FvH4_2g18600

Plays an essential role in chain termination during de novo fatty acid synthesis

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
15930916 .. 15933922
3007 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g18600.t2

Sequence Viewer

Length: 1140 bp
ATGATGAAGCTTTCGTGCAATGCGGTGGACCAAATCCACGGCGGGGCCCAATGCTGCTTCCTGGGCCCGCAGAAGCGCCGGCCCGGCTACGCCCCTCGCCGGAAAGTAGCTCCGGCTTCGGTTGTTCCGTGCGCGAGTTCTTTGAAGAAAAAGGGGATTGTGGCGGTGGTGTCGGACAGGGGAGCGGTTGGGGCGGAGAATGGGCCGGGTCGGGTCGAACCCATGAGCCTGGCGGACCGGCTGAGGCAGGGGAGCTTGGCGGAGGACGGCAAGTCGTATAAGGAGTGTTTTATTGTGAGGAGCTATGAGGTTGGGATGAACAAGACTGCTACTGTCGAGACCATTGCCAATCTGTTACAGGAGGTTGGATGCAACCATGCTCAAGTTGTGGGGTTTTCAACCGACGGGTTTGCCACGACCACCACCATGAGGAAATTGCATCTAATATGGGTTACCGCTCGCATGCACATTGAAATCTACAAATATCCAGCTTGGAGTGATGTTGTTGAAATAGAAACGTGGTGCCAAGGGGAAGGAAGAATTGGAACGAGACGTGATTGGATAATCAAGGACTATGCAACTGGGAAAGTTATTGGAAGAGCGACAAGCAAGTGGGTGATGATGAACCAAGACACCAGGAGGCTTCAGAAAGTCACTGATGATGTTCGCGAGGAGCATCTAGTTTTTGCTCCACGAGAACTAAGATTAGCGTTCCCAGAGCCAAACAATAGTAGCTTGAAGAAAATTGCTAAACTGGAAGATCCTGCCGAGTATTCCAGACTAGGACTTGTGCCAAGGAGAGCGGACCTGGACATGAACCAGCATGTTAATAATGTCACCTACATCGGTTGGGTCCTAGAGAGCATGCCTCAAGAAGTCATTGATAGCCATGAACTTCAGACCATCACCTTAGATTACAGGCGGGAGTGTCAACAAGATGACATAGTTGATTCCCTTACTAATGTGGAACATGTAGAGAATGCTGAAGCAATTTTGGGTTCGAAAGGAACAAATGGGTCTCCTGCTGCATCAGAAAATCGAAACGACTACCGTCAATTCTTGCATCTACTGAGAATATCAGGCGATGGGTCAGAAATAAACAGAGGACGCACAGTGTGGAGAAAGAAGCCTGCAAGATGA

Protein Analysis

380

Amino Acids

42.51

Weight (kDa)

