Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0016566

Physical Location & Seq

Genomic Coordinates Reverse (-)

24676521 .. 24678663

Gene Structure 2143 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012988

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGAGAGCCGTCTCCAAGTTCAAATACAAAGCATGGCCTCCAGTTTCACTCTCACTCTCACGTTCTTGCTCTCTCATGGCCACCGTCACAGAATCACCGACTCTGGTCGAACAGTTCACCCAGTTCTGCTACCAGAGAGACCTCCCCAGAGCCATGACGGCGATGGAAGCTATGCAAAGACGTGGACTCTGGGCCGACTCACTAGTCTACTCGGAGCTCGTCAAGTGCTGCGTGGCTCGTCGCGCCGTTCAACAAGGCAGGCTCGTCCACAAGCACGTTTTCTCAAATGGGCGCCACCCCCAAACCTTTTTGATCAACATCTTCATAAACATGTATGTCAAATTTTCTCTATTGGATGAAGCAGAGCAACTGTTCGACAAAATGCCTGAGAGGAATGTGATTTCCTGGACGACTATGATTTCAGCTTATTGTCATGCCAAGATGAACAGCAAGGCCTTGGAGTCTTTGGTTTTGATGCTTAGAGAGGGTGTGTGTCCGAATAGCTTCACATACTCTTCGGTTTTGAGGGCTTGCGAGGGGTTATGGAATCTTAAACAGCTGCATTGTAGTATTGTTAAAGCTGGGTTAGAGTCTGATGTGTTTGTTCGGAGTGCTCTGATTGATGTCTACTCGAAATTGGGTGACTTGCATAATGCGCTAGGCGTTTTCAATGAGATGGCGACTGGGGATTCGGTTGTTTGGAGCTCTATCATTGGAGCTTTTGCGCAGAACAGTGATGGCGATGAAGCTCTGGATCTTTTCAAGAGGATGAAGAGAGCAGGTTTTGGAGCTGAAGAGGCGACGTTGACTAGTGTCTTGAGAGCCTGTACATCGTTGGCACTTTTGGAATTGGGGAGACAAGTCCATGTTCATGCACTGAAGTATGGTCCAGATTTAATTCTGAACAATGCGCTTCTGGATATGTATTGCAAGTGTGGAAGTTTGGAAGATGCAAATGCTGTTTTTACGAGGATGGTGGAGAAGGATGTAATCTCTTGGAGCACCATGATTGCAGGGTTGGCACAAAATGGTTTCAGCCAAGAGGCACTGAAGTTGTTCGAGGAAATGAAGGTTTCACGGACAAAACCAAACTACATCACAGTTCTTGGGGTTCTGTTTGCTTGTAGTCATGCGGGGCTTTTAGAAGAGGGGTGGTACTACTTCCAGAATATGAAGCAGCTCTTCGGGATTGATCCTGGAAGAGAGCACTATGGTTGTGTTATTGATCTTCTTGGAAGGGCTGGGAAGCTTGACGAGGCAGCAAGACTCATGGGAATAGGTTATGTTCCAGATACGAACTTTGTTTTGCAAGATCTTGAGGGAGAACAGAGGGAGGCTTCTCTTCTATCCCACAGTGAAAGATTGGCCATTGTATTTGGTATAATGAACTTGCCTAAGGGAATGACTATTAGGGTCAGGAAAAACCTCAGGATCTGTGGAGACTGCCATGTATTTGCAAAACTTGTAGCAAAGTTGGAGCAGAGAACTATTGTGATAAGAGATCCCATTCGGTACCACCATTTTCAAGATGGACCTCCTGAAAGACCAAGTTGGTGCTCAAAATGGACTCTCACAGAATTGTTTGATGAAATTGGAGCTGATAGAGACAATGCCAACAATGGCGGATTTCATATTAGCAGATATTTTCCAGCTCATCAGCTTTCCAGAAACTATAAGCTGCAAAGCTTGGATGAGCAACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

568

Amino Acids

63.97

Weight (kDa)

7.84

Isoelectric Point (pI)

