AarF domain-containing protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G71810 |
| fragaria_vesca | FvH4_2g12660 FvH4_2g12660 FvH4_2g12660 FvH4_2g12660 |
| malus_domestica | MD10G1042100.v1.1 |
| prunus_persica | Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 |
| pyrus_communis | pycom10g02920 |
| rosa_chinensis | RchiOBHm_Chr6g0273371 |
| rosa_laevigata | RLG00000013622 |
| rosa_multiflora | Rmu_sc0000239.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00195430 |
| rosa_rugosa | Rorug06G0074300 Rorug06G0074400 |
| rosa_samantha | Rh6AG189500 Rh6BG192900 Rh6CG192700 Rh6DG184200 |
| rosa_wichuraiana | Rw6G016490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 209 |
| AccBSI | CCGCTC | 1 cut(s) | 87 |
| AccII | CGCG | 1 cut(s) | 164 |
| AclI | AACGTT | 1 cut(s) | 1755 |
| AclWI | GGATC | 2 cut(s) | 1007, 1963 |
| AcoI | YGGCCR | 2 cut(s) | 183, 1158 |
| AcsI | RAATTY | 4 cut(s) | 1085, 1316, 1322, 1685 |
| AcuI | CTGAAG | 2 cut(s) | 725, 1664 |
| AcyI | GRCGYC | 3 cut(s) | 123, 210, 2053 |
| AfaI | GTAC | 3 cut(s) | 642, 657, 1313 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1022 |
| AflII | CTTAAG | 1 cut(s) | 1813 |
| AgsI | TTSAA | 6 cut(s) | 979, 1118, 1321, 1396, 1945, 1964 |
| AjnI | CCWGG | 2 cut(s) | 649, 2048 |
| AleI | CACNNNNGTG | 1 cut(s) | 1739 |
| Alw21I | GWGCWC | 2 cut(s) | 453, 2001 |
| Alw26I | GTCTC | 4 cut(s) | 32, 417, 776, 1539 |
| AlwI | GGATC | 2 cut(s) | 1007, 1963 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 566, 925, 988 |
| Ama87I | CYCGRG | 1 cut(s) | 1021 |
| AoxI | GGCC | 5 cut(s) | 77, 171, 183, 647, 1158 |
| ApeKI | GCWGC | 4 cut(s) | 344, 572, 575, 662 |
| ApoI | RAATTY | 4 cut(s) | 1085, 1316, 1322, 1685 |
| AspLEI | GCGC | 2 cut(s) | 104, 212 |
| AspS9I | GGNCC | 2 cut(s) | 78, 377 |
| AsuC2I | CCSGG | 2 cut(s) | 1022, 1023 |
| AsuII | TTCGAA | 1 cut(s) | 1357 |
| AvaI | CYCGRG | 1 cut(s) | 1021 |
| AvaII | GGWCC | 1 cut(s) | 377 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 578, 611 |
| BalI | TGGCCA | 1 cut(s) | 1160 |
| BanI | GGYRCC | 1 cut(s) | 209 |
| BanII | GRGCYC | 2 cut(s) | 453, 2001 |
| BbsI | GAAGAC | 2 cut(s) | 1806, 1872 |
| Bbv12I | GWGCWC | 2 cut(s) | 453, 2001 |
| BbvI | GCAGC | 4 cut(s) | 331, 559, 587, 649 |
| BccI | CCATC | 7 cut(s) | 442, 778, 895, 1040, 1072, 1137, 1939 |
| BceAI | ACGGC | 1 cut(s) | 248 |
