Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0016744

Physical Location & Seq

Genomic Coordinates Forward (+)

66645804 .. 66649604

Gene Structure 3801 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015482

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGAGTAATGATGGGAATATCATTGATGTTGAGTCGGGGGAAGAAGATGATTCTTCAGTGCAAGATTGCAACATGGAGACAGAAGACATTGAAACCACTGAAGAAACATATGGAGCAGATGGCCCGTTTGAGTACAATGGGAAAAATTTTCGTGAGCTGACGGTCAAGGACTTTGATGGGACTTATTTCAAAACTATTGATGATGCTGAAAAGTTTTATGAAATTTATTCTGCTGCACTTGGGTTCCGTTTAAGGAGACAAAAGTGTGACCGGGGCCTGTCTGGCACTGTCCTAAGAAGAGTGTGGGTGTGTTCCAAACAAGGTCAAAAGAACAAACCTAGAAATAATCAAGTAAGGGGGCTTTCGAGCAATAGTCGTCCGCCCAGGCACAGCACGAGAGAGAAATGTATGGCTGCATTTGTTGTGCGGTATTCCAAGGAACTTGATGCATATTATGTGAAAAGTTTTACTACTGAGCACACCCATGACTTACCAAAGCCTAACAAGGTGCAATCGCTTCTTTCTCATTGTGTTGGCAAGAAAGTGGATTTGGCAGAGGCAGTTGCAATGCCCAAAGCCAAAGAGTCAATCAAAACCTCTGCTGCACATGAGCATCACCCATCAGGTGGAAATGAGTGTGTTGCTTCTACTAAAGAATTGGATTTGGCACACGCAGTTGCAGTACGCAAAGCCAAAGAGTCAATCAACACCTCTGCTGCATATGTGTATCGCCCGTCAGGTGGAAATGAGTTTGTGGGTTTAACTAAAGAATCGGATTTGGAGCAGGGAGTTGCAATGCGTAAAGGTTCAATCAACTCCACTGCTGCATCTCAGCACATGGTTGAACCAGCAGGTGGACATGCGTTTGTTAGTTTAACTAATAGATCGGATTTGGAGCAGGGAGTTGCAATGGGCAAAGGTTCAGTCAACTCTGCTGCCGCATCTCAGCATATGGTTGAACCAGCAGGTAAGTATGACAGGTTTTGTGAATATATTCCCCGGATGGACAAGACCCTGAGGAAAATGAGAAATAATATTAGTGTGGATGACCTTAAATGCGAGAACTCAAAGCCAGTCATTATCACTCACATGCGGTCTTTGGAGCAGCAGATAGCTGAGATCTTCACTCATGACATCTACTTGCTGATAATGCACCAGATAGATTGGGAGAGAAAATACATAATCACCAAGTCTGAGCCATATGCACAAGGGGACGGTAAAGTGTTTCACCTGACCCAATATGACTTGCCACACAGGCATTGGACTGTTAATTACCACCATAATATAAGCAAAGTGTGGTTCTTGTGTTCATGCAAACTATTTCAGTCAGACGGAATCCCTTGTGCCCATATATTTTCAGTAATGAAAGCTGAGCTGATATTGAAGTTACCTGATTCCTTGGTTCTGAAGCGATGGACAATGGATGTGGGGAAGCCGGTGAACTTGCATAATTTGTCGGACAGGAATTTGCAAATGGTAAGGTATGCATCCTTGGCTTCAGAAATCAAAAATATATGTTTCCCAGCATCTATGACTGAAGGAGGAACCAAGAAGATGAAATGTGAAATTGCAAAGCTGGCCAAGCCGGCCCATGATCGCACGGAGAGCCAAAACCACAGTTTATTGCAGAATTTGATACATCGTCACCAACTTCATGTTGGATCAGACGCCCACAGCTTCACCGGTTTTTCAGTTGGCATCAATGCCGAACATTACGCTCGCAGTCTTCCTCCGGACATTTTTCTTTCCGCTCTGATTTCTGCTATAAGCTCGTGCTCTTCTGTCTCATATGGCCGTGCCATTCACGCATGTGTAATCAAGTCTTACAATTACAGTGATGGGTTCATTGGCGATCAGCTGGTTTCGTGTTATGTTAAGATGGTTTCTGCTGAAGATGCACTGAACTTGTTCGATGAAATGCCCAAGAAGGACTTGGTCTCCCGGAATTCTTTGATTTCCGGGTTTTCGCCAAGAGGGTATGTGGATAAACGCTTGACTGCGTTTCTTGGGATGAGGTTTGAAATGGGAATAGAACCCAATGAGGTTACGCTTATATCTGTAGTTTCAGCTTGTGCTATCAGTGGAGCTGTTGATGAAGGTATTTACATTCATGGATTTGCACTGAAATTGGGTGTGCTGTGGGAACCAAAGCTTGTTAATTCTCTGATTAATCTGTATGGAAAGTCAGGCTATTTGGATGCAGTTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

737

Amino Acids

82.06

Weight (kDa)

7.36

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	71 - 164	5.2e-14	FAR1 DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016744)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g00731
rosa_chinensis	RchiOBHm_Chr6g0251121
rosa_laevigata	RLG00000015482
rosa_multiflora	Rmu_co7984096.1_g000001 Rmu_sc0002219.1_g000011 Rmu_sc0002219.1_g000018 Rmu_sc0011355.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217020
rosa_samantha	Rh6AG008800 Rh6AG009300 Rh6BG002500 Rh6CG006200 Rh6DG006500
rosa_wichuraiana	Rw6G000940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	842
Acc36I	ACCTGC	2 cut(s)	842, 956
AccB7I	CCANNNNNTGG	2 cut(s)	626, 854
AccBSI	CCGCTC	1 cut(s)	1751
AccIII	TCCGGA	1 cut(s)	1732
AciI	CCGC	5 cut(s)	380, 427, 939, 1093, 1749
AclWI	GGATC	1 cut(s)	1669
AcoI	YGGCCR	2 cut(s)	1578, 1792
AcsI	RAATTY	5 cut(s)	145, 222, 1465, 1630, 1945
AcuI	CTGAAG	6 cut(s)	39, 120, 1427, 1482, 1557, 1911
AcyI	GRCGYC	1 cut(s)	1668
AfaI	GTAC	2 cut(s)	134, 684
AfiI	CCNNNNNNNGG	3 cut(s)	626, 740, 854
AgeI	ACCGGT	1 cut(s)	1682
AgsI	TTSAA	7 cut(s)	92, 190, 810, 845, 959, 1384, 2021
AjnI	CCWGG	1 cut(s)	383
AjuI	GAANNNNNNNTTGG	2 cut(s)	533, 565
AleI	CACNNNNGTG	1 cut(s)	1809
Alw21I	GWGCWC	2 cut(s)	480, 1778
Alw26I	GTCTC	4 cut(s)	71, 250, 1789, 1942
AlwI	GGATC	1 cut(s)	1669
Aor13HI	TCCGGA	1 cut(s)	1732
AoxI	GGCC	5 cut(s)	121, 274, 1578, 1587, 1792
ApeKI	GCWGC	7 cut(s)	233, 413, 602, 716, 824, 935, 1105
ApoI	RAATTY	5 cut(s)	145, 222, 1465, 1630, 1945
ArsI	GACNNNNNNTTYG	2 cut(s)	909, 941
AseI	ATTAAT	1 cut(s)	2169
AsiGI	ACCGGT	1 cut(s)	1682
Asp700I	GAANNNNTTC	2 cut(s)	993, 1907
