RLG00000013612

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0014380
Physical Location & Seq
Forward (+)
34049453 .. 34051183
1731 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013612

Sequence Viewer

Length: 1731 bp
ATGGCCAACTTGGAGTTGTTGTTACAGAAATGCGACTCTCTCACCCACATCAAACAGCTCCAAGCCCACCTCTTAACCATTGGTCGATTCCAACTCTACCCCTCCATCACCATCAAGCTCCTCGAGCTCTGTGCTCTTCCCCCCATCGCCAATCTCCCTTACGCCACAACCCTCTTCCACCAACTCCAAAGCCCTTCCACCAGGCACTGGAACGCCGTCGTTCGAGGCCTCGCTCAGACCCTCCAACCGACCCAAGCCATCACATGGTACGCCACCATGTCGCGCTCTTCCCAAAAGGTCGACGCGCTCACCTGCTCCTTCGCTCTCAAAGCGTGTGCACGCGCTCTGGCCTTGTCCGAGGCCATGCAGATTCACTCTCAGCTTCTGCGTTTTGGGTTCGGAGGCGATGTGTTGTTGCGAACTACTTTGCTTGATGTGTATGCGAAAGTTGGGAAGCTGGGTTTTGCGCAGAAGGTGTTCGACGAAATGCCTGAGAGGGATGTAGCTTGTTGGAATGCTTTGGTTGCTGGGTTGGCTCAGGGGAGTCAACCCAGTGAGGCTTTAGCTTTGTTTGAGAGAATGACTGAGGAGGAGGGGTTAAAGCCCAATGAAGTCACTGTGCTCGGTGCGCTCTCGGCGTGTTCTCAATTGGGTGCATTGAGACGTGGAGAAAGAATACATACCTATATAGTGAATGCGAAGCTTGATACGCATGTCATTGTTTGCAATGCGGTTATTGATATGTATGCGAAATGCGGCTTTGTGGATACAGCGTATCAGGTGTTTGAGAATATGAGATGTGGGAAGAATTTGATATCTTGGAATACGATGATAATGGCATTTGCTATGCATGGCGATGGTTGTAAAGCGCTTGAGCTTTTTGAGAAGATGGGTAAAAATGCAGTGTGCCCTGATGCAGTGTCGTATCTTGCTGCGTTGTGTGCGTGCAATCATGCAGGACTGGTAGAAGATGGGGTTAAGTTATTTAATTCAATGACGGGCGGTGGGATGGTGCCGAATGTTAAGCATTATGGGACTGTGGTTGATTTGTTGGGACGAGCTGGGCGACTTCAAGAGGCTTATGATATTGTGAAATCTATGCCGATGTTTCCTGATGTAGTACTGTGGCAGACTTTGCTTGGTGCCAGCAAGACCTATGGGAATGTGGAAATGGCAGAGATGGCGTCACGGAACTTGGTTGAGTTGGGGTCTGAGGGTTGTGGTGATTTCGTGTTGTTATCAAATGTTTATGCGGCTCACAAGAGATGGGATGATGTAGGCAGGGTGAGGGAAGCCATGAAGAGAAGGGATGTGAAGAAGATACCGGGTTTCGGTTACATAGAAGTAGAAGGTGTGATACACAAATTTTTGAATGGTGATCAAAACCATGTTAATAGGCATGAGATTTATTCAAAGCTAGATGAAATCAATTGCAGGATTAAAGCCTATGGATATGTTGCAAAGACAAATCATGTGTTGCATGATATTGGGGAGGAGGACAAAGAAAATGCATTGAGCTACCATTGTGAGAAGTTGGCTGTGGCTTTTGGTTTGATCAGCACTGATGAGGGGACACCAATTCAGGTGATTAAGAACCTAAGAATATGTGATGATTGTCATGTCGTGATGAAACTTATTTCAGAAATTTATAATAGGGAAATTATTGTAAGGGATCGAGCCCGGTTTCACAGATTTCAAGATGGACTTTGTTCTTGCAGAGATTATTGGTGA

Protein Analysis

577

Amino Acids

64.17

Weight (kDa)

7.01

Isoelectric Point (pI)

