Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0009372

Physical Location & Seq

Genomic Coordinates Forward (+)

32855436 .. 32868344

Gene Structure 12909 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG184200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGCTTCTTCGCCTTCCTTCACCTTCTCTCTCTTCTCTCCTTTCCACTCCCACTCCCACTCCCAAACCCCCTCGATTCTCTCCGGCTCGGCCCCGCCGCTCGCTTTTCCGATGCGCCGCCCTCAAAAACGACGTCGACGTCGACATCGACGCCTTCACTGCCAAGTCCGGCTACCTCTTCGACCTCAGCGCGTCGGAGGCCAACTCCTTGGCCGACTATGATATCTCCAAAATCGGCGCCATTTACCGCCGGAAGCCTCTCGTTGTTTTCCGTCGGCTCCTACAGATCGCCTTCACTTTCGGCTACTGGTTTGCGCTTCGCTTCATTGATGCTCAAATGGAACGCTCCGACCAAATGTTCGAGGTTAGAGCTGCTGAGCTTCGGCAAATACTAGTAGAACTTGGACCGGCGTATGTCAAAATCGCTCAGGCTATTTCGTCTCGACCTGACTTGATACCACCATCTTACGTGGATGAACTCTCACTGTTGCAAGATCGAATATCTCCATTTTCTAATGAAGATGCTATAAAGACAATAGAAAATGAACTTGCTTTACCAATAGACGAGCTTTTCTCTGAGATCTCACCAGAACCTGTAGCTGCAGCTTCTCTTGGACAGGTGTATCAAGCTAGGCTTCGCCGTAGGGGACAGCTTGTTGCAGTTAAAGTACAAAGGCCTGGAGTACAAGCTGCTATTTCCTTAGACATATTGATCTTGCGTTCTCTAGCAGGTCTTCTCAGGAGAATAAGAAAATTAAACACTGATCTTCAGGCAGTTGTTGATGAATGGGCATCAAGTCTCTTTCGGGAGATGGACTACTGGAAGGAAGCAAATAATGGTATCAAGTTCAGGCAGTTATATGGTGGTATACCTGATGTTTTGGTTCCAAAAATGTATCTGGAGCACACAACTCGTAGGGTGCTTGTGATGGAGTGGGTGGAGGGACAGAAGCTGTCAGAAGTGAATGATCTTTACTTGGTGGAGGTTGGGACTTACTGCTCTTTCAATCAGCTTCTGGAATGTGGTTTCTATCATGCAGATCCACACCCTGGAAACCTTCTTCGCACATATGATGGAAAACTTGCTTATTTAGATTTTGGTATGATGGGTGAATTTAAAGAAGAACTTCGCAATGGATTTATTGAAGCTTCACTCCATCTTGTAAACAGCAATTTTGGTGCATTGGCCAAGGACTTTGTTACTCTTGGGCTTATTCCACCAACTGCAGACAAGGAAGCTGTTACAAAGGCTTTAACAGGTGTCTTTCAGAATGCTGTTGCCAAAGGAGTGAGCAATATTAGCTTCGGAGACCTCTTAGGAGATCTAGGAACTACCATGTACAAATTCAAATTTCGCATACCTTCTTATTTTTCTCTCGTCATTCGAAGTCTTGCTGTTCTGGAAGGTGTTGCTATTGGCTCCAACCCAGATTACAAGGTTTTAGGTAGCACATACCCATGGATTGCTAGGAAAATACTGACCGACAACTCACCTCAACTCAAGTCTTCCCTGCAGGCCCTTCTTTATGAGGAAGGTGTATTCAGAATTGATCGTCTAGAATCTCTATTTGCAGAGTCCCTCCGAGCCAAAACAGAGAGAGATATGCTTGGAAAACAAGATGACGATGCTAATTCTAGGGTACTTATCAAGCAAATCCTTTCTTTTATGTTAACTGAGAAGGGTGCATTTGTGAAGGATATACTTCTTCAAGAATTTGTTAAGGGATTGGATGCACTTGGGCTGGCAACCTTGGATTCTCTCACTACTGTGGCTACTACAAATGTTCCACTCATTGCTCCCTTTTCATTCTCTACAATGACGAATGAAGACAAGATCAACTTAAGAACCCTACGTCGCCTTCTGCTATTGCTGTCAGGTTCTCAGAGAAATGAAAACTCAAAAGCAGTGATTAGACAGGATGGTCCATACGAGAATCAGCAAATGAACTTGGCGGAACCATCATTAGTTTTCAATCAACTTGGATCCATTCAAGAAGTTCTACCTATCCTCTCTGTCATTCCGGAGCTCCCACCAGAATCACAACAGCAGTTACTTAATTTGCCAGTTGATCTCACTGGACGTCTAATTTCCCGTGCCGTTGCAAGGACAATCAGAAGGGTAATTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

709

Amino Acids

79.32

Weight (kDa)

6.96

Isoelectric Point (pI)

43.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	163 - 396	9.4e-67	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71810
fragaria_vesca	FvH4_2g12660 FvH4_2g12660 FvH4_2g12660 FvH4_2g12660
malus_domestica	MD10G1042100.v1.1
prunus_persica	Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1 Prupe.8G046100_v2.0.a1
pyrus_communis	pycom10g02920
rosa_chinensis	RchiOBHm_Chr6g0273371
rosa_laevigata	RLG00000013622
rosa_multiflora	Rmu_sc0000239.1_g000003
rosa_roxburghii	Rroxscaffold_7G00195430
rosa_rugosa	Rorug06G0074300 Rorug06G0074400
rosa_samantha	Rh6AG189500 Rh6BG192900 Rh6CG192700 Rh6DG184200
rosa_wichuraiana	Rw6G016490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	137, 1920
AatII	GACGTC	3 cut(s)	135, 141, 2083
Acc36I	ACCTGC	1 cut(s)	719
AccB1I	GGYRCC	1 cut(s)	236
AccB7I	CCANNNNNTGG	1 cut(s)	1049
AccBSI	CCGCTC	1 cut(s)	99
AccI	GTMKAC	3 cut(s)	135, 141, 868
AccII	CGCG	1 cut(s)	191
AccIII	TCCGGA	1 cut(s)	2020
AciI	CCGC	5 cut(s)	94, 97, 117, 247, 1952
AclWI	GGATC	3 cut(s)	1034, 1977, 1990
AcoI	YGGCCR	2 cut(s)	210, 1185
AcsI	RAATTY	4 cut(s)	1112, 1343, 1349, 1712
AcuI	CTGAAG	1 cut(s)	752
AcyI	GRCGYC	5 cut(s)	132, 138, 150, 237, 2080
AfaI	GTAC	4 cut(s)	669, 684, 1340, 1641
AfiI	CCNNNNNNNGG	2 cut(s)	1049, 2103
AflII	CTTAAG	1 cut(s)	1840
AgsI	TTSAA	6 cut(s)	1006, 1145, 1348, 1709, 1972, 1991
AhlI	ACTAGT	1 cut(s)	391
AjnI	CCWGG	2 cut(s)	676, 1048
AleI	CACNNNNGTG	1 cut(s)	1766
Alw21I	GWGCWC	2 cut(s)	906, 2028
Alw26I	GTCTC	3 cut(s)	444, 803, 1302
AlwI	GGATC	3 cut(s)	1034, 1977, 1990
AlwNI	CAGNNNCTG	3 cut(s)	593, 952, 1015
Aor13HI	TCCGGA	1 cut(s)	2020
