AarF domain-containing protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G71810 |
| fragaria_vesca | FvH4_2g12660 FvH4_2g12660 FvH4_2g12660 FvH4_2g12660 |
| malus_domestica | MD10G1042100.v1.1 |
| prunus_persica | Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 |
| pyrus_communis | pycom10g02920 |
| rosa_chinensis | RchiOBHm_Chr6g0273371 |
| rosa_laevigata | RLG00000013622 |
| rosa_multiflora | Rmu_sc0000239.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00195430 |
| rosa_rugosa | Rorug06G0074300 Rorug06G0074400 |
| rosa_samantha | Rh6AG189500 Rh6BG192900 Rh6CG192700 Rh6DG184200 |
| rosa_wichuraiana | Rw6G016490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 520, 824 |
| AccB1I | GGYRCC | 2 cut(s) | 341, 1523 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1154 |
| AccBSI | CCGCTC | 1 cut(s) | 210 |
| AccI | GTMKAC | 4 cut(s) | 252, 838, 973, 1462 |
| AccII | CGCG | 1 cut(s) | 419 |
| AciI | CCGC | 6 cut(s) | 208, 228, 355, 362, 707, 1234 |
| AclWI | GGATC | 3 cut(s) | 1139, 2215, 2237 |
| AcsI | RAATTY | 6 cut(s) | 9, 32, 950, 1217, 1454, 1823 |
| AcuI | CTGAAG | 1 cut(s) | 857 |
| AcyI | GRCGYC | 4 cut(s) | 255, 342, 1512, 1524 |
| AfaI | GTAC | 8 cut(s) | 495, 748, 789, 1171, 1445, 1555, 1559, 1581 |
| AfeI | AGCGCT | 1 cut(s) | 449 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 351, 721, 1154 |
| AflII | CTTAAG | 1 cut(s) | 1951 |
| AjnI | CCWGG | 1 cut(s) | 1153 |
| Alw21I | GWGCWC | 4 cut(s) | 291, 585, 1605, 2139 |
| Alw26I | GTCTC | 5 cut(s) | 401, 908, 950, 1407, 1686 |
| AlwI | GGATC | 3 cut(s) | 1139, 2215, 2237 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1057 |
| Aor51HI | AGCGCT | 1 cut(s) | 449 |
| AoxI | GGCC | 5 cut(s) | 359, 534, 779, 1695, 1988 |
| ApeKI | GCWGC | 7 cut(s) | 476, 499, 704, 794, 2155, 2207, 2210 |
| ApoI | RAATTY | 6 cut(s) | 9, 32, 950, 1217, 1454, 1823 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 446, 478 |
| AseI | ATTAAT | 1 cut(s) | 2195 |
| AspLEI | GCGC | 4 cut(s) | 227, 344, 450, 1526 |
| AspS9I | GGNCC | 4 cut(s) | 509, 780, 1696, 1988 |
| AsuC2I | CCSGG | 1 cut(s) | 783 |
| AsuHPI | GGTGA | 4 cut(s) | 102, 391, 1226, 1587 |
| AsuII | TTCGAA | 1 cut(s) | 1489 |
| AvaII | GGWCC | 1 cut(s) | 509 |
| BanI | GGYRCC | 2 cut(s) | 341, 1523 |
| BanII | GRGCYC | 4 cut(s) | 291, 585, 1605, 2139 |
| BauI | CACGAG | 1 cut(s) | 2202 |
| BbsI | GAAGAC | 3 cut(s) | 324, 1602, 1944 |
