Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009372

Physical Location & Seq

Genomic Coordinates Reverse (-)

37731760 .. 37745716

Gene Structure 13957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00195430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCTTCTTCGCCTTCCTTCACCTTCTCTCTCTTCTCTCCTTTCCACTCCCACTCCCACGCCCAAACCCTCTCGATTCTCTCCGGCTCGGCCCCGCCGCTCGCTTTTCCGATGCGCCGCCCTCAAAAACGACGTCGACATCGACGCCTTCACCGCCAAGTCCGGCTACCTCTTCGAGCTCAGCGCGTCGGAGGCCAACTCCTTGGCCGACTATGATATCTCCAAAATCGGCGCCATCTACCGCCGGAAGCCTCTCGTTGTTTTCCGTCGACTCCTACAGATCGCCCTCACTTTCGGCTACTGGTTTGCGCTTCGCTTCATTGATGCTCAAATGGAACGCTCCGACCAAATGTTCGAGGTTAGAGCTACTGAGCTTCGGCAAATACTGGTAGAACTTGGACCGGCGTATATCAAAATCGCTCAGGCTATTTCGTCTCGACCTGACTTGATACCACCATCATACGTGGATGAACTCTCACTGTTGCAAGATCAAATATCTCCATTTTCTAATGAAGATGCTATAAAGACAATAGAAAATGAACTTGCTTTACCAATAGACGAGCTTTTCTCTGAGATCTCACCAGAACCTGTAGCTGCAGCTTCTCTTGGACAGGTGTATCAAGCTAGGCTTCGCCGTAGGGGACAGCTTGTTGCAGTTAAAGTACAAAGGCCTGGAGTACAAGCTGCTATTTCCTTAGACATATTGATCTTGCGTTCTCTAGCAGGTCTTCTCAGGAGAATAAGAAAATTAAACACTGATCTTCAGGCAGTTGTTGATGAATGGGCATCAAGTCTCTTTCGGGAGATGGACTACAGGAAGGAAGCAAATAATGGTATCAAGTTCAGACAGTTATATGGTGGTATACCTGATGTTTTGGTTCCAGAAATGTATCTGGAACACACAACTCGTAGGGTGCTTGTGATGGAGTGGGTGGAGGGACAGAAGCTGTCAGAAATGAATGATCTTTACTTGGTGGAGGTTGGGACTTACTGCTCTTTCAATCAGCTTCTGGAATGTGGTTTCTATCATGCAGATCCACACCCTGGAAACCTTCTTCGCACATATGATGGAAAACTTGCTTATTTAGATTTTGGTATGATGGGTGAATTTAAAGAAGAACTCCGCAATGGATTCATTGAAGCTTCACTCCATCTTGTAAACCGCGATTTTGGTGCATTGGCCAAGGACTTTGTTACTCTTGGGTTTATTCCACCAACTGCAGACAAGGAAGCTGTTACAAAGGCTTTAACAGGTGTCTTTCAGAATGCTGTTGCCAAAGGAGTGAGCAATATTAGCTTCGGAGACCTCTTAGGAGATCTAGGAACTACCATGTACAAATTCAAATTTCGCATACCTTCTTATTTTTCTCTCGTCATTCGAAGTCTTGCTGTTCTGGAAGGTGTTGCTATTGGCTCCAACCCAGATTACAAGGTTTTAGGTAGCACATACCCATGGATTGCTAGGAAAATACTGACCGACAACTCACCTCAACTCAAGTCTTCCCTGCAGGCCCTTCTTTATGAGATTATGCCTATTCAGGAAGGTGTATTCAGAATTGATCGTCTAGAGTCTCTATTTGCAGAGTCCCTCCGAGCCAAAACAGAGAAACCTATGGTTGGAAAACAAGATGATGATGCTAATTCTAGGGTATTTATCAAGCAAATCCTTTCTTTTTTGTTAACAGAGAAGGGTGCATTTGTGAAGGATATACTTCTTCAAGAATTTGTTAAGGGATTGGATGCACTTGGGCTGGCAACCTTGGATTCTCTCACTACTGTGGCTACTACAAATGTTCCACTCATTGCTCCCTTTTCATTCTCTACAATGACGAATGAAGACAAGATCAACTTAAGAACCCTACGTCGCCTTCTGCTATTGCTGTCAGGTTCTCAGAGAAATGAAAACTCAAAAGCAGTGATTAGAGAGGATGGTCCATACGAGACTCAGCAAATGAACTTGGCGGAACCATCATTAGTTTTCAATCAACTTGGATCCATTCAAGAAGTTCTACCTATCCTCTCTGTCATTCCGGAGCTCCCACCAGAATCACAACAGCAGTTACTTAATTTGCCAGCTGATCTCACTGGACGTCTAATTTCCCGTGCCGTTGCAAGGACAATCAGAAGGGTAATTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

712

Amino Acids

79.7

Weight (kDa)

6.56

Isoelectric Point (pI)

43.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	161 - 395	5.7e-68	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71810
fragaria_vesca	FvH4_2g12660 FvH4_2g12660 FvH4_2g12660 FvH4_2g12660
malus_domestica	MD10G1042100.v1.1
prunus_persica	Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1
pyrus_communis	pycom10g02920
rosa_chinensis	RchiOBHm_Chr6g0273371
rosa_laevigata	RLG00000013622
rosa_multiflora	Rmu_sc0000239.1_g000003
rosa_roxburghii	Rroxscaffold_7G00195430
rosa_rugosa	Rorug06G0074300 Rorug06G0074400
rosa_samantha	Rh6AG189500 Rh6BG192900 Rh6CG192700 Rh6DG184200
rosa_wichuraiana	Rw6G016490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	135, 2092
Acc36I	ACCTGC	1 cut(s)	713
AccB1I	GGYRCC	1 cut(s)	230
AccB7I	CCANNNNNTGG	1 cut(s)	1043
AccBSI	CCGCTC	1 cut(s)	99
AccI	GTMKAC	3 cut(s)	135, 268, 862
AccII	CGCG	2 cut(s)	185, 1164
AccIII	TCCGGA	1 cut(s)	2029
AciI	CCGC	8 cut(s)	94, 97, 117, 153, 241, 1123, 1162, 1961
AclWI	GGATC	3 cut(s)	1028, 1986, 1999
AcoI	YGGCCR	2 cut(s)	204, 1179
AcsI	RAATTY	4 cut(s)	1106, 1337, 1343, 1721
AcuI	CTGAAG	1 cut(s)	746
AcyI	GRCGYC	4 cut(s)	132, 144, 231, 2089
AfaI	GTAC	3 cut(s)	663, 678, 1334
AfiI	CCNNNNNNNGG	3 cut(s)	1043, 1616, 2112
AflII	CTTAAG	1 cut(s)	1849
AgsI	TTSAA	6 cut(s)	1000, 1139, 1342, 1718, 1981, 2000
AjnI	CCWGG	2 cut(s)	670, 1042
AleI	CACNNNNGTG	1 cut(s)	1775
Alw21I	GWGCWC	2 cut(s)	180, 2037
Alw26I	GTCTC	5 cut(s)	438, 797, 1296, 1575, 1934
AlwI	GGATC	3 cut(s)	1028, 1986, 1999
AlwNI	CAGNNNCTG	3 cut(s)	587, 946, 1009