AoxI	GGCC	6 cut(s)	89, 198, 210, 674, 1185, 1515
ApeKI	GCWGC	4 cut(s)	371, 599, 602, 689
ApoI	RAATTY	4 cut(s)	1112, 1343, 1349, 1712
ArsI	GACNNNNNNTTYG	4 cut(s)	117, 149, 341, 373
Asp700I	GAANNNNTTC	1 cut(s)	1125
AspLEI	GCGC	4 cut(s)	116, 191, 239, 316
AspS9I	GGNCC	4 cut(s)	90, 404, 1516, 1922
AsuHPI	GGTGA	4 cut(s)	12, 576, 1121, 1482
AsuII	TTCGAA	1 cut(s)	1384
AvaII	GGWCC	2 cut(s)	404, 1922
BaeI	ACNNNNGTAYC	2 cut(s)	605, 638
BalI	TGGCCA	1 cut(s)	1187
BamHI	GGATCC	1 cut(s)	1982
BanI	GGYRCC	1 cut(s)	236
BanII	GRGCYC	1 cut(s)	2028
BbsI	GAAGAC	3 cut(s)	725, 1497, 1833
Bbv12I	GWGCWC	2 cut(s)	906, 2028
BbvCI	CCTCAGC	1 cut(s)	185
BbvI	GCAGC	4 cut(s)	358, 586, 614, 676
BccI	CCATC	8 cut(s)	469, 805, 922, 1067, 1099, 1164, 1913, 1966
BceAI	ACGGC	2 cut(s)	624, 2081
BcgI	CGANNNNNNTGC	2 cut(s)	893, 927
BciT130I	CCWGG	2 cut(s)	678, 1050
BcoDI	GTCTC	3 cut(s)	444, 803, 1302
BcuI	ACTAGT	1 cut(s)	391
BfaI	CTAG	7 cut(s)	392, 630, 725, 1325, 1467, 1556, 1635
BfmI	CTRYAG	5 cut(s)	281, 594, 600, 1224, 1511
BfoI	RGCGCY	1 cut(s)	240
BfrI	CTTAAG	1 cut(s)	1840
BfuAI	ACCTGC	1 cut(s)	719
BglII	AGATCT	2 cut(s)	579, 1321
BisI	GCNGC	6 cut(s)	97, 117, 372, 600, 603, 690
BlpI	GCTNAGC	1 cut(s)	375
BlsI	GCNGC	6 cut(s)	98, 118, 373, 601, 604, 691
Bme1390I	CCNGG	2 cut(s)	678, 1050
Bme18I	GGWCC	2 cut(s)	404, 1922
BmgT120I	GGNCC	4 cut(s)	90, 404, 1516, 1922
BmiI	GGNNCC	7 cut(s)	92, 238, 278, 885, 1420, 1956, 1984
BmrFI	CCNGG	2 cut(s)	678, 1050
BmsI	GCATC	6 cut(s)	101, 319, 511, 800, 1615, 1720
BpiI	GAAGAC	3 cut(s)	725, 1497, 1833
BplI	GAGNNNNNCTC	4 cut(s)	188, 220, 557, 589
BpmI	CTGGAG	2 cut(s)	699, 920
Bpu10I	CCTNAGC	2 cut(s)	185, 426
Bpu1102I	GCTNAGC	1 cut(s)	375
Bpu14I	TTCGAA	1 cut(s)	1384
BpuEI	CTTGAG	1 cut(s)	1484
BsaAI	YACGTR	1 cut(s)	469
BsaHI	GRCGYC	5 cut(s)	132, 138, 150, 237, 2080
BsaI	GGTCTC	1 cut(s)	1302
BsaJI	CCNNGG	5 cut(s)	207, 1048, 1188, 1457, 1749
BsaWI	WCCGGW	1 cut(s)	2020
BsaXI	ACNNNNNCTCC	4 cut(s)	37, 43, 67, 73
Bsc4I	CCNNNNNNNGG	2 cut(s)	1049, 2103
Bse118I	RCCGGY	1 cut(s)	406
Bse1I	ACTGG	4 cut(s)	311, 824, 2063, 2080
Bse3DI	GCAATG	2 cut(s)	1138, 1791
