Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0016566

Physical Location & Seq

Genomic Coordinates Forward (+)

14724400 .. 14726304

Gene Structure 1905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g16980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGAGAGCCGTCTCCAAGTTCAAACACAAACCATGGCCTCCACTTCCACTCTCACGTCCTTCCTCTCACGTGGCCACCGTCGCAGAATCACCGACTCTGATCGAACACTTCACCCAATACTGCTACCAGCGAGACCTCCCCAGAGCCATGACCGCCATGGAAGCTATGCAAAGACGCGGAATCTGGGCCGACTCCGTCGTCTACTCTGACCTCATCAAATGCTGCCTGGCTCGTCGCGCCGTTCAACAAGGCAGGCTCGTCCACAAGCACGTCTTCTCAAATGGGCGCCACCCACAAACCTTCTTAATCAACATTCTCATCAACATGTATGTTAAATTCTCTTTACTGGAAGAAGCACAGCACCTGTTCGATGAAATGCGTCAGAGGAATGTGATTTCCTGGACGACTATGATTTCGGCTTACTGTCGTGCCAAGATGAACAGTAAGGCCTTGGAGGCTTTGGTTTTGATGGTTAGAGAGGGTGTGTGGCCGAATAGCTTTACATACTCTTCGGTTTTGAGGGCCTGCGAGGGGTTGTGGGATCTCAAGCAGCTGCATTGTAGTATTGTTAAAGCTGGGTTGGAGTCTGATGTGTTTGTTCGGAGTGCGTTGATTGATGTGTACTCGAAATTGGGTGACTTGAGGAACGCGATGGGTGTTTTCGATGAGATGGTGACTGGGGATTCGGTTGTTTGGAGCTCTATAGTTGGGGCGTTTGCACAGAACAGTGACGGTCATGAAGCGCTGGATCTTTTCAAGAGGATGAAGAGAGCAGGTTTTGGAGCTGAAGAGGCGACGTTGACGAGTGTTTTAAGAGCGTGCACGGCGTTGGCACTTTTGGAACTGGGCAGACAAGTACATGTTCATGCAATGAAGTATGGTCCGGATTTGATTCTAAACAACGCACTTCTGGATATGTATTGCAAGTGTGGTAGTTTGGAAGATGCAAACAGTGTTTTTACGAGGATGGTGGAGAAGGATGTAATATCTTGGAGCACCATGATTGCAGGGTTGGCACAAAATGGTTTCAGCCAAGAGGCACTGAAGTTGTTCGAGGAAATGAAGGTTTCAGGGACAAAACCAAACTACATCACAGTTCTTGGGGTTATGTTTGCTTGTAGTCATGCAGGGCTTTTAGACGAGGGGTGGTACTACTTCCAGAATATGAGGCAGCTATTCAGGATTGATCCTGGAAGAGAGCACTATGGTTGTGTTATTGATCTTCTTGGAAGGGCTGGAAAGCTTGATGAGGCAGCAAGGTTGATTCAAGAAATGGAATGTGAACCAGATGCAGTGACATGGAGGACTTTGCTTGGCGCATGCAGGGTTCATCAAAATGTTGATCTAGCTACACATGCTGCCAAACAAATTTTGAAAATGGACCCTGATGATGCTGGAACCTACATCTTATTATCAAATCTATATGCAATATCTCAGAGATGGGATGATGTTGCAGAAGTTAGGAAGAGTATGAGAGCCAGAGGAATTACTAAAGAACCGGGATGCAGTTGGATTGAGGTGAACAAACAGATCCATGCTTTTATTATGGGAGATGACTCGCACCCACAAATAGATGAGATCAATAAGCAACTGAGCATGTTGATTGATAGACTCATGGGAATAGGTTATGTTCCAGATACAAATTTTGTTTTGCAAGATCTTGAGGGGGAACAAAGGGAGGCTTCACTTCAATCTCACAGTGAGAGACTGGCGATTGTATTTGGTATAATGAACTTGCCCAAGGGAACGATTGTTAGGGTCAGGAAAAACCTCAGGATATGTGGAGATTGTCATGAATTTGCAAAACTTGTAGCAAAGTTGAAGCAGAGAACTATTGTGATAAGAGATCCCATTCGGTATCACCATTTTCAAGATGGAGAATGTTCATGTGGAGATTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