| BciT130I | CCWGG | 2 cut(s) | 651, 2050 |
| BciVI | GTATCC | 1 cut(s) | 1605 |
| BcnI | CCSGG | 2 cut(s) | 1022, 1023 |
| BcoDI | GTCTC | 4 cut(s) | 32, 417, 776, 1539 |
| BfaI | CTAG | 6 cut(s) | 603, 698, 1298, 1440, 1529, 1608 |
| BfmI | CTRYAG | 5 cut(s) | 254, 567, 573, 790, 1197 |
| BfoI | RGCGCY | 1 cut(s) | 213 |
| BfrI | CTTAAG | 1 cut(s) | 1813 |
| BfuI | GTATCC | 1 cut(s) | 1605 |
| BglII | AGATCT | 3 cut(s) | 552, 1282, 1294 |
| BisI | GCNGC | 6 cut(s) | 85, 105, 345, 573, 576, 663 |
| BlpI | GCTNAGC | 1 cut(s) | 348 |
| BlsI | GCNGC | 6 cut(s) | 86, 106, 346, 574, 577, 664 |
| Bme1390I | CCNGG | 4 cut(s) | 651, 1022, 1023, 2050 |
| Bme18I | GGWCC | 1 cut(s) | 377 |
| BmeT110I | CYCGRG | 1 cut(s) | 1021 |
| BmgT120I | GGNCC | 2 cut(s) | 78, 377 |
| BmiI | GGNNCC | 4 cut(s) | 80, 211, 858, 1929 |
| BmrFI | CCNGG | 4 cut(s) | 651, 1022, 1023, 2050 |
| BmsI | GCATC | 4 cut(s) | 89, 773, 1588, 1693 |
| BpiI | GAAGAC | 2 cut(s) | 1806, 1872 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 161, 193 |
| BpmI | CTGGAG | 1 cut(s) | 672 |
| Bpu10I | CCTNAGC | 1 cut(s) | 399 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 348 |
| Bpu14I | TTCGAA | 1 cut(s) | 1357 |
| BpuEI | CTTGAG | 1 cut(s) | 1457 |
| BpuMI | CCSGG | 2 cut(s) | 1022, 1023 |
| Bsa29I | ATCGAT | 1 cut(s) | 300 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1616 |
| BsaHI | GRCGYC | 3 cut(s) | 123, 210, 2053 |
| BsaJI | CCNNGG | 6 cut(s) | 74, 180, 1021, 1161, 1430, 1722 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1022 |
| Bse118I | RCCGGY | 1 cut(s) | 379 |
| Bse1I | ACTGG | 2 cut(s) | 284, 369 |
| Bse3DI | GCAATG | 1 cut(s) | 1111 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1616 |
| BseBI | CCWGG | 2 cut(s) | 651, 2050 |
| BseCI | ATCGAT | 1 cut(s) | 300 |
| BseDI | CCNNGG | 6 cut(s) | 74, 180, 1021, 1161, 1430, 1722 |
| BseGI | GGATG | 2 cut(s) | 451, 1708 |
| BseJI | GATNNNNATC | 1 cut(s) | 1616 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1022 |
| BseMI | GCAATG | 1 cut(s) | 1111 |
| BseMII | CTCAG | 4 cut(s) | 339, 413, 724, 1868 |
| BseNI | ACTGG | 2 cut(s) | 284, 369 |
| BseXI | GCAGC | 4 cut(s) | 331, 559, 587, 649 |
| Bsh1236I | CGCG | 1 cut(s) | 164 |
| Bsh1285I | CGRYCG | 1 cut(s) | 304 |
| BshFI | GGCC | 5 cut(s) | 79, 173, 185, 649, 1160 |
| BshNI | GGYRCC | 1 cut(s) | 209 |
