Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0014380

Physical Location & Seq

Genomic Coordinates Reverse (-)

11190480 .. 11192768

Gene Structure 2289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g12730.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGCCAACTTGGAGCTGCTGCTACAGAAATGCGACTCTCTCATCCACATCAAAAAGCTCCAAGCCCGCCTCGTAACCCTCGGCAGATTCCAATCCTATCCCTCCATCACCATCAAGCTCCTCGAGCTCTGTGCTCTTCCCCCCGTCGCCAACCTCCCTTACGCCACCACCCTCTTCCACTACCTCCAAACTCCCTCCACACGCCACTGGAACGCCGTCGTTCGCGGCCTCGCCCAGAGCCTCCAACCCATCCAAGCCATCTCATGGTACGCCGCCATCTCCCGCTCTCCCCAACACGTTGACGCGCTCACTTGCTCCTTCGCTCTCAAAGCGTGTGCACGCGCTCTGGCGTCCTCGGAGGCCATGCAGATTCACGCGCAGGTTGTAAGGTTTGGATTCGGAGGCGATGTGTTGTTACAGACTACTTTGCTTGACGTGTACGCTAAAGTTGGGAATCTGGGTTTTGCCCAGAAGGTGTTCGACGAAATGCCGAAGAGGGATTTGGCTTGTTGGAACGCTTTGGTTGCTGGGTTGGCTCAGGGGAGCCGACCCAGTGAGGCTTTAGCTTTGTTTTGGAGGATGAATGAGGATGAGGGGTTGAAGCCGAATGAAGTGACTGTGCTCGGCGCGCTCTCGGCGTGTTCTCAACTGGGTGCGTTGAGTGGAGGAGAGAGAGTTCATGGCTTTATAGTGGATGCGAAGCTTGATACACATGTCATTGTTTGCAACGCAGTTGTTGATATGTATGCGAAATGCGGCTCTGTGGATAGAGCGTATCGGGTGTTTGAGAGTATGAACTGTGGGAAGAATCTGATTACTTGGAATACGATGATAATGGCATTTGCGATCCATGGGGATTGCGAGAAAGCGCTTGAGCTTTTTCAGAAGATGGGTAGAAATGGAGTTAGGGCTGATGCAGTGTCGTATCTTGCTGTGTTGTGTGCGTGCAATCATGGAGGACTTGTGGATTATGGCGTTAAGTTGTTTAATTCAATGGCGGGCGGTGGGATGGTGCCGAATGTTAAGCATTATGGGACTGTGGTTGATTTGTTGGGACGAGCTGGGCGACTTCAAGAGGCTTATGAGATTGTGAAATCGATGCCTATGTTTCCGGATGTAGTACTGTGGCAGACTTTGCTTGGTGCCAGCAAGACCTATGGGAATGTGGAAATGGCAGAGATGGCGTCAAGGAAACTGGTTGAGTTGGGGTCTGAGGGTTGTGGTGATTTTGTGTTGTTATCAAATGTTTACGCGGCTCACAAGAGATGGGATGATGTGGGAAGGGTGAGGGAGGCCATGAAGAGAAGGGATGTGAAGAAGGTACCGGGTTTTGGTTACATAGAAGTGGAAGGTGTGATACACAAGTTTTTGAATGGTGATCAAAGCCATGTTAACAGCTGTGAGATTTATTCAAAGCTAGATGAGATCAAATTTAGGATTAAAGACTATGGATATGTGGCAAAGACAAATCATGTGTTGCATGATATTGGAGAGGAGGAGAAAGAAAATGCATTGGGCTACCATTGTGAAAAGTTGGCTGTGGCTTTTGGTTTGATCAGCACTAGTGAGGGGACACCGATTCAGGTGATCAAGAACCTAAGAATATGTGATGATTGTCATGTGGTGATGAAACTTGTTTCAAAAGTTTATAATAGGGAAATCATTGTGAGGGATCGAGCCCGGTTTCACAGATTTCAAGACGGATTTTGTTCTTGCAGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 ThiC_Rad_SAM

Protein Analysis

577

Amino Acids

63.9

Weight (kDa)