635

Amino Acids

71.77

Weight (kDa)

7.28

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	129 - 176	9.7e-12	PPR repeat family
PPR	PF01535	132 - 162	2.9e-06	PPR repeat
PPR	PF01535	230 - 260	5.4e-06	PPR repeat
PPR_1	PF12854	324 - 355	6.1e-06	PPR repeat
PPR_2	PF13041	326 - 366	3.5e-09	PPR repeat family
PPR	PF01535	329 - 358	2.8e-08	PPR repeat
E_motif	PF20431	444 - 506	2.3e-22	E motif
DYW_deaminase	PF14432	542 - 634	2.5e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0016566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03880
fragaria_vesca	FvH4_2g16980
malus_domestica	MD05G1142000.v1.1 MD05G1142900.v1.1
prunus_persica	Prupe.8G181700_v2.0.a1
pyrus_communis	pycom05g13740
rosa_chinensis	RchiOBHm_Chr6g0281171
rosa_laevigata	RLG00000012988
rosa_multiflora	Rmu_sc0001705.1_g000021 Rmu_sc0035650.1_g000002
rosa_roxburghii	Rroxscaffold_7G00187240
rosa_rugosa	Rorug06G0139500
rosa_samantha	Rh6DG245900
rosa_wichuraiana	Rw6G021820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	197
Acc36I	ACCTGC	1 cut(s)	764
AccB1I	GGYRCC	1 cut(s)	285
AccI	GTMKAC	1 cut(s)	201
AccII	CGCG	3 cut(s)	177, 237, 650
AccIII	TCCGGA	1 cut(s)	883
AciI	CCGC	2 cut(s)	153, 177
AclWI	GGATC	5 cut(s)	549, 756, 1181, 1525, 1841
AcoI	YGGCCR	2 cut(s)	72, 488
AcsI	RAATTY	4 cut(s)	335, 1368, 1642, 1796
AcuI	CTGAAG	2 cut(s)	807, 1064
AcvI	CACGTG	1 cut(s)	70
AcyI	GRCGYC	1 cut(s)	286
AfaI	GTAC	3 cut(s)	623, 858, 1151
AfeI	AGCGCT	1 cut(s)	744
AfiI	CCNNNNNNNGG	1 cut(s)	531
AflIII	ACRYGT	2 cut(s)	324, 859
AgsI	TTSAA	8 cut(s)	22, 245, 757, 1268, 1375, 1691, 1822, 1871
AjiI	CACGTC	2 cut(s)	56, 271
AjnI	CCWGG	3 cut(s)	225, 398, 1189
AluBI	AGCT	9 cut(s)	164, 498, 553, 575, 699, 785, 1174, 1243, 1349
AluI	AGCT	9 cut(s)	164, 498, 553, 575, 699, 785, 1174, 1243, 1349
Alw21I	GWGCWC	4 cut(s)	701, 824, 998, 1203
Alw26I	GTCTC	3 cut(s)	16, 126, 1699
Alw44I	GTGCAC	1 cut(s)	820
AlwI	GGATC	5 cut(s)	549, 756, 1181, 1525, 1841
AlwNI	CAGNNNCTG	1 cut(s)	364
Aor13HI	TCCGGA	1 cut(s)	883
Aor51HI	AGCGCT	1 cut(s)	744
AoxI	GGCC	6 cut(s)	35, 72, 186, 447, 488, 522
ApaLI	GTGCAC	1 cut(s)	820
ApeKI	GCWGC	6 cut(s)	222, 550, 553, 1171, 1253, 1358
ApoI	RAATTY	4 cut(s)	335, 1368, 1642, 1796
ArsI	GACNNNNNNTTYG	4 cut(s)	397, 429, 667, 699