| BshVI | ATCGAT | 1 cut(s) | 300 |
| BsiEI | CGRYCG | 1 cut(s) | 304 |
| BsiHKAI | GWGCWC | 2 cut(s) | 453, 2001 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1021 |
| BsiSI | CCGG | 6 cut(s) | 141, 223, 244, 380, 613, 1022 |
| BslFI | GGGAC | 4 cut(s) | 633, 930, 976, 1534 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1022 |
| BsmAI | GTCTC | 4 cut(s) | 32, 417, 776, 1539 |
| BsmBI | CGTCTC | 1 cut(s) | 417 |
| BsmFI | GGGAC | 4 cut(s) | 633, 930, 976, 1534 |
| BsmI | GAATGC | 1 cut(s) | 1249 |
| BsnI | GGCC | 5 cut(s) | 79, 173, 185, 649, 1160 |
| BsoBI | CYCGRG | 1 cut(s) | 1021 |
| Bsp119I | TTCGAA | 1 cut(s) | 1357 |
| Bsp1286I | GDGCHC | 2 cut(s) | 453, 2001 |
| Bsp1407I | TGTACA | 1 cut(s) | 1311 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 348 |
| Bsp19I | CCATGG | 1 cut(s) | 1430 |
| BspANI | GGCC | 5 cut(s) | 79, 173, 185, 649, 1160 |
| BspCNI | CTCAG | 4 cut(s) | 340, 412, 723, 1867 |
| BspDI | ATCGAT | 1 cut(s) | 300 |
| BspFNI | CGCG | 1 cut(s) | 164 |
| BspLI | GGNNCC | 4 cut(s) | 80, 211, 858, 1929 |
| BspMAI | CTGCAG | 2 cut(s) | 577, 1201 |
| BspPI | GGATC | 2 cut(s) | 1007, 1963 |
| BspQI | GCTCTTC | 1 cut(s) | 294 |
| BspT104I | TTCGAA | 1 cut(s) | 1357 |
| BspT107I | GGYRCC | 1 cut(s) | 209 |
| BspTI | CTTAAG | 1 cut(s) | 1813 |
| BsrBI | CCGCTC | 1 cut(s) | 87 |
| BsrDI | GCAATG | 1 cut(s) | 1111 |
| BsrFI | RCCGGY | 1 cut(s) | 379 |
| BsrGI | TGTACA | 1 cut(s) | 1311 |
| BsrI | ACTGG | 2 cut(s) | 284, 369 |
| BssAI | RCCGGY | 1 cut(s) | 379 |
| BssECI | CCNNGG | 6 cut(s) | 74, 180, 1021, 1161, 1430, 1722 |
| BssNI | GRCGYC | 3 cut(s) | 123, 210, 2053 |
| BssT1I | CCWWGG | 4 cut(s) | 180, 1161, 1430, 1722 |
| Bst2UI | CCWGG | 2 cut(s) | 651, 2050 |
| Bst4CI | ACNGT | 5 cut(s) | 459, 1142, 1576, 1738, 1895 |
| Bst6I | CTCTTC | 4 cut(s) | 42, 155, 294, 1542 |
| BstACI | GRCGYC | 3 cut(s) | 123, 210, 2053 |
| BstAFI | CTTAAG | 1 cut(s) | 1813 |
| BstAUI | TGTACA | 1 cut(s) | 1311 |
| BstBI | TTCGAA | 1 cut(s) | 1357 |
| BstC8I | GCNNGC | 4 cut(s) | 89, 1488, 1716, 2037 |
| BstDEI | CTNAG | 7 cut(s) | 348, 399, 673, 710, 1063, 1288, 1854 |
| BstDSI | CCRYGG | 1 cut(s) | 1430 |
| BstF5I | GGATG | 2 cut(s) | 451, 1708 |
| BstFNI | CGCG | 1 cut(s) | 164 |
| BstH2I | RGCGCY | 1 cut(s) | 213 |
| BstHHI | GCGC | 2 cut(s) | 104, 212 |