39.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	131 - 178	1.8e-11	PPR repeat family
PPR_2	PF13041	230 - 276	4.5e-07	PPR repeat family
PPR	PF01535	232 - 262	2.1e-07	PPR repeat
PPR_1	PF12854	326 - 357	5.3e-06	PPR repeat
PPR_2	PF13041	328 - 369	2.4e-08	PPR repeat family
PPR	PF01535	331 - 358	8.9e-08	PPR repeat
DYW_deaminase	PF14432	427 - 511	4e-31	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03880
fragaria_vesca	FvH4_2g16980
malus_domestica	MD05G1142000.v1.1 MD05G1142900.v1.1
prunus_persica	Prupe.8G181700_v2.0.a1
pyrus_communis	pycom05g13740
rosa_chinensis	RchiOBHm_Chr6g0281171
rosa_laevigata	RLG00000012988
rosa_multiflora	Rmu_sc0001705.1_g000021 Rmu_sc0035650.1_g000002
rosa_roxburghii	Rroxscaffold_7G00187240
rosa_rugosa	Rorug06G0139500
rosa_samantha	Rh6DG245900
rosa_wichuraiana	Rw6G021820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	203
Acc16I	TGCGCA	1 cut(s)	726
Acc36I	ACCTGC	1 cut(s)	770
Acc65I	GGTACC	1 cut(s)	1512
AccB1I	GGYRCC	2 cut(s)	291, 1512
AccI	GTMKAC	2 cut(s)	207, 627
AccII	CGCG	1 cut(s)	243
AciI	CCGC	2 cut(s)	1133, 1623
AclWI	GGATC	4 cut(s)	762, 1187, 1439, 1496
AcoI	YGGCCR	2 cut(s)	78, 1365
AcsI	RAATTY	1 cut(s)	341
AcuI	CTGAAG	3 cut(s)	813, 899, 1070
AcyI	GRCGYC	1 cut(s)	292
AfaI	GTAC	3 cut(s)	829, 1157, 1514
AflIII	ACRYGT	1 cut(s)	330
AgsI	TTSAA	5 cut(s)	22, 251, 670, 763, 1526
AhlI	ACTAGT	2 cut(s)	202, 809
AjiI	CACGTC	1 cut(s)	182
AjnI	CCWGG	2 cut(s)	404, 1195
Alw21I	GWGCWC	6 cut(s)	219, 616, 707, 1004, 1209, 1559
Alw26I	GTCTC	5 cut(s)	16, 132, 850, 1434, 1599
AlwI	GGATC	4 cut(s)	762, 1187, 1439, 1496
AlwNI	CAGNNNCTG	1 cut(s)	1434
AoxI	GGCC	5 cut(s)	35, 78, 192, 453, 1365
ApeKI	GCWGC	5 cut(s)	228, 559, 1177, 1259, 1678
ApoI	RAATTY	1 cut(s)	341
ArsI	GACNNNNNNTTYG	2 cut(s)	673, 705
Asp700I	GAANNNNTTC	2 cut(s)	503, 1055
Asp718I	GGTACC	1 cut(s)	1512
AspLEI	GCGC	5 cut(s)	245, 294, 658, 727, 913
AspS9I	GGNCC	3 cut(s)	192, 887, 1532
AsuHPI	GGTGA	3 cut(s)	87, 109, 653
AvaII	GGWCC	2 cut(s)	887, 1532
AxyI	CCTNAGG	2 cut(s)	1395, 1427
BalI	TGGCCA	2 cut(s)	80, 1367
BanI	GGYRCC	2 cut(s)	291, 1512
BanII	GRGCYC	2 cut(s)	219, 707
Bbv12I	GWGCWC	6 cut(s)	219, 616, 707, 1004, 1209, 1559
BbvI	GCAGC	5 cut(s)	215, 546, 1189, 1271, 1665
BccI	CCATC	5 cut(s)	157, 670, 731, 967, 1523
BceAI	ACGGC	2 cut(s)	174, 230
BciT130I	CCWGG	2 cut(s)	406, 1197
BclI	TGATCA	1 cut(s)	312
BcoDI	GTCTC	5 cut(s)	16, 132, 850, 1434, 1599
BcuI	ACTAGT	2 cut(s)	202, 809