Asp700I	GAANNNNTTC	1 cut(s)	1049
AspLEI	GCGC	4 cut(s)	239, 288, 745, 1319
AspS9I	GGNCC	4 cut(s)	186, 522, 881, 1381
AsuC2I	CCSGG	1 cut(s)	1500
AsuHPI	GGTGA	6 cut(s)	81, 103, 647, 685, 1531, 1853
AvaII	GGWCC	2 cut(s)	881, 1381
AxyI	CCTNAGG	1 cut(s)	1772
BaeGI	GKGCMC	1 cut(s)	824
BalI	TGGCCA	1 cut(s)	74
BanI	GGYRCC	1 cut(s)	285
BanII	GRGCYC	1 cut(s)	701
BbrPI	CACGTG	1 cut(s)	70
BbsI	GAAGAC	1 cut(s)	265
Bbv12I	GWGCWC	4 cut(s)	701, 824, 998, 1203
BbvI	GCAGC	6 cut(s)	209, 540, 562, 1183, 1265, 1345
BccI	CCATC	6 cut(s)	463, 646, 664, 961, 1434, 1868
BceAI	ACGGC	2 cut(s)	224, 840
BciT130I	CCWGG	3 cut(s)	227, 400, 1191
BcnI	CCSGG	1 cut(s)	1500
BcoDI	GTCTC	3 cut(s)	16, 126, 1699
BfaI	CTAG	1 cut(s)	1346
BfmI	CTRYAG	1 cut(s)	702
BfoI	RGCGCY	2 cut(s)	289, 746
BfuAI	ACCTGC	1 cut(s)	764
BglI	GCCNNNNNGGC	1 cut(s)	455
BglII	AGATCT	1 cut(s)	1657
BisI	GCNGC	6 cut(s)	223, 551, 554, 1172, 1254, 1359
BlsI	GCNGC	6 cut(s)	224, 552, 555, 1173, 1255, 1360
Bme1390I	CCNGG	4 cut(s)	227, 400, 1191, 1500
Bme18I	GGWCC	2 cut(s)	881, 1381
BmgBI	CACGTC	2 cut(s)	56, 271
BmgT120I	GGNCC	4 cut(s)	186, 522, 881, 1381
BmiI	GGNNCC	3 cut(s)	287, 1383, 1399
BmrFI	CCNGG	4 cut(s)	227, 400, 1191, 1500
BmrI	ACTGGG	2 cut(s)	687, 854
BmsI	GCATC	4 cut(s)	934, 1279, 1381, 1493
BmuI	ACTGGG	2 cut(s)	687, 854
BpiI	GAAGAC	1 cut(s)	265
BpuEI	CTTGAG	3 cut(s)	530, 661, 1682
BpuMI	CCSGG	1 cut(s)	1500
BsaAI	YACGTR	1 cut(s)	70
BsaHI	GRCGYC	1 cut(s)	286
BsaI	GGTCTC	1 cut(s)	126
BsaJI	CCNNGG	4 cut(s)	32, 156, 450, 1740
BsaWI	WCCGGW	1 cut(s)	883
Bsc4I	CCNNNNNNNGG	1 cut(s)	531
Bse1I	ACTGG	4 cut(s)	351, 682, 849, 1713
Bse21I	CCTNAGG	1 cut(s)	1772
Bse3DI	GCAATG	1 cut(s)	876
BseAI	TCCGGA	1 cut(s)	883
BseBI	CCWGG	3 cut(s)	227, 400, 1191
BseDI	CCNNGG	4 cut(s)	32, 156, 450, 1740
BseGI	GGATG	5 cut(s)	768, 972, 985, 1450, 1508
BseLI	CCNNNNNNNGG	1 cut(s)	531
BseMI	GCAATG	1 cut(s)	876
BseMII	CTCAG	3 cut(s)	1448, 1583, 1786
BseNI	ACTGG	4 cut(s)	351, 682, 849, 1713
BseSI	GKGCMC	1 cut(s)	824
BseXI	GCAGC	6 cut(s)	209, 540, 562, 1183, 1265, 1345
BseYI	CCCAGC	1 cut(s)	575
Bsh1236I	CGCG	3 cut(s)	177, 237, 650
BshFI	GGCC	6 cut(s)	37, 74, 188, 449, 490, 524
BshNI	GGYRCC	1 cut(s)	285
BsiHKAI	GWGCWC	4 cut(s)	701, 824, 998, 1203
BsiSI	CCGG	2 cut(s)	884, 1499
BslFI	GGGAC	1 cut(s)	1087