8.29

Isoelectric Point (pI)

39.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	270 - 316	7e-10	PPR repeat family
PPR	PF01535	272 - 302	3.5e-09	PPR repeat
E_motif	PF20431	386 - 448	5.8e-19	E motif
DYW_deaminase	PF14432	484 - 576	2.9e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34160 AT1G34160
fragaria_vesca	FvH4_2g12730
malus_domestica	MD05G1037500.v1.1 MD10G1041300.v1.1
prunus_persica	Prupe.8G045500_v2.0.a1 Prupe.8G045500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0273501
rosa_laevigata	RLG00000013612
rosa_multiflora	Rmu_co8087438.1_g000001 Rmu_sc0026438.1_g000001
rosa_roxburghii	Rroxscaffold_7G00195290
rosa_rugosa	Rorug06G0075900
rosa_samantha	Rh6AG190600 Rh6BG194100 Rh6DG185200
rosa_wichuraiana	Rw6G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1650
Acc36I	ACCTGC	1 cut(s)	370
Acc65I	GGTACC	1 cut(s)	1321
AccB1I	GGYRCC	3 cut(s)	1012, 1142, 1321
AccB7I	CCANNNNNTGG	1 cut(s)	264
AccBSI	CCGCTC	1 cut(s)	285
AccII	CGCG	6 cut(s)	225, 305, 342, 377, 629, 1253
AccIII	TCCGGA	1 cut(s)	1111
AciI	CCGC	8 cut(s)	67, 225, 273, 283, 756, 998, 1002, 1253
AclWI	GGATC	2 cut(s)	841, 1680
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	1430
AcyI	GRCGYC	2 cut(s)	350, 1184
AfaI	GTAC	4 cut(s)	269, 440, 1122, 1323
AfeI	AGCGCT	1 cut(s)	870
AfiI	CCNNNNNNNGG	2 cut(s)	264, 1331
AflIII	ACRYGT	3 cut(s)	295, 435, 712
AgsI	TTSAA	7 cut(s)	601, 993, 1073, 1372, 1413, 1641, 1697
AhlI	ACTAGT	1 cut(s)	1562
AjiI	CACGTC	1 cut(s)	436
AjuI	GAANNNNNNNTTGG	2 cut(s)	485, 517
AloI	GAACNNNNNNTCC	2 cut(s)	660, 692
Alw21I	GWGCWC	4 cut(s)	129, 136, 340, 624
Alw44I	GTGCAC	1 cut(s)	336
AlwI	GGATC	2 cut(s)	841, 1680
Ama87I	CYCGRG	1 cut(s)	122
Aor13HI	TCCGGA	1 cut(s)	1111
Aor51HI	AGCGCT	1 cut(s)	870
AoxI	GGCC	4 cut(s)	3, 226, 360, 1293
ApaLI	GTGCAC	1 cut(s)	336
ApeKI	GCWGC	2 cut(s)	16, 19
ApoI	RAATTY	1 cut(s)	1430
Asp700I	GAANNNNTTC	1 cut(s)	476
Asp718I	GGTACC	1 cut(s)	1321
AspLEI	GCGC	6 cut(s)	307, 344, 379, 629, 631, 871
AsuC2I	CCSGG	2 cut(s)	1326, 1681
AsuHPI	GGTGA	6 cut(s)	100, 1235, 1297, 1388, 1597, 1636
AvaI	CYCGRG	1 cut(s)	122
BaeGI	GKGCMC	1 cut(s)	340
BaeI	ACNNNNGTAYC	4 cut(s)	699, 732, 1349, 1382
