Prupe.8G181700_v2.0.a1

Pentatricopeptide repeat-containing protein At2g03880

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18163577 .. 18166102
2526 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G181700.1

Sequence Viewer

Length: 1932 bp
ATGTTCTTCTCAAAAATGAGAGCCATTCCCATCTCCAAGTTGAAATGCAAAGCATGGCCCTCATTTTTACTGTCACGTTCTTGCTCTCACATGGCTAACGTGGCAGAACCACCGCCGTCCACTCTGGTTGATGAGTTCACAAAGTTTTGCTACCAGAGAGACTTACCCAGAGCAATGACAGCTATGGAAGCCATGCAAAGGCGTGGAATTTGGGCCGACTCACTCGTCTACTCGGAGCTCGTCAAGTGCTGCTTGGCTCGTCGAGCTGTTCAACAGGGCAAGCTTGTCCACAAGCACGTTTTCTCAAATGGGTACCGGCCCAAGACCTTTTTAACTAACATATTCATCAACATGTACGTGAAATTTGGTCTCCTGGAGGAAGCACAGTCATTGTTCGACGAAATGCCTGAGAGAAACGTTGTTTCCTGGACGACGATGATATCGGCTTACTCTAATGCCAAGCTAAACCACAAGGCCTTGGAGTCTTTGGTTTTGATGCTTAGAGAAGATGTGATGCCTAATAGCTTCACCTACTCATCGGTTTTGAGAGCTTGCGATGGGTTATGGTATCTCAAGCAGCTTCATTGTAGTATTATTAGAGTAGGGTTAGAATCTGACGTTTTTGTTCGGAGTGCTCTCATTGACGTTTACTCGAAATTGGGTGAGTTGCATAATGCACTAGGCGTTTTCAATGAGATGGTGACTGGAGATTTGGTTGTTTGGAACTCTATCATTGGAGCTTTTGCTCAGAACAGCGATGGTGATGAGGCTCTGAACCTTTTCAAGAGGATGAAGGGGGCTGGTTTTGCAGCTGAAGAGGCCACATTAACGAGTGTTCTGAGAGCTTGCACGGTGTTAGCGCTTTTAGAATTGGGCAGACAAGTTCATGTTCATGCAGTAAAGTATGGTCAAGATCTAATTCTGAACAATGCCCTTCTTGATATGTATTGTAAATGTGGGAGCTTGGAAGATGCAAACTCTGTTTTTACCAGGATGGTGGAGAAGGATGTGATCTCTTGGAGCACCATGATTGCAGGGTTAGCACAAAATGGTTTCAGCCAAGAGGCATTGAGATTGTTTGAGCAGATGAAAATTTCGGGGACGAAGCCAAACTACATCACAATTCTTGGGGTTCTATTTGCTTGTAGTCATGCTGGCCTTTTAGAAGATGGGTGGTACTACTTCCAGAATATGAAGCAGCTTTTCGGTATTGATCCAGGAAGAGAGCACTATGGTTGTGTAATTGATCTTCTTGGAAGGGCTGGGAAGGTAGATGAGGCAGCAAGGTTAATTCAAGAAATGGAATGTGAACCAGATGCAGTGACATGGAGGACTTTGCTCGGTGCATGCAGGGTTCACCGCAACGTGGATTTAGCTGCATATGCTGCCAAGCAAGTTCTTAAAATGGACCCTGATGATGCCGGAACCTACATACTATTGTCCAACATATATGCCAATTCTCAAAGATGGGAAGATGTTGCAGAAGTTAGGAAGAGCATGAGAGCTAGAGGAGTTACTAAAGAACCAGGGTGCAGTTGGATTGAAGTGGACAAACAGATTCATGCTTTTATTATGGGAGATGACTCACATCCACAAATAGATGAGATCAATAGACAGCTGAGCCTGTTGGTTGATAGACTAATGGGAATGGGATACGTTCCAGACACGAATTTTGTTTTGCAAGATCTTGAGGGAGAACAGAGGGAAGTTTCGCTTCTATCCCACAGCGAGAAATTGGCAATTGTTTTTGGTATAATGAGCTTGTCAAAGGGGAGGACTGTTAGGATAAGGAAAAACCTGAGGATCTGTGGAGACTGTCATATATTTGCAAAACTTGTAGCAAAGATGGAGGAGAGAGTTATTGTGATAAGAGATCCCATCCGGTACCATCATTTTCAAGATGGGGTATGCTCTTGTGGGGATTATTGGTAG