BseAI	TCCGGA	1 cut(s)	2020
BseBI	CCWGG	2 cut(s)	678, 1050
BseDI	CCNNGG	5 cut(s)	207, 1048, 1188, 1457, 1749
BseGI	GGATG	3 cut(s)	478, 1735, 1924
BseLI	CCNNNNNNNGG	2 cut(s)	1049, 2103
BseMI	GCAATG	2 cut(s)	1138, 1791
BseMII	CTCAG	7 cut(s)	199, 366, 440, 567, 751, 1665, 1895
BseNI	ACTGG	4 cut(s)	311, 824, 2063, 2080
BseXI	GCAGC	4 cut(s)	358, 586, 614, 676
Bsh1236I	CGCG	1 cut(s)	191
BshFI	GGCC	6 cut(s)	91, 200, 212, 676, 1187, 1517
BshNI	GGYRCC	1 cut(s)	236
BsiHKAI	GWGCWC	2 cut(s)	906, 2028
BsiSI	CCGG	5 cut(s)	83, 168, 250, 407, 2021
BslFI	GGGAC	4 cut(s)	660, 957, 1003, 1561
BslI	CCNNNNNNNGG	2 cut(s)	1049, 2103
BsmAI	GTCTC	3 cut(s)	444, 803, 1302
BsmBI	CGTCTC	1 cut(s)	444
BsmFI	GGGAC	4 cut(s)	660, 957, 1003, 1561
BsmI	GAATGC	1 cut(s)	1276
BsnI	GGCC	6 cut(s)	91, 200, 212, 676, 1187, 1517
Bso31I	GGTCTC	1 cut(s)	1302
Bsp119I	TTCGAA	1 cut(s)	1384
Bsp1286I	GDGCHC	2 cut(s)	906, 2028
Bsp13I	TCCGGA	1 cut(s)	2020
Bsp1407I	TGTACA	1 cut(s)	1338
Bsp1720I	GCTNAGC	1 cut(s)	375
Bsp19I	CCATGG	1 cut(s)	1457
BspACI	CCGC	5 cut(s)	94, 97, 117, 247, 1952
BspANI	GGCC	6 cut(s)	91, 200, 212, 676, 1187, 1517
BspCNI	CTCAG	7 cut(s)	198, 367, 439, 568, 750, 1666, 1894
BspEI	TCCGGA	1 cut(s)	2020
BspFNI	CGCG	1 cut(s)	191
BspHI	TCATGA	1 cut(s)	2126
BspLI	GGNNCC	7 cut(s)	92, 238, 278, 885, 1420, 1956, 1984
BspMAI	CTGCAG	3 cut(s)	604, 1228, 1515
BspMI	ACCTGC	1 cut(s)	719
BspPI	GGATC	3 cut(s)	1034, 1977, 1990
BspT104I	TTCGAA	1 cut(s)	1384
BspT107I	GGYRCC	1 cut(s)	236
BspTI	CTTAAG	1 cut(s)	1840
BspTNI	GGTCTC	1 cut(s)	1302
BsrBI	CCGCTC	1 cut(s)	99
BsrDI	GCAATG	2 cut(s)	1138, 1791
BsrFI	RCCGGY	1 cut(s)	406
BsrGI	TGTACA	1 cut(s)	1338
BsrI	ACTGG	4 cut(s)	311, 824, 2063, 2080
BssAI	RCCGGY	1 cut(s)	406
BssECI	CCNNGG	5 cut(s)	207, 1048, 1188, 1457, 1749
BssNAI	GTATAC	1 cut(s)	869
BssNI	GRCGYC	5 cut(s)	132, 138, 150, 237, 2080
BssT1I	CCWWGG	4 cut(s)	207, 1188, 1457, 1749
Bst1107I	GTATAC	1 cut(s)	869
Bst2UI	CCWGG	2 cut(s)	678, 1050
Bst4CI	ACNGT	2 cut(s)	486, 1768
Bst6I	CTCTTC	2 cut(s)	37, 182
BstACI	GRCGYC	5 cut(s)	132, 138, 150, 237, 2080