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	3 cut(s)	1012, 1142, 1321
BanII	GRGCYC	2 cut(s)	129, 1681
BarI	GAAGNNNNNNTAC	2 cut(s)	1341, 1373
Bbv12I	GWGCWC	4 cut(s)	129, 136, 340, 624
BbvI	GCAGC	2 cut(s)	3, 6
BccI	CCATC	9 cut(s)	113, 119, 257, 266, 284, 883, 1003, 1174, 1260
BceAI	ACGGC	1 cut(s)	200
BcgI	CGANNNNNNTGC	2 cut(s)	113, 147
BclI	TGATCA	3 cut(s)	1378, 1554, 1587
BcnI	CCSGG	2 cut(s)	1326, 1681
BcuI	ACTAGT	1 cut(s)	1562
BfaI	CTAG	2 cut(s)	1418, 1563
BfmI	CTRYAG	1 cut(s)	23
BfoI	RGCGCY	1 cut(s)	872
BfuAI	ACCTGC	1 cut(s)	370
BisI	GCNGC	6 cut(s)	17, 20, 226, 273, 757, 1254
BlsI	GCNGC	6 cut(s)	18, 21, 227, 274, 758, 1255
BmcAI	AGTACT	1 cut(s)	1122
Bme1390I	CCNGG	2 cut(s)	1326, 1681
BmeT110I	CYCGRG	1 cut(s)	122
BmgBI	CACGTC	1 cut(s)	436
BmiI	GGNNCC	4 cut(s)	545, 1014, 1144, 1323
BmrFI	CCNGG	2 cut(s)	1326, 1681
BmrI	ACTGGG	2 cut(s)	546, 659
BmsI	GCATC	3 cut(s)	685, 904, 1089
BmuI	ACTGGG	2 cut(s)	546, 659
Bpu10I	CCTNAGC	1 cut(s)	537
BpuEI	CTTGAG	1 cut(s)	893
BpuMI	CCSGG	2 cut(s)	1326, 1681
Bsa29I	ATCGAT	1 cut(s)	1097
BsaBI	GATNNNNATC	1 cut(s)	91
BsaHI	GRCGYC	2 cut(s)	350, 1184
BsaJI	CCNNGG	3 cut(s)	79, 354, 850
BsaWI	WCCGGW	1 cut(s)	1111
BsaXI	ACNNNNNCTCC	6 cut(s)	393, 423, 660, 690, 948, 978
Bsc4I	CCNNNNNNNGG	2 cut(s)	264, 1331
Bse1I	ACTGG	4 cut(s)	212, 552, 654, 1200
Bse8I	GATNNNNATC	1 cut(s)	91
BseAI	TCCGGA	1 cut(s)	1111
BseCI	ATCGAT	1 cut(s)	1097
BseDI	CCNNGG	3 cut(s)	79, 354, 850
BseGI	GGATG	9 cut(s)	42, 249, 585, 595, 700, 1014, 1120, 1276, 1315
BseJI	GATNNNNATC	1 cut(s)	91
BseLI	CCNNNNNNNGG	2 cut(s)	264, 1331
BseMII	CTCAG	2 cut(s)	551, 1203
BseNI	ACTGG	4 cut(s)	212, 552, 654, 1200
BsePI	GCGCGC	1 cut(s)	627
BseRI	GAGGAG	4 cut(s)	110, 681, 1508, 1511
BseSI	GKGCMC	1 cut(s)	340
BseXI	GCAGC	2 cut(s)	3, 6
BseYI	CCCAGC	2 cut(s)	527, 1061
Bsh1236I	CGCG	6 cut(s)	225, 305, 342, 377, 629, 1253
BshFI	GGCC	4 cut(s)	5, 228, 362, 1295
BshNI	GGYRCC	3 cut(s)	1012, 1142, 1321
BshVI	ATCGAT	1 cut(s)	1097
BsiHKAI	GWGCWC	4 cut(s)	129, 136, 340, 624
BsiHKCI	CYCGRG	1 cut(s)	122
BsiSI	CCGG	3 cut(s)	1112, 1325, 1681
BslFI	GGGAC	3 cut(s)	1048, 1068, 1585