AspS9I	GGNCC	3 cut(s)	122, 274, 1588
AsuC2I	CCSGG	4 cut(s)	272, 1000, 1942, 1960
AsuHPI	GGTGA	6 cut(s)	608, 1177, 1220, 1450, 1637, 1672
AxyI	CCTNAGG	1 cut(s)	1016
BaeGI	GKGCMC	1 cut(s)	1348
BalI	TGGCCA	1 cut(s)	1580
BauI	CACGAG	2 cut(s)	394, 1771
BbsI	GAAGAC	2 cut(s)	90, 1718
Bbv12I	GWGCWC	2 cut(s)	480, 1778
BbvI	GCAGC	7 cut(s)	220, 400, 589, 703, 811, 922, 1117
BccI	CCATC	8 cut(s)	5, 113, 170, 628, 997, 1407, 1832, 1873
BceAI	ACGGC	1 cut(s)	1779
BciT130I	CCWGG	1 cut(s)	385
BcnI	CCSGG	4 cut(s)	272, 1000, 1942, 1960
BcoDI	GTCTC	4 cut(s)	71, 250, 1789, 1942
BfaI	CTAG	1 cut(s)	339
BfmI	CTRYAG	1 cut(s)	2058
BfuAI	ACCTGC	2 cut(s)	842, 956
BglI	GCCNNNNNGGC	3 cut(s)	282, 1255, 1586
BglII	AGATCT	1 cut(s)	1119
BisI	GCNGC	8 cut(s)	234, 414, 603, 717, 825, 936, 939, 1106
BlpI	GCTNAGC	1 cut(s)	1371
BlsI	GCNGC	8 cut(s)	235, 415, 604, 718, 826, 937, 940, 1107
Bme1390I	CCNGG	5 cut(s)	272, 385, 1000, 1942, 1960
BmgT120I	GGNCC	3 cut(s)	122, 274, 1588
BmiI	GGNNCC	4 cut(s)	245, 275, 1546, 2145
BmrFI	CCNGG	5 cut(s)	272, 385, 1000, 1942, 1960
BpiI	GAAGAC	2 cut(s)	90, 1718
Bpu1102I	GCTNAGC	1 cut(s)	1371
BpuMI	CCSGG	4 cut(s)	272, 1000, 1942, 1960
BsaHI	GRCGYC	1 cut(s)	1668
BsaI	GGTCTC	1 cut(s)	1942
BsaJI	CCNNGG	6 cut(s)	271, 383, 435, 998, 1398, 1491
BsaWI	WCCGGW	2 cut(s)	1682, 1732
BsaXI	ACNNNNNCTCC	2 cut(s)	1922, 1952
Bsc4I	CCNNNNNNNGG	3 cut(s)	626, 740, 854
Bse118I	RCCGGY	3 cut(s)	1435, 1585, 1682
Bse1I	ACTGG	1 cut(s)	1073
Bse21I	CCTNAGG	1 cut(s)	1016
Bse3DI	GCAATG	3 cut(s)	573, 801, 915
BseAI	TCCGGA	1 cut(s)	1732
BseBI	CCWGG	1 cut(s)	385
BseDI	CCNNGG	6 cut(s)	271, 383, 435, 998, 1398, 1491
BseGI	GGATG	6 cut(s)	1008, 1051, 1429, 1487, 2016, 2203
BseLI	CCNNNNNNNGG	3 cut(s)	626, 740, 854
BseMI	GCAATG	3 cut(s)	573, 801, 915
BseMII	CTCAG	7 cut(s)	465, 845, 959, 1007, 1107, 1185, 1362
BseNI	ACTGG	1 cut(s)	1073
BseSI	GKGCMC	1 cut(s)	1348
BseXI	GCAGC	7 cut(s)	220, 400, 589, 703, 811, 922, 1117
BseYI	CCCAGC	1 cut(s)	1522
BsgI	GTGCAG	2 cut(s)	219, 588
BshFI	GGCC	5 cut(s)	123, 276, 1580, 1589, 1794
BshTI	ACCGGT	1 cut(s)	1682
BsiHKAI	GWGCWC	2 cut(s)	480, 1778