41.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 166 - 214 4.6e-06 PPR repeat family
PPR_2 PF13041 270 - 316 1.8e-08 PPR repeat family
E_motif PF20431 386 - 448 5.6e-19 E motif
DYW_deaminase PF14432 484 - 576 8.2e-39 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014380)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34160 AT1G34160
fragaria_vesca FvH4_2g12730
malus_domestica MD05G1037500.v1.1 MD10G1041300.v1.1
prunus_persica Prupe.8G045500_v2.0.a1 Prupe.8G045500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0273501
rosa_laevigata RLG00000013612
rosa_multiflora Rmu_co8087438.1_g000001 Rmu_sc0026438.1_g000001
rosa_roxburghii Rroxscaffold_7G00195290
rosa_rugosa Rorug06G0075900
rosa_samantha Rh6AG190600 Rh6BG194100 Rh6DG185200
rosa_wichuraiana Rw6G016680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1650
AarI CACCTGC 1 cut(s) 320
Acc16I TGCGCA 1 cut(s) 468
Acc36I ACCTGC 1 cut(s) 320
AccB1I GGYRCC 2 cut(s) 1012, 1142
AccB7I CCANNNNNTGG 2 cut(s) 207, 264
AccI GTMKAC 1 cut(s) 300
AccII CGCG 3 cut(s) 283, 305, 342
AciI CCGC 4 cut(s) 731, 756, 1002, 1253
AclWI GGATC 1 cut(s) 1680
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 808, 1364, 1644
AcyI GRCGYC 1 cut(s) 1184
AfaI GTAC 2 cut(s) 269, 1122
AfeI AGCGCT 1 cut(s) 870
AfiI CCNNNNNNNGG 3 cut(s) 207, 264, 1331
AgsI TTSAA 5 cut(s) 993, 1073, 1372, 1413, 1697
AjiI CACGTC 1 cut(s) 665
AjnI CCWGG 1 cut(s) 200
Alw21I GWGCWC 4 cut(s) 129, 136, 340, 624
Alw26I GTCTC 1 cut(s) 655
Alw44I GTGCAC 1 cut(s) 336
AlwI GGATC 1 cut(s) 1680
AlwNI CAGNNNCTG 2 cut(s) 207, 385
Ama87I CYCGRG 1 cut(s) 122
Aor51HI AGCGCT 1 cut(s) 870
AoxI GGCC 4 cut(s) 3, 226, 348, 360
ApaLI GTGCAC 1 cut(s) 336
ApeKI GCWGC 1 cut(s) 932
ApoI RAATTY 3 cut(s) 808, 1364, 1644
Asp700I GAANNNNTTC 1 cut(s) 476
AspLEI GCGC 6 cut(s) 285, 307, 344, 469, 631, 871
AsuC2I CCSGG 2 cut(s) 1326, 1681
AsuHPI GGTGA 7 cut(s) 34, 100, 301, 1235, 1297, 1388, 1597
AvaI CYCGRG 1 cut(s) 122
BaeGI GKGCMC 2 cut(s) 340, 911
BaeI ACNNNNGTAYC 2 cut(s) 699, 732
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 1012, 1142
BanII GRGCYC 2 cut(s) 129, 1681
BarI GAAGNNNNNNTAC 2 cut(s) 1341, 1373
Bbv12I GWGCWC 4 cut(s) 129, 136, 340, 624
BbvI GCAGC 1 cut(s) 919
BceAI ACGGC 1 cut(s) 200
BcgI CGANNNNNNTGC 2 cut(s) 113, 147
BciT130I CCWGG 1 cut(s) 202
BciVI GTATCC 1 cut(s) 760