| Bbv12I | GWGCWC | 4 cut(s) | 291, 585, 1605, 2139 |
| BbvI | GCAGC | 7 cut(s) | 463, 486, 691, 781, 2167, 2194, 2197 |
| BccI | CCATC | 8 cut(s) | 545, 574, 910, 1027, 1172, 1204, 1269, 1526 |
| BciT130I | CCWGG | 1 cut(s) | 1155 |
| BcnI | CCSGG | 1 cut(s) | 783 |
| BcoDI | GTCTC | 5 cut(s) | 401, 908, 950, 1407, 1686 |
| BfaI | CTAG | 5 cut(s) | 653, 735, 830, 1572, 1676 |
| BfmI | CTRYAG | 5 cut(s) | 477, 618, 699, 922, 1329 |
| BfoI | RGCGCY | 3 cut(s) | 345, 451, 1527 |
| BfrI | CTTAAG | 1 cut(s) | 1951 |
| BfuAI | ACCTGC | 2 cut(s) | 520, 824 |
| BglII | AGATCT | 1 cut(s) | 684 |
| BmcAI | AGTACT | 2 cut(s) | 495, 1581 |
| Bme1390I | CCNGG | 2 cut(s) | 783, 1155 |
| Bme18I | GGWCC | 1 cut(s) | 509 |
| BmgT120I | GGNCC | 4 cut(s) | 509, 780, 1696, 1988 |
| BmiI | GGNNCC | 4 cut(s) | 343, 990, 1435, 1525 |
| BmrFI | CCNGG | 2 cut(s) | 783, 1155 |
| BmsI | GCATC | 6 cut(s) | 212, 292, 905, 1831, 2078, 2102 |
| BpiI | GAAGAC | 3 cut(s) | 324, 1602, 1944 |
| Bpu10I | CCTNAGC | 3 cut(s) | 531, 1293, 2133 |
| Bpu14I | TTCGAA | 1 cut(s) | 1489 |
| BpuEI | CTTGAG | 2 cut(s) | 1589, 1977 |
| BpuMI | CCSGG | 1 cut(s) | 783 |
| BsaAI | YACGTR | 1 cut(s) | 1557 |
| BsaHI | GRCGYC | 4 cut(s) | 255, 342, 1512, 1524 |
| BsaI | GGTCTC | 3 cut(s) | 401, 950, 1407 |
| BsaJI | CCNNGG | 4 cut(s) | 715, 1153, 1562, 1860 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 63, 93, 1215, 1245 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 351, 721, 1154 |
| Bse118I | RCCGGY | 1 cut(s) | 378 |
| Bse1I | ACTGG | 1 cut(s) | 397 |
| Bse3DI | GCAATG | 1 cut(s) | 1243 |
| BseBI | CCWGG | 1 cut(s) | 1155 |
| BseDI | CCNNGG | 4 cut(s) | 715, 1153, 1562, 1860 |
| BseGI | GGATG | 3 cut(s) | 583, 1846, 2093 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 351, 721, 1154 |
| BseMI | GCAATG | 1 cut(s) | 1243 |
| BseMII | CTCAG | 3 cut(s) | 304, 545, 2124 |
| BseNI | ACTGG | 1 cut(s) | 397 |
| BseRI | GAGGAG | 5 cut(s) | 105, 112, 115, 166, 169 |
| BseXI | GCAGC | 7 cut(s) | 463, 486, 691, 781, 2167, 2194, 2197 |
| Bsh1236I | CGCG | 1 cut(s) | 419 |
| BshFI | GGCC | 5 cut(s) | 361, 536, 781, 1697, 1990 |
| BshNI | GGYRCC | 2 cut(s) | 341, 1523 |
| BsiHKAI | GWGCWC | 4 cut(s) | 291, 585, 1605, 2139 |
| BsiSI | CCGG | 3 cut(s) | 231, 379, 783 |
| BslFI | GGGAC | 1 cut(s) | 1108 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 351, 721, 1154 |