BsiSI	CCGG	8 cut(s)	271, 1000, 1436, 1586, 1683, 1733, 1942, 1959
BslFI	GGGAC	2 cut(s)	193, 1226
BslI	CCNNNNNNNGG	3 cut(s)	626, 740, 854
BsmAI	GTCTC	4 cut(s)	71, 250, 1789, 1942
BsmFI	GGGAC	2 cut(s)	193, 1226
BsnI	GGCC	5 cut(s)	123, 276, 1580, 1589, 1794
Bso31I	GGTCTC	1 cut(s)	1942
Bsp1286I	GDGCHC	3 cut(s)	480, 1348, 1778
Bsp13I	TCCGGA	1 cut(s)	1732
Bsp143I	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
Bsp1720I	GCTNAGC	1 cut(s)	1371
BspACI	CCGC	5 cut(s)	380, 427, 939, 1093, 1749
BspANI	GGCC	5 cut(s)	123, 276, 1580, 1589, 1794
BspCNI	CTCAG	7 cut(s)	466, 844, 958, 1008, 1108, 1186, 1363
BspEI	TCCGGA	1 cut(s)	1732
BspHI	TCATGA	1 cut(s)	1129
BspLI	GGNNCC	4 cut(s)	245, 275, 1546, 2145
BspMI	ACCTGC	2 cut(s)	842, 956
BspPI	GGATC	1 cut(s)	1669
BspQI	GCTCTTC	1 cut(s)	1783
BspTNI	GGTCTC	1 cut(s)	1942
BsrBI	CCGCTC	1 cut(s)	1751
BsrDI	GCAATG	3 cut(s)	573, 801, 915
BsrFI	RCCGGY	3 cut(s)	1435, 1585, 1682
BsrI	ACTGG	1 cut(s)	1073
BssAI	RCCGGY	3 cut(s)	1435, 1585, 1682
BssECI	CCNNGG	6 cut(s)	271, 383, 435, 998, 1398, 1491
BssMI	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
BssNI	GRCGYC	1 cut(s)	1668
BssSI	CACGAG	2 cut(s)	394, 1771
BssT1I	CCWWGG	3 cut(s)	435, 1398, 1491
Bst2BI	CACGAG	2 cut(s)	394, 1771
Bst2UI	CCWGG	1 cut(s)	385
Bst4CI	ACNGT	6 cut(s)	163, 289, 1217, 1267, 1619, 1835
Bst6I	CTCTTC	2 cut(s)	292, 1783
BstACI	GRCGYC	1 cut(s)	1668
BstC8I	GCNNGC	3 cut(s)	1578, 1587, 1720
BstDEI	CTNAG	8 cut(s)	293, 474, 831, 945, 1016, 1116, 1194, 1371
BstF5I	GGATG	6 cut(s)	1008, 1051, 1429, 1487, 2016, 2203
BstKTI	GATC	5 cut(s)	887, 1122, 1597, 1664, 1855
BstMAI	GTCTC	4 cut(s)	71, 250, 1789, 1942
BstMBI	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
BstNI	CCWGG	1 cut(s)	385
BstNSI	RCATGY	3 cut(s)	863, 1093, 1812
BstSCI	CCNGG	5 cut(s)	270, 383, 998, 1940, 1958
BstSFI	CTRYAG	1 cut(s)	2058
BstSLI	GKGCMC	1 cut(s)	1348
BstV1I	GCAGC	7 cut(s)	220, 400, 589, 703, 811, 922, 1117
BstV2I	GAAGAC	2 cut(s)	90, 1718
BstX2I	RGATCY	1 cut(s)	1119
BstYI	RGATCY	1 cut(s)	1119
Bsu36I	CCTNAGG	1 cut(s)	1016
BsuRI	GGCC	5 cut(s)	123, 276, 1580, 1589, 1794
BtgZI	GCGATG	1 cut(s)	1426