BclI TGATCA 2 cut(s) 1378, 1554
BcnI CCSGG 2 cut(s) 1326, 1681
BcoDI GTCTC 1 cut(s) 655
BfaI CTAG 1 cut(s) 1418
BfoI RGCGCY 1 cut(s) 872
BfuAI ACCTGC 1 cut(s) 320
BfuI GTATCC 1 cut(s) 760
BisI GCNGC 3 cut(s) 757, 933, 1254
BlsI GCNGC 3 cut(s) 758, 934, 1255
BmcAI AGTACT 1 cut(s) 1122
Bme1390I CCNGG 3 cut(s) 202, 1326, 1681
BmeT110I CYCGRG 1 cut(s) 122
BmgBI CACGTC 1 cut(s) 665
BmiI GGNNCC 2 cut(s) 1014, 1144
BmrFI CCNGG 3 cut(s) 202, 1326, 1681
BmrI ACTGGG 1 cut(s) 546
BmsI GCATC 1 cut(s) 904
BmuI ACTGGG 1 cut(s) 546
Bpu10I CCTNAGC 1 cut(s) 537
BpuEI CTTGAG 1 cut(s) 893
BpuMI CCSGG 2 cut(s) 1326, 1681
BsaHI GRCGYC 1 cut(s) 1184
BsaJI CCNNGG 1 cut(s) 357
BsaXI ACNNNNNCTCC 6 cut(s) 5, 35, 393, 423, 581, 611
Bsc4I CCNNNNNNNGG 3 cut(s) 207, 264, 1331
Bse1I ACTGG 3 cut(s) 212, 552, 966
Bse3DI GCAATG 1 cut(s) 733
BseBI CCWGG 1 cut(s) 202
BseDI CCNNGG 1 cut(s) 357
BseGI GGATG 4 cut(s) 505, 1014, 1276, 1315
BseLI CCNNNNNNNGG 3 cut(s) 207, 264, 1331
BseMI GCAATG 1 cut(s) 733
BseMII CTCAG 6 cut(s) 248, 392, 483, 551, 576, 1203
BseNI ACTGG 3 cut(s) 212, 552, 966
BseRI GAGGAG 4 cut(s) 110, 602, 605, 1508
BseSI GKGCMC 2 cut(s) 340, 911
BseXI GCAGC 1 cut(s) 919
BseYI CCCAGC 3 cut(s) 457, 527, 1061
Bsh1236I CGCG 3 cut(s) 283, 305, 342
BshFI GGCC 4 cut(s) 5, 228, 350, 362
BshNI GGYRCC 2 cut(s) 1012, 1142
BsiHKAI GWGCWC 4 cut(s) 129, 136, 340, 624
BsiHKCI CYCGRG 1 cut(s) 122
BsiSI CCGG 2 cut(s) 1325, 1681
BslFI GGGAC 3 cut(s) 1048, 1068, 1585
BslI CCNNNNNNNGG 3 cut(s) 207, 264, 1331
BsmAI GTCTC 1 cut(s) 655
BsmBI CGTCTC 1 cut(s) 655
BsmFI GGGAC 3 cut(s) 1048, 1068, 1585
BsmI GAATGC 2 cut(s) 520, 700
BsnI GGCC 4 cut(s) 5, 228, 350, 362
BsoBI CYCGRG 1 cut(s) 122
Bsp1286I GDGCHC 6 cut(s) 129, 136, 340, 624, 911, 1681
Bsp143I GATC 3 cut(s) 1378, 1554, 1672
BspACI CCGC 4 cut(s) 731, 756, 1002, 1253
BspANI GGCC 4 cut(s) 5, 228, 350, 362
BspCNI CTCAG 6 cut(s) 247, 391, 484, 550, 577, 1204
BspFNI CGCG 3 cut(s) 283, 305, 342
BspLI GGNNCC 2 cut(s) 1014, 1144
BspMI ACCTGC 1 cut(s) 320
BspPI GGATC 1 cut(s) 1680
BspQI GCTCTTC 2 cut(s) 141, 292
BspT107I GGYRCC 2 cut(s) 1012, 1142
BsrDI GCAATG 1 cut(s) 733
BsrI ACTGG 3 cut(s) 212, 552, 966
BssECI CCNNGG 1 cut(s) 357
BssMI GATC 3 cut(s) 1378, 1554, 1672
BssNI GRCGYC 1 cut(s) 1184
Bst2UI CCWGG 1 cut(s) 202
Bst4CI ACNGT 3 cut(s) 619, 1039, 1125