Aor13HI	TCCGGA	1 cut(s)	2029
AoxI	GGCC	6 cut(s)	89, 192, 204, 668, 1179, 1509
ApeKI	GCWGC	3 cut(s)	593, 596, 683
ApoI	RAATTY	4 cut(s)	1106, 1337, 1343, 1721
ArsI	GACNNNNNNTTYG	4 cut(s)	117, 149, 335, 367
AspLEI	GCGC	4 cut(s)	116, 185, 233, 310
AspS9I	GGNCC	4 cut(s)	90, 398, 1510, 1931
AsuHPI	GGTGA	5 cut(s)	12, 142, 570, 1115, 1476
AsuII	TTCGAA	1 cut(s)	1378
AvaII	GGWCC	2 cut(s)	398, 1931
BaeI	ACNNNNGTAYC	2 cut(s)	599, 632
BalI	TGGCCA	1 cut(s)	1181
BamHI	GGATCC	1 cut(s)	1991
BanI	GGYRCC	1 cut(s)	230
BanII	GRGCYC	2 cut(s)	180, 2037
BbsI	GAAGAC	3 cut(s)	719, 1491, 1842
Bbv12I	GWGCWC	2 cut(s)	180, 2037
BbvI	GCAGC	3 cut(s)	580, 608, 670
BccI	CCATC	9 cut(s)	242, 463, 799, 916, 1061, 1093, 1158, 1922, 1975
BceAI	ACGGC	2 cut(s)	618, 2090
BcgI	CGANNNNNNTGC	2 cut(s)	1154, 1188
BciT130I	CCWGG	2 cut(s)	672, 1044
BcoDI	GTCTC	5 cut(s)	438, 797, 1296, 1575, 1934
BfaI	CTAG	6 cut(s)	624, 719, 1319, 1461, 1565, 1644
BfmI	CTRYAG	6 cut(s)	275, 588, 594, 811, 1218, 1505
BfoI	RGCGCY	1 cut(s)	234
BfrI	CTTAAG	1 cut(s)	1849
BfuAI	ACCTGC	1 cut(s)	713
BglII	AGATCT	2 cut(s)	573, 1315
BisI	GCNGC	5 cut(s)	97, 117, 594, 597, 684
BlpI	GCTNAGC	1 cut(s)	179
BlsI	GCNGC	5 cut(s)	98, 118, 595, 598, 685
Bme1390I	CCNGG	2 cut(s)	672, 1044
Bme18I	GGWCC	2 cut(s)	398, 1931
BmgT120I	GGNCC	4 cut(s)	90, 398, 1510, 1931
BmiI	GGNNCC	6 cut(s)	92, 232, 879, 1414, 1965, 1993
BmrFI	CCNGG	2 cut(s)	672, 1044
BmsI	GCATC	6 cut(s)	101, 313, 505, 794, 1624, 1729
BpiI	GAAGAC	3 cut(s)	719, 1491, 1842
BplI	GAGNNNNNCTC	4 cut(s)	182, 214, 551, 583
BpmI	CTGGAG	1 cut(s)	693
Bpu10I	CCTNAGC	1 cut(s)	420
Bpu1102I	GCTNAGC	1 cut(s)	179
Bpu14I	TTCGAA	1 cut(s)	1378
BpuEI	CTTGAG	1 cut(s)	1478
BsaAI	YACGTR	1 cut(s)	463
BsaHI	GRCGYC	4 cut(s)	132, 144, 231, 2089
BsaI	GGTCTC	1 cut(s)	1296
BsaJI	CCNNGG	5 cut(s)	201, 1042, 1182, 1451, 1758
BsaWI	WCCGGW	1 cut(s)	2029
BsaXI	ACNNNNNCTCC	2 cut(s)	37, 67
Bsc4I	CCNNNNNNNGG	3 cut(s)	1043, 1616, 2112
Bse118I	RCCGGY	1 cut(s)	400
Bse1I	ACTGG	3 cut(s)	305, 390, 2089
Bse3DI	GCAATG	2 cut(s)	1132, 1800
BseAI	TCCGGA	1 cut(s)	2029