| BsmAI | GTCTC | 5 cut(s) | 401, 908, 950, 1407, 1686 |
| BsmFI | GGGAC | 1 cut(s) | 1108 |
| BsmI | GAATGC | 1 cut(s) | 1381 |
| BsnI | GGCC | 5 cut(s) | 361, 536, 781, 1697, 1990 |
| Bso31I | GGTCTC | 3 cut(s) | 401, 950, 1407 |
| Bsp119I | TTCGAA | 1 cut(s) | 1489 |
| Bsp1286I | GDGCHC | 4 cut(s) | 291, 585, 1605, 2139 |
| Bsp1407I | TGTACA | 1 cut(s) | 1443 |
| Bsp19I | CCATGG | 1 cut(s) | 1562 |
| BspACI | CCGC | 6 cut(s) | 208, 228, 355, 362, 707, 1234 |
| BspANI | GGCC | 5 cut(s) | 361, 536, 781, 1697, 1990 |
| BspCNI | CTCAG | 3 cut(s) | 303, 544, 2125 |
| BspFNI | CGCG | 1 cut(s) | 419 |
| BspLI | GGNNCC | 4 cut(s) | 343, 990, 1435, 1525 |
| BspMAI | CTGCAG | 2 cut(s) | 481, 1333 |
| BspMI | ACCTGC | 2 cut(s) | 520, 824 |
| BspPI | GGATC | 3 cut(s) | 1139, 2215, 2237 |
| BspQI | GCTCTTC | 2 cut(s) | 389, 663 |
| BspT104I | TTCGAA | 1 cut(s) | 1489 |
| BspT107I | GGYRCC | 2 cut(s) | 341, 1523 |
| BspTI | CTTAAG | 1 cut(s) | 1951 |
| BspTNI | GGTCTC | 3 cut(s) | 401, 950, 1407 |
| BsrBI | CCGCTC | 1 cut(s) | 210 |
| BsrDI | GCAATG | 1 cut(s) | 1243 |
| BsrFI | RCCGGY | 1 cut(s) | 378 |
| BsrGI | TGTACA | 1 cut(s) | 1443 |
| BsrI | ACTGG | 1 cut(s) | 397 |
| BssAI | RCCGGY | 1 cut(s) | 378 |
| BssECI | CCNNGG | 4 cut(s) | 715, 1153, 1562, 1860 |
| BssNAI | GTATAC | 2 cut(s) | 974, 1463 |
| BssNI | GRCGYC | 4 cut(s) | 255, 342, 1512, 1524 |
| BssSI | CACGAG | 1 cut(s) | 2202 |
| BssT1I | CCWWGG | 3 cut(s) | 715, 1562, 1860 |
| Bst1107I | GTATAC | 2 cut(s) | 974, 1463 |
| Bst2BI | CACGAG | 1 cut(s) | 2202 |
| Bst2UI | CCWGG | 1 cut(s) | 1155 |
| Bst4CI | ACNGT | 4 cut(s) | 591, 1274, 1899, 1983 |
| Bst6I | CTCTTC | 4 cut(s) | 175, 287, 389, 663 |
| BstACI | GRCGYC | 4 cut(s) | 255, 342, 1512, 1524 |
| BstAFI | CTTAAG | 1 cut(s) | 1951 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 496 |
| BstAUI | TGTACA | 1 cut(s) | 1443 |
| BstBAI | YACGTR | 1 cut(s) | 1557 |
| BstBI | TTCGAA | 1 cut(s) | 1489 |
| BstC8I | GCNNGC | 7 cut(s) | 380, 1255, 1620, 1854, 1891, 2091, 2175 |
| BstDEI | CTNAG | 7 cut(s) | 290, 531, 805, 842, 1293, 1420, 2133 |
| BstDSI | CCRYGG | 1 cut(s) | 1562 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 719 |
| BstF5I | GGATG | 3 cut(s) | 583, 1846, 2093 |
| BstFNI | CGCG | 1 cut(s) | 419 |
| BstH2I | RGCGCY | 3 cut(s) | 345, 451, 1527 |
| BstHHI | GCGC | 4 cut(s) | 227, 344, 450, 1526 |
