Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0016566

Physical Location & Seq

Genomic Coordinates Reverse (-)

26641514 .. 26643925

Gene Structure 2412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00187240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGAGAGCCGTCTCCAAGTTCAAATACAAAGCATGGCGTCCACTCTCACTCTCACTCTCACTCTCACGTTCTTGCTCTCACATGGCCACCGTCACAGAATCACCGACTCTGGTCGAACAGTTCACCCAGTTCTGCTACCAGAGAGACCTCCCCAGAGCCATGACGGCCATGGAAGCTATGCAAAGACGTGGACTCTGGGCCGACTCAGTAGTCTACTCGGAGCTCATCAAGTGCTGCCTGGCTCGTCGCGCCGTTCAACAAGGCAGGCTCGTCCACAAGCACGTTTTCTCAAAAGGGCACCACCCCCAAACCTTTTTGATCAACATCTTCATAAACATGTATGTCAAATTTTCTCTATTGGATGAAGCAGAGCAACTGTTCGACAAAATGCCTGAGAGGAATGTGATTTCCTGGACGACTATGATTTCAGCTTACTGTCATGCGAAGATGAACAGCAAGGCATTGGAGTCTTTGGTTTTGATGCTTAGAGAGGGTGTGTGGCCGAATAGCTTCACATACTCTTCGGTTTTGAGGGCTTGCGAGGGGTTGGGGAATCTCAAGCAGCTGCATTGTTGTATTGTTAAAGTGGGGTTAGAGTCTGATGTGTTTGTTCGGAGTGCTCTGATTGATGTCTACTCGAAATTGGGTGACTTGCATAATGCGCTAGGCGTTTTCAATGAGATGGTGACTGGGGATTCGGTTGTTTGGAGCTCCATCATTGGAGCTTTTGCGCAGAACAGTGATGGCGATGAAGCTCTGGATCTTTTCAAGAGGATGAAGAGAGCAGGTTTTGGAGCTGAAGAGGCGACGTTGACGAGTGTCTTGAGAGCCTGTACATCGTTGGCACTTTTGGAATTGGGGAGACAAGTCCATGTTCATGCACTGAAGTATGGTCCGGATTTAATTCTGAACAATGCACTTCTGGATATGTATTGCAAGTGTGGAAGTTTGGAAGATGCAAATGCTGTTTTTACGAGGATGGTGGAGAAGGATGTAATCTCTTGGAGCACCATGATTGCAGGGTTGGCTCAAAATGGTTTCAGCCAAGAGGCACTGAAGTTGTTCGAGGAAATGAAGGTTTCGCGGACAAAACCAAACTACATCACAGTTCTTGGGGTTCTGTTTGCTTGTAGTCATGCGGGGCTTTTAGAAGAGGGGTGGTACTACTTCCAGAATATGAAGCAGCTCTTCGGGATTGATCCTGGAAGAGAGCACTATGGTTGTGTTATTGATCTTCTTGGAAGGGCTGGGAAGCTTGACGAGGCAGCAAGGTTGATTCAAGAAATGCAATGTGAACCAGATGCAGTGACATGGAGGACTTTGCTCGGCGCATGCAGGGTTCATCGGAATGTTGATCTTGCTACACATGCTGCCAAACAAATTCTGAGAATGGACCCTGATGATGCTGGAACCTACATATTATTATCCAATCTATATGCAATTTCTCAGAGATGGGATGATGCTGCAGAAGTTAGGAAGAGTATGAGAGCCAGAGGAATCACCAAAGAACCAGGGTGTAGTTGGATTGAAGTGAACAAACAGATCCATGCGTTTATTATGGGAGATGACTCGCATCCACAAATAGAAGAGATCAATAAGGAGCTAAACTTCTTGATTGATAGACTCATGGGAATAGGTTATGTTCCAGATACGAACTTTGTTTTGCAAGATCTTGAGGGAGAACAGAGGGAGGCTTCTCTTCTATCGCACAGTGAAAGATTGGCCATTGTATTTGGTATAATGAACTTGCCTAAGGGAATGACTGTTAGGGTCAGGAAAAACCTCAGGATCTGTGGAGACTGTCATGTATTTGCAAAACTTGTAGCAAAGTTGGAGCAGAGAACTATTGTGATAAGAGATCCCATTCGGTACCACCATTTTCAAGATGGAGTGAAAAGAAGCCTCCTGAAAGACCAAGTTGGTGCTCAAAATGGACTCTCACAGAATTGTTTGATGAAATTGGAGCTGATAGAGACAACGCCAACAATGGCGGATCTCATATTAGCAGATATTTTCCAGCTCATCGGCTTTCCAGAAACTATAAGCTGCAAAGCTTGGATGAGCATCGAATGTCCCTCAACTTTAGATGGCACCTTTTCCTTCTACCAGCAGAAGGTTTCTGTTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