BtsCI	GGATG	6 cut(s)	1008, 1051, 1429, 1487, 2016, 2203
BtsI	GCAGTG	1 cut(s)	819
BtsIMutI	CAGTG	8 cut(s)	63, 96, 285, 819, 1840, 1898, 2086, 2120
BveI	ACCTGC	2 cut(s)	842, 956
Cac8I	GCNNGC	3 cut(s)	1578, 1587, 1720
CciI	TCATGA	1 cut(s)	1129
Cfr10I	RCCGGY	3 cut(s)	1435, 1585, 1682
Cfr13I	GGNCC	3 cut(s)	122, 274, 1588
CseI	GACGC	1 cut(s)	1676
Csp6I	GTAC	2 cut(s)	133, 683
CspAI	ACCGGT	1 cut(s)	1682
CspCI	CAANNNNNGTGG	2 cut(s)	1407, 1442
CviQI	GTAC	2 cut(s)	133, 683
DdeI	CTNAG	8 cut(s)	293, 474, 831, 945, 1016, 1116, 1194, 1371
DpnI	GATC	5 cut(s)	886, 1121, 1596, 1663, 1854
DpnII	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
EaeI	YGGCCR	2 cut(s)	1578, 1792
Eam1104I	CTCTTC	2 cut(s)	292, 1783
EarI	CTCTTC	2 cut(s)	292, 1783
EciI	GGCGGA	1 cut(s)	369
Eco130I	CCWWGG	3 cut(s)	435, 1398, 1491
Eco31I	GGTCTC	1 cut(s)	1942
Eco57I	CTGAAG	6 cut(s)	39, 120, 1427, 1482, 1557, 1911
Eco81I	CCTNAGG	1 cut(s)	1016
EcoO109I	RGGNCCY	1 cut(s)	274
EcoRI	GAATTC	1 cut(s)	1945
EcoRII	CCWGG	1 cut(s)	383
EcoT14I	CCWWGG	3 cut(s)	435, 1398, 1491
EcoT22I	ATGCAT	2 cut(s)	451, 1489
ErhI	CCWWGG	3 cut(s)	435, 1398, 1491
FalI	AAGNNNNNCTT	2 cut(s)	1916, 1948
FaqI	GGGAC	2 cut(s)	193, 1226
FauNDI	CATATG	5 cut(s)	109, 721, 951, 1201, 1789
Fnu4HI	GCNGC	8 cut(s)	234, 414, 603, 717, 825, 936, 939, 1106
FokI	GGATG	5 cut(s)	1015, 1058, 1436, 1474, 2023
Fsp4HI	GCNGC	8 cut(s)	234, 414, 603, 717, 825, 936, 939, 1106
FspBI	CTAG	1 cut(s)	339
GluI	GCNGC	8 cut(s)	234, 414, 603, 717, 825, 936, 939, 1106
GsaI	CCCAGC	1 cut(s)	1526
HaeIII	GGCC	5 cut(s)	123, 276, 1580, 1589, 1794
HapII	CCGG	8 cut(s)	271, 1000, 1436, 1586, 1683, 1733, 1942, 1959
HgaI	GACGC	1 cut(s)	1676
Hin1I	GRCGYC	1 cut(s)	1668
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HindIII	AAGCTT	1 cut(s)	2150
HinfI	GANTC	7 cut(s)	32, 50, 584, 698, 770, 1335, 1394
HpaII	CCGG	8 cut(s)	271, 1000, 1436, 1586, 1683, 1733, 1942, 1959
HphI	GGTGA	6 cut(s)	608, 1177, 1220, 1450, 1637, 1672
Hpy166II	GTNNAC	3 cut(s)	857, 928, 1441
Hpy188III	TCNNGA	3 cut(s)	152, 1130, 1733
Hpy8I	GTNNAC	3 cut(s)	857, 928, 1441
HpyAV	CCTTC	3 cut(s)	1532, 1921, 2090