BslI	CCNNNNNNNGG	1 cut(s)	531
BsmAI	GTCTC	3 cut(s)	16, 126, 1699
BsmBI	CGTCTC	1 cut(s)	16
BsmFI	GGGAC	1 cut(s)	1087
BsnI	GGCC	6 cut(s)	37, 74, 188, 449, 490, 524
Bso31I	GGTCTC	1 cut(s)	126
Bsp1286I	GDGCHC	4 cut(s)	701, 824, 998, 1203
Bsp13I	TCCGGA	1 cut(s)	883
Bsp19I	CCATGG	2 cut(s)	32, 156
BspACI	CCGC	2 cut(s)	153, 177
BspANI	GGCC	6 cut(s)	37, 74, 188, 449, 490, 524
BspCNI	CTCAG	3 cut(s)	1447, 1584, 1785
BspEI	TCCGGA	1 cut(s)	883
BspFNI	CGCG	3 cut(s)	177, 237, 650
BspHI	TCATGA	2 cut(s)	736, 1792
BspLI	GGNNCC	3 cut(s)	287, 1383, 1399
BspMI	ACCTGC	1 cut(s)	764
BspPI	GGATC	5 cut(s)	549, 756, 1181, 1525, 1841
BspT107I	GGYRCC	1 cut(s)	285
BspTNI	GGTCTC	1 cut(s)	126
BsrDI	GCAATG	1 cut(s)	876
BsrI	ACTGG	4 cut(s)	351, 682, 849, 1713
BssECI	CCNNGG	4 cut(s)	32, 156, 450, 1740
BssNI	GRCGYC	1 cut(s)	286
BssT1I	CCWWGG	4 cut(s)	32, 156, 450, 1740
Bst2UI	CCWGG	3 cut(s)	227, 400, 1191
Bst4CI	ACNGT	8 cut(s)	79, 425, 443, 728, 734, 953, 1096, 1700
Bst6I	CTCTTC	5 cut(s)	514, 761, 783, 1189, 1460
BstACI	GRCGYC	1 cut(s)	286
BstBAI	YACGTR	1 cut(s)	70
BstC8I	GCNNGC	4 cut(s)	254, 526, 820, 1321
BstDEI	CTNAG	3 cut(s)	1434, 1592, 1772
BstDSI	CCRYGG	2 cut(s)	32, 156
BstF5I	GGATG	5 cut(s)	768, 972, 985, 1450, 1508
BstFNI	CGCG	3 cut(s)	177, 237, 650
BstH2I	RGCGCY	2 cut(s)	289, 746
BstHHI	GCGC	4 cut(s)	239, 288, 745, 1319
BstMAI	GTCTC	3 cut(s)	16, 126, 1699
BstMWI	GCNNNNNNNGC	9 cut(s)	80, 152, 161, 236, 455, 791, 824, 1013, 1355
BstNI	CCWGG	3 cut(s)	227, 400, 1191
BstNSI	RCATGY	5 cut(s)	328, 863, 1323, 1358, 1600
BstSCI	CCNGG	4 cut(s)	225, 398, 1189, 1498
BstSFI	CTRYAG	1 cut(s)	702
BstSLI	GKGCMC	1 cut(s)	824
BstUI	CGCG	3 cut(s)	177, 237, 650
BstV1I	GCAGC	6 cut(s)	209, 540, 562, 1183, 1265, 1345
BstV2I	GAAGAC	1 cut(s)	265
BstX2I	RGATCY	5 cut(s)	541, 748, 1530, 1657, 1846
BstYI	RGATCY	5 cut(s)	541, 748, 1530, 1657, 1846
Bsu36I	CCTNAGG	1 cut(s)	1772
BsuRI	GGCC	6 cut(s)	37, 74, 188, 449, 490, 524
BtgI	CCRYGG	2 cut(s)	32, 156
BtgZI	GCGATG	1 cut(s)	665
BtrI	CACGTC	2 cut(s)	56, 271
BtsCI	GGATG	5 cut(s)	768, 972, 985, 1450, 1508
BtsI	GCAGTG	1 cut(s)	1299
BtsIMutI	CAGTG	5 cut(s)	733, 958, 1040, 1299, 1705
BveI	ACCTGC	1 cut(s)	764
Cac8I	GCNNGC	4 cut(s)	254, 526, 820, 1321
CaiI	CAGNNNCTG	1 cut(s)	364