| BstMAI | GTCTC | 4 cut(s) | 32, 417, 776, 1539 |
| BstMCI | CGRYCG | 1 cut(s) | 304 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 131, 170, 1272 |
| BstNI | CCWGG | 2 cut(s) | 651, 2050 |
| BstSCI | CCNGG | 4 cut(s) | 649, 1020, 1021, 2048 |
| BstSFI | CTRYAG | 5 cut(s) | 254, 567, 573, 790, 1197 |
| BstUI | CGCG | 1 cut(s) | 164 |
| BstV1I | GCAGC | 4 cut(s) | 331, 559, 587, 649 |
| BstV2I | GAAGAC | 2 cut(s) | 1806, 1872 |
| BstX2I | RGATCY | 5 cut(s) | 552, 1012, 1282, 1294, 1955 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 181 |
| BstYI | RGATCY | 5 cut(s) | 552, 1012, 1282, 1294, 1955 |
| Bsu15I | ATCGAT | 1 cut(s) | 300 |
| BsuI | GTATCC | 1 cut(s) | 1605 |
| BsuRI | GGCC | 5 cut(s) | 79, 173, 185, 649, 1160 |
| BsuTUI | ATCGAT | 1 cut(s) | 300 |
| BtgI | CCRYGG | 1 cut(s) | 1430 |
| BtsCI | GGATG | 2 cut(s) | 451, 1708 |
| BtsIMutI | CAGTG | 3 cut(s) | 455, 732, 1734 |
| Cac8I | GCNNGC | 4 cut(s) | 89, 1488, 1716, 2037 |
| CaiI | CAGNNNCTG | 3 cut(s) | 566, 925, 988 |
| CfoI | GCGC | 2 cut(s) | 104, 212 |
| Cfr10I | RCCGGY | 1 cut(s) | 379 |
| Cfr13I | GGNCC | 2 cut(s) | 78, 377 |
| Cfr9I | CCCGGG | 1 cut(s) | 1021 |
| ClaI | ATCGAT | 1 cut(s) | 300 |
| CseI | GACGC | 3 cut(s) | 131, 153, 2042 |
| Csp6I | GTAC | 3 cut(s) | 641, 656, 1312 |
| CviAII | CATG | 2 cut(s) | 1309, 1431 |
| CviQI | GTAC | 3 cut(s) | 641, 656, 1312 |
| DdeI | CTNAG | 7 cut(s) | 348, 399, 673, 710, 1063, 1288, 1854 |
| DinI | GGCGCC | 1 cut(s) | 211 |
| DraI | TTTAAA | 1 cut(s) | 1090 |
| EaeI | YGGCCR | 2 cut(s) | 183, 1158 |
| Eam1104I | CTCTTC | 4 cut(s) | 42, 155, 294, 1542 |
| EarI | CTCTTC | 4 cut(s) | 42, 155, 294, 1542 |
| EciI | GGCGGA | 2 cut(s) | 60, 1940 |
| Ecl136II | GAGCTC | 2 cut(s) | 451, 1999 |
| Eco130I | CCWWGG | 4 cut(s) | 180, 1161, 1430, 1722 |
| Eco147I | AGGCCT | 1 cut(s) | 649 |
| Eco24I | GRGCYC | 2 cut(s) | 453, 2001 |
| Eco47I | GGWCC | 1 cut(s) | 377 |
| Eco53kI | GAGCTC | 2 cut(s) | 451, 1999 |
| Eco57I | CTGAAG | 2 cut(s) | 725, 1664 |
| Eco88I | CYCGRG | 1 cut(s) | 1021 |
| EcoICRI | GAGCTC | 2 cut(s) | 451, 1999 |
| EcoRII | CCWGG | 2 cut(s) | 649, 2048 |
| EcoT14I | CCWWGG | 4 cut(s) | 180, 1161, 1430, 1722 |
| EcoT38I | GRGCYC | 2 cut(s) | 453, 2001 |
| EgeI | GGCGCC | 1 cut(s) | 211 |
| EheI | GGCGCC | 1 cut(s) | 211 |
| ErhI | CCWWGG | 4 cut(s) | 180, 1161, 1430, 1722 |