BseBI	CCWGG	2 cut(s)	672, 1044
BseDI	CCNNGG	5 cut(s)	201, 1042, 1182, 1451, 1758
BseGI	GGATG	3 cut(s)	472, 1744, 1933
BseLI	CCNNNNNNNGG	3 cut(s)	1043, 1616, 2112
BseMI	GCAATG	2 cut(s)	1132, 1800
BseMII	CTCAG	7 cut(s)	193, 360, 434, 561, 745, 1904, 1958
BseNI	ACTGG	3 cut(s)	305, 390, 2089
BseXI	GCAGC	3 cut(s)	580, 608, 670
Bsh1236I	CGCG	2 cut(s)	185, 1164
BshFI	GGCC	6 cut(s)	91, 194, 206, 670, 1181, 1511
BshNI	GGYRCC	1 cut(s)	230
BsiHKAI	GWGCWC	2 cut(s)	180, 2037
BsiSI	CCGG	5 cut(s)	83, 162, 244, 401, 2030
BslFI	GGGAC	4 cut(s)	654, 951, 997, 1570
BslI	CCNNNNNNNGG	3 cut(s)	1043, 1616, 2112
BsmAI	GTCTC	5 cut(s)	438, 797, 1296, 1575, 1934
BsmBI	CGTCTC	1 cut(s)	438
BsmFI	GGGAC	4 cut(s)	654, 951, 997, 1570
BsmI	GAATGC	1 cut(s)	1270
BsnI	GGCC	6 cut(s)	91, 194, 206, 670, 1181, 1511
Bso31I	GGTCTC	1 cut(s)	1296
Bsp119I	TTCGAA	1 cut(s)	1378
Bsp1286I	GDGCHC	2 cut(s)	180, 2037
Bsp13I	TCCGGA	1 cut(s)	2029
Bsp1407I	TGTACA	1 cut(s)	1332
Bsp1720I	GCTNAGC	1 cut(s)	179
Bsp19I	CCATGG	1 cut(s)	1451
BspACI	CCGC	8 cut(s)	94, 97, 117, 153, 241, 1123, 1162, 1961
BspANI	GGCC	6 cut(s)	91, 194, 206, 670, 1181, 1511
BspCNI	CTCAG	7 cut(s)	192, 361, 433, 562, 744, 1903, 1957
BspEI	TCCGGA	1 cut(s)	2029
BspFNI	CGCG	2 cut(s)	185, 1164
BspHI	TCATGA	1 cut(s)	2135
BspLI	GGNNCC	6 cut(s)	92, 232, 879, 1414, 1965, 1993
BspMAI	CTGCAG	3 cut(s)	598, 1222, 1509
BspMI	ACCTGC	1 cut(s)	713
BspPI	GGATC	3 cut(s)	1028, 1986, 1999
BspT104I	TTCGAA	1 cut(s)	1378
BspT107I	GGYRCC	1 cut(s)	230
BspTI	CTTAAG	1 cut(s)	1849
BspTNI	GGTCTC	1 cut(s)	1296
BsrBI	CCGCTC	1 cut(s)	99
BsrDI	GCAATG	2 cut(s)	1132, 1800
BsrFI	RCCGGY	1 cut(s)	400
BsrGI	TGTACA	1 cut(s)	1332
BsrI	ACTGG	3 cut(s)	305, 390, 2089
BssAI	RCCGGY	1 cut(s)	400
BssECI	CCNNGG	5 cut(s)	201, 1042, 1182, 1451, 1758
BssNAI	GTATAC	1 cut(s)	863
BssNI	GRCGYC	4 cut(s)	132, 144, 231, 2089
BssT1I	CCWWGG	4 cut(s)	201, 1182, 1451, 1758
Bst1107I	GTATAC	1 cut(s)	863
Bst2UI	CCWGG	2 cut(s)	672, 1044
Bst4CI	ACNGT	3 cut(s)	480, 849, 1777
Bst6I	CTCTTC	2 cut(s)	37, 176
BstACI	GRCGYC	4 cut(s)	132, 144, 231, 2089
