Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011355.1

Orthogroup ID

OG0016744

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 2938

Gene Structure 2938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011355.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2670 bp

gttggtgtagccatgagtaatgatgggaatatcattgatgttgagtcgggggaagaagatgattcttcagtgcaagattgcaacatggagacagaagacattgaaaccaccgaagaaacatatggagcagatggcccttttgagtacaatgggaaaaattttcgtgagctgacggtcaaggactttgatgggacttatttcaaaactattgatgatgctgaaaagttctatgaaatttattctgctgcacttgggttccgtttaaggagacaaaagtgtgatcggggcctgtctggcactgtcctaagaagaatgtgggtgagttccaaacaaggtcaaaagaacaaacctagaaataatcaagtgagggggctttcgagcaatagtcgtccacccaggcacagcacaagggagaaatgtatggctgcatttgttgtgcggtattccaaggaacttgatgcttattatgtgaaaagttttactactgagcacacccacgacttaccaaagcctaacaaggtgcaatcgcttctttctcattgtgttggcaagaaagtggatttggcagaggcagttgcaatgcccaaagccaaagagtcaatcaaaacctctgttgcacatgagcatcacccatcaggtggaaatgagtgtgttgcttctactaaagaattggatttggcacacgcagttgcagtacgcaaagccaaagagtcaatcaacacctctgctgcatatgtgtatcgccagtcaggtggaaatgagtttgtgggtttaactaaagaatcggatttggagcagggagttgcagtgtgtaaaggttcaatcaactccactgctgcatctcagcacatggttcaaccagcaggtggacatgcgtttgttagtttaactaatagatcggatttggagcagggagttgcaatgggcaaaggttcaatcaactctgccgccgcatctcagcatatggttgaaccagcaggtggacatgcgtttgtgagtttaactaataggtcggatttggtgcagacagtggcaatgcacaaagagtcaatcacaacctctagtgcatatgagtatatagttcatcctgcgggtggatatgagtttgtggatttaatgaagagggagttgtataatagcatggacatagaacgccgagaagctttgttgaatggtgacgcacaagcggcaattgccttcatgaatgcaagagctgcagaggatcccgaatttttttgcaagttcagcgtgggtgagcgaggcaggcttggaaatttgttttggagagattcttgttcactgttggactacactaggtttggggatgtattgatattcgactgtacattcaagacaaacatttaccagaggcccctagctgtctttgttggtgcaaataaccatcggggcactgtattgtttggatctgcaatactggttgatgataccattgatacctacaagtgggctttgcaaacatttttgggtgcgatgaaggacaaaaaaccgatttctgttttgactgacggggatgacaaaatacaaaatgccgttgttgaagtttttcccaaggccagacatcgtctatgttcgtggcacatcgagaagaacttgggtacaatcattaaggacccggacgtggtgaaagctttcactcaatttttatacaatgctataccaccggatgagtgggaactgggctggaagtctatggtagagacctatgggcttcaagacaatccatggattaatatgatgtaccacaggcgcaagagatgggcagaggcattttttaaaggccatttttttggtggaatgagtagcatgcaacgttgccaggggatccataggaatctggagagtgcgctaggtaagtatgacaggttttgtgaatatattccccgaatggacaagaccctgaggaaaatgagaaataatattagcgtggatgaccttaaatgcgagaactcaaagccagtcattattactcacatgcggtctttggagcagcagatagctgagatcttcactcatgacatctacttgctgataatgcaccagatagattgggagagaaaatacataatcaccaagtctgagccatatgcacaaggggacggtaaagtgtttcacctgacccagtatgacttgccacacaggcattggactgttaattaccaccatagtataagcaaagtgtggttcttgtgctcatgcaaactatttcagtcagacggaatcccttgtgcccatatattttcagtaatgaaagctgagctgatattgaagttacctgattccttggttctgaagcgatggacaatggatgtggggaagccagtgaacttgcataatttgtcggacaggaatttgcaaatggtaaggtatgcatccttggcttcagaaatcaaaagtatatgtttcccagcatctatgactgaaggaggaaccaagaagatgaaatgtgaaattgcgaagctggccaagccggcccatgatcgcagggagagccaaaaccacagtttattgcagaatttgatacatcgtcaccaacttcatgttggatcagacgcccacagctttaccggtttttcagttggcatcaatgccgaacattacgctcgcagtcttcctccgggtgaattcagaacctatttctattgggtataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

889

Amino Acids

100.55

Weight (kDa)

7.84

Isoelectric Point (pI)

39.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016744)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g00731
rosa_chinensis	RchiOBHm_Chr6g0251121
rosa_laevigata	RLG00000015482
rosa_multiflora	Rmu_co7984096.1_g000001 Rmu_sc0002219.1_g000011 Rmu_sc0002219.1_g000018 Rmu_sc0011355.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217020
rosa_samantha	Rh6AG008800 Rh6AG009300 Rh6BG002500 Rh6CG006200 Rh6DG006500
rosa_wichuraiana	Rw6G000940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	854, 968
Acc36I	ACCTGC	2 cut(s)	854, 968
AccB7I	CCANNNNNTGG	3 cut(s)	638, 866, 980
AciI	CCGC	6 cut(s)	439, 948, 951, 1091, 1187, 1996
AclI	AACGTT	1 cut(s)	1831
AclWI	GGATC	6 cut(s)	1217, 1230, 1432, 1837, 1850, 2572
AcoI	YGGCCR	1 cut(s)	2481
AcsI	RAATTY	7 cut(s)	157, 234, 1229, 1273, 2368, 2533, 2642
AcuI	CTGAAG	4 cut(s)	51, 2330, 2385, 2460
AcyI	GRCGYC	1 cut(s)	2571
AfaI	GTAC	5 cut(s)	146, 696, 1345, 1618, 1760
AfiI	CCNNNNNNNGG	6 cut(s)	638, 866, 980, 1094, 1464, 1639
AgeI	ACCGGT	1 cut(s)	2585
AjiI	CACGTC	1 cut(s)	1639
AjnI	CCWGG	2 cut(s)	395, 1836
AjuI	GAANNNNNNNTTGG	4 cut(s)	545, 577, 1264, 1296
Alw21I	GWGCWC	2 cut(s)	492, 2213
Alw26I	GTCTC	3 cut(s)	83, 262, 1712
AlwI	GGATC	6 cut(s)	1217, 1230, 1432, 1837, 1850, 2572
AoxI	GGCC	7 cut(s)	133, 286, 1370, 1572, 1798, 2481, 2490
ApeKI	GCWGC	6 cut(s)	245, 425, 728, 836, 1214, 2008
ApoI	RAATTY	7 cut(s)	157, 234, 1229, 1273, 2368, 2533, 2642
AseI	ATTAAT	1 cut(s)	1749
AsiGI	ACCGGT	1 cut(s)	2585
Asp700I	GAANNNNTTC	3 cut(s)	1563, 1649, 1896
AspLEI	GCGC	2 cut(s)	1770, 1867
AspS9I	GGNCC	5 cut(s)	134, 286, 1371, 1630, 2491
AsuC2I	CCSGG	2 cut(s)	1634, 2637