8.81

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl-ACP_TE PF01643 90 - 225 1.2e-44 Acyl-ACP thioesterase N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25110
fragaria_vesca FvH4_2g18600
malus_domestica MD02G1127500.v1.1 MD05G1172000.v1.1
prunus_persica Prupe.8G199400_v2.0.a1
pyrus_communis pycom02g09960 pycom05g15870
rosa_chinensis RchiOBHm_Chr6g0284171
rosa_laevigata RLG00000012762
rosa_multiflora Rmu_sc0003778.1_g000013
rosa_roxburghii Rroxscaffold_7G00184830
rosa_rugosa Rorug06G0161500
rosa_samantha Rh6BG274800 Rh6DG269200
rosa_wichuraiana Rw6G023590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 522
AccBSI CCGCTC 3 cut(s) 185, 458, 803
AccII CGCG 2 cut(s) 134, 669
AclWI GGATC 1 cut(s) 755
AcuI CTGAAG 3 cut(s) 629, 881, 1005
AdeI CACNNNGTG 1 cut(s) 1116
AfiI CCNNNNNNNGG 3 cut(s) 43, 99, 429
AflIII ACRYGT 1 cut(s) 970
AgsI TTSAA 5 cut(s) 145, 399, 473, 509, 739
AhdI GACNNNNNGTC 1 cut(s) 271
AjiI CACGTC 1 cut(s) 554
AjnI CCWGG 4 cut(s) 60, 228, 635, 807
AjuI GAANNNNNNNTTGG 2 cut(s) 525, 557
AluBI AGCT 6 cut(s) 10, 110, 255, 303, 491, 735
AluI AGCT 6 cut(s) 10, 110, 255, 303, 491, 735
Alw26I GTCTC 3 cut(s) 332, 544, 1023
AlwI GGATC 1 cut(s) 755
AoxI GGCC 4 cut(s) 45, 64, 80, 203
ApaI GGGCCC 2 cut(s) 49, 68
ApeKI GCWGC 2 cut(s) 54, 1025
AspLEI GCGC 2 cut(s) 78, 134
AsuC2I CCSGG 2 cut(s) 84, 207
AsuHPI GGTGA 3 cut(s) 628, 829, 898
AsuII TTCGAA 1 cut(s) 1001
AvaII GGWCC 4 cut(s) 28, 235, 805, 853
BaeGI GKGCMC 2 cut(s) 49, 68
BanI GGYRCC 1 cut(s) 522
BanII GRGCYC 2 cut(s) 49, 68
BauI CACGAG 1 cut(s) 693
BbvCI CCTCAGC 1 cut(s) 242
BbvI GCAGC 2 cut(s) 41, 1012
BccI CCATC 2 cut(s) 911, 1079
BceAI ACGGC 2 cut(s) 55, 283
BcgI CGANNNNNNTGC 4 cut(s) 326, 360, 392, 426
BciT130I CCWGG 4 cut(s) 62, 230, 637, 809
BcnI CCSGG 2 cut(s) 84, 207
BcoDI GTCTC 3 cut(s) 332, 544, 1023
BfaI CTAG 3 cut(s) 680, 782, 857
BfoI RGCGCY 1 cut(s) 79
BglI GCCNNNNNGGC 1 cut(s) 84
BisI GCNGC 2 cut(s) 55, 1026
BlsI GCNGC 2 cut(s) 56, 1027
Bme1390I CCNGG 6 cut(s) 62, 84, 207, 230, 637, 809
Bme18I GGWCC 4 cut(s) 28, 235, 805, 853
BmeRI GACNNNNNGTC 1 cut(s) 271
BmgBI CACGTC 1 cut(s) 554
BmiI GGNNCC 5 cut(s) 46, 47, 66, 524, 854
BmrFI CCNGG 6 cut(s) 62, 84, 207, 230, 637, 809
BmrI ACTGGG 1 cut(s) 591
BmsI GCATC 5 cut(s) 359, 448, 685, 1037, 1072
BmuI ACTGGG 1 cut(s) 591
BoxI GACNNNNGTC 1 cut(s) 1050
BplI GAGNNNNNCTC 2 cut(s) 853, 885
Bpu10I CCTNAGC 1 cut(s) 242
Bpu14I TTCGAA 1 cut(s) 1001
BpuEI CTTGAG 2 cut(s) 366, 855
BpuMI CCSGG 2 cut(s) 84, 207
BsaI GGTCTC 2 cut(s) 332, 1023