BstAFI	CTTAAG	1 cut(s)	1840
BstAUI	TGTACA	1 cut(s)	1338
BstBAI	YACGTR	1 cut(s)	469
BstBI	TTCGAA	1 cut(s)	1384
BstC8I	GCNNGC	3 cut(s)	101, 1515, 1743
BstDEI	CTNAG	9 cut(s)	185, 375, 426, 576, 700, 737, 1315, 1674, 1881
BstDSI	CCRYGG	1 cut(s)	1457
BstF5I	GGATG	3 cut(s)	478, 1735, 1924
BstFNI	CGCG	1 cut(s)	191
BstH2I	RGCGCY	1 cut(s)	240
BstHHI	GCGC	4 cut(s)	116, 191, 239, 316
BstMAI	GTCTC	3 cut(s)	444, 803, 1302
BstMWI	GCNNNNNNNGC	3 cut(s)	158, 197, 1299
BstNI	CCWGG	2 cut(s)	678, 1050
BstSCI	CCNGG	2 cut(s)	676, 1048
BstSFI	CTRYAG	5 cut(s)	281, 594, 600, 1224, 1511
BstUI	CGCG	1 cut(s)	191
BstV1I	GCAGC	4 cut(s)	358, 586, 614, 676
BstV2I	GAAGAC	3 cut(s)	725, 1497, 1833
BstX2I	RGATCY	4 cut(s)	579, 1039, 1321, 1982
BstXI	CCANNNNNNTGG	1 cut(s)	208
BstYI	RGATCY	4 cut(s)	579, 1039, 1321, 1982
BstZ17I	GTATAC	1 cut(s)	869
BsuRI	GGCC	6 cut(s)	91, 200, 212, 676, 1187, 1517
BtgI	CCRYGG	1 cut(s)	1457
BtsCI	GGATG	3 cut(s)	478, 1735, 1924
BtsI	GCAGTG	2 cut(s)	156, 1911
BtsIMutI	CAGTG	5 cut(s)	156, 482, 759, 1911, 2073
BveI	ACCTGC	1 cut(s)	719
Cac8I	GCNNGC	3 cut(s)	101, 1515, 1743
CaiI	CAGNNNCTG	3 cut(s)	593, 952, 1015
CciI	TCATGA	1 cut(s)	2126
CfoI	GCGC	4 cut(s)	116, 191, 239, 316
Cfr10I	RCCGGY	1 cut(s)	406
Cfr13I	GGNCC	4 cut(s)	90, 404, 1516, 1922
CseI	GACGC	2 cut(s)	158, 180
Csp6I	GTAC	4 cut(s)	668, 683, 1339, 1640
CviAII	CATG	4 cut(s)	1034, 1336, 1458, 2127
CviQI	GTAC	4 cut(s)	668, 683, 1339, 1640
DdeI	CTNAG	9 cut(s)	185, 375, 426, 576, 700, 737, 1315, 1674, 1881
DinI	GGCGCC	1 cut(s)	238
DraI	TTTAAA	1 cut(s)	1117
DrdI	GACNNNNNNGTC	2 cut(s)	137, 1920
DseDI	GACNNNNNNGTC	2 cut(s)	137, 1920
EaeI	YGGCCR	2 cut(s)	210, 1185
Eam1104I	CTCTTC	2 cut(s)	37, 182
EarI	CTCTTC	2 cut(s)	37, 182
EciI	GGCGGA	1 cut(s)	1967
Ecl136II	GAGCTC	1 cut(s)	2026
Eco130I	CCWWGG	4 cut(s)	207, 1188, 1457, 1749
Eco147I	AGGCCT	1 cut(s)	676
Eco24I	GRGCYC	1 cut(s)	2028
Eco31I	GGTCTC	1 cut(s)	1302
Eco32I	GATATC	1 cut(s)	223
Eco47I	GGWCC	2 cut(s)	404, 1922
Eco53kI	GAGCTC	1 cut(s)	2026
Eco57I	CTGAAG	1 cut(s)	752
EcoICRI	GAGCTC	1 cut(s)	2026
EcoO109I	RGGNCCY	1 cut(s)	1516