709

Amino Acids

79.96

Weight (kDa)

7.03

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	133 - 180	8.7e-11	PPR repeat family
PPR_2	PF13041	232 - 278	6e-07	PPR repeat family
PPR	PF01535	234 - 264	2.8e-07	PPR repeat
PPR_1	PF12854	328 - 359	7e-06	PPR repeat
PPR_2	PF13041	330 - 371	3.2e-08	PPR repeat family
PPR	PF01535	333 - 360	1.2e-07	PPR repeat
E_motif	PF20431	448 - 510	9.8e-21	E motif
DYW_deaminase	PF14432	546 - 631	8.3e-31	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03880
fragaria_vesca	FvH4_2g16980
malus_domestica	MD05G1142000.v1.1 MD05G1142900.v1.1
prunus_persica	Prupe.8G181700_v2.0.a1
pyrus_communis	pycom05g13740
rosa_chinensis	RchiOBHm_Chr6g0281171
rosa_laevigata	RLG00000012988
rosa_multiflora	Rmu_sc0001705.1_g000021 Rmu_sc0035650.1_g000002
rosa_roxburghii	Rroxscaffold_7G00187240
rosa_rugosa	Rorug06G0139500
rosa_samantha	Rh6DG245900
rosa_wichuraiana	Rw6G021820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	209
Acc16I	TGCGCA	1 cut(s)	732
Acc36I	ACCTGC	1 cut(s)	776
Acc65I	GGTACC	1 cut(s)	1869
AccB1I	GGYRCC	3 cut(s)	297, 1869, 2090
AccI	GTMKAC	2 cut(s)	213, 633
AccII	CGCG	2 cut(s)	249, 1084
AccIII	TCCGGA	1 cut(s)	895
AciI	CCGC	3 cut(s)	1084, 1139, 1991
AclWI	GGATC	6 cut(s)	768, 1193, 1537, 1796, 1853, 2001
AcoI	YGGCCR	4 cut(s)	84, 165, 500, 1722
AcsI	RAATTY	2 cut(s)	347, 1380
AcuI	CTGAAG	3 cut(s)	819, 905, 1076
AcyI	GRCGYC	1 cut(s)	37
AfaI	GTAC	3 cut(s)	835, 1163, 1871
AfiI	CCNNNNNNNGG	1 cut(s)	2113
AflIII	ACRYGT	1 cut(s)	336
AgsI	TTSAA	7 cut(s)	22, 257, 676, 769, 1280, 1529, 1883
AjiI	CACGTC	1 cut(s)	188
AjnI	CCWGG	4 cut(s)	237, 410, 1201, 1510
Alw21I	GWGCWC	6 cut(s)	225, 622, 713, 1010, 1215, 1927
Alw26I	GTCTC	5 cut(s)	16, 138, 856, 1791, 1967
AlwI	GGATC	6 cut(s)	768, 1193, 1537, 1796, 1853, 2001
AlwNI	CAGNNNCTG	1 cut(s)	1791
Aor13HI	TCCGGA	1 cut(s)	895
AoxI	GGCC	5 cut(s)	84, 165, 198, 500, 1722
ApeKI	GCWGC	8 cut(s)	234, 562, 565, 1183, 1265, 1370, 1463, 2046
ApoI	RAATTY	2 cut(s)	347, 1380
ArsI	GACNNNNNNTTYG	2 cut(s)	679, 711
Asp700I	GAANNNNTTC	2 cut(s)	509, 1061
Asp718I	GGTACC	1 cut(s)	1869