| BstMAI | GTCTC | 5 cut(s) | 401, 908, 950, 1407, 1686 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 361, 496, 1523, 1703 |
| BstNI | CCWGG | 1 cut(s) | 1155 |
| BstNSI | RCATGY | 1 cut(s) | 1622 |
| BstSCI | CCNGG | 2 cut(s) | 781, 1153 |
| BstSFI | CTRYAG | 5 cut(s) | 477, 618, 699, 922, 1329 |
| BstSNI | TACGTA | 1 cut(s) | 1557 |
| BstUI | CGCG | 1 cut(s) | 419 |
| BstV1I | GCAGC | 7 cut(s) | 463, 486, 691, 781, 2167, 2194, 2197 |
| BstV2I | GAAGAC | 3 cut(s) | 324, 1602, 1944 |
| BstX2I | RGATCY | 2 cut(s) | 684, 1144 |
| BstYI | RGATCY | 2 cut(s) | 684, 1144 |
| BstZ17I | GTATAC | 2 cut(s) | 974, 1463 |
| BsuRI | GGCC | 5 cut(s) | 361, 536, 781, 1697, 1990 |
| BtgI | CCRYGG | 1 cut(s) | 1562 |
| BtgZI | GCGATG | 1 cut(s) | 1949 |
| BtsCI | GGATG | 3 cut(s) | 583, 1846, 2093 |
| BtsIMutI | CAGTG | 2 cut(s) | 587, 864 |
| BveI | ACCTGC | 2 cut(s) | 520, 824 |
| Cac8I | GCNNGC | 7 cut(s) | 380, 1255, 1620, 1854, 1891, 2091, 2175 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1057 |
| CfoI | GCGC | 4 cut(s) | 227, 344, 450, 1526 |
| Cfr10I | RCCGGY | 1 cut(s) | 378 |
| Cfr13I | GGNCC | 4 cut(s) | 509, 780, 1696, 1988 |
| CseI | GACGC | 2 cut(s) | 263, 1501 |
| Csp6I | GTAC | 8 cut(s) | 494, 747, 788, 1170, 1444, 1554, 1558, 1580 |
| CviAII | CATG | 6 cut(s) | 1081, 1139, 1441, 1563, 1619, 1777 |
| CviQI | GTAC | 8 cut(s) | 494, 747, 788, 1170, 1444, 1554, 1558, 1580 |
| DdeI | CTNAG | 7 cut(s) | 290, 531, 805, 842, 1293, 1420, 2133 |
| DinI | GGCGCC | 2 cut(s) | 343, 1525 |
| DraI | TTTAAA | 1 cut(s) | 1222 |
| Eam1104I | CTCTTC | 4 cut(s) | 175, 287, 389, 663 |
| EarI | CTCTTC | 4 cut(s) | 175, 287, 389, 663 |
| EciI | GGCGGA | 1 cut(s) | 370 |
| Ecl136II | GAGCTC | 4 cut(s) | 289, 583, 1603, 2137 |
| Eco105I | TACGTA | 1 cut(s) | 1557 |
| Eco130I | CCWWGG | 3 cut(s) | 715, 1562, 1860 |
| Eco24I | GRGCYC | 4 cut(s) | 291, 585, 1605, 2139 |
| Eco31I | GGTCTC | 3 cut(s) | 401, 950, 1407 |
| Eco32I | GATATC | 1 cut(s) | 2032 |
| Eco47I | GGWCC | 1 cut(s) | 509 |
| Eco47III | AGCGCT | 1 cut(s) | 449 |
| Eco53kI | GAGCTC | 4 cut(s) | 289, 583, 1603, 2137 |
| Eco57I | CTGAAG | 1 cut(s) | 857 |
| EcoICRI | GAGCTC | 4 cut(s) | 289, 583, 1603, 2137 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 719 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1696, 1988 |
| EcoRII | CCWGG | 1 cut(s) | 1153 |
| EcoRV | GATATC | 1 cut(s) | 2032 |
| EcoT14I | CCWWGG | 3 cut(s) | 715, 1562, 1860 |