CciI	TCATGA	2 cut(s)	736, 1792
CfoI	GCGC	4 cut(s)	239, 288, 745, 1319
Cfr13I	GGNCC	4 cut(s)	186, 522, 881, 1381
CseI	GACGC	2 cut(s)	183, 368
Csp6I	GTAC	3 cut(s)	622, 857, 1150
CviQI	GTAC	3 cut(s)	622, 857, 1150
DdeI	CTNAG	3 cut(s)	1434, 1592, 1772
DinI	GGCGCC	1 cut(s)	287
DrdI	GACNNNNNNGTC	1 cut(s)	197
DseDI	GACNNNNNNGTC	1 cut(s)	197
EaeI	YGGCCR	2 cut(s)	72, 488
Eam1104I	CTCTTC	5 cut(s)	514, 761, 783, 1189, 1460
EarI	CTCTTC	5 cut(s)	514, 761, 783, 1189, 1460
Ecl136II	GAGCTC	1 cut(s)	699
Eco130I	CCWWGG	4 cut(s)	32, 156, 450, 1740
Eco147I	AGGCCT	1 cut(s)	449
Eco24I	GRGCYC	1 cut(s)	701
Eco31I	GGTCTC	1 cut(s)	126
Eco47I	GGWCC	2 cut(s)	881, 1381
Eco47III	AGCGCT	1 cut(s)	744
Eco53kI	GAGCTC	1 cut(s)	699
Eco57I	CTGAAG	2 cut(s)	807, 1064
Eco72I	CACGTG	1 cut(s)	70
Eco81I	CCTNAGG	1 cut(s)	1772
EcoICRI	GAGCTC	1 cut(s)	699
EcoO109I	RGGNCCY	1 cut(s)	522
EcoRII	CCWGG	3 cut(s)	225, 398, 1189
EcoT14I	CCWWGG	4 cut(s)	32, 156, 450, 1740
EcoT38I	GRGCYC	1 cut(s)	701
EgeI	GGCGCC	1 cut(s)	287
EheI	GGCGCC	1 cut(s)	287
ErhI	CCWWGG	4 cut(s)	32, 156, 450, 1740
Esp3I	CGTCTC	1 cut(s)	16
FalI	AAGNNNNNCTT	4 cut(s)	257, 289, 1666, 1698
FaqI	GGGAC	1 cut(s)	1087
FblI	GTMKAC	1 cut(s)	201
Fnu4HI	GCNGC	6 cut(s)	223, 551, 554, 1172, 1254, 1359
FokI	GGATG	5 cut(s)	775, 979, 992, 1457, 1515
FriOI	GRGCYC	1 cut(s)	701
Fsp4HI	GCNGC	6 cut(s)	223, 551, 554, 1172, 1254, 1359
FspBI	CTAG	1 cut(s)	1346
GlaI	GCGC	4 cut(s)	238, 287, 744, 1318
GluI	GCNGC	6 cut(s)	223, 551, 554, 1172, 1254, 1359
GsaI	CCCAGC	1 cut(s)	579
HaeII	RGCGCY	2 cut(s)	289, 746
HaeIII	GGCC	6 cut(s)	37, 74, 188, 449, 490, 524
HapII	CCGG	2 cut(s)	884, 1499
HgaI	GACGC	2 cut(s)	183, 368
HhaI	GCGC	4 cut(s)	239, 288, 745, 1319
Hin1I	GRCGYC	1 cut(s)	286
Hin6I	GCGC	4 cut(s)	237, 286, 743, 1317
HinP1I	GCGC	4 cut(s)	237, 286, 743, 1317
HincII	GTYRAC	1 cut(s)	801
HindII	GTYRAC	1 cut(s)	801
HindIII	AAGCTT	1 cut(s)	1241
HpaII	CCGG	2 cut(s)	884, 1499
HphI	GGTGA	6 cut(s)	81, 103, 647, 685, 1531, 1853
Hpy166II	GTNNAC	7 cut(s)	202, 262, 622, 801, 822, 1283, 1522
Hpy188I	TCNGA	6 cut(s)	99, 208, 384, 589, 603, 1437
Hpy8I	GTNNAC	7 cut(s)	202, 262, 622, 801, 822, 1283, 1522
Hpy99I	CGWCG	4 cut(s)	83, 200, 237, 799
HpyAV	CCTTC	5 cut(s)	69, 310, 970, 1057, 1224