Protein Analysis

644

Amino Acids

72.63

Weight (kDa)

6.79

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0016566)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G03880
fragaria_vesca FvH4_2g16980
malus_domestica MD05G1142000.v1.1 MD05G1142900.v1.1
prunus_persica Prupe.8G181700_v2.0.a1
pyrus_communis pycom05g13740
rosa_chinensis RchiOBHm_Chr6g0281171
rosa_laevigata RLG00000012988
rosa_multiflora Rmu_sc0001705.1_g000021 Rmu_sc0035650.1_g000002
rosa_roxburghii Rroxscaffold_7G00187240
rosa_rugosa Rorug06G0139500
rosa_samantha Rh6DG245900
rosa_wichuraiana Rw6G021820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
Acc65I GGTACC 2 cut(s) 312, 1884
AccB1I GGYRCC 2 cut(s) 312, 1884
AccI GTMKAC 1 cut(s) 228
AciI CCGC 2 cut(s) 113, 1360
AclI AACGTT 1 cut(s) 417
AclWI GGATC 3 cut(s) 1208, 1811, 1868
AcsI RAATTY 4 cut(s) 207, 362, 1092, 1669
AcuI CTGAAG 1 cut(s) 834
AfaI GTAC 4 cut(s) 314, 356, 1178, 1886
AfeI AGCGCT 1 cut(s) 861
AfiI CCNNNNNNNGG 2 cut(s) 198, 1366
AflIII ACRYGT 1 cut(s) 351
AgsI TTSAA 7 cut(s) 43, 272, 691, 784, 1295, 1544, 1898
AjnI CCWGG 5 cut(s) 372, 425, 989, 1216, 1525
Alw21I GWGCWC 4 cut(s) 240, 637, 1025, 1230
Alw26I GTCTC 3 cut(s) 153, 374, 1806
AlwI GGATC 3 cut(s) 1208, 1811, 1868
Aor51HI AGCGCT 1 cut(s) 861
AoxI GGCC 6 cut(s) 56, 213, 317, 474, 819, 1156
ApeKI GCWGC 7 cut(s) 249, 577, 809, 1198, 1280, 1376, 1385
ApoI RAATTY 4 cut(s) 207, 362, 1092, 1669
ArsI GACNNNNNNTTYG 4 cut(s) 694, 726, 1655, 1687
Asp700I GAANNNNTTC 1 cut(s) 779
Asp718I GGTACC 2 cut(s) 312, 1884
AspLEI GCGC 1 cut(s) 862
AspS9I GGNCC 4 cut(s) 57, 213, 318, 1408
AsuHPI GGTGA 5 cut(s) 520, 674, 712, 773, 1349
AvaII GGWCC 1 cut(s) 1408
AxyI CCTNAGG 1 cut(s) 1799
BanI GGYRCC 2 cut(s) 312, 1884
BanII GRGCYC 1 cut(s) 240
BarI GAAGNNNNNNTAC 4 cut(s) 1097, 1129, 1233, 1265
Bbv12I GWGCWC 4 cut(s) 240, 637, 1025, 1230
BbvI GCAGC 7 cut(s) 236, 589, 821, 1210, 1292, 1363, 1372
BceAI ACGGC 1 cut(s) 100
BciT130I CCWGG 5 cut(s) 374, 427, 991, 1218, 1527
BciVI GTATCC 1 cut(s) 1646
BcoDI GTCTC 3 cut(s) 153, 374, 1806
BfaI CTAG 2 cut(s) 680, 1506
BfoI RGCGCY 1 cut(s) 863
BfuI GTATCC 1 cut(s) 1646
BglII AGATCT 2 cut(s) 913, 1684
BisI GCNGC 7 cut(s) 250, 578, 810, 1199, 1281, 1377, 1386
BlpI GCTNAGC 1 cut(s) 1619
BlsI GCNGC 7 cut(s) 251, 579, 811, 1200, 1282, 1378, 1387
Bme1390I CCNGG 5 cut(s) 374, 427, 991, 1218, 1527
Bme18I GGWCC 1 cut(s) 1408