BfaI	CTAG	3 cut(s)	203, 659, 810
BfoI	RGCGCY	1 cut(s)	295
BfuAI	ACCTGC	1 cut(s)	770
BglI	GCCNNNNNGGC	1 cut(s)	158
BglII	AGATCT	1 cut(s)	1312
BisI	GCNGC	5 cut(s)	229, 560, 1178, 1260, 1679
BlsI	GCNGC	5 cut(s)	230, 561, 1179, 1261, 1680
Bme1390I	CCNGG	2 cut(s)	406, 1197
Bme18I	GGWCC	2 cut(s)	887, 1532
BmgBI	CACGTC	1 cut(s)	182
BmgT120I	GGNCC	3 cut(s)	192, 887, 1532
BmiI	GGNNCC	2 cut(s)	293, 1514
BmrFI	CCNGG	2 cut(s)	406, 1197
BmrI	ACTGGG	2 cut(s)	115, 693
BmsI	GCATC	2 cut(s)	465, 940
BmuI	ACTGGG	2 cut(s)	115, 693
BoxI	GACNNNNGTC	2 cut(s)	104, 812
BpmI	CTGGAG	1 cut(s)	24
BpuEI	CTTGAG	2 cut(s)	838, 1337
BsaBI	GATNNNNATC	1 cut(s)	317
BsaHI	GRCGYC	1 cut(s)	292
BsaI	GGTCTC	1 cut(s)	132
BsaJI	CCNNGG	1 cut(s)	456
Bse1I	ACTGG	3 cut(s)	41, 121, 688
Bse21I	CCTNAGG	2 cut(s)	1395, 1427
Bse8I	GATNNNNATC	1 cut(s)	317
BseBI	CCWGG	2 cut(s)	406, 1197
BseDI	CCNNGG	1 cut(s)	456
BseGI	GGATG	5 cut(s)	361, 774, 978, 991, 1696
BseJI	GATNNNNATC	1 cut(s)	317
BseMII	CTCAG	2 cut(s)	378, 1441
BseNI	ACTGG	3 cut(s)	41, 121, 688
BseXI	GCAGC	5 cut(s)	215, 546, 1189, 1271, 1665
BseYI	CCCAGC	2 cut(s)	581, 1241
Bsh1236I	CGCG	1 cut(s)	243
BshFI	GGCC	5 cut(s)	37, 80, 194, 455, 1367
BshNI	GGYRCC	2 cut(s)	291, 1512
BsiHKAI	GWGCWC	6 cut(s)	219, 616, 707, 1004, 1209, 1559
BsmAI	GTCTC	5 cut(s)	16, 132, 850, 1434, 1599
BsmBI	CGTCTC	1 cut(s)	16
BsnI	GGCC	5 cut(s)	37, 80, 194, 455, 1367
Bso31I	GGTCTC	1 cut(s)	132
Bsp1286I	GDGCHC	6 cut(s)	219, 616, 707, 1004, 1209, 1559
Bsp1407I	TGTACA	1 cut(s)	827
Bsp143I	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
BspACI	CCGC	2 cut(s)	1133, 1623
BspANI	GGCC	5 cut(s)	37, 80, 194, 455, 1367
BspCNI	CTCAG	2 cut(s)	379, 1440
BspFNI	CGCG	1 cut(s)	243
BspLI	GGNNCC	2 cut(s)	293, 1514
BspMI	ACCTGC	1 cut(s)	770
BspPI	GGATC	4 cut(s)	762, 1187, 1439, 1496
BspQI	GCTCTTC	1 cut(s)	1187
BspT107I	GGYRCC	2 cut(s)	291, 1512
BspTNI	GGTCTC	1 cut(s)	132
BsrGI	TGTACA	1 cut(s)	827
BsrI	ACTGG	3 cut(s)	41, 121, 688
BssECI	CCNNGG	1 cut(s)	456
BssMI	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
BssNI	GRCGYC	1 cut(s)	292
BssT1I	CCWWGG	1 cut(s)	456
Bst2UI	CCWGG	2 cut(s)	406, 1197
Bst4CI	ACNGT	6 cut(s)	85, 114, 372, 734, 1102, 1355
Bst6I	CTCTTC	7 cut(s)	520, 767, 789, 1140, 1187, 1195, 1347
BstACI	GRCGYC	1 cut(s)	292
BstAUI	TGTACA	1 cut(s)	827
BstC8I	GCNNGC	2 cut(s)	260, 532
BstDEI	CTNAG	4 cut(s)	387, 479, 1395, 1427
BstF5I	GGATG	5 cut(s)	361, 774, 978, 991, 1696
BstFNI	CGCG	1 cut(s)	243