AspLEI	GCGC	4 cut(s)	251, 664, 733, 1331
AspS9I	GGNCC	3 cut(s)	198, 893, 1393
AsuHPI	GGTGA	5 cut(s)	93, 115, 659, 697, 1492
AvaII	GGWCC	2 cut(s)	893, 1393
AxyI	CCTNAGG	2 cut(s)	1752, 1784
BaeGI	GKGCMC	1 cut(s)	300
BalI	TGGCCA	2 cut(s)	86, 1724
BanI	GGYRCC	3 cut(s)	297, 1869, 2090
BanII	GRGCYC	2 cut(s)	225, 713
Bbv12I	GWGCWC	6 cut(s)	225, 622, 713, 1010, 1215, 1927
BbvI	GCAGC	8 cut(s)	221, 552, 574, 1195, 1277, 1357, 1450, 2033
BccI	CCATC	7 cut(s)	676, 722, 737, 973, 1446, 1880, 2081
BceAI	ACGGC	2 cut(s)	180, 236
BciT130I	CCWGG	4 cut(s)	239, 412, 1203, 1512
BclI	TGATCA	1 cut(s)	318
BcoDI	GTCTC	5 cut(s)	16, 138, 856, 1791, 1967
BfaI	CTAG	1 cut(s)	665
BfmI	CTRYAG	1 cut(s)	1464
BfuAI	ACCTGC	1 cut(s)	776
BglI	GCCNNNNNGGC	1 cut(s)	164
BglII	AGATCT	1 cut(s)	1669
BisI	GCNGC	8 cut(s)	235, 563, 566, 1184, 1266, 1371, 1464, 2047
BlsI	GCNGC	8 cut(s)	236, 564, 567, 1185, 1267, 1372, 1465, 2048
Bme1390I	CCNGG	4 cut(s)	239, 412, 1203, 1512
Bme18I	GGWCC	2 cut(s)	893, 1393
BmgBI	CACGTC	1 cut(s)	188
BmgT120I	GGNCC	3 cut(s)	198, 893, 1393
BmiI	GGNNCC	5 cut(s)	299, 1395, 1411, 1871, 2092
BmrFI	CCNGG	4 cut(s)	239, 412, 1203, 1512
BmrI	ACTGGG	2 cut(s)	121, 699
BmsI	GCATC	7 cut(s)	471, 946, 1291, 1393, 1450, 1582, 2073
BmuI	ACTGGG	2 cut(s)	121, 699
BoxI	GACNNNNGTC	2 cut(s)	110, 818
BpuEI	CTTGAG	3 cut(s)	542, 844, 1694
BsaBI	GATNNNNATC	2 cut(s)	323, 2063
BsaHI	GRCGYC	1 cut(s)	37
BsaI	GGTCTC	1 cut(s)	138
BsaJI	CCNNGG	2 cut(s)	168, 1511
BsaWI	WCCGGW	1 cut(s)	895
Bsc4I	CCNNNNNNNGG	1 cut(s)	2113
Bse1I	ACTGG	2 cut(s)	127, 694
Bse21I	CCTNAGG	2 cut(s)	1752, 1784
Bse3DI	GCAATG	1 cut(s)	1295
Bse8I	GATNNNNATC	2 cut(s)	323, 2063
BseAI	TCCGGA	1 cut(s)	895
BseBI	CCWGG	4 cut(s)	239, 412, 1203, 1512
BseDI	CCNNGG	2 cut(s)	168, 1511
BseGI	GGATG	7 cut(s)	367, 780, 984, 997, 1462, 1573, 2064
BseJI	GATNNNNATC	2 cut(s)	323, 2063
BseLI	CCNNNNNNNGG	1 cut(s)	2113
BseMI	GCAATG	1 cut(s)	1295
BseMII	CTCAG	5 cut(s)	219, 384, 1376, 1460, 1798
BseNI	ACTGG	2 cut(s)	127, 694
BseSI	GKGCMC	1 cut(s)	300
BseXI	GCAGC	8 cut(s)	221, 552, 574, 1195, 1277, 1357, 1450, 2033
BseYI	CCCAGC	1 cut(s)	1247
Bsh1236I	CGCG	2 cut(s)	249, 1084
BshFI	GGCC	5 cut(s)	86, 167, 200, 502, 1724
BshNI	GGYRCC	3 cut(s)	297, 1869, 2090
BsiHKAI	GWGCWC	6 cut(s)	225, 622, 713, 1010, 1215, 1927