| Esp3I | CGTCTC | 1 cut(s) | 417 |
| FaeI | CATG | 2 cut(s) | 1312, 1434 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 591, 623, 1479, 1511, 1796, 1828 |
| FaqI | GGGAC | 4 cut(s) | 633, 930, 976, 1534 |
| FatI | CATG | 2 cut(s) | 1308, 1430 |
| FauI | CCCGC | 1 cut(s) | 89 |
| FauNDI | CATATG | 1 cut(s) | 1900 |
| Fnu4HI | GCNGC | 6 cut(s) | 85, 105, 345, 573, 576, 663 |
| FokI | GGATG | 2 cut(s) | 458, 1715 |
| FriOI | GRGCYC | 2 cut(s) | 453, 2001 |
| Fsp4HI | GCNGC | 6 cut(s) | 85, 105, 345, 573, 576, 663 |
| FspBI | CTAG | 6 cut(s) | 603, 698, 1298, 1440, 1529, 1608 |
| GlaI | GCGC | 2 cut(s) | 103, 211 |
| GluI | GCNGC | 6 cut(s) | 85, 105, 345, 573, 576, 663 |
| GsuI | CTGGAG | 1 cut(s) | 672 |
| HaeII | RGCGCY | 1 cut(s) | 213 |
| HaeIII | GGCC | 5 cut(s) | 79, 173, 185, 649, 1160 |
| HapII | CCGG | 6 cut(s) | 141, 223, 244, 380, 613, 1022 |
| HgaI | GACGC | 3 cut(s) | 131, 153, 2042 |
| HhaI | GCGC | 2 cut(s) | 104, 212 |
| Hin1I | GRCGYC | 3 cut(s) | 123, 210, 2053 |
| Hin1II | CATG | 2 cut(s) | 1312, 1434 |
| Hin6I | GCGC | 2 cut(s) | 102, 210 |
| HinP1I | GCGC | 2 cut(s) | 102, 210 |
| HindIII | AAGCTT | 1 cut(s) | 1119 |
| HinfI | GANTC | 7 cut(s) | 249, 1532, 1547, 1727, 1868, 1906, 2009 |
| HpaII | CCGG | 6 cut(s) | 141, 223, 244, 380, 613, 1022 |
| Hpy166II | GTNNAC | 1 cut(s) | 1138 |
| Hpy188I | TCNGA | 9 cut(s) | 98, 169, 322, 824, 931, 1242, 1517, 1857, 2087 |
| Hpy8I | GTNNAC | 1 cut(s) | 1138 |
| Hpy99I | CGWCG | 4 cut(s) | 122, 125, 169, 1830 |
| HpyCH4III | ACNGT | 5 cut(s) | 459, 1142, 1576, 1738, 1895 |
| HpyCH4IV | ACGT | 2 cut(s) | 1755, 1825 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 131, 170, 1272 |
| HpyF3I | CTNAG | 7 cut(s) | 348, 399, 673, 710, 1063, 1288, 1854 |
| HpySE526I | ACGT | 2 cut(s) | 1755, 1825 |
| Hsp92I | GRCGYC | 3 cut(s) | 123, 210, 2053 |
| Hsp92II | CATG | 2 cut(s) | 1312, 1434 |
| HspAI | GCGC | 2 cut(s) | 102, 210 |
| KasI | GGCGCC | 1 cut(s) | 209 |
| LguI | GCTCTTC | 1 cut(s) | 294 |
| LmnI | GCTCC | 1 cut(s) | 323 |
| Lsp1109I | GCAGC | 4 cut(s) | 331, 559, 587, 649 |
| LweI | GCATC | 4 cut(s) | 89, 773, 1588, 1693 |
| MaeI | CTAG | 6 cut(s) | 603, 698, 1298, 1440, 1529, 1608 |
| MaeII | ACGT | 2 cut(s) | 1755, 1825 |
| MaeIII | GTNAC | 5 cut(s) | 265, 1171, 1213, 1744, 2022 |
| MbiI | CCGCTC | 1 cut(s) | 87 |