BstH2I	RGCGCY	1 cut(s)	295
BstHHI	GCGC	5 cut(s)	245, 294, 658, 727, 913
BstKTI	GATC	7 cut(s)	315, 757, 1195, 1228, 1315, 1434, 1504
BstMAI	GTCTC	5 cut(s)	16, 132, 850, 1434, 1599
BstMBI	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
BstMWI	GCNNNNNNNGC	6 cut(s)	158, 167, 242, 655, 797, 1019
BstNI	CCWGG	2 cut(s)	406, 1197
BstNSI	RCATGY	1 cut(s)	334
BstPAI	GACNNNNGTC	2 cut(s)	104, 812
BstSCI	CCNGG	2 cut(s)	404, 1195
BstUI	CGCG	1 cut(s)	243
BstV1I	GCAGC	5 cut(s)	215, 546, 1189, 1271, 1665
BstX2I	RGATCY	4 cut(s)	754, 1312, 1431, 1501
BstYI	RGATCY	4 cut(s)	754, 1312, 1431, 1501
Bsu36I	CCTNAGG	2 cut(s)	1395, 1427
BsuRI	GGCC	5 cut(s)	37, 80, 194, 455, 1367
BtgZI	GCGATG	2 cut(s)	176, 756
BtrI	CACGTC	1 cut(s)	182
BtsCI	GGATG	5 cut(s)	361, 774, 978, 991, 1696
BtsIMutI	CAGTG	4 cut(s)	739, 875, 1046, 1360
BveI	ACCTGC	1 cut(s)	770
Cac8I	GCNNGC	2 cut(s)	260, 532
CaiI	CAGNNNCTG	1 cut(s)	1434
CfoI	GCGC	5 cut(s)	245, 294, 658, 727, 913
Cfr13I	GGNCC	3 cut(s)	192, 887, 1532
Csp6I	GTAC	3 cut(s)	828, 1156, 1513
CviQI	GTAC	3 cut(s)	828, 1156, 1513
DdeI	CTNAG	4 cut(s)	387, 479, 1395, 1427
DinI	GGCGCC	1 cut(s)	293
DpnI	GATC	7 cut(s)	314, 756, 1194, 1227, 1314, 1433, 1503
DpnII	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
DrdI	GACNNNNNNGTC	1 cut(s)	203
DseDI	GACNNNNNNGTC	1 cut(s)	203
EaeI	YGGCCR	2 cut(s)	78, 1365
Eam1104I	CTCTTC	7 cut(s)	520, 767, 789, 1140, 1187, 1195, 1347
EarI	CTCTTC	7 cut(s)	520, 767, 789, 1140, 1187, 1195, 1347
EciI	GGCGGA	1 cut(s)	1638
Ecl136II	GAGCTC	2 cut(s)	217, 705
Eco130I	CCWWGG	1 cut(s)	456
Eco147I	AGGCCT	1 cut(s)	455
Eco24I	GRGCYC	2 cut(s)	219, 707
Eco31I	GGTCTC	1 cut(s)	132
Eco47I	GGWCC	2 cut(s)	887, 1532
Eco53kI	GAGCTC	2 cut(s)	217, 705
Eco57I	CTGAAG	3 cut(s)	813, 899, 1070
Eco81I	CCTNAGG	2 cut(s)	1395, 1427
EcoICRI	GAGCTC	2 cut(s)	217, 705
EcoRII	CCWGG	2 cut(s)	404, 1195
EcoT14I	CCWWGG	1 cut(s)	456
EcoT38I	GRGCYC	2 cut(s)	219, 707
EgeI	GGCGCC	1 cut(s)	293
EheI	GGCGCC	1 cut(s)	293
ErhI	CCWWGG	1 cut(s)	456
Esp3I	CGTCTC	1 cut(s)	16
FalI	AAGNNNNNCTT	2 cut(s)	1166, 1198
FauI	CCCGC	1 cut(s)	1126
FbaI	TGATCA	1 cut(s)	312
FblI	GTMKAC	2 cut(s)	207, 627
Fnu4HI	GCNGC	5 cut(s)	229, 560, 1178, 1260, 1679
FokI	GGATG	4 cut(s)	368, 781, 985, 998
FriOI	GRGCYC	2 cut(s)	219, 707
Fsp4HI	GCNGC	5 cut(s)	229, 560, 1178, 1260, 1679
FspBI	CTAG	3 cut(s)	203, 659, 810
FspI	TGCGCA	1 cut(s)	726
GlaI	GCGC	5 cut(s)	244, 293, 657, 726, 912
GluI	GCNGC	5 cut(s)	229, 560, 1178, 1260, 1679