EcoRII	CCWGG	2 cut(s)	676, 1048
EcoRV	GATATC	1 cut(s)	223
EcoT14I	CCWWGG	4 cut(s)	207, 1188, 1457, 1749
EcoT38I	GRGCYC	1 cut(s)	2028
EgeI	GGCGCC	1 cut(s)	238
EheI	GGCGCC	1 cut(s)	238
ErhI	CCWWGG	4 cut(s)	207, 1188, 1457, 1749
Esp3I	CGTCTC	1 cut(s)	444
FaeI	CATG	4 cut(s)	1037, 1339, 1461, 2130
FalI	AAGNNNNNCTT	6 cut(s)	618, 650, 1110, 1142, 1823, 1855
FaqI	GGGAC	4 cut(s)	660, 957, 1003, 1561
FatI	CATG	4 cut(s)	1033, 1335, 1457, 2126
FauI	CCCGC	1 cut(s)	101
FauNDI	CATATG	1 cut(s)	1069
FblI	GTMKAC	3 cut(s)	135, 141, 868
Fnu4HI	GCNGC	6 cut(s)	97, 117, 372, 600, 603, 690
FokI	GGATG	3 cut(s)	485, 1742, 1931
FriOI	GRGCYC	1 cut(s)	2028
Fsp4HI	GCNGC	6 cut(s)	97, 117, 372, 600, 603, 690
FspBI	CTAG	7 cut(s)	392, 630, 725, 1325, 1467, 1556, 1635
GlaI	GCGC	4 cut(s)	115, 190, 238, 315
GluI	GCNGC	6 cut(s)	97, 117, 372, 600, 603, 690
GsuI	CTGGAG	2 cut(s)	699, 920
HaeII	RGCGCY	1 cut(s)	240
HaeIII	GGCC	6 cut(s)	91, 200, 212, 676, 1187, 1517
HapII	CCGG	5 cut(s)	83, 168, 250, 407, 2021
HgaI	GACGC	2 cut(s)	158, 180
HhaI	GCGC	4 cut(s)	116, 191, 239, 316
Hin1I	GRCGYC	5 cut(s)	132, 138, 150, 237, 2080
Hin1II	CATG	4 cut(s)	1037, 1339, 1461, 2130
Hin6I	GCGC	4 cut(s)	114, 189, 237, 314
HinP1I	GCGC	4 cut(s)	114, 189, 237, 314
HincII	GTYRAC	3 cut(s)	136, 142, 1671
HindII	GTYRAC	3 cut(s)	136, 142, 1671
HindIII	AAGCTT	1 cut(s)	1146
HinfI	GANTC	6 cut(s)	75, 1559, 1574, 1754, 1933, 2036
HpaI	GTTAAC	1 cut(s)	1671
HpaII	CCGG	5 cut(s)	83, 168, 250, 407, 2021
HphI	GGTGA	4 cut(s)	12, 576, 1121, 1482
Hpy166II	GTNNAC	5 cut(s)	136, 142, 869, 1165, 1671
Hpy8I	GTNNAC	5 cut(s)	136, 142, 869, 1165, 1671
Hpy99I	CGWCG	8 cut(s)	134, 137, 140, 143, 152, 196, 276, 1857
HpyCH4III	ACNGT	2 cut(s)	486, 1768
HpyCH4IV	ACGT	5 cut(s)	132, 138, 468, 1852, 2080
HpyF10VI	GCNNNNNNNGC	3 cut(s)	158, 197, 1299
HpyF3I	CTNAG	9 cut(s)	185, 375, 426, 576, 700, 737, 1315, 1674, 1881
HpySE526I	ACGT	5 cut(s)	132, 138, 468, 1852, 2080
Hsp92I	GRCGYC	5 cut(s)	132, 138, 150, 237, 2080
Hsp92II	CATG	4 cut(s)	1037, 1339, 1461, 2130
HspAI	GCGC	4 cut(s)	114, 189, 237, 314
KasI	GGCGCC	1 cut(s)	236
Kpn2I	TCCGGA	1 cut(s)	2020