BmgT120I GGNCC 4 cut(s) 57, 213, 318, 1408
BmiI GGNNCC 4 cut(s) 314, 1410, 1426, 1886
BmrFI CCNGG 5 cut(s) 374, 427, 991, 1218, 1527
BmsI GCATC 5 cut(s) 486, 504, 961, 1306, 1408
BpmI CTGGAG 2 cut(s) 395, 726
Bpu1102I GCTNAGC 1 cut(s) 1619
BpuEI CTTGAG 2 cut(s) 557, 1709
BsaAI YACGTR 1 cut(s) 358
BsaI GGTCTC 1 cut(s) 374
BsaJI CCNNGG 2 cut(s) 477, 1526
BsaWI WCCGGW 1 cut(s) 1881
BsaXI ACNNNNNCTCC 2 cut(s) 699, 729
Bsc4I CCNNNNNNNGG 2 cut(s) 198, 1366
Bse118I RCCGGY 1 cut(s) 315
Bse1I ACTGG 1 cut(s) 709
Bse21I CCTNAGG 1 cut(s) 1799
Bse3DI GCAATG 1 cut(s) 180
BseBI CCWGG 5 cut(s) 374, 427, 991, 1218, 1527
BseDI CCNNGG 2 cut(s) 477, 1526
BseGI GGATG 5 cut(s) 795, 999, 1012, 1588, 1878
BseLI CCNNNNNNNGG 2 cut(s) 198, 1366
BseMI GCAATG 1 cut(s) 180
BseMII CTCAG 5 cut(s) 399, 761, 830, 1610, 1790
BseNI ACTGG 1 cut(s) 709
BseRI GAGGAG 2 cut(s) 1524, 1865
BseXI GCAGC 7 cut(s) 236, 589, 821, 1210, 1292, 1363, 1372
BseYI CCCAGC 1 cut(s) 1262
BsgI GTGCAG 1 cut(s) 1552
BshFI GGCC 6 cut(s) 58, 215, 319, 476, 821, 1158
BshNI GGYRCC 2 cut(s) 312, 1884
BsiHKAI GWGCWC 4 cut(s) 240, 637, 1025, 1230
BsiSI CCGG 3 cut(s) 316, 1422, 1882
BslFI GGGAC 1 cut(s) 1114
BslI CCNNNNNNNGG 2 cut(s) 198, 1366
BsmAI GTCTC 3 cut(s) 153, 374, 1806
BsmFI GGGAC 1 cut(s) 1114
BsnI GGCC 6 cut(s) 58, 215, 319, 476, 821, 1158
Bso31I GGTCTC 1 cut(s) 374
Bsp1286I GDGCHC 4 cut(s) 240, 637, 1025, 1230
Bsp143I GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
Bsp1720I GCTNAGC 1 cut(s) 1619
BspACI CCGC 2 cut(s) 113, 1360
BspANI GGCC 6 cut(s) 58, 215, 319, 476, 821, 1158
BspCNI CTCAG 5 cut(s) 400, 760, 831, 1611, 1791
BspLI GGNNCC 4 cut(s) 314, 1410, 1426, 1886
BspPI GGATC 3 cut(s) 1208, 1811, 1868
BspQI GCTCTTC 1 cut(s) 1487
BspT107I GGYRCC 2 cut(s) 312, 1884
BspTNI GGTCTC 1 cut(s) 374
BsrDI GCAATG 1 cut(s) 180
BsrFI RCCGGY 1 cut(s) 315
BsrI ACTGG 1 cut(s) 709
BssAI RCCGGY 1 cut(s) 315
BssECI CCNNGG 2 cut(s) 477, 1526
BssMI GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
BssT1I CCWWGG 1 cut(s) 477
Bst2UI CCWGG 5 cut(s) 374, 427, 991, 1218, 1527
Bst4CI ACNGT 5 cut(s) 72, 387, 853, 1780, 1817
Bst6I CTCTTC 3 cut(s) 810, 1216, 1487
BstAPI GCANNNNNTGC 1 cut(s) 1385
BstBAI YACGTR 1 cut(s) 358
BstC8I GCNNGC 5 cut(s) 281, 553, 847, 1156, 1348
BstDEI CTNAG 6 cut(s) 408, 500, 747, 839, 1619, 1799
BstF5I GGATG 5 cut(s) 795, 999, 1012, 1588, 1878
BstH2I RGCGCY 1 cut(s) 863
BstHHI GCGC 1 cut(s) 862