BsiSI	CCGG	1 cut(s)	896
BslFI	GGGAC	1 cut(s)	2058
BslI	CCNNNNNNNGG	1 cut(s)	2113
BsmAI	GTCTC	5 cut(s)	16, 138, 856, 1791, 1967
BsmBI	CGTCTC	1 cut(s)	16
BsmFI	GGGAC	1 cut(s)	2058
BsnI	GGCC	5 cut(s)	86, 167, 200, 502, 1724
Bso31I	GGTCTC	1 cut(s)	138
Bsp1286I	GDGCHC	7 cut(s)	225, 300, 622, 713, 1010, 1215, 1927
Bsp13I	TCCGGA	1 cut(s)	895
Bsp1407I	TGTACA	1 cut(s)	833
Bsp19I	CCATGG	1 cut(s)	168
BspACI	CCGC	3 cut(s)	1084, 1139, 1991
BspANI	GGCC	5 cut(s)	86, 167, 200, 502, 1724
BspCNI	CTCAG	5 cut(s)	218, 385, 1377, 1459, 1797
BspEI	TCCGGA	1 cut(s)	895
BspFNI	CGCG	2 cut(s)	249, 1084
BspLI	GGNNCC	5 cut(s)	299, 1395, 1411, 1871, 2092
BspMAI	CTGCAG	1 cut(s)	1468
BspMI	ACCTGC	1 cut(s)	776
BspPI	GGATC	6 cut(s)	768, 1193, 1537, 1796, 1853, 2001
BspQI	GCTCTTC	1 cut(s)	1193
BspT107I	GGYRCC	3 cut(s)	297, 1869, 2090
BspTNI	GGTCTC	1 cut(s)	138
BsrDI	GCAATG	1 cut(s)	1295
BsrGI	TGTACA	1 cut(s)	833
BsrI	ACTGG	2 cut(s)	127, 694
BssECI	CCNNGG	2 cut(s)	168, 1511
BssNI	GRCGYC	1 cut(s)	37
BssT1I	CCWWGG	1 cut(s)	168
Bst2UI	CCWGG	4 cut(s)	239, 412, 1203, 1512
Bst4CI	ACNGT	9 cut(s)	91, 120, 378, 437, 740, 1108, 1712, 1765, 1802
Bst6I	CTCTTC	9 cut(s)	526, 773, 795, 1146, 1193, 1201, 1472, 1581, 1704
BstACI	GRCGYC	1 cut(s)	37
BstAUI	TGTACA	1 cut(s)	833
BstC8I	GCNNGC	3 cut(s)	266, 538, 1333
BstDEI	CTNAG	7 cut(s)	205, 393, 485, 1385, 1446, 1752, 1784
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	7 cut(s)	367, 780, 984, 997, 1462, 1573, 2064
BstFNI	CGCG	2 cut(s)	249, 1084
BstHHI	GCGC	4 cut(s)	251, 664, 733, 1331
BstMAI	GTCTC	5 cut(s)	16, 138, 856, 1791, 1967
BstMWI	GCNNNNNNNGC	7 cut(s)	164, 173, 248, 661, 803, 1025, 1367
BstNI	CCWGG	4 cut(s)	239, 412, 1203, 1512
BstNSI	RCATGY	3 cut(s)	340, 1335, 1370
BstPAI	GACNNNNGTC	2 cut(s)	110, 818
BstSCI	CCNGG	4 cut(s)	237, 410, 1201, 1510
BstSFI	CTRYAG	1 cut(s)	1464
BstSLI	GKGCMC	1 cut(s)	300
BstUI	CGCG	2 cut(s)	249, 1084
BstV1I	GCAGC	8 cut(s)	221, 552, 574, 1195, 1277, 1357, 1450, 2033
BstX2I	RGATCY	6 cut(s)	760, 1542, 1669, 1788, 1858, 1993
BstYI	RGATCY	6 cut(s)	760, 1542, 1669, 1788, 1858, 1993
Bsu36I	CCTNAGG	2 cut(s)	1752, 1784
BsuRI	GGCC	5 cut(s)	86, 167, 200, 502, 1724
BtgI	CCRYGG	1 cut(s)	168
BtgZI	GCGATG	1 cut(s)	762
BtrI	CACGTC	1 cut(s)	188
BtsCI	GGATG	7 cut(s)	367, 780, 984, 997, 1462, 1573, 2064