| EcoT38I | GRGCYC | 4 cut(s) | 291, 585, 1605, 2139 |
| EgeI | GGCGCC | 2 cut(s) | 343, 1525 |
| EheI | GGCGCC | 2 cut(s) | 343, 1525 |
| ErhI | CCWWGG | 3 cut(s) | 715, 1562, 1860 |
| FaeI | CATG | 6 cut(s) | 1084, 1142, 1444, 1566, 1622, 1780 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 723, 755 |
| FaqI | GGGAC | 1 cut(s) | 1108 |
| FatI | CATG | 6 cut(s) | 1080, 1138, 1440, 1562, 1618, 1776 |
| FauNDI | CATATG | 1 cut(s) | 1174 |
| FblI | GTMKAC | 4 cut(s) | 252, 838, 973, 1462 |
| FokI | GGATG | 3 cut(s) | 590, 1853, 2080 |
| FriOI | GRGCYC | 4 cut(s) | 291, 585, 1605, 2139 |
| FspBI | CTAG | 5 cut(s) | 653, 735, 830, 1572, 1676 |
| GlaI | GCGC | 4 cut(s) | 226, 343, 449, 1525 |
| HaeII | RGCGCY | 3 cut(s) | 345, 451, 1527 |
| HaeIII | GGCC | 5 cut(s) | 361, 536, 781, 1697, 1990 |
| HapII | CCGG | 3 cut(s) | 231, 379, 783 |
| HgaI | GACGC | 2 cut(s) | 263, 1501 |
| HhaI | GCGC | 4 cut(s) | 227, 344, 450, 1526 |
| Hin1I | GRCGYC | 4 cut(s) | 255, 342, 1512, 1524 |
| Hin1II | CATG | 6 cut(s) | 1084, 1142, 1444, 1566, 1622, 1780 |
| Hin6I | GCGC | 4 cut(s) | 225, 342, 448, 1524 |
| HinP1I | GCGC | 4 cut(s) | 225, 342, 448, 1524 |
| HincII | GTYRAC | 1 cut(s) | 253 |
| HindII | GTYRAC | 1 cut(s) | 253 |
| HindIII | AAGCTT | 1 cut(s) | 1251 |
| HinfI | GANTC | 6 cut(s) | 367, 1131, 1242, 1679, 1865, 2147 |
| HpaII | CCGG | 3 cut(s) | 231, 379, 783 |
| HphI | GGTGA | 4 cut(s) | 102, 391, 1226, 1587 |
| Hpy166II | GTNNAC | 7 cut(s) | 253, 659, 839, 974, 1270, 1463, 1902 |
| Hpy8I | GTNNAC | 7 cut(s) | 253, 659, 839, 974, 1270, 1463, 1902 |
| Hpy99I | CGWCG | 6 cut(s) | 204, 207, 248, 257, 747, 1517 |
| HpyCH4III | ACNGT | 4 cut(s) | 591, 1274, 1899, 1983 |
| HpyCH4IV | ACGT | 1 cut(s) | 1556 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 361, 496, 1523, 1703 |
| HpyF3I | CTNAG | 7 cut(s) | 290, 531, 805, 842, 1293, 1420, 2133 |
| HpySE526I | ACGT | 1 cut(s) | 1556 |
| Hsp92I | GRCGYC | 4 cut(s) | 255, 342, 1512, 1524 |
| Hsp92II | CATG | 6 cut(s) | 1084, 1142, 1444, 1566, 1622, 1780 |
| HspAI | GCGC | 4 cut(s) | 225, 342, 448, 1524 |
| KasI | GGCGCC | 2 cut(s) | 341, 1523 |
| KroI | GCCGGC | 1 cut(s) | 378 |
| KroNI | GCCGGC | 1 cut(s) | 380 |
| LguI | GCTCTTC | 2 cut(s) | 389, 663 |
| LmnI | GCTCC | 2 cut(s) | 445, 2142 |
| Lsp1109I | GCAGC | 7 cut(s) | 463, 486, 691, 781, 2167, 2194, 2197 |
| LweI | GCATC | 6 cut(s) | 212, 292, 905, 1831, 2078, 2102 |