BstKTI GATC 8 cut(s) 916, 1014, 1216, 1249, 1608, 1687, 1806, 1876
BstMAI GTCTC 3 cut(s) 153, 374, 1806
BstMBI GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
BstMWI GCNNNNNNNGC 9 cut(s) 101, 179, 188, 263, 806, 818, 1040, 1382, 1385
BstNI CCWGG 5 cut(s) 374, 427, 991, 1218, 1527
BstNSI RCATGY 2 cut(s) 355, 1350
BstSCI CCNGG 5 cut(s) 372, 425, 989, 1216, 1525
BstV1I GCAGC 7 cut(s) 236, 589, 821, 1210, 1292, 1363, 1372
BstX2I RGATCY 4 cut(s) 913, 1684, 1803, 1873
BstXI CCANNNNNNTGG 1 cut(s) 997
BstYI RGATCY 4 cut(s) 913, 1684, 1803, 1873
Bsu36I CCTNAGG 1 cut(s) 1799
BsuI GTATCC 1 cut(s) 1646
BsuRI GGCC 6 cut(s) 58, 215, 319, 476, 821, 1158
BtgZI GCGATG 2 cut(s) 570, 771
BtsCI GGATG 5 cut(s) 795, 999, 1012, 1588, 1878
BtsI GCAGTG 1 cut(s) 1326
BtsIMutI CAGTG 1 cut(s) 1326
Cac8I GCNNGC 5 cut(s) 281, 553, 847, 1156, 1348
CfoI GCGC 1 cut(s) 862
Cfr10I RCCGGY 1 cut(s) 315
Cfr13I GGNCC 4 cut(s) 57, 213, 318, 1408
Csp6I GTAC 4 cut(s) 313, 355, 1177, 1885
CspCI CAANNNNNGTGG 2 cut(s) 109, 144
CviQI GTAC 4 cut(s) 313, 355, 1177, 1885
DdeI CTNAG 6 cut(s) 408, 500, 747, 839, 1619, 1799
DpnI GATC 8 cut(s) 915, 1013, 1215, 1248, 1607, 1686, 1805, 1875
DpnII GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
DrdI GACNNNNNNGTC 1 cut(s) 224
DseDI GACNNNNNNGTC 1 cut(s) 224
Eam1104I CTCTTC 3 cut(s) 810, 1216, 1487
EarI CTCTTC 3 cut(s) 810, 1216, 1487
Ecl136II GAGCTC 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 477
Eco147I AGGCCT 1 cut(s) 476
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 374
Eco32I GATATC 1 cut(s) 441
Eco47I GGWCC 1 cut(s) 1408
Eco47III AGCGCT 1 cut(s) 861
Eco53kI GAGCTC 1 cut(s) 238
Eco57I CTGAAG 1 cut(s) 834
Eco81I CCTNAGG 1 cut(s) 1799
EcoICRI GAGCTC 1 cut(s) 238
EcoRII CCWGG 5 cut(s) 372, 425, 989, 1216, 1525
EcoRV GATATC 1 cut(s) 441
EcoT14I CCWWGG 1 cut(s) 477
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 1 cut(s) 477
FalI AAGNNNNNCTT 4 cut(s) 236, 268, 1698, 1730
FaqI GGGAC 1 cut(s) 1114
FauNDI CATATG 1 cut(s) 1381
FblI GTMKAC 1 cut(s) 228
Fnu4HI GCNGC 7 cut(s) 250, 578, 810, 1199, 1281, 1377, 1386
FokI GGATG 5 cut(s) 802, 1006, 1019, 1575, 1865
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 7 cut(s) 250, 578, 810, 1199, 1281, 1377, 1386
FspBI CTAG 2 cut(s) 680, 1506
GlaI GCGC 1 cut(s) 861
GluI GCNGC 7 cut(s) 250, 578, 810, 1199, 1281, 1377, 1386
GsaI CCCAGC 1 cut(s) 1266
GsuI CTGGAG 2 cut(s) 395, 726