AsuHPI	GGTGA	9 cut(s)	331, 620, 1187, 1265, 1654, 2080, 2123, 2540, 2651
AvaII	GGWCC	1 cut(s)	1630
AxyI	CCTNAGG	1 cut(s)	1919
BaeGI	GKGCMC	2 cut(s)	1412, 2251
BalI	TGGCCA	1 cut(s)	2483
BamHI	GGATCC	2 cut(s)	1222, 1842
BbsI	GAAGAC	2 cut(s)	102, 2621
Bbv12I	GWGCWC	2 cut(s)	492, 2213
BbvI	GCAGC	6 cut(s)	232, 412, 715, 823, 1201, 2020
BccI	CCATC	7 cut(s)	17, 125, 182, 640, 1410, 1770, 2310
BceAI	ACGGC	1 cut(s)	1535
BciT130I	CCWGG	2 cut(s)	397, 1838
BcnI	CCSGG	2 cut(s)	1634, 2637
BcoDI	GTCTC	3 cut(s)	83, 262, 1712
BfaI	CTAG	5 cut(s)	351, 1062, 1314, 1376, 1868
BfmI	CTRYAG	1 cut(s)	1215
BfuAI	ACCTGC	2 cut(s)	854, 968
BglI	GCCNNNNNGGC	3 cut(s)	294, 2158, 2489
BglII	AGATCT	1 cut(s)	2022
BisI	GCNGC	9 cut(s)	246, 426, 729, 837, 948, 951, 1188, 1215, 2009
BlpI	GCTNAGC	1 cut(s)	2274
BlsI	GCNGC	9 cut(s)	247, 427, 730, 838, 949, 952, 1189, 1216, 2010
Bme1390I	CCNGG	4 cut(s)	397, 1634, 1838, 2637
Bme18I	GGWCC	1 cut(s)	1630
BmgBI	CACGTC	1 cut(s)	1639
BmgT120I	GGNCC	5 cut(s)	134, 286, 1371, 1630, 2491
BmiI	GGNNCC	7 cut(s)	257, 287, 1224, 1373, 1632, 1844, 2449
BmrFI	CCNGG	4 cut(s)	397, 1634, 1838, 2637
BmrI	ACTGGG	2 cut(s)	1706, 2134
BmsI	GCATC	8 cut(s)	205, 448, 634, 848, 962, 2399, 2438, 2610
BmuI	ACTGGG	2 cut(s)	1706, 2134
BpiI	GAAGAC	2 cut(s)	102, 2621
BpmI	CTGGAG	1 cut(s)	1877
Bpu1102I	GCTNAGC	1 cut(s)	2274
BpuMI	CCSGG	2 cut(s)	1634, 2637
BsaHI	GRCGYC	1 cut(s)	2571
BsaI	GGTCTC	1 cut(s)	1712
BsaJI	CCNNGG	7 cut(s)	395, 447, 1569, 1742, 1837, 2301, 2394
BsaWI	WCCGGW	2 cut(s)	1681, 2585
BsaXI	ACNNNNNCTCC	2 cut(s)	792, 822
Bsc4I	CCNNNNNNNGG	6 cut(s)	638, 866, 980, 1094, 1464, 1639
Bse118I	RCCGGY	2 cut(s)	2488, 2585
Bse1I	ACTGG	6 cut(s)	745, 1440, 1701, 1976, 2140, 2339
Bse21I	CCTNAGG	1 cut(s)	1919
Bse3DI	GCAATG	3 cut(s)	585, 927, 1041
BseBI	CCWGG	2 cut(s)	397, 1838
BseDI	CCNNGG	7 cut(s)	395, 447, 1569, 1742, 1837, 2301, 2394
BseGI	GGATG	7 cut(s)	1084, 1330, 1537, 1690, 1954, 2332, 2390
BseLI	CCNNNNNNNGG	6 cut(s)	638, 866, 980, 1094, 1464, 1639
BseMI	GCAATG	3 cut(s)	585, 927, 1041
BseMII	CTCAG	7 cut(s)	477, 857, 971, 1910, 2010, 2088, 2265
BseNI	ACTGG	6 cut(s)	745, 1440, 1701, 1976, 2140, 2339
BseSI	GKGCMC	2 cut(s)	1412, 2251
BseXI	GCAGC	6 cut(s)	232, 412, 715, 823, 1201, 2020
BseYI	CCCAGC	1 cut(s)	2425
BsgI	GTGCAG	2 cut(s)	231, 1043
BshFI	GGCC	7 cut(s)	135, 288, 1372, 1574, 1800, 2483, 2492
BshTI	ACCGGT	1 cut(s)	2585
BsiHKAI	GWGCWC	2 cut(s)	492, 2213