KspAI	GTTAAC	1 cut(s)	1671
LmnI	GCTCC	7 cut(s)	282, 350, 901, 1424, 1801, 2023, 2031
Lsp1109I	GCAGC	4 cut(s)	358, 586, 614, 676
LweI	GCATC	6 cut(s)	101, 319, 511, 800, 1615, 1720
MaeI	CTAG	7 cut(s)	392, 630, 725, 1325, 1467, 1556, 1635
MaeII	ACGT	5 cut(s)	132, 138, 468, 1852, 2080
MaeIII	GTNAC	3 cut(s)	1198, 1240, 2049
MbiI	CCGCTC	1 cut(s)	99
MflI	RGATCY	4 cut(s)	579, 1039, 1321, 1982
MhlI	GDGCHC	2 cut(s)	906, 2028
MlsI	TGGCCA	1 cut(s)	1187
MluNI	TGGCCA	1 cut(s)	1187
Mly113I	GGCGCC	1 cut(s)	237
MlyI	GAGTC	1 cut(s)	1583
MmeI	TCCRAC	3 cut(s)	174, 372, 1446
Mox20I	TGGCCA	1 cut(s)	1187
MroI	TCCGGA	1 cut(s)	2020
MroXI	GAANNNNTTC	1 cut(s)	1125
MscI	TGGCCA	1 cut(s)	1187
MseI	TTAA	8 cut(s)	663, 755, 1116, 1253, 1670, 1719, 1841, 2055
MslI	CAYNNNNRTG	2 cut(s)	1456, 1766
Msp20I	TGGCCA	1 cut(s)	1187
MspCI	CTTAAG	1 cut(s)	1840
MspI	CCGG	5 cut(s)	83, 168, 250, 407, 2021
MspR9I	CCNGG	2 cut(s)	678, 1050
Mva1269I	GAATGC	1 cut(s)	1276
MvaI	CCWGG	2 cut(s)	678, 1050
MvnI	CGCG	1 cut(s)	191
MwoI	GCNNNNNNNGC	3 cut(s)	158, 197, 1299
NarI	GGCGCC	1 cut(s)	237
NcoI	CCATGG	1 cut(s)	1457
NdeI	CATATG	1 cut(s)	1069
NlaIII	CATG	4 cut(s)	1037, 1339, 1461, 2130
NlaIV	GGNNCC	7 cut(s)	92, 238, 278, 885, 1420, 1956, 1984
NmeAIII	GCCGAG	1 cut(s)	67
NspV	TTCGAA	1 cut(s)	1384
OliI	CACNNNNGTG	1 cut(s)	1766
PagI	TCATGA	1 cut(s)	2126
PceI	AGGCCT	1 cut(s)	676
PcsI	WCGNNNNNNNCGW	3 cut(s)	135, 138, 144
PctI	GAATGC	1 cut(s)	1276
PdmI	GAANNNNTTC	1 cut(s)	1125
PfeI	GAWTC	5 cut(s)	75, 1559, 1754, 1933, 2036
PflMI	CCANNNNNTGG	1 cut(s)	1049
PkrI	GCNGC	6 cut(s)	98, 118, 373, 601, 604, 691
PleI	GAGTC	1 cut(s)	1582
PluTI	GGCGCC	1 cut(s)	240
PpsI	GAGTC	1 cut(s)	1582
Ppu21I	YACGTR	1 cut(s)	469
Psp124BI	GAGCTC	1 cut(s)	2028
Psp6I	CCWGG	2 cut(s)	676, 1048
PspGI	CCWGG	2 cut(s)	676, 1048
PspN4I	GGNNCC	7 cut(s)	92, 238, 278, 885, 1420, 1956, 1984
PspPI	GGNCC	4 cut(s)	90, 404, 1516, 1922
PsrI	GAACNNNNNNTAC	2 cut(s)	537, 569
PstI	CTGCAG	3 cut(s)	604, 1228, 1515
PstNI	CAGNNNCTG	3 cut(s)	593, 952, 1015
PsuI	RGATCY	4 cut(s)	579, 1039, 1321, 1982
RsaI	GTAC	4 cut(s)	669, 684, 1340, 1641