HaeII RGCGCY 1 cut(s) 863
HaeIII GGCC 6 cut(s) 58, 215, 319, 476, 821, 1158
HapII CCGG 3 cut(s) 316, 1422, 1882
HhaI GCGC 1 cut(s) 862
Hin6I GCGC 1 cut(s) 860
HinP1I GCGC 1 cut(s) 860
HindIII AAGCTT 1 cut(s) 281
HinfI GANTC 5 cut(s) 218, 482, 611, 1558, 1583
HpaII CCGG 3 cut(s) 316, 1422, 1882
HphI GGTGA 5 cut(s) 520, 674, 712, 773, 1349
Hpy166II GTNNAC 8 cut(s) 120, 138, 229, 289, 649, 1310, 1357, 1549
Hpy188I TCNGA 7 cut(s) 235, 616, 630, 750, 774, 840, 924
Hpy188III TCNNGA 8 cut(s) 784, 911, 938, 1186, 1295, 1661, 1688, 1898
Hpy8I GTNNAC 8 cut(s) 120, 138, 229, 289, 649, 1310, 1357, 1549
Hpy99I CGWCG 3 cut(s) 264, 401, 436
HpyAV CCTTC 5 cut(s) 787, 944, 997, 1251, 1261
HpyCH4III ACNGT 5 cut(s) 72, 387, 853, 1780, 1817
HpyCH4IV ACGT 9 cut(s) 76, 99, 297, 357, 417, 618, 645, 1365, 1656
HpyF10VI GCNNNNNNNGC 9 cut(s) 101, 179, 188, 263, 806, 818, 1040, 1382, 1385
HpyF3I CTNAG 6 cut(s) 408, 500, 747, 839, 1619, 1799
HpySE526I ACGT 9 cut(s) 76, 99, 297, 357, 417, 618, 645, 1365, 1656
HspAI GCGC 1 cut(s) 860
KpnI GGTACC 2 cut(s) 316, 1888
Kzo9I GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
LguI GCTCTTC 1 cut(s) 1487
LmnI GCTCC 4 cut(s) 235, 737, 960, 1020
Lsp1109I GCAGC 7 cut(s) 236, 589, 821, 1210, 1292, 1363, 1372
LweI GCATC 5 cut(s) 486, 504, 961, 1306, 1408
MaeI CTAG 2 cut(s) 680, 1506
MaeII ACGT 9 cut(s) 76, 99, 297, 357, 417, 618, 645, 1365, 1656
MaeIII GTNAC 4 cut(s) 72, 700, 1321, 1513
MalI GATC 8 cut(s) 915, 1013, 1215, 1248, 1607, 1686, 1805, 1875
MboI GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
MboII GAAGA 8 cut(s) 518, 827, 980, 1178, 1233, 1241, 1484, 1504
MfeI CAATTG 1 cut(s) 1740
MflI RGATCY 4 cut(s) 913, 1684, 1803, 1873
MhlI GDGCHC 4 cut(s) 240, 637, 1025, 1230
MlyI GAGTC 3 cut(s) 212, 491, 1577
MmeI TCCRAC 2 cut(s) 1467, 1517
MroXI GAANNNNTTC 1 cut(s) 779
MseI TTAA 4 cut(s) 332, 827, 1289, 1401
MslI CAYNNNNRTG 3 cut(s) 350, 356, 891
MspA1I CMGCKG 2 cut(s) 812, 1618
MspI CCGG 3 cut(s) 316, 1422, 1882
MspR9I CCNGG 5 cut(s) 374, 427, 991, 1218, 1527
MunI CAATTG 1 cut(s) 1740
MvaI CCWGG 5 cut(s) 374, 427, 991, 1218, 1527
MwoI GCNNNNNNNGC 9 cut(s) 101, 179, 188, 263, 806, 818, 1040, 1382, 1385
NdeI CATATG 1 cut(s) 1381
NdeII GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
NlaIV GGNNCC 4 cut(s) 314, 1410, 1426, 1886
NmuCI GTSAC 3 cut(s) 72, 700, 1321
NspI RCATGY 2 cut(s) 355, 1350
PaeI GCATGC 1 cut(s) 1350
