2439, 2463, 2489
Hpy166II GTNNAC 6 cut(s) 368, 805, 848, 1006, 2035, 2206
Hpy188III TCNNGA 8 cut(s) 140, 235, 1088, 1213, 1496, 1595, 1718, 1895
Hpy8I GTNNAC 6 cut(s) 368, 805, 848, 1006, 2035, 2206
HpyAV CCTTC 4 cut(s) 253, 302, 1351, 2300
HpyCH4III ACNGT 8 cut(s) 184, 629, 760, 892, 1276, 1982, 2032, 2375
HpyCH4IV ACGT 6 cut(s) 95, 444, 1008, 1444, 1500, 1693
HpyF10VI GCNNNNNNNGC 8 cut(s) 892, 1049, 1055, 1076, 1915, 2020, 2342, 2361
HpyF3I CTNAG 8 cut(s) 462, 822, 1431, 1781, 1959, 2136, 2157, 2301
HpySE526I ACGT 6 cut(s) 95, 444, 1008, 1444, 1500, 1693
HspAI GCGC 3 cut(s) 659, 790, 1630
Kpn2I TCCGGA 2 cut(s) 234, 1495
KspAI GTTAAC 2 cut(s) 805, 2035
LmnI GCTCC 3 cut(s) 101, 772, 1867
Lsp1109I GCAGC 8 cut(s) 208, 388, 421, 580, 799, 802, 1063, 1882
LweI GCATC 7 cut(s) 181, 697, 827, 2261, 2300, 2413, 2463
MaeI CTAG 2 cut(s) 327, 1176
MaeII ACGT 6 cut(s) 95, 444, 1008, 1444, 1500, 1693
MaeIII GTNAC 4 cut(s) 5, 1037, 2151, 2399
MfeI CAATTG 2 cut(s) 552, 1053
MflI RGATCY 5 cut(s) 877, 1084, 1286, 1492, 1704
MhlI GDGCHC 1 cut(s) 2113
MlyI GAGTC 6 cut(s) 41, 497, 698, 902, 1145, 2168
MmeI TCCRAC 3 cut(s) 649, 2073, 2395
Mph1103I ATGCAT 3 cut(s) 712, 718, 2254
MroI TCCGGA 2 cut(s) 234, 1495
MroXI GAANNNNTTC 3 cut(s) 1425, 1511, 1758
MseI TTAA 8 cut(s) 752, 804, 977, 1488, 1611, 1656, 1818, 2034
MspI CCGG 5 cut(s) 235, 1496, 2439, 2463, 2489
MspR9I CCNGG 3 cut(s) 373, 1700, 2490
MunI CAATTG 2 cut(s) 552, 1053
Mva1269I GAATGC 2 cut(s) 1072, 1729
MvaI CCWGG 2 cut(s) 373, 1700
MwoI GCNNNNNNNGC 8 cut(s) 892, 1049, 1055, 1076, 1915, 2020, 2342, 2361
NciI CCSGG 1 cut(s) 2490
NdeI CATATG 4 cut(s) 712, 828, 931, 1966
NlaIV GGNNCC 5 cut(s) 233, 799, 1494, 1706, 2311
NmuCI GTSAC 2 cut(s) 1037, 2399
NsiI ATGCAT 3 cut(s) 712, 718, 2254
NspI RCATGY 2 cut(s) 1690, 1858
PaeI GCATGC 1 cut(s) 1690
PagI TCATGA 1 cut(s) 1894
PaqCI CACCTGC 2 cut(s) 833, 944
PctI GAATGC 2 cut(s) 1072, 1729
PdmI GAANNNNTTC 3 cut(s) 1425, 1511, 1758
PfeI GAWTC 2 cut(s) 1714, 2100
PflFI GACNNNGTC 1 cut(s) 1443
PflMI CCANNNNNTGG 4 cut(s) 617, 731, 845, 956
PinAI ACCGGT 1 cut(s) 2438
PleI GAGTC 6 cut(s) 40, 496, 697, 902, 1145, 2167
PpsI GAGTC 6 cut(s) 40, 496, 697, 902, 1145, 2167
Ppu21I YACGTR 1 cut(s) 445
PpuMI RGGWCCY 1 cut(s) 262