BslI	CCNNNNNNNGG	2 cut(s)	264, 1331
BsmFI	GGGAC	3 cut(s)	1048, 1068, 1585
BsnI	GGCC	4 cut(s)	5, 228, 362, 1295
BsoBI	CYCGRG	1 cut(s)	122
Bsp1286I	GDGCHC	5 cut(s)	129, 136, 340, 624, 1681
Bsp13I	TCCGGA	1 cut(s)	1111
Bsp143I	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
Bsp19I	CCATGG	1 cut(s)	850
BspACI	CCGC	8 cut(s)	67, 225, 273, 283, 756, 998, 1002, 1253
BspANI	GGCC	4 cut(s)	5, 228, 362, 1295
BspCNI	CTCAG	2 cut(s)	550, 1204
BspDI	ATCGAT	1 cut(s)	1097
BspEI	TCCGGA	1 cut(s)	1111
BspFNI	CGCG	6 cut(s)	225, 305, 342, 377, 629, 1253
BspLI	GGNNCC	4 cut(s)	545, 1014, 1144, 1323
BspMI	ACCTGC	1 cut(s)	370
BspPI	GGATC	2 cut(s)	841, 1680
BspQI	GCTCTTC	1 cut(s)	141
BspT107I	GGYRCC	3 cut(s)	1012, 1142, 1321
BsrBI	CCGCTC	1 cut(s)	285
BsrI	ACTGG	4 cut(s)	212, 552, 654, 1200
BssECI	CCNNGG	3 cut(s)	79, 354, 850
BssHII	GCGCGC	1 cut(s)	627
BssMI	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
BssNI	GRCGYC	2 cut(s)	350, 1184
BssT1I	CCWWGG	1 cut(s)	850
Bst4CI	ACNGT	4 cut(s)	619, 800, 1039, 1125
Bst6I	CTCTTC	4 cut(s)	141, 179, 488, 1295
BstACI	GRCGYC	2 cut(s)	350, 1184
BstAPI	GCANNNNNTGC	1 cut(s)	1135
BstC8I	GCNNGC	6 cut(s)	67, 340, 629, 946, 1000, 1147
BstDEI	CTNAG	3 cut(s)	537, 1212, 1598
BstDSI	CCRYGG	1 cut(s)	850
BstF5I	GGATG	9 cut(s)	42, 249, 585, 595, 700, 1014, 1120, 1276, 1315
BstFNI	CGCG	6 cut(s)	225, 305, 342, 377, 629, 1253
BstH2I	RGCGCY	1 cut(s)	872
BstHHI	GCGC	6 cut(s)	307, 344, 379, 629, 631, 871
BstKTI	GATC	6 cut(s)	849, 1381, 1428, 1557, 1590, 1675
BstMBI	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
BstMWI	GCNNNNNNNGC	8 cut(s)	124, 329, 524, 533, 628, 635, 1135, 1181
BstNSI	RCATGY	1 cut(s)	716
BstSCI	CCNGG	2 cut(s)	1324, 1679
BstSFI	CTRYAG	1 cut(s)	23
BstSLI	GKGCMC	1 cut(s)	340
BstUI	CGCG	6 cut(s)	225, 305, 342, 377, 629, 1253
BstV1I	GCAGC	2 cut(s)	3, 6
Bsu15I	ATCGAT	1 cut(s)	1097
BsuRI	GGCC	4 cut(s)	5, 228, 362, 1295
BsuTUI	ATCGAT	1 cut(s)	1097
BtgI	CCRYGG	1 cut(s)	850
BtgZI	GCGATG	1 cut(s)	420
BtrI	CACGTC	1 cut(s)	436
BtsCI	GGATG	9 cut(s)	42, 249, 585, 595, 700, 1014, 1120, 1276, 1315
BtsI	GCAGTG	1 cut(s)	924
BtsIMutI	CAGTG	3 cut(s)	205, 559, 924
BveI	ACCTGC	1 cut(s)	370