BtsI	GCAGTG	1 cut(s)	1311
BtsIMutI	CAGTG	5 cut(s)	745, 881, 1052, 1311, 1717
BveI	ACCTGC	1 cut(s)	776
Cac8I	GCNNGC	3 cut(s)	266, 538, 1333
CaiI	CAGNNNCTG	1 cut(s)	1791
CfoI	GCGC	4 cut(s)	251, 664, 733, 1331
Cfr13I	GGNCC	3 cut(s)	198, 893, 1393
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	3 cut(s)	834, 1162, 1870
CviQI	GTAC	3 cut(s)	834, 1162, 1870
DdeI	CTNAG	7 cut(s)	205, 393, 485, 1385, 1446, 1752, 1784
DrdI	GACNNNNNNGTC	1 cut(s)	209
DseDI	GACNNNNNNGTC	1 cut(s)	209
EaeI	YGGCCR	4 cut(s)	84, 165, 500, 1722
Eam1104I	CTCTTC	9 cut(s)	526, 773, 795, 1146, 1193, 1201, 1472, 1581, 1704
EarI	CTCTTC	9 cut(s)	526, 773, 795, 1146, 1193, 1201, 1472, 1581, 1704
EciI	GGCGGA	1 cut(s)	2006
Ecl136II	GAGCTC	2 cut(s)	223, 711
Eco130I	CCWWGG	1 cut(s)	168
Eco24I	GRGCYC	2 cut(s)	225, 713
Eco31I	GGTCTC	1 cut(s)	138
Eco47I	GGWCC	2 cut(s)	893, 1393
Eco53kI	GAGCTC	2 cut(s)	223, 711
Eco57I	CTGAAG	3 cut(s)	819, 905, 1076
Eco81I	CCTNAGG	2 cut(s)	1752, 1784
EcoICRI	GAGCTC	2 cut(s)	223, 711
EcoRII	CCWGG	4 cut(s)	237, 410, 1201, 1510
EcoT14I	CCWWGG	1 cut(s)	168
EcoT38I	GRGCYC	2 cut(s)	225, 713
ErhI	CCWWGG	1 cut(s)	168
Esp3I	CGTCTC	1 cut(s)	16
FalI	AAGNNNNNCTT	2 cut(s)	1172, 1204
FaqI	GGGAC	1 cut(s)	2058
FauI	CCCGC	1 cut(s)	1132
FbaI	TGATCA	1 cut(s)	318
FblI	GTMKAC	2 cut(s)	213, 633
Fnu4HI	GCNGC	8 cut(s)	235, 563, 566, 1184, 1266, 1371, 1464, 2047
FokI	GGATG	7 cut(s)	374, 787, 991, 1004, 1469, 1560, 2071
FriOI	GRGCYC	2 cut(s)	225, 713
Fsp4HI	GCNGC	8 cut(s)	235, 563, 566, 1184, 1266, 1371, 1464, 2047
FspBI	CTAG	1 cut(s)	665
FspI	TGCGCA	1 cut(s)	732
GlaI	GCGC	4 cut(s)	250, 663, 732, 1330
GluI	GCNGC	8 cut(s)	235, 563, 566, 1184, 1266, 1371, 1464, 2047
GsaI	CCCAGC	1 cut(s)	1251
HaeIII	GGCC	5 cut(s)	86, 167, 200, 502, 1724
HapII	CCGG	1 cut(s)	896
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	4 cut(s)	251, 664, 733, 1331
Hin1I	GRCGYC	1 cut(s)	37
Hin6I	GCGC	4 cut(s)	249, 662, 731, 1329
HinP1I	GCGC	4 cut(s)	249, 662, 731, 1329
HincII	GTYRAC	1 cut(s)	813
HindII	GTYRAC	1 cut(s)	813
HindIII	AAGCTT	2 cut(s)	1253, 2052
HpaII	CCGG	1 cut(s)	896
HphI	GGTGA	5 cut(s)	93, 115, 659, 697, 1492
Hpy166II	GTNNAC	9 cut(s)	41, 123, 191, 214, 274, 634, 813, 1295, 1534
Hpy188I	TCNGA	8 cut(s)	220, 601, 615, 624, 909, 1347, 1386, 1449