BsaJI CCNNGG 4 cut(s) 37, 61, 526, 794
Bsc4I CCNNNNNNNGG 3 cut(s) 43, 99, 429
Bse118I RCCGGY 2 cut(s) 78, 237
Bse1I ACTGG 2 cut(s) 586, 759
Bse3DI GCAATG 2 cut(s) 25, 342
BseBI CCWGG 4 cut(s) 62, 230, 637, 809
BseDI CCNNGG 4 cut(s) 37, 61, 526, 794
BseGI GGATG 2 cut(s) 321, 374
BseLI CCNNNNNNNGG 3 cut(s) 43, 99, 429
BseMI GCAATG 2 cut(s) 25, 342
BseMII CTCAG 2 cut(s) 233, 1061
BseNI ACTGG 2 cut(s) 586, 759
BseRI GAGGAG 2 cut(s) 313, 686
BseSI GKGCMC 2 cut(s) 49, 68
BseXI GCAGC 2 cut(s) 41, 1012
Bsh1236I CGCG 2 cut(s) 134, 669
BshFI GGCC 4 cut(s) 47, 66, 82, 205
BshNI GGYRCC 1 cut(s) 522
BsiSI CCGG 6 cut(s) 79, 84, 100, 113, 206, 238
BslI CCNNNNNNNGG 3 cut(s) 43, 99, 429
BsmAI GTCTC 3 cut(s) 332, 544, 1023
BsmBI CGTCTC 1 cut(s) 544
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 4 cut(s) 47, 66, 82, 205
Bso31I GGTCTC 2 cut(s) 332, 1023
Bsp119I TTCGAA 1 cut(s) 1001
Bsp120I GGGCCC 2 cut(s) 45, 64
Bsp1286I GDGCHC 2 cut(s) 49, 68
Bsp143I GATC 1 cut(s) 760
Bsp68I TCGCGA 1 cut(s) 669
BspANI GGCC 4 cut(s) 47, 66, 82, 205
BspCNI CTCAG 2 cut(s) 234, 1062
BspFNI CGCG 2 cut(s) 134, 669
BspLI GGNNCC 5 cut(s) 46, 47, 66, 524, 854
BspPI GGATC 1 cut(s) 755
BspQI GCTCTTC 1 cut(s) 592
BspT104I TTCGAA 1 cut(s) 1001
BspT107I GGYRCC 1 cut(s) 522
BspTNI GGTCTC 2 cut(s) 332, 1023
BsrBI CCGCTC 3 cut(s) 185, 458, 803
BsrDI GCAATG 2 cut(s) 25, 342
BsrFI RCCGGY 2 cut(s) 78, 237
BsrI ACTGG 2 cut(s) 586, 759
BssAI RCCGGY 2 cut(s) 78, 237
BssECI CCNNGG 4 cut(s) 37, 61, 526, 794
BssMI GATC 1 cut(s) 760
BssSI CACGAG 1 cut(s) 693
BssT1I CCWWGG 2 cut(s) 526, 794
Bst2BI CACGAG 1 cut(s) 693
Bst2UI CCWGG 4 cut(s) 62, 230, 637, 809
Bst4CI ACNGT 3 cut(s) 334, 1052, 1114
Bst6I CTCTTC 1 cut(s) 592
BstBI TTCGAA 1 cut(s) 1001
BstC8I GCNNGC 6 cut(s) 68, 80, 460, 464, 866, 1131
BstDEI CTNAG 4 cut(s) 242, 701, 910, 1070
BstDSI CCRYGG 1 cut(s) 37
BstEII GGTNACC 1 cut(s) 451
BstF5I GGATG 2 cut(s) 321, 374
BstFNI CGCG 2 cut(s) 134, 669
BstH2I RGCGCY 1 cut(s) 79
BstHHI GCGC 2 cut(s) 78, 134
BstKTI GATC 1 cut(s) 763
BstMAI GTCTC 3 cut(s) 332, 544, 1023
BstMBI GATC 1 cut(s) 760
BstMWI GCNNNNNNNGC 3 cut(s) 63, 84, 191
BstNI CCWGG 4 cut(s) 62, 230, 637, 809
BstNSI RCATGY 4 cut(s) 466, 827, 868, 974
BstPAI GACNNNNGTC 1 cut(s) 1050
BstPI GGTNACC 1 cut(s) 451
BstSCI CCNGG 6 cut(s) 60, 82, 205, 228, 635, 807
BstSLI GKGCMC 2 cut(s) 49, 68
BstUI CGCG 2 cut(s) 134, 669
BstV1I GCAGC 2 cut(s) 41, 1012
BstX2I RGATCY 1 cut(s) 760
BstXI CCANNNNNNTGG 1 cut(s) 229
BstYI RGATCY 1 cut(s) 760
BsuRI GGCC 4 cut(s) 47, 66, 82, 205