| MflI | RGATCY | 5 cut(s) | 552, 1012, 1282, 1294, 1955 |
| MhlI | GDGCHC | 2 cut(s) | 453, 2001 |
| MlsI | TGGCCA | 1 cut(s) | 1160 |
| MluNI | TGGCCA | 1 cut(s) | 1160 |
| Mly113I | GGCGCC | 1 cut(s) | 210 |
| MlyI | GAGTC | 4 cut(s) | 243, 1541, 1556, 1862 |
| MmeI | TCCRAC | 2 cut(s) | 147, 1561 |
| Mox20I | TGGCCA | 1 cut(s) | 1160 |
| MscI | TGGCCA | 1 cut(s) | 1160 |
| MseI | TTAA | 8 cut(s) | 425, 636, 728, 1089, 1226, 1692, 1814, 2028 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1429, 1739 |
| Msp20I | TGGCCA | 1 cut(s) | 1160 |
| MspA1I | CMGCKG | 1 cut(s) | 2039 |
| MspCI | CTTAAG | 1 cut(s) | 1813 |
| MspI | CCGG | 6 cut(s) | 141, 223, 244, 380, 613, 1022 |
| MspR9I | CCNGG | 4 cut(s) | 651, 1022, 1023, 2050 |
| Mva1269I | GAATGC | 1 cut(s) | 1249 |
| MvaI | CCWGG | 2 cut(s) | 651, 2050 |
| MvnI | CGCG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 131, 170, 1272 |
| NarI | GGCGCC | 1 cut(s) | 210 |
| NciI | CCSGG | 2 cut(s) | 1022, 1023 |
| NcoI | CCATGG | 1 cut(s) | 1430 |
| NdeI | CATATG | 1 cut(s) | 1900 |
| NlaIII | CATG | 2 cut(s) | 1312, 1434 |
| NlaIV | GGNNCC | 4 cut(s) | 80, 211, 858, 1929 |
| NmeAIII | GCCGAG | 1 cut(s) | 55 |
| NmuCI | GTSAC | 1 cut(s) | 265 |
| NspV | TTCGAA | 1 cut(s) | 1357 |
| OliI | CACNNNNGTG | 1 cut(s) | 1739 |
| PceI | AGGCCT | 1 cut(s) | 649 |
| PciSI | GCTCTTC | 1 cut(s) | 294 |
| PctI | GAATGC | 1 cut(s) | 1249 |
| PfeI | GAWTC | 3 cut(s) | 1727, 1906, 2009 |
| PflFI | GACNNNGTC | 1 cut(s) | 163 |
| PkrI | GCNGC | 6 cut(s) | 86, 106, 346, 574, 577, 664 |
| Ple19I | CGATCG | 1 cut(s) | 304 |
| PleI | GAGTC | 4 cut(s) | 243, 1540, 1555, 1862 |
| PluTI | GGCGCC | 1 cut(s) | 213 |
| PpsI | GAGTC | 4 cut(s) | 243, 1540, 1555, 1862 |
| Psp124BI | GAGCTC | 2 cut(s) | 453, 2001 |
| Psp1406I | AACGTT | 1 cut(s) | 1755 |
| Psp6I | CCWGG | 2 cut(s) | 649, 2048 |
| PspGI | CCWGG | 2 cut(s) | 649, 2048 |
| PspN4I | GGNNCC | 4 cut(s) | 80, 211, 858, 1929 |
| PspPI | GGNCC | 2 cut(s) | 78, 377 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 510, 542 |
| PstI | CTGCAG | 2 cut(s) | 577, 1201 |
| PstNI | CAGNNNCTG | 3 cut(s) | 566, 925, 988 |
| PsuI | RGATCY | 5 cut(s) | 552, 1012, 1282, 1294, 1955 |
| PsyI | GACNNNGTC | 1 cut(s) | 163 |
| PvuI | CGATCG | 1 cut(s) | 304 |
| PvuII | CAGCTG | 1 cut(s) | 2039 |
| RsaI | GTAC | 3 cut(s) | 642, 657, 1313 |