| MaeI | CTAG | 5 cut(s) | 653, 735, 830, 1572, 1676 |
| MaeII | ACGT | 1 cut(s) | 1556 |
| MaeIII | GTNAC | 4 cut(s) | 1303, 1345, 1977, 2160 |
| MbiI | CCGCTC | 1 cut(s) | 210 |
| MflI | RGATCY | 2 cut(s) | 684, 1144 |
| MhlI | GDGCHC | 4 cut(s) | 291, 585, 1605, 2139 |
| Mly113I | GGCGCC | 2 cut(s) | 342, 1524 |
| MlyI | GAGTC | 1 cut(s) | 1688 |
| MroNI | GCCGGC | 1 cut(s) | 378 |
| MseI | TTAA | 8 cut(s) | 860, 1221, 1358, 1727, 1952, 2022, 2166, 2195 |
| MspA1I | CMGCKG | 1 cut(s) | 364 |
| MspCI | CTTAAG | 1 cut(s) | 1951 |
| MspI | CCGG | 3 cut(s) | 231, 379, 783 |
| MspR9I | CCNGG | 2 cut(s) | 783, 1155 |
| Mva1269I | GAATGC | 1 cut(s) | 1381 |
| MvaI | CCWGG | 1 cut(s) | 1155 |
| MvnI | CGCG | 1 cut(s) | 419 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 361, 496, 1523, 1703 |
| NaeI | GCCGGC | 1 cut(s) | 380 |
| NarI | GGCGCC | 2 cut(s) | 342, 1524 |
| NciI | CCSGG | 1 cut(s) | 783 |
| NcoI | CCATGG | 1 cut(s) | 1562 |
| NdeI | CATATG | 1 cut(s) | 1174 |
| NgoMIV | GCCGGC | 1 cut(s) | 378 |
| NlaIII | CATG | 6 cut(s) | 1084, 1142, 1444, 1566, 1622, 1780 |
| NlaIV | GGNNCC | 4 cut(s) | 343, 990, 1435, 1525 |
| NspI | RCATGY | 1 cut(s) | 1622 |
| NspV | TTCGAA | 1 cut(s) | 1489 |
| PaeI | GCATGC | 1 cut(s) | 1622 |
| PciSI | GCTCTTC | 2 cut(s) | 389, 663 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 243, 249 |
| PctI | GAATGC | 1 cut(s) | 1381 |
| PdiI | GCCGGC | 1 cut(s) | 380 |
| PfeI | GAWTC | 5 cut(s) | 367, 1131, 1242, 1865, 2147 |
| PflFI | GACNNNGTC | 1 cut(s) | 242 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1154 |
| PleI | GAGTC | 1 cut(s) | 1687 |
| PluTI | GGCGCC | 2 cut(s) | 345, 1527 |
| PpsI | GAGTC | 1 cut(s) | 1687 |
| Ppu21I | YACGTR | 1 cut(s) | 1557 |
| PshBI | ATTAAT | 1 cut(s) | 2195 |
| Psp124BI | GAGCTC | 4 cut(s) | 291, 585, 1605, 2139 |
| Psp6I | CCWGG | 1 cut(s) | 1153 |
| PspGI | CCWGG | 1 cut(s) | 1153 |
| PspN4I | GGNNCC | 4 cut(s) | 343, 990, 1435, 1525 |
| PspPI | GGNCC | 4 cut(s) | 509, 780, 1696, 1988 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 642, 674 |
| PstI | CTGCAG | 2 cut(s) | 481, 1333 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1057 |
| PsuI | RGATCY | 2 cut(s) | 684, 1144 |
| PsyI | GACNNNGTC | 1 cut(s) | 242 |
| RsaI | GTAC | 8 cut(s) | 495, 748, 789, 1171, 1445, 1555, 1559, 1581 |
| RsaNI | GTAC | 8 cut(s) | 494, 747, 788, 1170, 1444, 1554, 1558, 1580 |
| SacI | GAGCTC | 4 cut(s) | 291, 585, 1605, 2139 |