PceI AGGCCT 1 cut(s) 476
PciI ACATGT 1 cut(s) 351
PciSI GCTCTTC 1 cut(s) 1487
PdmI GAANNNNTTC 1 cut(s) 779
PfeI GAWTC 2 cut(s) 611, 1558
PfoI TCCNGGA 3 cut(s) 372, 425, 1216
PkrI GCNGC 7 cut(s) 251, 579, 811, 1200, 1282, 1378, 1387
PleI GAGTC 3 cut(s) 212, 490, 1577
PpsI GAGTC 3 cut(s) 212, 490, 1577
Ppu21I YACGTR 1 cut(s) 358
PscI ACATGT 1 cut(s) 351
Psp124BI GAGCTC 1 cut(s) 240
Psp1406I AACGTT 1 cut(s) 417
Psp6I CCWGG 5 cut(s) 372, 425, 989, 1216, 1525
PspFI CCCAGC 1 cut(s) 1262
PspGI CCWGG 5 cut(s) 372, 425, 989, 1216, 1525
PspN4I GGNNCC 4 cut(s) 314, 1410, 1426, 1886
PspPI GGNCC 4 cut(s) 57, 213, 318, 1408
PsuI RGATCY 4 cut(s) 913, 1684, 1803, 1873
PvuII CAGCTG 2 cut(s) 812, 1618
RsaI GTAC 4 cut(s) 314, 356, 1178, 1886
RsaNI GTAC 4 cut(s) 313, 355, 1177, 1885
RseI CAYNNNNRTG 3 cut(s) 350, 356, 891
SacI GAGCTC 1 cut(s) 240
SapI GCTCTTC 1 cut(s) 1487
SaqAI TTAA 4 cut(s) 332, 827, 1289, 1401
SatI GCNGC 7 cut(s) 250, 578, 810, 1199, 1281, 1377, 1386
Sau3AI GATC 8 cut(s) 913, 1011, 1213, 1246, 1605, 1684, 1803, 1873
Sau96I GGNCC 4 cut(s) 57, 213, 318, 1408
SchI GAGTC 3 cut(s) 212, 491, 1577
ScrFI CCNGG 5 cut(s) 374, 427, 991, 1218, 1527
SduI GDGCHC 4 cut(s) 240, 637, 1025, 1230
SfaNI GCATC 5 cut(s) 486, 504, 961, 1306, 1408
SinI GGWCC 1 cut(s) 1408
SmiMI CAYNNNNRTG 3 cut(s) 350, 356, 891
SmlI CTYRAG 2 cut(s) 572, 1688
SmoI CTYRAG 2 cut(s) 572, 1688
SphI GCATGC 1 cut(s) 1350
SseBI AGGCCT 1 cut(s) 476
SsiI CCGC 2 cut(s) 113, 1360
SspMI CTAG 2 cut(s) 680, 1506
SstI GAGCTC 1 cut(s) 240
StuI AGGCCT 1 cut(s) 476
StyD4I CCNGG 5 cut(s) 372, 425, 989, 1216, 1525
StyI CCWWGG 1 cut(s) 477
TaaI ACNGT 5 cut(s) 72, 387, 853, 1780, 1817
TaiI ACGT 9 cut(s) 79, 102, 300, 360, 420, 621, 648, 1368, 1659
TaqI TCGA 3 cut(s) 262, 396, 653
TfiI GAWTC 2 cut(s) 611, 1558
Tru1I TTAA 4 cut(s) 332, 827, 1289, 1401
Tru9I TTAA 4 cut(s) 332, 827, 1289, 1401
TscAI CASTG 1 cut(s) 1326
TseFI GTSAC 3 cut(s) 72, 700, 1321
TseI GCWGC 7 cut(s) 249, 577, 809, 1198, 1280, 1376, 1385
Tsp45I GTSAC 3 cut(s) 72, 700, 1321
TspDTI ATGAA 8 cut(s) 334, 572, 806, 875, 881, 1103, 1208, 1550
TspRI CASTG 1 cut(s) 1326
VpaK11BI GGWCC 1 cut(s) 1408
XapI RAATTY 4 cut(s) 207, 362, 1092, 1669
XceI RCATGY 2 cut(s) 355, 1350
XcmI CCANNNNNNNNNTGG 1 cut(s) 1533
XmiI GTMKAC 1 cut(s) 228
XmnI GAANNNNTTC 1 cut(s) 779
XspI CTAG 2 cut(s) 680, 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.