Hpy8I	GTNNAC	9 cut(s)	41, 123, 191, 214, 274, 634, 813, 1295, 1534
Hpy99I	CGWCG	2 cut(s)	249, 811
HpyAV	CCTTC	5 cut(s)	982, 1069, 1236, 2107, 2110
HpyCH4III	ACNGT	9 cut(s)	91, 120, 378, 437, 740, 1108, 1712, 1765, 1802
HpyCH4IV	ACGT	4 cut(s)	67, 187, 282, 809
HpyF10VI	GCNNNNNNNGC	7 cut(s)	164, 173, 248, 661, 803, 1025, 1367
HpyF3I	CTNAG	7 cut(s)	205, 393, 485, 1385, 1446, 1752, 1784
HpySE526I	ACGT	4 cut(s)	67, 187, 282, 809
Hsp92I	GRCGYC	1 cut(s)	37
HspAI	GCGC	4 cut(s)	249, 662, 731, 1329
Kpn2I	TCCGGA	1 cut(s)	895
KpnI	GGTACC	1 cut(s)	1873
Ksp22I	TGATCA	1 cut(s)	318
LguI	GCTCTTC	1 cut(s)	1193
LmnI	GCTCC	9 cut(s)	220, 708, 716, 722, 794, 1005, 1600, 1834, 1963
Lsp1109I	GCAGC	8 cut(s)	221, 552, 574, 1195, 1277, 1357, 1450, 2033
LweI	GCATC	7 cut(s)	471, 946, 1291, 1393, 1450, 1582, 2073
MaeI	CTAG	1 cut(s)	665
MaeII	ACGT	4 cut(s)	67, 187, 282, 809
MaeIII	GTNAC	4 cut(s)	91, 647, 685, 1306
MflI	RGATCY	6 cut(s)	760, 1542, 1669, 1788, 1858, 1993
MhlI	GDGCHC	7 cut(s)	225, 300, 622, 713, 1010, 1215, 1927
MlsI	TGGCCA	2 cut(s)	86, 1724
MluCI	AATT	8 cut(s)	347, 641, 854, 903, 1380, 1440, 1945, 1958
MluNI	TGGCCA	2 cut(s)	86, 1724
MlyI	GAGTC	8 cut(s)	100, 186, 197, 476, 605, 1562, 1617, 1929
MmeI	TCCRAC	2 cut(s)	1502, 1812
Mox20I	TGGCCA	2 cut(s)	86, 1724
MroI	TCCGGA	1 cut(s)	895
MroXI	GAANNNNTTC	2 cut(s)	509, 1061
MscI	TGGCCA	2 cut(s)	86, 1724
MseI	TTAA	2 cut(s)	582, 902
MslI	CAYNNNNRTG	3 cut(s)	335, 876, 1347
Msp20I	TGGCCA	2 cut(s)	86, 1724
MspA1I	CMGCKG	1 cut(s)	565
MspI	CCGG	1 cut(s)	896
MspR9I	CCNGG	4 cut(s)	239, 412, 1203, 1512
MvaI	CCWGG	4 cut(s)	239, 412, 1203, 1512
MvnI	CGCG	2 cut(s)	249, 1084
MwoI	GCNNNNNNNGC	7 cut(s)	164, 173, 248, 661, 803, 1025, 1367
NcoI	CCATGG	1 cut(s)	168
NlaIV	GGNNCC	5 cut(s)	299, 1395, 1411, 1871, 2092
NmeAIII	GCCGAG	1 cut(s)	1305
NmuCI	GTSAC	4 cut(s)	91, 647, 685, 1306
NsbI	TGCGCA	1 cut(s)	732
NspI	RCATGY	3 cut(s)	340, 1335, 1370
PaeI	GCATGC	1 cut(s)	1335
PciI	ACATGT	1 cut(s)	336
PciSI	GCTCTTC	1 cut(s)	1193
PdmI	GAANNNNTTC	2 cut(s)	509, 1061
PfeI	GAWTC	5 cut(s)	98, 553, 695, 1276, 1497
PfoI	TCCNGGA	2 cut(s)	410, 1201
PkrI	GCNGC	8 cut(s)	236, 564, 567, 1185, 1267, 1372, 1465, 2048
PleI	GAGTC	8 cut(s)	100, 186, 197, 475, 604, 1562, 1617, 1929
PpsI	GAGTC	8 cut(s)	100, 186, 197, 475, 604, 1562, 1617, 1929