Cac8I	GCNNGC	6 cut(s)	67, 340, 629, 946, 1000, 1147
CfoI	GCGC	6 cut(s)	307, 344, 379, 629, 631, 871
ClaI	ATCGAT	1 cut(s)	1097
CseI	GACGC	3 cut(s)	311, 339, 1173
Csp6I	GTAC	4 cut(s)	268, 439, 1121, 1322
CviQI	GTAC	4 cut(s)	268, 439, 1121, 1322
DdeI	CTNAG	3 cut(s)	537, 1212, 1598
DpnI	GATC	6 cut(s)	848, 1380, 1427, 1556, 1589, 1674
DpnII	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	141, 179, 488, 1295
EarI	CTCTTC	4 cut(s)	141, 179, 488, 1295
Ecl136II	GAGCTC	1 cut(s)	127
Eco130I	CCWWGG	1 cut(s)	850
Eco24I	GRGCYC	2 cut(s)	129, 1681
Eco47III	AGCGCT	1 cut(s)	870
Eco53kI	GAGCTC	1 cut(s)	127
Eco88I	CYCGRG	1 cut(s)	122
EcoICRI	GAGCTC	1 cut(s)	127
EcoT14I	CCWWGG	1 cut(s)	850
EcoT22I	ATGCAT	1 cut(s)	1513
EcoT38I	GRGCYC	2 cut(s)	129, 1681
ErhI	CCWWGG	1 cut(s)	850
FaqI	GGGAC	3 cut(s)	1048, 1068, 1585
FauI	CCCGC	3 cut(s)	74, 290, 991
FbaI	TGATCA	3 cut(s)	1378, 1554, 1587
Fnu4HI	GCNGC	6 cut(s)	17, 20, 226, 273, 757, 1254
FokI	GGATG	9 cut(s)	29, 236, 592, 602, 707, 1021, 1127, 1283, 1322
FriOI	GRGCYC	2 cut(s)	129, 1681
Fsp4HI	GCNGC	6 cut(s)	17, 20, 226, 273, 757, 1254
FspBI	CTAG	2 cut(s)	1418, 1563
GlaI	GCGC	6 cut(s)	306, 343, 378, 628, 630, 870
GluI	GCNGC	6 cut(s)	17, 20, 226, 273, 757, 1254
GsaI	CCCAGC	2 cut(s)	531, 1065
HaeII	RGCGCY	1 cut(s)	872
HaeIII	GGCC	4 cut(s)	5, 228, 362, 1295
HapII	CCGG	3 cut(s)	1112, 1325, 1681
HgaI	GACGC	3 cut(s)	311, 339, 1173
HhaI	GCGC	6 cut(s)	307, 344, 379, 629, 631, 871
Hin1I	GRCGYC	2 cut(s)	350, 1184
Hin6I	GCGC	6 cut(s)	305, 342, 377, 627, 629, 869
HinP1I	GCGC	6 cut(s)	305, 342, 377, 627, 629, 869
HincII	GTYRAC	2 cut(s)	301, 1393
HindII	GTYRAC	2 cut(s)	301, 1393
HindIII	AAGCTT	1 cut(s)	701
HinfI	GANTC	7 cut(s)	35, 87, 370, 396, 454, 808, 1579
HpaI	GTTAAC	1 cut(s)	1393
HpaII	CCGG	3 cut(s)	1112, 1325, 1681
HphI	GGTGA	6 cut(s)	100, 1235, 1297, 1388, 1597, 1636
Hpy166II	GTNNAC	5 cut(s)	301, 338, 439, 1249, 1393
Hpy188I	TCNGA	5 cut(s)	358, 401, 813, 885, 1213
Hpy188III	TCNNGA	4 cut(s)	1073, 1112, 1591, 1697
Hpy8I	GTNNAC	5 cut(s)	301, 338, 439, 1249, 1393
Hpy99I	CGWCG	3 cut(s)	149, 221, 485
HpyAV	CCTTC	6 cut(s)	328, 466, 1275, 1299, 1312, 1343