BsiSI	CCGG	5 cut(s)	1634, 1682, 2489, 2586, 2636
BslFI	GGGAC	2 cut(s)	205, 2129
BslI	CCNNNNNNNGG	6 cut(s)	638, 866, 980, 1094, 1464, 1639
BsmAI	GTCTC	3 cut(s)	83, 262, 1712
BsmFI	GGGAC	2 cut(s)	205, 2129
BsmI	GAATGC	1 cut(s)	1210
BsnI	GGCC	7 cut(s)	135, 288, 1372, 1574, 1800, 2483, 2492
Bso31I	GGTCTC	1 cut(s)	1712
Bsp1286I	GDGCHC	4 cut(s)	492, 1412, 2213, 2251
Bsp1407I	TGTACA	1 cut(s)	1343
Bsp143I	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
Bsp1720I	GCTNAGC	1 cut(s)	2274
Bsp19I	CCATGG	1 cut(s)	1742
BspACI	CCGC	6 cut(s)	439, 948, 951, 1091, 1187, 1996
BspANI	GGCC	7 cut(s)	135, 288, 1372, 1574, 1800, 2483, 2492
BspCNI	CTCAG	7 cut(s)	478, 856, 970, 1911, 2011, 2089, 2266
BspHI	TCATGA	2 cut(s)	1200, 2032
BspLI	GGNNCC	7 cut(s)	257, 287, 1224, 1373, 1632, 1844, 2449
BspMAI	CTGCAG	1 cut(s)	1219
BspMI	ACCTGC	2 cut(s)	854, 968
BspPI	GGATC	6 cut(s)	1217, 1230, 1432, 1837, 1850, 2572
BspTNI	GGTCTC	1 cut(s)	1712
BsrDI	GCAATG	3 cut(s)	585, 927, 1041
BsrFI	RCCGGY	2 cut(s)	2488, 2585
BsrGI	TGTACA	1 cut(s)	1343
BsrI	ACTGG	6 cut(s)	745, 1440, 1701, 1976, 2140, 2339
BssAI	RCCGGY	2 cut(s)	2488, 2585
BssECI	CCNNGG	7 cut(s)	395, 447, 1569, 1742, 1837, 2301, 2394
BssMI	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
BssNI	GRCGYC	1 cut(s)	2571
BssT1I	CCWWGG	5 cut(s)	447, 1569, 1742, 2301, 2394
Bst2UI	CCWGG	2 cut(s)	397, 1838
Bst4CI	ACNGT	9 cut(s)	175, 301, 1030, 1302, 1343, 1414, 2120, 2170, 2522
Bst6I	CTCTTC	1 cut(s)	1115
BstACI	GRCGYC	1 cut(s)	2571
BstAPI	GCANNNNNTGC	1 cut(s)	1214
BstAUI	TGTACA	1 cut(s)	1343
BstC8I	GCNNGC	5 cut(s)	1265, 1826, 2481, 2490, 2623
BstDEI	CTNAG	8 cut(s)	305, 486, 843, 957, 1919, 2019, 2097, 2274
BstDSI	CCRYGG	1 cut(s)	1742
BstF5I	GGATG	7 cut(s)	1084, 1330, 1537, 1690, 1954, 2332, 2390
BstHHI	GCGC	2 cut(s)	1770, 1867
BstKTI	GATC	8 cut(s)	283, 899, 1225, 1427, 1845, 2025, 2500, 2567
BstMAI	GTCTC	3 cut(s)	83, 262, 1712
BstMBI	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
BstNI	CCWGG	2 cut(s)	397, 1838
BstNSI	RCATGY	4 cut(s)	875, 989, 1828, 1996
BstSCI	CCNGG	4 cut(s)	395, 1632, 1836, 2635
BstSFI	CTRYAG	1 cut(s)	1215
BstSLI	GKGCMC	2 cut(s)	1412, 2251
BstV1I	GCAGC	6 cut(s)	232, 412, 715, 823, 1201, 2020
BstV2I	GAAGAC	2 cut(s)	102, 2621
BstX2I	RGATCY	4 cut(s)	1222, 1424, 1842, 2022
BstXI	CCANNNNNNTGG	2 cut(s)	752, 1808
BstYI	RGATCY	4 cut(s)	1222, 1424, 1842, 2022
Bsu36I	CCTNAGG	1 cut(s)	1919