Bst6I CTCTTC 4 cut(s) 141, 179, 292, 1295
BstACI GRCGYC 1 cut(s) 1184
BstAPI GCANNNNNTGC 1 cut(s) 1135
BstC8I GCNNGC 3 cut(s) 340, 946, 1147
BstDEI CTNAG 7 cut(s) 234, 378, 492, 537, 585, 1212, 1598
BstF5I GGATG 4 cut(s) 505, 1014, 1276, 1315
BstFNI CGCG 3 cut(s) 283, 305, 342
BstH2I RGCGCY 1 cut(s) 872
BstHHI GCGC 6 cut(s) 285, 307, 344, 469, 631, 871
BstKTI GATC 3 cut(s) 1381, 1557, 1675
BstMAI GTCTC 1 cut(s) 655
BstMBI GATC 3 cut(s) 1378, 1554, 1672
BstNI CCWGG 1 cut(s) 202
BstNSI RCATGY 1 cut(s) 716
BstSCI CCNGG 3 cut(s) 200, 1324, 1679
BstSLI GKGCMC 2 cut(s) 340, 911
BstUI CGCG 3 cut(s) 283, 305, 342
BstV1I GCAGC 1 cut(s) 919
BsuI GTATCC 1 cut(s) 760
BsuRI GGCC 4 cut(s) 5, 228, 350, 362
BtgZI GCGATG 3 cut(s) 130, 420, 870
BtrI CACGTC 1 cut(s) 665
BtsCI GGATG 4 cut(s) 505, 1014, 1276, 1315
BtsI GCAGTG 2 cut(s) 909, 924
BtsIMutI CAGTG 6 cut(s) 205, 559, 615, 909, 924, 1560
BveI ACCTGC 1 cut(s) 320
Cac8I GCNNGC 3 cut(s) 340, 946, 1147
CaiI CAGNNNCTG 2 cut(s) 207, 385
CfoI GCGC 6 cut(s) 285, 307, 344, 469, 631, 871
CseI GACGC 2 cut(s) 311, 1173
Csp6I GTAC 2 cut(s) 268, 1121
CviQI GTAC 2 cut(s) 268, 1121
DdeI CTNAG 7 cut(s) 234, 378, 492, 537, 585, 1212, 1598
DpnI GATC 3 cut(s) 1380, 1556, 1674
DpnII GATC 3 cut(s) 1378, 1554, 1672
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 141, 179, 292, 1295
EarI CTCTTC 4 cut(s) 141, 179, 292, 1295
Ecl136II GAGCTC 1 cut(s) 127
Eco147I AGGCCT 1 cut(s) 228
Eco24I GRGCYC 2 cut(s) 129, 1681
Eco32I GATATC 1 cut(s) 816
Eco47III AGCGCT 1 cut(s) 870
Eco53kI GAGCTC 1 cut(s) 127
Eco88I CYCGRG 1 cut(s) 122
EcoICRI GAGCTC 1 cut(s) 127
EcoRII CCWGG 1 cut(s) 200
EcoRV GATATC 1 cut(s) 816
EcoT22I ATGCAT 2 cut(s) 852, 1513
EcoT38I GRGCYC 2 cut(s) 129, 1681
Esp3I CGTCTC 1 cut(s) 655
FalI AAGNNNNNCTT 2 cut(s) 1689, 1721
FaqI GGGAC 3 cut(s) 1048, 1068, 1585
FbaI TGATCA 2 cut(s) 1378, 1554
FblI GTMKAC 1 cut(s) 300
Fnu4HI GCNGC 3 cut(s) 757, 933, 1254
FokI GGATG 4 cut(s) 512, 1021, 1283, 1322
FriOI GRGCYC 2 cut(s) 129, 1681
Fsp4HI GCNGC 3 cut(s) 757, 933, 1254
FspBI CTAG 1 cut(s) 1418
FspI TGCGCA 1 cut(s) 468
GlaI GCGC 6 cut(s) 284, 306, 343, 468, 630, 870
GluI GCNGC 3 cut(s) 757, 933, 1254
GsaI CCCAGC 3 cut(s) 461, 531, 1065
HaeII RGCGCY 1 cut(s) 872
HaeIII GGCC 4 cut(s) 5, 228, 350, 362
HapII CCGG 2 cut(s) 1325, 1681
HgaI GACGC 2 cut(s) 311, 1173
HhaI GCGC 6 cut(s) 285, 307, 344, 469, 631, 871