HpyCH4III	ACNGT	4 cut(s)	619, 800, 1039, 1125
HpyCH4IV	ACGT	2 cut(s)	297, 435
HpyCH4V	TGCA	8 cut(s)	338, 367, 726, 917, 948, 1480, 1511, 1716
HpyF10VI	GCNNNNNNNGC	8 cut(s)	124, 329, 524, 533, 628, 635, 1135, 1181
HpyF3I	CTNAG	3 cut(s)	537, 1212, 1598
HpySE526I	ACGT	2 cut(s)	297, 435
Hsp92I	GRCGYC	2 cut(s)	350, 1184
HspAI	GCGC	6 cut(s)	305, 342, 377, 627, 629, 869
Kpn2I	TCCGGA	1 cut(s)	1111
KpnI	GGTACC	1 cut(s)	1325
Ksp22I	TGATCA	3 cut(s)	1378, 1554, 1587
KspAI	GTTAAC	1 cut(s)	1393
Kzo9I	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
LguI	GCTCTTC	1 cut(s)	141
LmnI	GCTCC	5 cut(s)	13, 63, 123, 320, 543
Lsp1109I	GCAGC	2 cut(s)	3, 6
LweI	GCATC	3 cut(s)	685, 904, 1089
MaeI	CTAG	2 cut(s)	1418, 1563
MaeII	ACGT	2 cut(s)	297, 435
MaeIII	GTNAC	4 cut(s)	73, 414, 613, 1334
MalI	GATC	6 cut(s)	848, 1380, 1427, 1556, 1589, 1674
MbiI	CCGCTC	1 cut(s)	285
MboI	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
MboII	GAAGA	7 cut(s)	128, 166, 505, 817, 898, 1312, 1327
MhlI	GDGCHC	5 cut(s)	129, 136, 340, 624, 1681
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	2 cut(s)	988, 1430
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	29
MmeI	TCCRAC	2 cut(s)	268, 491
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1513
MroI	TCCGGA	1 cut(s)	1111
MroXI	GAANNNNTTC	1 cut(s)	476
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	978, 987, 1023, 1392, 1440
MslI	CAYNNNNRTG	1 cut(s)	1343
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1398
MspI	CCGG	3 cut(s)	1112, 1325, 1681
MspR9I	CCNGG	2 cut(s)	1326, 1681
MvnI	CGCG	6 cut(s)	225, 305, 342, 377, 629, 1253
MwoI	GCNNNNNNNGC	8 cut(s)	124, 329, 524, 533, 628, 635, 1135, 1181
NciI	CCSGG	2 cut(s)	1326, 1681
NcoI	CCATGG	1 cut(s)	850
NdeII	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
NlaIV	GGNNCC	4 cut(s)	545, 1014, 1144, 1323
NmeAIII	GCCGAG	3 cut(s)	60, 603, 614
NmuCI	GTSAC	1 cut(s)	613
NsiI	ATGCAT	1 cut(s)	1513
NspI	RCATGY	1 cut(s)	716
PaeR7I	CTCGAG	1 cut(s)	122
PauI	GCGCGC	1 cut(s)	627
PciI	ACATGT	1 cut(s)	712
PciSI	GCTCTTC	1 cut(s)	141
PcsI	WCGNNNNNNNCGW	1 cut(s)	1063
PdmI	GAANNNNTTC	1 cut(s)	476
PfeI	GAWTC	6 cut(s)	87, 370, 396, 454, 808, 1579