BsuRI	GGCC	7 cut(s)	135, 288, 1372, 1574, 1800, 2483, 2492
BtgI	CCRYGG	1 cut(s)	1742
BtgZI	GCGATG	2 cut(s)	1505, 2329
BtrI	CACGTC	1 cut(s)	1639
BtsCI	GGATG	7 cut(s)	1084, 1330, 1537, 1690, 1954, 2332, 2390
BtsI	GCAGTG	2 cut(s)	813, 831
BtsIMutI	CAGTG	8 cut(s)	75, 297, 813, 831, 1035, 1298, 1410, 2346
BveI	ACCTGC	2 cut(s)	854, 968
Cac8I	GCNNGC	5 cut(s)	1265, 1826, 2481, 2490, 2623
CciI	TCATGA	2 cut(s)	1200, 2032
CfoI	GCGC	2 cut(s)	1770, 1867
Cfr10I	RCCGGY	2 cut(s)	2488, 2585
Cfr13I	GGNCC	5 cut(s)	134, 286, 1371, 1630, 2491
CseI	GACGC	2 cut(s)	1187, 2579
Csp6I	GTAC	5 cut(s)	145, 695, 1344, 1617, 1759
CspAI	ACCGGT	1 cut(s)	2585
CspCI	CAANNNNNGTGG	2 cut(s)	2310, 2345
CviQI	GTAC	5 cut(s)	145, 695, 1344, 1617, 1759
DdeI	CTNAG	8 cut(s)	305, 486, 843, 957, 1919, 2019, 2097, 2274
DpnI	GATC	8 cut(s)	282, 898, 1224, 1426, 1844, 2024, 2499, 2566
DpnII	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
DraI	TTTAAA	1 cut(s)	1795
EaeI	YGGCCR	1 cut(s)	2481
Eam1104I	CTCTTC	1 cut(s)	1115
EarI	CTCTTC	1 cut(s)	1115
Eco130I	CCWWGG	5 cut(s)	447, 1569, 1742, 2301, 2394
Eco31I	GGTCTC	1 cut(s)	1712
Eco47I	GGWCC	1 cut(s)	1630
Eco57I	CTGAAG	4 cut(s)	51, 2330, 2385, 2460
Eco81I	CCTNAGG	1 cut(s)	1919
EcoO109I	RGGNCCY	3 cut(s)	286, 1371, 1630
EcoRI	GAATTC	1 cut(s)	2642
EcoRII	CCWGG	2 cut(s)	395, 1836
EcoT14I	CCWWGG	5 cut(s)	447, 1569, 1742, 2301, 2394
EcoT22I	ATGCAT	1 cut(s)	2392
ErhI	CCWWGG	5 cut(s)	447, 1569, 1742, 2301, 2394
FaqI	GGGAC	2 cut(s)	205, 2129
FauI	CCCGC	1 cut(s)	1084
FauNDI	CATATG	5 cut(s)	121, 733, 963, 1069, 2104
Fnu4HI	GCNGC	9 cut(s)	246, 426, 729, 837, 948, 951, 1188, 1215, 2009
FokI	GGATG	7 cut(s)	1071, 1337, 1544, 1697, 1961, 2339, 2377
Fsp4HI	GCNGC	9 cut(s)	246, 426, 729, 837, 948, 951, 1188, 1215, 2009
FspBI	CTAG	5 cut(s)	351, 1062, 1314, 1376, 1868
GlaI	GCGC	2 cut(s)	1769, 1866
GluI	GCNGC	9 cut(s)	246, 426, 729, 837, 948, 951, 1188, 1215, 2009
GsaI	CCCAGC	1 cut(s)	2429
GsuI	CTGGAG	1 cut(s)	1877
HaeIII	GGCC	7 cut(s)	135, 288, 1372, 1574, 1800, 2483, 2492
HapII	CCGG	5 cut(s)	1634, 1682, 2489, 2586, 2636
HgaI	GACGC	2 cut(s)	1187, 2579
HhaI	GCGC	2 cut(s)	1770, 1867
Hin1I	GRCGYC	1 cut(s)	2571
Hin6I	GCGC	2 cut(s)	1768, 1865
HinP1I	GCGC	2 cut(s)	1768, 1865
HindIII	AAGCTT	2 cut(s)	1161, 1647
HpaII	CCGG	5 cut(s)	1634, 1682, 2489, 2586, 2636
HphI	GGTGA	9 cut(s)	331, 620, 1187, 1265, 1654, 2080, 2123, 2540, 2651
Hpy166II	GTNNAC	5 cut(s)	392, 869, 983, 1298, 2344