BstAFI	CTTAAG	1 cut(s)	1849
BstAUI	TGTACA	1 cut(s)	1332
BstBAI	YACGTR	1 cut(s)	463
BstBI	TTCGAA	1 cut(s)	1378
BstC8I	GCNNGC	4 cut(s)	101, 1509, 1752, 2073
BstDEI	CTNAG	9 cut(s)	179, 369, 420, 570, 694, 731, 1309, 1890, 1944
BstDSI	CCRYGG	1 cut(s)	1451
BstF5I	GGATG	3 cut(s)	472, 1744, 1933
BstFNI	CGCG	2 cut(s)	185, 1164
BstH2I	RGCGCY	1 cut(s)	234
BstHHI	GCGC	4 cut(s)	116, 185, 233, 310
BstMAI	GTCTC	5 cut(s)	438, 797, 1296, 1575, 1934
BstMWI	GCNNNNNNNGC	3 cut(s)	152, 191, 1293
BstNI	CCWGG	2 cut(s)	672, 1044
BstSCI	CCNGG	2 cut(s)	670, 1042
BstSFI	CTRYAG	6 cut(s)	275, 588, 594, 811, 1218, 1505
BstUI	CGCG	2 cut(s)	185, 1164
BstV1I	GCAGC	3 cut(s)	580, 608, 670
BstV2I	GAAGAC	3 cut(s)	719, 1491, 1842
BstX2I	RGATCY	4 cut(s)	573, 1033, 1315, 1991
BstXI	CCANNNNNNTGG	1 cut(s)	202
BstYI	RGATCY	4 cut(s)	573, 1033, 1315, 1991
BstZ17I	GTATAC	1 cut(s)	863
BsuRI	GGCC	6 cut(s)	91, 194, 206, 670, 1181, 1511
BtgI	CCRYGG	1 cut(s)	1451
BtsCI	GGATG	3 cut(s)	472, 1744, 1933
BtsI	GCAGTG	1 cut(s)	1920
BtsIMutI	CAGTG	4 cut(s)	476, 753, 1920, 2082
BveI	ACCTGC	1 cut(s)	713
Cac8I	GCNNGC	4 cut(s)	101, 1509, 1752, 2073
CaiI	CAGNNNCTG	3 cut(s)	587, 946, 1009
CciI	TCATGA	1 cut(s)	2135
CfoI	GCGC	4 cut(s)	116, 185, 233, 310
Cfr10I	RCCGGY	1 cut(s)	400
Cfr13I	GGNCC	4 cut(s)	90, 398, 1510, 1931
CseI	GACGC	2 cut(s)	152, 174
Csp6I	GTAC	3 cut(s)	662, 677, 1333
CviAII	CATG	4 cut(s)	1028, 1330, 1452, 2136
CviQI	GTAC	3 cut(s)	662, 677, 1333
DdeI	CTNAG	9 cut(s)	179, 369, 420, 570, 694, 731, 1309, 1890, 1944
DinI	GGCGCC	1 cut(s)	232
DraI	TTTAAA	1 cut(s)	1111
EaeI	YGGCCR	2 cut(s)	204, 1179
Eam1104I	CTCTTC	2 cut(s)	37, 176
EarI	CTCTTC	2 cut(s)	37, 176
EciI	GGCGGA	1 cut(s)	1976
Ecl136II	GAGCTC	2 cut(s)	178, 2035
Eco130I	CCWWGG	4 cut(s)	201, 1182, 1451, 1758
Eco147I	AGGCCT	1 cut(s)	670
Eco24I	GRGCYC	2 cut(s)	180, 2037
Eco31I	GGTCTC	1 cut(s)	1296
Eco32I	GATATC	1 cut(s)	217
Eco47I	GGWCC	2 cut(s)	398, 1931
Eco53kI	GAGCTC	2 cut(s)	178, 2035
Eco57I	CTGAAG	1 cut(s)	746
EcoICRI	GAGCTC	2 cut(s)	178, 2035
EcoO109I	RGGNCCY	1 cut(s)	1510