HpyCH4III	ACNGT	8 cut(s)	79, 425, 443, 728, 734, 953, 1096, 1700
HpyCH4IV	ACGT	4 cut(s)	55, 69, 270, 797
HpyF10VI	GCNNNNNNNGC	9 cut(s)	80, 152, 161, 236, 455, 791, 824, 1013, 1355
HpyF3I	CTNAG	3 cut(s)	1434, 1592, 1772
HpySE526I	ACGT	4 cut(s)	55, 69, 270, 797
Hsp92I	GRCGYC	1 cut(s)	286
HspAI	GCGC	4 cut(s)	237, 286, 743, 1317
KasI	GGCGCC	1 cut(s)	285
Kpn2I	TCCGGA	1 cut(s)	883
LmnI	GCTCC	3 cut(s)	696, 782, 993
Lsp1109I	GCAGC	6 cut(s)	209, 540, 562, 1183, 1265, 1345
LweI	GCATC	4 cut(s)	934, 1279, 1381, 1493
MaeI	CTAG	1 cut(s)	1346
MaeII	ACGT	4 cut(s)	55, 69, 270, 797
MaeIII	GTNAC	4 cut(s)	635, 673, 728, 1294
MboII	GAAGA	9 cut(s)	265, 362, 501, 778, 800, 953, 1206, 1214, 1477
MflI	RGATCY	5 cut(s)	541, 748, 1530, 1657, 1846
MhlI	GDGCHC	4 cut(s)	701, 824, 998, 1203
MlsI	TGGCCA	1 cut(s)	74
MluCI	AATT	6 cut(s)	335, 629, 1368, 1485, 1642, 1796
MluNI	TGGCCA	1 cut(s)	74
Mly113I	GGCGCC	1 cut(s)	286
MlyI	GAGTC	5 cut(s)	88, 185, 593, 1550, 1605
MmeI	TCCRAC	2 cut(s)	561, 1490
Mox20I	TGGCCA	1 cut(s)	74
MroI	TCCGGA	1 cut(s)	883
MroXI	GAANNNNTTC	1 cut(s)	1049
MscI	TGGCCA	1 cut(s)	74
MseI	TTAA	4 cut(s)	305, 333, 570, 812
MslI	CAYNNNNRTG	3 cut(s)	323, 864, 1335
Msp20I	TGGCCA	1 cut(s)	74
MspA1I	CMGCKG	1 cut(s)	553
MspI	CCGG	2 cut(s)	884, 1499
MspR9I	CCNGG	4 cut(s)	227, 400, 1191, 1500
MvaI	CCWGG	3 cut(s)	227, 400, 1191
MvnI	CGCG	3 cut(s)	177, 237, 650
MwoI	GCNNNNNNNGC	9 cut(s)	80, 152, 161, 236, 455, 791, 824, 1013, 1355
NarI	GGCGCC	1 cut(s)	286
NciI	CCSGG	1 cut(s)	1500
NcoI	CCATGG	2 cut(s)	32, 156
NlaIV	GGNNCC	3 cut(s)	287, 1383, 1399
NmuCI	GTSAC	4 cut(s)	635, 673, 728, 1294
NspI	RCATGY	5 cut(s)	328, 863, 1323, 1358, 1600
PaeI	GCATGC	1 cut(s)	1323
PagI	TCATGA	2 cut(s)	736, 1792
PceI	AGGCCT	1 cut(s)	449
PciI	ACATGT	2 cut(s)	324, 859
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PdmI	GAANNNNTTC	1 cut(s)	1049
PfeI	GAWTC	5 cut(s)	86, 180, 683, 892, 1264
PflFI	GACNNNGTC	1 cut(s)	194
PfoI	TCCNGGA	2 cut(s)	398, 1189
PkrI	GCNGC	6 cut(s)	224, 552, 555, 1173, 1255, 1360
PleI	GAGTC	5 cut(s)	88, 185, 592, 1550, 1605
PluTI	GGCGCC	1 cut(s)	289
PmaCI	CACGTG	1 cut(s)	70
PmlI	CACGTG	1 cut(s)	70
PpsI	GAGTC	5 cut(s)	88, 185, 592, 1550, 1605
Ppu21I	YACGTR	1 cut(s)	70
PscI	ACATGT	2 cut(s)	324, 859
Psp124BI	GAGCTC	1 cut(s)	701