Hpy188III	TCNNGA	8 cut(s)	164, 1201, 1226, 1351, 1603, 1733, 1856, 2033
Hpy8I	GTNNAC	5 cut(s)	392, 869, 983, 1298, 2344
HpyAV	CCTTC	3 cut(s)	1207, 1489, 2435
HpyCH4III	ACNGT	9 cut(s)	175, 301, 1030, 1302, 1343, 1414, 2120, 2170, 2522
HpyCH4IV	ACGT	2 cut(s)	1638, 1831
HpyF3I	CTNAG	8 cut(s)	305, 486, 843, 957, 1919, 2019, 2097, 2274
HpySE526I	ACGT	2 cut(s)	1638, 1831
Hsp92I	GRCGYC	1 cut(s)	2571
HspAI	GCGC	2 cut(s)	1768, 1865
KroI	GCCGGC	1 cut(s)	2488
KroNI	GCCGGC	1 cut(s)	2490
Kzo9I	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
LmnI	GCTCC	4 cut(s)	125, 793, 907, 2005
Lsp1109I	GCAGC	6 cut(s)	232, 412, 715, 823, 1201, 2020
LweI	GCATC	8 cut(s)	205, 448, 634, 848, 962, 2399, 2438, 2610
MaeI	CTAG	5 cut(s)	351, 1062, 1314, 1376, 1868
MaeII	ACGT	2 cut(s)	1638, 1831
MaeIII	GTNAC	3 cut(s)	1175, 2289, 2546
MalI	GATC	8 cut(s)	282, 898, 1224, 1426, 1844, 2024, 2499, 2566
MboI	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
MfeI	CAATTG	1 cut(s)	1191
MflI	RGATCY	4 cut(s)	1222, 1424, 1842, 2022
MhlI	GDGCHC	4 cut(s)	492, 1412, 2213, 2251
MlsI	TGGCCA	1 cut(s)	2483
MluNI	TGGCCA	1 cut(s)	2483
MlyI	GAGTC	4 cut(s)	53, 605, 719, 1055
MmeI	TCCRAC	4 cut(s)	993, 1284, 2340, 2542
Mox20I	TGGCCA	1 cut(s)	2483
Mph1103I	ATGCAT	1 cut(s)	2392
MroNI	GCCGGC	1 cut(s)	2488
MroXI	GAANNNNTTC	3 cut(s)	1563, 1649, 1896
MscI	TGGCCA	1 cut(s)	2483
Msp20I	TGGCCA	1 cut(s)	2483
MspI	CCGG	5 cut(s)	1634, 1682, 2489, 2586, 2636
MspR9I	CCNGG	4 cut(s)	397, 1634, 1838, 2637
MunI	CAATTG	1 cut(s)	1191
Mva1269I	GAATGC	1 cut(s)	1210
MvaI	CCWGG	2 cut(s)	397, 1838
NaeI	GCCGGC	1 cut(s)	2490
NciI	CCSGG	2 cut(s)	1634, 2637
NcoI	CCATGG	1 cut(s)	1742
NdeI	CATATG	5 cut(s)	121, 733, 963, 1069, 2104
NdeII	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
NgoMIV	GCCGGC	1 cut(s)	2488
NlaIV	GGNNCC	7 cut(s)	257, 287, 1224, 1373, 1632, 1844, 2449
NmeAIII	GCCGAG	1 cut(s)	1181
NmuCI	GTSAC	2 cut(s)	1175, 2546
NsiI	ATGCAT	1 cut(s)	2392
NspI	RCATGY	4 cut(s)	875, 989, 1828, 1996
PaeI	GCATGC	1 cut(s)	1828
PagI	TCATGA	2 cut(s)	1200, 2032
PaqCI	CACCTGC	2 cut(s)	854, 968
PctI	GAATGC	1 cut(s)	1210
PdiI	GCCGGC	1 cut(s)	2490
PdmI	GAANNNNTTC	3 cut(s)	1563, 1649, 1896
PfeI	GAWTC	6 cut(s)	62, 782, 1289, 1852, 2238, 2297
PflFI	GACNNNGTC	1 cut(s)	1581
PflMI	CCANNNNNTGG	3 cut(s)	638, 866, 980
PinAI	ACCGGT	1 cut(s)	2585
PkrI	GCNGC	9 cut(s)	247, 427, 730, 838, 949, 952, 1189, 1216, 2010