PflMI	CCANNNNNTGG	1 cut(s)	264
PkrI	GCNGC	6 cut(s)	18, 21, 227, 274, 758, 1255
PleI	GAGTC	1 cut(s)	29
PpsI	GAGTC	1 cut(s)	29
PscI	ACATGT	1 cut(s)	712
PsiI	TTATAA	1 cut(s)	1650
Psp124BI	GAGCTC	1 cut(s)	129
PspFI	CCCAGC	2 cut(s)	527, 1061
PspN4I	GGNNCC	4 cut(s)	545, 1014, 1144, 1323
PspXI	VCTCGAGB	1 cut(s)	122
PteI	GCGCGC	1 cut(s)	627
PvuII	CAGCTG	1 cut(s)	1398
RsaI	GTAC	4 cut(s)	269, 440, 1122, 1323
RsaNI	GTAC	4 cut(s)	268, 439, 1121, 1322
RseI	CAYNNNNRTG	1 cut(s)	1343
SacI	GAGCTC	1 cut(s)	129
SapI	GCTCTTC	1 cut(s)	141
SaqAI	TTAA	5 cut(s)	978, 987, 1023, 1392, 1440
SatI	GCNGC	6 cut(s)	17, 20, 226, 273, 757, 1254
Sau3AI	GATC	6 cut(s)	846, 1378, 1425, 1554, 1587, 1672
ScaI	AGTACT	1 cut(s)	1122
SchI	GAGTC	1 cut(s)	29
ScrFI	CCNGG	2 cut(s)	1326, 1681
SduI	GDGCHC	5 cut(s)	129, 136, 340, 624, 1681
SfaNI	GCATC	3 cut(s)	685, 904, 1089
SfcI	CTRYAG	1 cut(s)	23
Sfr274I	CTCGAG	1 cut(s)	122
SlaI	CTCGAG	1 cut(s)	122
SmiMI	CAYNNNNRTG	1 cut(s)	1343
SmlI	CTYRAG	2 cut(s)	122, 872
SmoI	CTYRAG	2 cut(s)	122, 872
SpeI	ACTAGT	1 cut(s)	1562
Sse9I	AATT	2 cut(s)	988, 1430
SsiI	CCGC	8 cut(s)	67, 225, 273, 283, 756, 998, 1002, 1253
SspMI	CTAG	2 cut(s)	1418, 1563
SstI	GAGCTC	1 cut(s)	129
StyD4I	CCNGG	2 cut(s)	1324, 1679
StyI	CCWWGG	1 cut(s)	850
TaaI	ACNGT	4 cut(s)	619, 800, 1039, 1125
TaiI	ACGT	2 cut(s)	300, 438
TaqI	TCGA	4 cut(s)	123, 480, 1097, 1675
TasI	AATT	2 cut(s)	988, 1430
TatI	WGTACW	1 cut(s)	1120
TauI	GCSGC	4 cut(s)	228, 275, 759, 1256
TfiI	GAWTC	6 cut(s)	87, 370, 396, 454, 808, 1579
Tru1I	TTAA	5 cut(s)	978, 987, 1023, 1392, 1440
Tru9I	TTAA	5 cut(s)	978, 987, 1023, 1392, 1440
TscAI	CASTG	3 cut(s)	212, 559, 924
TseFI	GTSAC	1 cut(s)	613
TseI	GCWGC	2 cut(s)	16, 19
Tsp45I	GTSAC	1 cut(s)	613
TspDTI	ATGAA	6 cut(s)	596, 624, 668, 809, 1313, 1643
TspGWI	ACGGA	1 cut(s)	1716
TspRI	CASTG	3 cut(s)	212, 559, 924
Van91I	CCANNNNNTGG	1 cut(s)	264
VneI	GTGCAC	1 cut(s)	336
XapI	RAATTY	1 cut(s)	1430
XceI	RCATGY	1 cut(s)	716
XhoI	CTCGAG	1 cut(s)	122
XmnI	GAANNNNTTC	1 cut(s)	476
XspI	CTAG	2 cut(s)	1418, 1563
ZrmI	AGTACT	1 cut(s)	1122
Zsp2I	ATGCAT	1 cut(s)	1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.