EcoRII	CCWGG	2 cut(s)	670, 1042
EcoRV	GATATC	1 cut(s)	217
EcoT14I	CCWWGG	4 cut(s)	201, 1182, 1451, 1758
EcoT38I	GRGCYC	2 cut(s)	180, 2037
EgeI	GGCGCC	1 cut(s)	232
EheI	GGCGCC	1 cut(s)	232
ErhI	CCWWGG	4 cut(s)	201, 1182, 1451, 1758
Esp3I	CGTCTC	1 cut(s)	438
FaeI	CATG	4 cut(s)	1031, 1333, 1455, 2139
FalI	AAGNNNNNCTT	4 cut(s)	612, 644, 1832, 1864
FaqI	GGGAC	4 cut(s)	654, 951, 997, 1570
FatI	CATG	4 cut(s)	1027, 1329, 1451, 2135
FauI	CCCGC	1 cut(s)	101
FauNDI	CATATG	1 cut(s)	1063
FblI	GTMKAC	3 cut(s)	135, 268, 862
Fnu4HI	GCNGC	5 cut(s)	97, 117, 594, 597, 684
FokI	GGATG	3 cut(s)	479, 1751, 1940
FriOI	GRGCYC	2 cut(s)	180, 2037
Fsp4HI	GCNGC	5 cut(s)	97, 117, 594, 597, 684
FspBI	CTAG	6 cut(s)	624, 719, 1319, 1461, 1565, 1644
GlaI	GCGC	4 cut(s)	115, 184, 232, 309
GluI	GCNGC	5 cut(s)	97, 117, 594, 597, 684
GsuI	CTGGAG	1 cut(s)	693
HaeII	RGCGCY	1 cut(s)	234
HaeIII	GGCC	6 cut(s)	91, 194, 206, 670, 1181, 1511
HapII	CCGG	5 cut(s)	83, 162, 244, 401, 2030
HgaI	GACGC	2 cut(s)	152, 174
HhaI	GCGC	4 cut(s)	116, 185, 233, 310
Hin1I	GRCGYC	4 cut(s)	132, 144, 231, 2089
Hin1II	CATG	4 cut(s)	1031, 1333, 1455, 2139
Hin6I	GCGC	4 cut(s)	114, 183, 231, 308
HinP1I	GCGC	4 cut(s)	114, 183, 231, 308
HincII	GTYRAC	3 cut(s)	136, 269, 1680
HindII	GTYRAC	3 cut(s)	136, 269, 1680
HindIII	AAGCTT	1 cut(s)	1140
HinfI	GANTC	8 cut(s)	75, 270, 1131, 1568, 1583, 1763, 1942, 2045
HpaI	GTTAAC	1 cut(s)	1680
HpaII	CCGG	5 cut(s)	83, 162, 244, 401, 2030
HphI	GGTGA	5 cut(s)	12, 142, 570, 1115, 1476
Hpy166II	GTNNAC	5 cut(s)	136, 269, 863, 1159, 1680
Hpy8I	GTNNAC	5 cut(s)	136, 269, 863, 1159, 1680
Hpy99I	CGWCG	6 cut(s)	134, 137, 146, 190, 270, 1866
HpyCH4III	ACNGT	3 cut(s)	480, 849, 1777
HpyCH4IV	ACGT	4 cut(s)	132, 462, 1861, 2089
HpyF10VI	GCNNNNNNNGC	3 cut(s)	152, 191, 1293
HpyF3I	CTNAG	9 cut(s)	179, 369, 420, 570, 694, 731, 1309, 1890, 1944
HpySE526I	ACGT	4 cut(s)	132, 462, 1861, 2089
Hsp92I	GRCGYC	4 cut(s)	132, 144, 231, 2089
Hsp92II	CATG	4 cut(s)	1031, 1333, 1455, 2139
HspAI	GCGC	4 cut(s)	114, 183, 231, 308
KasI	GGCGCC	1 cut(s)	230