GsaI	CCCAGC	2 cut(s)	585, 1245
GsuI	CTGGAG	1 cut(s)	24
HaeII	RGCGCY	1 cut(s)	295
HaeIII	GGCC	5 cut(s)	37, 80, 194, 455, 1367
HhaI	GCGC	5 cut(s)	245, 294, 658, 727, 913
Hin1I	GRCGYC	1 cut(s)	292
Hin6I	GCGC	5 cut(s)	243, 292, 656, 725, 911
HinP1I	GCGC	5 cut(s)	243, 292, 656, 725, 911
HincII	GTYRAC	1 cut(s)	807
HindII	GTYRAC	1 cut(s)	807
HindIII	AAGCTT	2 cut(s)	1247, 1684
HphI	GGTGA	3 cut(s)	87, 109, 653
Hpy166II	GTNNAC	6 cut(s)	117, 185, 208, 268, 628, 807
Hpy188I	TCNGA	6 cut(s)	214, 498, 595, 609, 618, 903
Hpy8I	GTNNAC	6 cut(s)	117, 185, 208, 268, 628, 807
Hpy99I	CGWCG	2 cut(s)	243, 805
HpyAV	CCTTC	3 cut(s)	976, 1063, 1230
HpyCH4III	ACNGT	6 cut(s)	85, 114, 372, 734, 1102, 1355
HpyCH4IV	ACGT	4 cut(s)	61, 181, 276, 803
HpyF10VI	GCNNNNNNNGC	6 cut(s)	158, 167, 242, 655, 797, 1019
HpyF3I	CTNAG	4 cut(s)	387, 479, 1395, 1427
HpySE526I	ACGT	4 cut(s)	61, 181, 276, 803
Hsp92I	GRCGYC	1 cut(s)	292
HspAI	GCGC	5 cut(s)	243, 292, 656, 725, 911
KasI	GGCGCC	1 cut(s)	291
KpnI	GGTACC	1 cut(s)	1516
Ksp22I	TGATCA	1 cut(s)	312
Kzo9I	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
LguI	GCTCTTC	1 cut(s)	1187
LmnI	GCTCC	7 cut(s)	214, 702, 716, 788, 999, 1477, 1595
Lsp1109I	GCAGC	5 cut(s)	215, 546, 1189, 1271, 1665
LweI	GCATC	2 cut(s)	465, 940
MaeI	CTAG	3 cut(s)	203, 659, 810
MaeII	ACGT	4 cut(s)	61, 181, 276, 803
MaeIII	GTNAC	2 cut(s)	85, 641
MalI	GATC	7 cut(s)	314, 756, 1194, 1227, 1314, 1433, 1503
MboI	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
MflI	RGATCY	4 cut(s)	754, 1312, 1431, 1501
MhlI	GDGCHC	6 cut(s)	219, 616, 707, 1004, 1209, 1559
MlsI	TGGCCA	2 cut(s)	80, 1367
MluCI	AATT	6 cut(s)	341, 635, 848, 897, 1577, 1590
MluNI	TGGCCA	2 cut(s)	80, 1367
Mly113I	GGCGCC	1 cut(s)	292
MlyI	GAGTC	7 cut(s)	94, 180, 191, 470, 599, 1260, 1561
MmeI	TCCRAC	1 cut(s)	1455
Mox20I	TGGCCA	2 cut(s)	80, 1367
MroXI	GAANNNNTTC	2 cut(s)	503, 1055
MscI	TGGCCA	2 cut(s)	80, 1367
MseI	TTAA	3 cut(s)	552, 576, 896
MslI	CAYNNNNRTG	2 cut(s)	329, 870
Msp20I	TGGCCA	2 cut(s)	80, 1367
MspA1I	CMGCKG	1 cut(s)	559
MspR9I	CCNGG	2 cut(s)	406, 1197
MvaI	CCWGG	2 cut(s)	406, 1197
MvnI	CGCG	1 cut(s)	243
MwoI	GCNNNNNNNGC	6 cut(s)	158, 167, 242, 655, 797, 1019
NarI	GGCGCC	1 cut(s)	292
NdeII	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
NlaIV	GGNNCC	2 cut(s)	293, 1514
NmuCI	GTSAC	2 cut(s)	85, 641
NsbI	TGCGCA	1 cut(s)	726
NspI	RCATGY	1 cut(s)	334
PceI	AGGCCT	1 cut(s)	455
PciI	ACATGT	1 cut(s)	330
PciSI	GCTCTTC	1 cut(s)	1187