RsaNI	GTAC	4 cut(s)	668, 683, 1339, 1640
RseI	CAYNNNNRTG	2 cut(s)	1456, 1766
SacI	GAGCTC	1 cut(s)	2028
SalI	GTCGAC	2 cut(s)	134, 140
SaqAI	TTAA	8 cut(s)	663, 755, 1116, 1253, 1670, 1719, 1841, 2055
SatI	GCNGC	6 cut(s)	97, 117, 372, 600, 603, 690
Sau96I	GGNCC	4 cut(s)	90, 404, 1516, 1922
SbfI	CCTGCAGG	1 cut(s)	1515
SchI	GAGTC	1 cut(s)	1583
ScrFI	CCNGG	2 cut(s)	678, 1050
SdaI	CCTGCAGG	1 cut(s)	1515
SduI	GDGCHC	2 cut(s)	906, 2028
SfaNI	GCATC	6 cut(s)	101, 319, 511, 800, 1615, 1720
SfcI	CTRYAG	5 cut(s)	281, 594, 600, 1224, 1511
SfoI	GGCGCC	1 cut(s)	238
SfuI	TTCGAA	1 cut(s)	1384
SgrDI	CGTCGACG	1 cut(s)	134
SinI	GGWCC	2 cut(s)	404, 1922
SmiMI	CAYNNNNRTG	2 cut(s)	1456, 1766
SmlI	CTYRAG	2 cut(s)	1499, 1840
SmoI	CTYRAG	2 cut(s)	1499, 1840
SpeI	ACTAGT	1 cut(s)	391
Sse8387I	CCTGCAGG	1 cut(s)	1515
SseBI	AGGCCT	1 cut(s)	676
SsiI	CCGC	5 cut(s)	94, 97, 117, 247, 1952
SspDI	GGCGCC	1 cut(s)	236
SspI	AATATT	1 cut(s)	1297
SspMI	CTAG	7 cut(s)	392, 630, 725, 1325, 1467, 1556, 1635
SstI	GAGCTC	1 cut(s)	2028
StuI	AGGCCT	1 cut(s)	676
StyD4I	CCNGG	2 cut(s)	676, 1048
StyI	CCWWGG	4 cut(s)	207, 1188, 1457, 1749
TaaI	ACNGT	2 cut(s)	486, 1768
TaiI	ACGT	5 cut(s)	135, 141, 471, 1855, 2083
TaqI	TCGA	9 cut(s)	73, 135, 141, 147, 180, 360, 442, 496, 1384
TaqII	GACCGA	1 cut(s)	1496
TatI	WGTACW	3 cut(s)	667, 682, 1338
TauI	GCSGC	2 cut(s)	99, 119
TfiI	GAWTC	5 cut(s)	75, 1559, 1754, 1933, 2036
Tru1I	TTAA	8 cut(s)	663, 755, 1116, 1253, 1670, 1719, 1841, 2055
Tru9I	TTAA	8 cut(s)	663, 755, 1116, 1253, 1670, 1719, 1841, 2055
TscAI	CASTG	5 cut(s)	163, 489, 766, 1911, 2080
TseI	GCWGC	4 cut(s)	371, 599, 602, 689
TspGWI	ACGGA	1 cut(s)	260
TspRI	CASTG	5 cut(s)	163, 489, 766, 1911, 2080
Van91I	CCANNNNNTGG	1 cut(s)	1049
Vha464I	CTTAAG	1 cut(s)	1840
VpaK11BI	GGWCC	2 cut(s)	404, 1922
XapI	RAATTY	4 cut(s)	1112, 1343, 1349, 1712
XbaI	TCTAGA	1 cut(s)	1555
XmiI	GTMKAC	3 cut(s)	135, 141, 868
XmnI	GAANNNNTTC	1 cut(s)	1125
XspI	CTAG	7 cut(s)	392, 630, 725, 1325, 1467, 1556, 1635
ZraI	GACGTC	3 cut(s)	133, 139, 2081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.