PscI	ACATGT	1 cut(s)	336
PshAI	GACNNNNGTC	2 cut(s)	110, 818
Psp124BI	GAGCTC	2 cut(s)	225, 713
Psp6I	CCWGG	4 cut(s)	237, 410, 1201, 1510
PspFI	CCCAGC	1 cut(s)	1247
PspGI	CCWGG	4 cut(s)	237, 410, 1201, 1510
PspN4I	GGNNCC	5 cut(s)	299, 1395, 1411, 1871, 2092
PspPI	GGNCC	3 cut(s)	198, 893, 1393
PstI	CTGCAG	1 cut(s)	1468
PstNI	CAGNNNCTG	1 cut(s)	1791
PsuI	RGATCY	6 cut(s)	760, 1542, 1669, 1788, 1858, 1993
PvuII	CAGCTG	1 cut(s)	565
RsaI	GTAC	3 cut(s)	835, 1163, 1871
RsaNI	GTAC	3 cut(s)	834, 1162, 1870
RseI	CAYNNNNRTG	3 cut(s)	335, 876, 1347
SacI	GAGCTC	2 cut(s)	225, 713
SapI	GCTCTTC	1 cut(s)	1193
SaqAI	TTAA	2 cut(s)	582, 902
SatI	GCNGC	8 cut(s)	235, 563, 566, 1184, 1266, 1371, 1464, 2047
Sau96I	GGNCC	3 cut(s)	198, 893, 1393
SchI	GAGTC	8 cut(s)	100, 186, 197, 476, 605, 1562, 1617, 1929
ScrFI	CCNGG	4 cut(s)	239, 412, 1203, 1512
SduI	GDGCHC	7 cut(s)	225, 300, 622, 713, 1010, 1215, 1927
SfaNI	GCATC	7 cut(s)	471, 946, 1291, 1393, 1450, 1582, 2073
SfcI	CTRYAG	1 cut(s)	1464
SinI	GGWCC	2 cut(s)	893, 1393
SmiMI	CAYNNNNRTG	3 cut(s)	335, 876, 1347
SmlI	CTYRAG	3 cut(s)	557, 823, 1673
SmoI	CTYRAG	3 cut(s)	557, 823, 1673
SphI	GCATGC	1 cut(s)	1335
Sse9I	AATT	8 cut(s)	347, 641, 854, 903, 1380, 1440, 1945, 1958
SsiI	CCGC	3 cut(s)	1084, 1139, 1991
SspMI	CTAG	1 cut(s)	665
SstI	GAGCTC	2 cut(s)	225, 713
StyD4I	CCNGG	4 cut(s)	237, 410, 1201, 1510
StyI	CCWWGG	1 cut(s)	168
TaaI	ACNGT	9 cut(s)	91, 120, 378, 437, 740, 1108, 1712, 1765, 1802
TaiI	ACGT	4 cut(s)	70, 190, 285, 812
TaqI	TCGA	5 cut(s)	114, 381, 638, 1065, 2067
TasI	AATT	8 cut(s)	347, 641, 854, 903, 1380, 1440, 1945, 1958
TatI	WGTACW	1 cut(s)	833
TfiI	GAWTC	5 cut(s)	98, 553, 695, 1276, 1497
Tru1I	TTAA	2 cut(s)	582, 902
Tru9I	TTAA	2 cut(s)	582, 902
TscAI	CASTG	5 cut(s)	745, 888, 1059, 1311, 1717
TseFI	GTSAC	4 cut(s)	91, 647, 685, 1306
TseI	GCWGC	8 cut(s)	234, 562, 565, 1183, 1265, 1370, 1463, 2046
Tsp45I	GTSAC	4 cut(s)	91, 647, 685, 1306
TspRI	CASTG	5 cut(s)	745, 888, 1059, 1311, 1717
VpaK11BI	GGWCC	2 cut(s)	893, 1393
XapI	RAATTY	2 cut(s)	347, 1380
XceI	RCATGY	3 cut(s)	340, 1335, 1370
XcmI	CCANNNNNNNNNTGG	3 cut(s)	166, 1518, 1883
XmiI	GTMKAC	2 cut(s)	213, 633
XmnI	GAANNNNTTC	2 cut(s)	509, 1061
XspI	CTAG	1 cut(s)	665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.