PdmI	GAANNNNTTC	2 cut(s)	503, 1055
PfeI	GAWTC	3 cut(s)	92, 547, 689
PfoI	TCCNGGA	2 cut(s)	404, 1195
PkrI	GCNGC	5 cut(s)	230, 561, 1179, 1261, 1680
PleI	GAGTC	7 cut(s)	94, 180, 191, 469, 598, 1260, 1561
PluTI	GGCGCC	1 cut(s)	295
PpsI	GAGTC	7 cut(s)	94, 180, 191, 469, 598, 1260, 1561
PscI	ACATGT	1 cut(s)	330
PshAI	GACNNNNGTC	2 cut(s)	104, 812
Psp124BI	GAGCTC	2 cut(s)	219, 707
Psp6I	CCWGG	2 cut(s)	404, 1195
PspFI	CCCAGC	2 cut(s)	581, 1241
PspGI	CCWGG	2 cut(s)	404, 1195
PspN4I	GGNNCC	2 cut(s)	293, 1514
PspPI	GGNCC	3 cut(s)	192, 887, 1532
PstNI	CAGNNNCTG	1 cut(s)	1434
PsuI	RGATCY	4 cut(s)	754, 1312, 1431, 1501
PvuII	CAGCTG	1 cut(s)	559
RsaI	GTAC	3 cut(s)	829, 1157, 1514
RsaNI	GTAC	3 cut(s)	828, 1156, 1513
RseI	CAYNNNNRTG	2 cut(s)	329, 870
SacI	GAGCTC	2 cut(s)	219, 707
SapI	GCTCTTC	1 cut(s)	1187
SaqAI	TTAA	3 cut(s)	552, 576, 896
SatI	GCNGC	5 cut(s)	229, 560, 1178, 1260, 1679
Sau3AI	GATC	7 cut(s)	312, 754, 1192, 1225, 1312, 1431, 1501
Sau96I	GGNCC	3 cut(s)	192, 887, 1532
SchI	GAGTC	7 cut(s)	94, 180, 191, 470, 599, 1260, 1561
ScrFI	CCNGG	2 cut(s)	406, 1197
SduI	GDGCHC	6 cut(s)	219, 616, 707, 1004, 1209, 1559
SfaNI	GCATC	2 cut(s)	465, 940
SfoI	GGCGCC	1 cut(s)	293
SinI	GGWCC	2 cut(s)	887, 1532
SmiMI	CAYNNNNRTG	2 cut(s)	329, 870
SmlI	CTYRAG	2 cut(s)	817, 1316
SmoI	CTYRAG	2 cut(s)	817, 1316
SpeI	ACTAGT	2 cut(s)	202, 809
Sse9I	AATT	6 cut(s)	341, 635, 848, 897, 1577, 1590
SseBI	AGGCCT	1 cut(s)	455
SsiI	CCGC	2 cut(s)	1133, 1623
SspDI	GGCGCC	1 cut(s)	291
SspMI	CTAG	3 cut(s)	203, 659, 810
SstI	GAGCTC	2 cut(s)	219, 707
StuI	AGGCCT	1 cut(s)	455
StyD4I	CCNGG	2 cut(s)	404, 1195
StyI	CCWWGG	1 cut(s)	456
TaaI	ACNGT	6 cut(s)	85, 114, 372, 734, 1102, 1355
TaiI	ACGT	4 cut(s)	64, 184, 279, 806
TaqI	TCGA	4 cut(s)	108, 375, 632, 1059
TasI	AATT	6 cut(s)	341, 635, 848, 897, 1577, 1590
TatI	WGTACW	1 cut(s)	827
TfiI	GAWTC	3 cut(s)	92, 547, 689
Tru1I	TTAA	3 cut(s)	552, 576, 896
Tru9I	TTAA	3 cut(s)	552, 576, 896
TscAI	CASTG	4 cut(s)	739, 882, 1053, 1360
TseFI	GTSAC	2 cut(s)	85, 641
TseI	GCWGC	5 cut(s)	228, 559, 1177, 1259, 1678
Tsp45I	GTSAC	2 cut(s)	85, 641
TspGWI	ACGGA	1 cut(s)	1093
TspRI	CASTG	4 cut(s)	739, 882, 1053, 1360
VpaK11BI	GGWCC	2 cut(s)	887, 1532
XapI	RAATTY	1 cut(s)	341
XceI	RCATGY	1 cut(s)	334
XcmI	CCANNNNNNNNNTGG	2 cut(s)	160, 1526
XmiI	GTMKAC	2 cut(s)	207, 627
XmnI	GAANNNNTTC	2 cut(s)	503, 1055
XspI	CTAG	3 cut(s)	203, 659, 810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.