PleI	GAGTC	4 cut(s)	52, 604, 718, 1054
PpsI	GAGTC	4 cut(s)	52, 604, 718, 1054
PpuMI	RGGWCCY	1 cut(s)	1630
PshBI	ATTAAT	1 cut(s)	1749
Psp1406I	AACGTT	1 cut(s)	1831
Psp5II	RGGWCCY	1 cut(s)	1630
Psp6I	CCWGG	2 cut(s)	395, 1836
PspFI	CCCAGC	1 cut(s)	2425
PspGI	CCWGG	2 cut(s)	395, 1836
PspN4I	GGNNCC	7 cut(s)	257, 287, 1224, 1373, 1632, 1844, 2449
PspPI	GGNCC	5 cut(s)	134, 286, 1371, 1630, 2491
PspPPI	RGGWCCY	1 cut(s)	1630
PstI	CTGCAG	1 cut(s)	1219
PsuI	RGATCY	4 cut(s)	1222, 1424, 1842, 2022
PsyI	GACNNNGTC	1 cut(s)	1581
RsaI	GTAC	5 cut(s)	146, 696, 1345, 1618, 1760
RsaNI	GTAC	5 cut(s)	145, 695, 1344, 1617, 1759
SatI	GCNGC	9 cut(s)	246, 426, 729, 837, 948, 951, 1188, 1215, 2009
Sau3AI	GATC	8 cut(s)	280, 896, 1222, 1424, 1842, 2022, 2497, 2564
Sau96I	GGNCC	5 cut(s)	134, 286, 1371, 1630, 2491
SchI	GAGTC	4 cut(s)	53, 605, 719, 1055
ScrFI	CCNGG	4 cut(s)	397, 1634, 1838, 2637
SduI	GDGCHC	4 cut(s)	492, 1412, 2213, 2251
SfaNI	GCATC	8 cut(s)	205, 448, 634, 848, 962, 2399, 2438, 2610
SfcI	CTRYAG	1 cut(s)	1215
SfiI	GGCCNNNNNGGCC	1 cut(s)	2489
SinI	GGWCC	1 cut(s)	1630
SphI	GCATGC	1 cut(s)	1828
SsiI	CCGC	6 cut(s)	439, 948, 951, 1091, 1187, 1996
SspI	AATATT	1 cut(s)	1939
SspMI	CTAG	5 cut(s)	351, 1062, 1314, 1376, 1868
StyD4I	CCNGG	4 cut(s)	395, 1632, 1836, 2635
StyI	CCWWGG	5 cut(s)	447, 1569, 1742, 2301, 2394
TaaI	ACNGT	9 cut(s)	175, 301, 1030, 1302, 1343, 1414, 2120, 2170, 2522
TaiI	ACGT	2 cut(s)	1641, 1834
TaqI	TCGA	3 cut(s)	377, 1338, 1602
TatI	WGTACW	2 cut(s)	144, 1343
TauI	GCSGC	3 cut(s)	950, 953, 1190
TfiI	GAWTC	6 cut(s)	62, 782, 1289, 1852, 2238, 2297
TscAI	CASTG	8 cut(s)	75, 304, 813, 838, 1035, 1305, 1417, 2346
TseFI	GTSAC	2 cut(s)	1175, 2546
TseI	GCWGC	6 cut(s)	245, 425, 728, 836, 1214, 2008
Tsp45I	GTSAC	2 cut(s)	1175, 2546
TspDTI	ATGAA	9 cut(s)	246, 1073, 1133, 1189, 1217, 1508, 2282, 2474, 2546
TspGWI	ACGGA	2 cut(s)	248, 2250
TspRI	CASTG	8 cut(s)	75, 304, 813, 838, 1035, 1305, 1417, 2346
Tth111I	GACNNNGTC	1 cut(s)	1581
Van91I	CCANNNNNTGG	3 cut(s)	638, 866, 980
VpaK11BI	GGWCC	1 cut(s)	1630
VspI	ATTAAT	1 cut(s)	1749
XapI	RAATTY	7 cut(s)	157, 234, 1229, 1273, 2368, 2533, 2642
XceI	RCATGY	4 cut(s)	875, 989, 1828, 1996
XcmI	CCANNNNNNNNNTGG	4 cut(s)	1686, 1808, 2160, 2558
XmnI	GAANNNNTTC	3 cut(s)	1563, 1649, 1896
XspI	CTAG	5 cut(s)	351, 1062, 1314, 1376, 1868
Zsp2I	ATGCAT	1 cut(s)	2392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.