Hin1I GRCGYC 1 cut(s) 1184
Hin6I GCGC 6 cut(s) 283, 305, 342, 467, 629, 869
HinP1I GCGC 6 cut(s) 283, 305, 342, 467, 629, 869
HincII GTYRAC 2 cut(s) 301, 548
HindII GTYRAC 2 cut(s) 301, 548
HindIII AAGCTT 1 cut(s) 701
HinfI GANTC 4 cut(s) 35, 87, 370, 544
HpaII CCGG 2 cut(s) 1325, 1681
HphI GGTGA 7 cut(s) 34, 100, 301, 1235, 1297, 1388, 1597
Hpy166II GTNNAC 3 cut(s) 301, 338, 548
Hpy188I TCNGA 5 cut(s) 237, 358, 401, 1213, 1642
Hpy188III TCNNGA 4 cut(s) 1073, 1112, 1624, 1697
Hpy8I GTNNAC 3 cut(s) 301, 338, 548
Hpy99I CGWCG 3 cut(s) 221, 305, 485
HpyAV CCTTC 5 cut(s) 204, 328, 466, 1299, 1343
HpyCH4III ACNGT 3 cut(s) 619, 1039, 1125
HpyCH4IV ACGT 1 cut(s) 664
HpyF3I CTNAG 7 cut(s) 234, 378, 492, 537, 585, 1212, 1598
HpySE526I ACGT 1 cut(s) 664
Hsp92I GRCGYC 1 cut(s) 1184
HspAI GCGC 6 cut(s) 283, 305, 342, 467, 629, 869
Ksp22I TGATCA 2 cut(s) 1378, 1554
Kzo9I GATC 3 cut(s) 1378, 1554, 1672
LguI GCTCTTC 2 cut(s) 141, 292
LmnI GCTCC 3 cut(s) 63, 123, 320
Lsp1109I GCAGC 1 cut(s) 919
LweI GCATC 1 cut(s) 904
MaeI CTAG 1 cut(s) 1418
MaeII ACGT 1 cut(s) 664
MaeIII GTNAC 4 cut(s) 21, 613, 1185, 1334
MalI GATC 3 cut(s) 1380, 1556, 1674
MboI GATC 3 cut(s) 1378, 1554, 1672
MboII GAAGA 9 cut(s) 128, 166, 279, 817, 898, 980, 1312, 1327, 1330
MfeI CAATTG 2 cut(s) 647, 1429
MhlI GDGCHC 6 cut(s) 129, 136, 340, 624, 911, 1681
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 647, 808, 988, 1364, 1429, 1578, 1644, 1659
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 29, 553
MmeI TCCRAC 3 cut(s) 115, 268, 491
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 852, 1513
MroXI GAANNNNTTC 1 cut(s) 476
MscI TGGCCA 1 cut(s) 5
MseI TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
MslI CAYNNNNRTG 1 cut(s) 855
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 1325, 1681
MspR9I CCNGG 3 cut(s) 202, 1326, 1681
MunI CAATTG 2 cut(s) 647, 1429
Mva1269I GAATGC 2 cut(s) 520, 700
MvaI CCWGG 1 cut(s) 202
MvnI CGCG 3 cut(s) 283, 305, 342
NciI CCSGG 2 cut(s) 1326, 1681
NdeII GATC 3 cut(s) 1378, 1554, 1672
NlaIV GGNNCC 2 cut(s) 1014, 1144
NmeAIII GCCGAG 1 cut(s) 614
NmuCI GTSAC 2 cut(s) 613, 1185
NsbI TGCGCA 1 cut(s) 468
NsiI ATGCAT 2 cut(s) 852, 1513
NspI RCATGY 1 cut(s) 716
PaeR7I CTCGAG 1 cut(s) 122
PaqCI CACCTGC 1 cut(s) 320
PceI AGGCCT 1 cut(s) 228
PciSI GCTCTTC 2 cut(s) 141, 292