PshBI ATTAAT 1 cut(s) 1611
Psp1406I AACGTT 1 cut(s) 1693
Psp5II RGGWCCY 1 cut(s) 262
Psp6I CCWGG 2 cut(s) 371, 1698
PspFI CCCAGC 1 cut(s) 2287
PspGI CCWGG 2 cut(s) 371, 1698
PspN4I GGNNCC 5 cut(s) 233, 799, 1494, 1706, 2311
PspPI GGNCC 5 cut(s) 110, 262, 375, 1435, 2344
PspPPI RGGWCCY 1 cut(s) 262
PstI CTGCAG 1 cut(s) 1081
PsuI RGATCY 5 cut(s) 877, 1084, 1286, 1492, 1704
PsyI GACNNNGTC 1 cut(s) 1443
RsaI GTAC 6 cut(s) 122, 342, 865, 1273, 1622, 1943
RsaNI GTAC 6 cut(s) 121, 341, 864, 1272, 1621, 1942
SaqAI TTAA 8 cut(s) 752, 804, 977, 1488, 1611, 1656, 1818, 2034
Sau96I GGNCC 5 cut(s) 110, 262, 375, 1435, 2344
ScaI AGTACT 1 cut(s) 865
SchI GAGTC 6 cut(s) 41, 497, 698, 902, 1145, 2168
ScrFI CCNGG 3 cut(s) 373, 1700, 2490
SduI GDGCHC 1 cut(s) 2113
SfaNI GCATC 7 cut(s) 181, 697, 827, 2261, 2300, 2413, 2463
SfcI CTRYAG 3 cut(s) 642, 756, 1077
SinI GGWCC 2 cut(s) 262, 375
SmlI CTYRAG 1 cut(s) 152
SmoI CTYRAG 1 cut(s) 152
SphI GCATGC 1 cut(s) 1690
SsiI CCGC 4 cut(s) 347, 1049, 1235, 2015
SspI AATATT 2 cut(s) 452, 1798
SspMI CTAG 2 cut(s) 327, 1176
StyD4I CCNGG 3 cut(s) 371, 1698, 2488
StyI CCWWGG 1 cut(s) 2163
TaaI ACNGT 8 cut(s) 184, 629, 760, 892, 1276, 1982, 2032, 2375
TaiI ACGT 6 cut(s) 98, 447, 1011, 1447, 1503, 1696
TaqI TCGA 4 cut(s) 177, 692, 972, 1200
TatI WGTACW 3 cut(s) 120, 863, 1941
TauI GCSGC 4 cut(s) 350, 1052, 1237, 2017
TfiI GAWTC 2 cut(s) 1714, 2100
Tru1I TTAA 8 cut(s) 752, 804, 977, 1488, 1611, 1656, 1818, 2034
Tru9I TTAA 8 cut(s) 752, 804, 977, 1488, 1611, 1656, 1818, 2034
TscAI CASTG 3 cut(s) 897, 2208, 2380
TseFI GTSAC 2 cut(s) 1037, 2399
TseI GCWGC 8 cut(s) 221, 401, 434, 593, 812, 815, 1076, 1870
Tsp45I GTSAC 2 cut(s) 1037, 2399
TspGWI ACGGA 2 cut(s) 790, 2112
TspRI CASTG 3 cut(s) 897, 2208, 2380
Tth111I GACNNNGTC 1 cut(s) 1443
Van91I CCANNNNNTGG 4 cut(s) 617, 731, 845, 956
VpaK11BI GGWCC 2 cut(s) 262, 375
VspI ATTAAT 1 cut(s) 1611
XapI RAATTY 7 cut(s) 210, 1103, 1135, 1401, 2230, 2386, 2495
XceI RCATGY 2 cut(s) 1690, 1858
XcmI CCANNNNNNNNNTGG 3 cut(s) 1548, 2372, 2411
XmnI GAANNNNTTC 3 cut(s) 1425, 1511, 1758
XspI CTAG 2 cut(s) 327, 1176
ZrmI AGTACT 1 cut(s) 865
Zsp2I ATGCAT 3 cut(s) 712, 718, 2254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.