| SalI | GTCGAC | 1 cut(s) | 251 |
| SapI | GCTCTTC | 2 cut(s) | 389, 663 |
| SaqAI | TTAA | 8 cut(s) | 860, 1221, 1358, 1727, 1952, 2022, 2166, 2195 |
| Sau96I | GGNCC | 4 cut(s) | 509, 780, 1696, 1988 |
| ScaI | AGTACT | 2 cut(s) | 495, 1581 |
| SchI | GAGTC | 1 cut(s) | 1688 |
| ScrFI | CCNGG | 2 cut(s) | 783, 1155 |
| SduI | GDGCHC | 4 cut(s) | 291, 585, 1605, 2139 |
| SfaNI | GCATC | 6 cut(s) | 212, 292, 905, 1831, 2078, 2102 |
| SfcI | CTRYAG | 5 cut(s) | 477, 618, 699, 922, 1329 |
| SfoI | GGCGCC | 2 cut(s) | 343, 1525 |
| SfuI | TTCGAA | 1 cut(s) | 1489 |
| SinI | GGWCC | 1 cut(s) | 509 |
| SmlI | CTYRAG | 3 cut(s) | 1604, 1951, 1992 |
| SmoI | CTYRAG | 3 cut(s) | 1604, 1951, 1992 |
| SnaBI | TACGTA | 1 cut(s) | 1557 |
| SphI | GCATGC | 1 cut(s) | 1622 |
| SsiI | CCGC | 6 cut(s) | 208, 228, 355, 362, 707, 1234 |
| SspDI | GGCGCC | 2 cut(s) | 341, 1523 |
| SspI | AATATT | 1 cut(s) | 1402 |
| SspMI | CTAG | 5 cut(s) | 653, 735, 830, 1572, 1676 |
| SstI | GAGCTC | 4 cut(s) | 291, 585, 1605, 2139 |
| StyD4I | CCNGG | 2 cut(s) | 781, 1153 |
| StyI | CCWWGG | 3 cut(s) | 715, 1562, 1860 |
| TaaI | ACNGT | 4 cut(s) | 591, 1274, 1899, 1983 |
| TaiI | ACGT | 1 cut(s) | 1559 |
| TaqI | TCGA | 8 cut(s) | 246, 252, 285, 465, 547, 601, 693, 1489 |
| TatI | WGTACW | 4 cut(s) | 493, 787, 1443, 1579 |
| TauI | GCSGC | 4 cut(s) | 210, 230, 364, 710 |
| TfiI | GAWTC | 5 cut(s) | 367, 1131, 1242, 1865, 2147 |
| Tru1I | TTAA | 8 cut(s) | 860, 1221, 1358, 1727, 1952, 2022, 2166, 2195 |
| Tru9I | TTAA | 8 cut(s) | 860, 1221, 1358, 1727, 1952, 2022, 2166, 2195 |
| TscAI | CASTG | 2 cut(s) | 594, 871 |
| TseI | GCWGC | 7 cut(s) | 476, 499, 704, 794, 2155, 2207, 2210 |
| TspDTI | ATGAA | 6 cut(s) | 903, 1234, 1765, 1905, 1950, 2069 |
| TspGWI | ACGGA | 2 cut(s) | 1448, 1691 |
| TspRI | CASTG | 2 cut(s) | 594, 871 |
| Tth111I | GACNNNGTC | 1 cut(s) | 242 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1154 |
| Vha464I | CTTAAG | 1 cut(s) | 1951 |
| VpaK11BI | GGWCC | 1 cut(s) | 509 |
| VspI | ATTAAT | 1 cut(s) | 2195 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 719 |
| XapI | RAATTY | 6 cut(s) | 9, 32, 950, 1217, 1454, 1823 |
| XbaI | TCTAGA | 1 cut(s) | 1675 |
| XceI | RCATGY | 1 cut(s) | 1622 |
| XmiI | GTMKAC | 4 cut(s) | 252, 838, 973, 1462 |
| XspI | CTAG | 5 cut(s) | 653, 735, 830, 1572, 1676 |
| ZrmI | AGTACT | 2 cut(s) | 495, 1581 |