PcsI WCGNNNNNNNCGW 1 cut(s) 1063
PctI GAATGC 2 cut(s) 520, 700
PdmI GAANNNNTTC 1 cut(s) 476
PfeI GAWTC 2 cut(s) 87, 370
PflMI CCANNNNNTGG 2 cut(s) 207, 264
PkrI GCNGC 3 cut(s) 758, 934, 1255
PleI GAGTC 2 cut(s) 29, 552
PpsI GAGTC 2 cut(s) 29, 552
PsiI TTATAA 1 cut(s) 1650
Psp124BI GAGCTC 1 cut(s) 129
Psp6I CCWGG 1 cut(s) 200
PspFI CCCAGC 3 cut(s) 457, 527, 1061
PspGI CCWGG 1 cut(s) 200
PspN4I GGNNCC 2 cut(s) 1014, 1144
PspXI VCTCGAGB 1 cut(s) 122
PstNI CAGNNNCTG 2 cut(s) 207, 385
RsaI GTAC 2 cut(s) 269, 1122
RsaNI GTAC 2 cut(s) 268, 1121
RseI CAYNNNNRTG 1 cut(s) 855
SacI GAGCTC 1 cut(s) 129
SalI GTCGAC 1 cut(s) 299
SapI GCTCTTC 2 cut(s) 141, 292
SaqAI TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
SatI GCNGC 3 cut(s) 757, 933, 1254
Sau3AI GATC 3 cut(s) 1378, 1554, 1672
ScaI AGTACT 1 cut(s) 1122
SchI GAGTC 2 cut(s) 29, 553
ScrFI CCNGG 3 cut(s) 202, 1326, 1681
SduI GDGCHC 6 cut(s) 129, 136, 340, 624, 911, 1681
SfaNI GCATC 1 cut(s) 904
Sfr274I CTCGAG 1 cut(s) 122
SlaI CTCGAG 1 cut(s) 122
SmiMI CAYNNNNRTG 1 cut(s) 855
SmlI CTYRAG 2 cut(s) 122, 872
SmoI CTYRAG 2 cut(s) 122, 872
Sse9I AATT 8 cut(s) 647, 808, 988, 1364, 1429, 1578, 1644, 1659
SseBI AGGCCT 1 cut(s) 228
SsiI CCGC 4 cut(s) 731, 756, 1002, 1253
SspMI CTAG 1 cut(s) 1418
SstI GAGCTC 1 cut(s) 129
StuI AGGCCT 1 cut(s) 228
StyD4I CCNGG 3 cut(s) 200, 1324, 1679
TaaI ACNGT 3 cut(s) 619, 1039, 1125
TaiI ACGT 1 cut(s) 667
TaqI TCGA 6 cut(s) 85, 123, 223, 300, 480, 1675
TasI AATT 8 cut(s) 647, 808, 988, 1364, 1429, 1578, 1644, 1659
TatI WGTACW 1 cut(s) 1120
TauI GCSGC 2 cut(s) 759, 1256
TfiI GAWTC 2 cut(s) 87, 370
Tru1I TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
Tru9I TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
TscAI CASTG 6 cut(s) 212, 559, 622, 909, 924, 1567
TseFI GTSAC 2 cut(s) 613, 1185
TseI GCWGC 1 cut(s) 932
Tsp45I GTSAC 2 cut(s) 613, 1185
TspDTI ATGAA 4 cut(s) 624, 1313, 1437, 1643
TspGWI ACGGA 1 cut(s) 1204
TspRI CASTG 6 cut(s) 212, 559, 622, 909, 924, 1567
Van91I CCANNNNNTGG 2 cut(s) 207, 264
VneI GTGCAC 1 cut(s) 336
XapI RAATTY 3 cut(s) 808, 1364, 1644
XceI RCATGY 1 cut(s) 716
XhoI CTCGAG 1 cut(s) 122
XmiI GTMKAC 1 cut(s) 300
XmnI GAANNNNTTC 1 cut(s) 476
XspI CTAG 1 cut(s) 1418
ZrmI AGTACT 1 cut(s) 1122
Zsp2I ATGCAT 2 cut(s) 852, 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.