HpyCH4III	ACNGT	6 cut(s)	163, 289, 1217, 1267, 1619, 1835
HpyF3I	CTNAG	8 cut(s)	293, 474, 831, 945, 1016, 1116, 1194, 1371
Hsp92I	GRCGYC	1 cut(s)	1668
Kpn2I	TCCGGA	1 cut(s)	1732
KroI	GCCGGC	1 cut(s)	1585
KroNI	GCCGGC	1 cut(s)	1587
Kzo9I	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
LguI	GCTCTTC	1 cut(s)	1783
LmnI	GCTCC	5 cut(s)	113, 781, 895, 1102, 2084
Lsp1109I	GCAGC	7 cut(s)	220, 400, 589, 703, 811, 922, 1117
MaeI	CTAG	1 cut(s)	339
MaeIII	GTNAC	4 cut(s)	266, 1386, 1643, 2044
MalI	GATC	5 cut(s)	886, 1121, 1596, 1663, 1854
MbiI	CCGCTC	1 cut(s)	1751
MboI	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
MflI	RGATCY	1 cut(s)	1119
MhlI	GDGCHC	3 cut(s)	480, 1348, 1778
MlsI	TGGCCA	1 cut(s)	1580
MluNI	TGGCCA	1 cut(s)	1580
MlyI	GAGTC	3 cut(s)	41, 593, 707
MmeI	TCCRAC	2 cut(s)	1437, 1639
MnlI	CCTC	9 cut(s)	550, 607, 721, 1011, 1535, 1740, 1967, 2007, 2035
Mox20I	TGGCCA	1 cut(s)	1580
Mph1103I	ATGCAT	2 cut(s)	451, 1489
MroI	TCCGGA	1 cut(s)	1732
MroNI	GCCGGC	1 cut(s)	1585
MroXI	GAANNNNTTC	2 cut(s)	993, 1907
MscI	TGGCCA	1 cut(s)	1580
MseI	TTAA	8 cut(s)	251, 761, 875, 1053, 1269, 1875, 2157, 2169
MslI	CAYNNNNRTG	3 cut(s)	483, 1088, 1809
Msp20I	TGGCCA	1 cut(s)	1580
MspA1I	CMGCKG	1 cut(s)	1858
MspI	CCGG	8 cut(s)	271, 1000, 1436, 1586, 1683, 1733, 1942, 1959
MspR9I	CCNGG	5 cut(s)	272, 385, 1000, 1942, 1960
MvaI	CCWGG	1 cut(s)	385
NaeI	GCCGGC	1 cut(s)	1587
NciI	CCSGG	4 cut(s)	272, 1000, 1942, 1960
NdeI	CATATG	5 cut(s)	109, 721, 951, 1201, 1789
NdeII	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
NgoMIV	GCCGGC	1 cut(s)	1585
NlaIV	GGNNCC	4 cut(s)	245, 275, 1546, 2145
NmuCI	GTSAC	2 cut(s)	266, 1643
NsiI	ATGCAT	2 cut(s)	451, 1489
NspI	RCATGY	3 cut(s)	863, 1093, 1812
OliI	CACNNNNGTG	1 cut(s)	1809
PagI	TCATGA	1 cut(s)	1129
PaqCI	CACCTGC	1 cut(s)	842
PciSI	GCTCTTC	1 cut(s)	1783
PdiI	GCCGGC	1 cut(s)	1587
PdmI	GAANNNNTTC	2 cut(s)	993, 1907
PfeI	GAWTC	4 cut(s)	50, 770, 1335, 1394
PflFI	GACNNNGTC	1 cut(s)	1934
PflMI	CCANNNNNTGG	2 cut(s)	626, 854
PfoI	TCCNGGA	1 cut(s)	1940
PinAI	ACCGGT	1 cut(s)	1682
PkrI	GCNGC	8 cut(s)	235, 415, 604, 718, 826, 937, 940, 1107
PleI	GAGTC	3 cut(s)	40, 592, 706