Psp6I	CCWGG	3 cut(s)	225, 398, 1189
PspCI	CACGTG	1 cut(s)	70
PspFI	CCCAGC	1 cut(s)	575
PspGI	CCWGG	3 cut(s)	225, 398, 1189
PspN4I	GGNNCC	3 cut(s)	287, 1383, 1399
PspPI	GGNCC	4 cut(s)	186, 522, 881, 1381
PstNI	CAGNNNCTG	1 cut(s)	364
PsuI	RGATCY	5 cut(s)	541, 748, 1530, 1657, 1846
PsyI	GACNNNGTC	1 cut(s)	194
PvuII	CAGCTG	1 cut(s)	553
RsaI	GTAC	3 cut(s)	623, 858, 1151
RsaNI	GTAC	3 cut(s)	622, 857, 1150
RseI	CAYNNNNRTG	3 cut(s)	323, 864, 1335
SacI	GAGCTC	1 cut(s)	701
SaqAI	TTAA	4 cut(s)	305, 333, 570, 812
SatI	GCNGC	6 cut(s)	223, 551, 554, 1172, 1254, 1359
Sau96I	GGNCC	4 cut(s)	186, 522, 881, 1381
SchI	GAGTC	5 cut(s)	88, 185, 593, 1550, 1605
ScrFI	CCNGG	4 cut(s)	227, 400, 1191, 1500
SduI	GDGCHC	4 cut(s)	701, 824, 998, 1203
SfaNI	GCATC	4 cut(s)	934, 1279, 1381, 1493
SfcI	CTRYAG	1 cut(s)	702
SfoI	GGCGCC	1 cut(s)	287
SinI	GGWCC	2 cut(s)	881, 1381
SmiMI	CAYNNNNRTG	3 cut(s)	323, 864, 1335
SmlI	CTYRAG	3 cut(s)	545, 640, 1661
SmoI	CTYRAG	3 cut(s)	545, 640, 1661
SphI	GCATGC	1 cut(s)	1323
Sse9I	AATT	6 cut(s)	335, 629, 1368, 1485, 1642, 1796
SseBI	AGGCCT	1 cut(s)	449
SsiI	CCGC	2 cut(s)	153, 177
SspDI	GGCGCC	1 cut(s)	285
SspMI	CTAG	1 cut(s)	1346
SstI	GAGCTC	1 cut(s)	701
StuI	AGGCCT	1 cut(s)	449
StyD4I	CCNGG	4 cut(s)	225, 398, 1189, 1498
StyI	CCWWGG	4 cut(s)	32, 156, 450, 1740
TaaI	ACNGT	8 cut(s)	79, 425, 443, 728, 734, 953, 1096, 1700
TaiI	ACGT	4 cut(s)	58, 72, 273, 800
TaqI	TCGA	5 cut(s)	102, 369, 626, 663, 1053
TasI	AATT	6 cut(s)	335, 629, 1368, 1485, 1642, 1796
TatI	WGTACW	2 cut(s)	621, 856
TfiI	GAWTC	5 cut(s)	86, 180, 683, 892, 1264
Tru1I	TTAA	4 cut(s)	305, 333, 570, 812
Tru9I	TTAA	4 cut(s)	305, 333, 570, 812
TscAI	CASTG	5 cut(s)	733, 958, 1047, 1299, 1705
TseFI	GTSAC	4 cut(s)	635, 673, 728, 1294
TseI	GCWGC	6 cut(s)	222, 550, 553, 1171, 1253, 1358
Tsp45I	GTSAC	4 cut(s)	635, 673, 728, 1294
TspGWI	ACGGA	1 cut(s)	184
TspRI	CASTG	5 cut(s)	733, 958, 1047, 1299, 1705
Tth111I	GACNNNGTC	1 cut(s)	194
VneI	GTGCAC	1 cut(s)	820
VpaK11BI	GGWCC	2 cut(s)	881, 1381
XapI	RAATTY	4 cut(s)	335, 1368, 1642, 1796
XceI	RCATGY	5 cut(s)	328, 863, 1323, 1358, 1600
XcmI	CCANNNNNNNNNTGG	2 cut(s)	154, 1871
XmiI	GTMKAC	1 cut(s)	201
XmnI	GAANNNNTTC	1 cut(s)	1049
XspI	CTAG	1 cut(s)	1346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.