Kpn2I	TCCGGA	1 cut(s)	2029
KspAI	GTTAAC	1 cut(s)	1680
LmnI	GCTCC	5 cut(s)	344, 1418, 1810, 2032, 2040
Lsp1109I	GCAGC	3 cut(s)	580, 608, 670
LweI	GCATC	6 cut(s)	101, 313, 505, 794, 1624, 1729
MaeI	CTAG	6 cut(s)	624, 719, 1319, 1461, 1565, 1644
MaeII	ACGT	4 cut(s)	132, 462, 1861, 2089
MaeIII	GTNAC	3 cut(s)	1192, 1234, 2058
MbiI	CCGCTC	1 cut(s)	99
MflI	RGATCY	4 cut(s)	573, 1033, 1315, 1991
MhlI	GDGCHC	2 cut(s)	180, 2037
MlsI	TGGCCA	1 cut(s)	1181
MluNI	TGGCCA	1 cut(s)	1181
Mly113I	GGCGCC	1 cut(s)	231
MlyI	GAGTC	4 cut(s)	264, 1577, 1592, 1936
MmeI	TCCRAC	4 cut(s)	168, 366, 1440, 1597
Mox20I	TGGCCA	1 cut(s)	1181
MroI	TCCGGA	1 cut(s)	2029
MscI	TGGCCA	1 cut(s)	1181
MseI	TTAA	8 cut(s)	657, 749, 1110, 1247, 1679, 1728, 1850, 2064
MslI	CAYNNNNRTG	2 cut(s)	1450, 1775
Msp20I	TGGCCA	1 cut(s)	1181
MspA1I	CMGCKG	1 cut(s)	2075
MspCI	CTTAAG	1 cut(s)	1849
MspI	CCGG	5 cut(s)	83, 162, 244, 401, 2030
MspR9I	CCNGG	2 cut(s)	672, 1044
Mva1269I	GAATGC	1 cut(s)	1270
MvaI	CCWGG	2 cut(s)	672, 1044
MvnI	CGCG	2 cut(s)	185, 1164
MwoI	GCNNNNNNNGC	3 cut(s)	152, 191, 1293
NarI	GGCGCC	1 cut(s)	231
NcoI	CCATGG	1 cut(s)	1451
NdeI	CATATG	1 cut(s)	1063
NlaIII	CATG	4 cut(s)	1031, 1333, 1455, 2139
NlaIV	GGNNCC	6 cut(s)	92, 232, 879, 1414, 1965, 1993
NmeAIII	GCCGAG	1 cut(s)	67
NspV	TTCGAA	1 cut(s)	1378
OliI	CACNNNNGTG	1 cut(s)	1775
PagI	TCATGA	1 cut(s)	2135
PceI	AGGCCT	1 cut(s)	670
PcsI	WCGNNNNNNNCGW	1 cut(s)	138
PctI	GAATGC	1 cut(s)	1270
PfeI	GAWTC	4 cut(s)	75, 1131, 1763, 2045
PflMI	CCANNNNNTGG	1 cut(s)	1043
PkrI	GCNGC	5 cut(s)	98, 118, 595, 598, 685
PleI	GAGTC	4 cut(s)	264, 1576, 1591, 1936
PluTI	GGCGCC	1 cut(s)	234
PpsI	GAGTC	4 cut(s)	264, 1576, 1591, 1936
Ppu21I	YACGTR	1 cut(s)	463
Psp124BI	GAGCTC	2 cut(s)	180, 2037
Psp6I	CCWGG	2 cut(s)	670, 1042
PspGI	CCWGG	2 cut(s)	670, 1042
PspN4I	GGNNCC	6 cut(s)	92, 232, 879, 1414, 1965, 1993
PspPI	GGNCC	4 cut(s)	90, 398, 1510, 1931
PsrI	GAACNNNNNNTAC	2 cut(s)	531, 563
PstI	CTGCAG	3 cut(s)	598, 1222, 1509
PstNI	CAGNNNCTG	3 cut(s)	587, 946, 1009
PsuI	RGATCY	4 cut(s)	573, 1033, 1315, 1991