PpsI	GAGTC	3 cut(s)	40, 592, 706
PshBI	ATTAAT	1 cut(s)	2169
Psp6I	CCWGG	1 cut(s)	383
PspFI	CCCAGC	1 cut(s)	1522
PspGI	CCWGG	1 cut(s)	383
PspN4I	GGNNCC	4 cut(s)	245, 275, 1546, 2145
PspPI	GGNCC	3 cut(s)	122, 274, 1588
PsuI	RGATCY	1 cut(s)	1119
PsyI	GACNNNGTC	1 cut(s)	1934
PvuII	CAGCTG	1 cut(s)	1858
RsaI	GTAC	2 cut(s)	134, 684
RsaNI	GTAC	2 cut(s)	133, 683
RseI	CAYNNNNRTG	3 cut(s)	483, 1088, 1809
SapI	GCTCTTC	1 cut(s)	1783
SaqAI	TTAA	8 cut(s)	251, 761, 875, 1053, 1269, 1875, 2157, 2169
SatI	GCNGC	8 cut(s)	234, 414, 603, 717, 825, 936, 939, 1106
Sau3AI	GATC	5 cut(s)	884, 1119, 1594, 1661, 1852
Sau96I	GGNCC	3 cut(s)	122, 274, 1588
SchI	GAGTC	3 cut(s)	41, 593, 707
ScrFI	CCNGG	5 cut(s)	272, 385, 1000, 1942, 1960
SduI	GDGCHC	3 cut(s)	480, 1348, 1778
SfcI	CTRYAG	1 cut(s)	2058
SfiI	GGCCNNNNNGGCC	1 cut(s)	1586
SmiMI	CAYNNNNRTG	3 cut(s)	483, 1088, 1809
SsiI	CCGC	5 cut(s)	380, 427, 939, 1093, 1749
SspI	AATATT	1 cut(s)	1036
SspMI	CTAG	1 cut(s)	339
StyD4I	CCNGG	5 cut(s)	270, 383, 998, 1940, 1958
StyI	CCWWGG	3 cut(s)	435, 1398, 1491
TaaI	ACNGT	6 cut(s)	163, 289, 1217, 1267, 1619, 1835
TaqI	TCGA	2 cut(s)	365, 1911
TatI	WGTACW	1 cut(s)	132
TauI	GCSGC	1 cut(s)	941
TfiI	GAWTC	4 cut(s)	50, 770, 1335, 1394
Tru1I	TTAA	8 cut(s)	251, 761, 875, 1053, 1269, 1875, 2157, 2169
Tru9I	TTAA	8 cut(s)	251, 761, 875, 1053, 1269, 1875, 2157, 2169
TscAI	CASTG	8 cut(s)	63, 103, 292, 826, 1840, 1905, 2086, 2127
TseFI	GTSAC	2 cut(s)	266, 1643
TseI	GCWGC	7 cut(s)	233, 413, 602, 716, 824, 935, 1105
Tsp45I	GTSAC	2 cut(s)	266, 1643
TspDTI	ATGAA	9 cut(s)	234, 1299, 1379, 1571, 1643, 1834, 1929, 2099, 2109
TspGWI	ACGGA	3 cut(s)	236, 1347, 1616
TspRI	CASTG	8 cut(s)	63, 103, 292, 826, 1840, 1905, 2086, 2127
Tth111I	GACNNNGTC	1 cut(s)	1934
Van91I	CCANNNNNTGG	2 cut(s)	626, 854
VspI	ATTAAT	1 cut(s)	2169
XapI	RAATTY	5 cut(s)	145, 222, 1465, 1630, 1945
XceI	RCATGY	3 cut(s)	863, 1093, 1812
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1257, 1655, 1930
XmnI	GAANNNNTTC	2 cut(s)	993, 1907
XspI	CTAG	1 cut(s)	339
Zsp2I	ATGCAT	2 cut(s)	451, 1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.