| RsaNI | GTAC | 3 cut(s) | 641, 656, 1312 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1429, 1739 |
| SacI | GAGCTC | 2 cut(s) | 453, 2001 |
| SapI | GCTCTTC | 1 cut(s) | 294 |
| SaqAI | TTAA | 8 cut(s) | 425, 636, 728, 1089, 1226, 1692, 1814, 2028 |
| SatI | GCNGC | 6 cut(s) | 85, 105, 345, 573, 576, 663 |
| Sau96I | GGNCC | 2 cut(s) | 78, 377 |
| SchI | GAGTC | 4 cut(s) | 243, 1541, 1556, 1862 |
| ScrFI | CCNGG | 4 cut(s) | 651, 1022, 1023, 2050 |
| SduI | GDGCHC | 2 cut(s) | 453, 2001 |
| SfaNI | GCATC | 4 cut(s) | 89, 773, 1588, 1693 |
| SfcI | CTRYAG | 5 cut(s) | 254, 567, 573, 790, 1197 |
| SfoI | GGCGCC | 1 cut(s) | 211 |
| SfuI | TTCGAA | 1 cut(s) | 1357 |
| SinI | GGWCC | 1 cut(s) | 377 |
| SmaI | CCCGGG | 1 cut(s) | 1023 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1429, 1739 |
| SmlI | CTYRAG | 2 cut(s) | 1472, 1813 |
| SmoI | CTYRAG | 2 cut(s) | 1472, 1813 |
| SseBI | AGGCCT | 1 cut(s) | 649 |
| SspDI | GGCGCC | 1 cut(s) | 209 |
| SspI | AATATT | 1 cut(s) | 1270 |
| SspMI | CTAG | 6 cut(s) | 603, 698, 1298, 1440, 1529, 1608 |
| SstI | GAGCTC | 2 cut(s) | 453, 2001 |
| StuI | AGGCCT | 1 cut(s) | 649 |
| StyD4I | CCNGG | 4 cut(s) | 649, 1020, 1021, 2048 |
| StyI | CCWWGG | 4 cut(s) | 180, 1161, 1430, 1722 |
| TaaI | ACNGT | 5 cut(s) | 459, 1142, 1576, 1738, 1895 |
| TaiI | ACGT | 2 cut(s) | 1758, 1828 |
| TaqI | TCGA | 7 cut(s) | 153, 300, 415, 469, 753, 1357, 1555 |
| TaqII | GACCGA | 1 cut(s) | 1469 |
| TatI | WGTACW | 3 cut(s) | 640, 655, 1311 |
| TauI | GCSGC | 2 cut(s) | 87, 107 |
| TfiI | GAWTC | 3 cut(s) | 1727, 1906, 2009 |
| Tru1I | TTAA | 8 cut(s) | 425, 636, 728, 1089, 1226, 1692, 1814, 2028 |
| Tru9I | TTAA | 8 cut(s) | 425, 636, 728, 1089, 1226, 1692, 1814, 2028 |
| TscAI | CASTG | 3 cut(s) | 462, 739, 1741 |
| TseFI | GTSAC | 1 cut(s) | 265 |
| TseI | GCWGC | 4 cut(s) | 344, 572, 575, 662 |
| Tsp45I | GTSAC | 1 cut(s) | 265 |
| TspDTI | ATGAA | 8 cut(s) | 100, 207, 286, 504, 771, 1767, 1812, 1931 |
| TspMI | CCCGGG | 1 cut(s) | 1021 |
| TspRI | CASTG | 3 cut(s) | 462, 739, 1741 |
| Tth111I | GACNNNGTC | 1 cut(s) | 163 |
| Vha464I | CTTAAG | 1 cut(s) | 1813 |
| VpaK11BI | GGWCC | 1 cut(s) | 377 |
| XapI | RAATTY | 4 cut(s) | 1085, 1316, 1322, 1685 |
| XbaI | TCTAGA | 1 cut(s) | 1528 |
| XmaI | CCCGGG | 1 cut(s) | 1021 |
| XspI | CTAG | 6 cut(s) | 603, 698, 1298, 1440, 1529, 1608 |