PvuII	CAGCTG	1 cut(s)	2075
RsaI	GTAC	3 cut(s)	663, 678, 1334
RsaNI	GTAC	3 cut(s)	662, 677, 1333
RseI	CAYNNNNRTG	2 cut(s)	1450, 1775
SacI	GAGCTC	2 cut(s)	180, 2037
SalI	GTCGAC	2 cut(s)	134, 267
SaqAI	TTAA	8 cut(s)	657, 749, 1110, 1247, 1679, 1728, 1850, 2064
SatI	GCNGC	5 cut(s)	97, 117, 594, 597, 684
Sau96I	GGNCC	4 cut(s)	90, 398, 1510, 1931
SbfI	CCTGCAGG	1 cut(s)	1509
SchI	GAGTC	4 cut(s)	264, 1577, 1592, 1936
ScrFI	CCNGG	2 cut(s)	672, 1044
SdaI	CCTGCAGG	1 cut(s)	1509
SduI	GDGCHC	2 cut(s)	180, 2037
SfaNI	GCATC	6 cut(s)	101, 313, 505, 794, 1624, 1729
SfcI	CTRYAG	6 cut(s)	275, 588, 594, 811, 1218, 1505
SfoI	GGCGCC	1 cut(s)	232
SfuI	TTCGAA	1 cut(s)	1378
SinI	GGWCC	2 cut(s)	398, 1931
SmiMI	CAYNNNNRTG	2 cut(s)	1450, 1775
SmlI	CTYRAG	2 cut(s)	1493, 1849
SmoI	CTYRAG	2 cut(s)	1493, 1849
Sse8387I	CCTGCAGG	1 cut(s)	1509
SseBI	AGGCCT	1 cut(s)	670
SsiI	CCGC	8 cut(s)	94, 97, 117, 153, 241, 1123, 1162, 1961
SspDI	GGCGCC	1 cut(s)	230
SspI	AATATT	1 cut(s)	1291
SspMI	CTAG	6 cut(s)	624, 719, 1319, 1461, 1565, 1644
SstI	GAGCTC	2 cut(s)	180, 2037
StuI	AGGCCT	1 cut(s)	670
StyD4I	CCNGG	2 cut(s)	670, 1042
StyI	CCWWGG	4 cut(s)	201, 1182, 1451, 1758
TaaI	ACNGT	3 cut(s)	480, 849, 1777
TaiI	ACGT	4 cut(s)	135, 465, 1864, 2092
TaqI	TCGA	8 cut(s)	73, 135, 141, 174, 268, 354, 436, 1378
TaqII	GACCGA	1 cut(s)	1490
TatI	WGTACW	3 cut(s)	661, 676, 1332
TauI	GCSGC	2 cut(s)	99, 119
TfiI	GAWTC	4 cut(s)	75, 1131, 1763, 2045
Tru1I	TTAA	8 cut(s)	657, 749, 1110, 1247, 1679, 1728, 1850, 2064
Tru9I	TTAA	8 cut(s)	657, 749, 1110, 1247, 1679, 1728, 1850, 2064
TscAI	CASTG	4 cut(s)	483, 760, 1920, 2089
TseI	GCWGC	3 cut(s)	593, 596, 683
TspGWI	ACGGA	1 cut(s)	254
TspRI	CASTG	4 cut(s)	483, 760, 1920, 2089
Van91I	CCANNNNNTGG	1 cut(s)	1043
Vha464I	CTTAAG	1 cut(s)	1849
VpaK11BI	GGWCC	2 cut(s)	398, 1931
XapI	RAATTY	4 cut(s)	1106, 1337, 1343, 1721
XbaI	TCTAGA	1 cut(s)	1564
XmiI	GTMKAC	3 cut(s)	135, 268, 862
XspI	CTAG	6 cut(s)	624, 719, 1319, 1461, 1565, 1644
ZraI	GACGTC	2 cut(s)	133, 2090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.