BtgI CCRYGG 1 cut(s) 37
BtgZI GCGATG 1 cut(s) 1098
BtrI CACGTC 1 cut(s) 554
BtsCI GGATG 2 cut(s) 321, 374
BtsIMutI CAGTG 2 cut(s) 654, 1119
BtuMI TCGCGA 1 cut(s) 669
Cac8I GCNNGC 6 cut(s) 68, 80, 460, 464, 866, 1131
CfoI GCGC 2 cut(s) 78, 134
Cfr10I RCCGGY 2 cut(s) 78, 237
CpoI CGGWCCG 1 cut(s) 235
CseI GACGC 1 cut(s) 1116
CspI CGGWCCG 1 cut(s) 235
CviAII CATG 9 cut(s) 223, 377, 427, 463, 814, 824, 865, 890, 971
DdeI CTNAG 4 cut(s) 242, 701, 910, 1070
DpnI GATC 1 cut(s) 762
DpnII GATC 1 cut(s) 760
DraIII CACNNNGTG 1 cut(s) 1116
DriI GACNNNNNGTC 1 cut(s) 271
Eam1104I CTCTTC 1 cut(s) 592
Eam1105I GACNNNNNGTC 1 cut(s) 271
EarI CTCTTC 1 cut(s) 592
EciI GGCGGA 3 cut(s) 209, 248, 275
Eco130I CCWWGG 2 cut(s) 526, 794
Eco24I GRGCYC 2 cut(s) 49, 68
Eco31I GGTCTC 2 cut(s) 332, 1023
Eco47I GGWCC 4 cut(s) 28, 235, 805, 853
Eco57I CTGAAG 3 cut(s) 629, 881, 1005
Eco91I GGTNACC 1 cut(s) 451
EcoO109I RGGNCCY 2 cut(s) 45, 853
EcoO65I GGTNACC 1 cut(s) 451
EcoRII CCWGG 4 cut(s) 60, 228, 635, 807
EcoT14I CCWWGG 2 cut(s) 526, 794
EcoT38I GRGCYC 2 cut(s) 49, 68
ErhI CCWWGG 2 cut(s) 526, 794
Esp3I CGTCTC 1 cut(s) 544
FaeI CATG 9 cut(s) 226, 380, 430, 466, 817, 827, 868, 893, 974
FatI CATG 9 cut(s) 222, 376, 426, 462, 813, 823, 864, 889, 970
FauI CCCGC 3 cut(s) 35, 75, 915
Fnu4HI GCNGC 2 cut(s) 55, 1026
FokI GGATG 2 cut(s) 328, 381
FriOI GRGCYC 2 cut(s) 49, 68
Fsp4HI GCNGC 2 cut(s) 55, 1026
FspBI CTAG 3 cut(s) 680, 782, 857
GlaI GCGC 2 cut(s) 77, 133
GluI GCNGC 2 cut(s) 55, 1026
HaeII RGCGCY 1 cut(s) 79
HaeIII GGCC 4 cut(s) 47, 66, 82, 205
HapII CCGG 6 cut(s) 79, 84, 100, 113, 206, 238
HgaI GACGC 1 cut(s) 1116
HhaI GCGC 2 cut(s) 78, 134
Hin1II CATG 9 cut(s) 226, 380, 430, 466, 817, 827, 868, 893, 974
Hin6I GCGC 2 cut(s) 76, 132
HinP1I GCGC 2 cut(s) 76, 132
HincII GTYRAC 1 cut(s) 932
HindII GTYRAC 1 cut(s) 932
HindIII AAGCTT 1 cut(s) 8
HinfI GANTC 1 cut(s) 950
HpaII CCGG 6 cut(s) 79, 84, 100, 113, 206, 238
HphI GGTGA 3 cut(s) 628, 829, 898
Hpy166II GTNNAC 2 cut(s) 28, 932
Hpy188I TCNGA 5 cut(s) 175, 648, 900, 1033, 1093
Hpy188III TCNNGA 4 cut(s) 337, 668, 777, 872
Hpy8I GTNNAC 2 cut(s) 28, 932
Hpy99I CGWCG 1 cut(s) 407
HpyAV CCTTC 1 cut(s) 527
HpyCH4III ACNGT 3 cut(s) 334, 1052, 1114
HpyCH4IV ACGT 2 cut(s) 518, 553
HpyCH4V TGCA 8 cut(s) 18, 372, 439, 466, 578, 1028, 1063, 1133
HpyF10VI GCNNNNNNNGC 3 cut(s) 63, 84, 191
HpyF3I CTNAG 4 cut(s) 242, 701, 910, 1070
HpySE526I ACGT 2 cut(s) 518, 553
Hsp92II CATG 9 cut(s) 226, 380, 430, 466, 817, 827, 868, 893, 974
HspAI GCGC 2 cut(s) 76, 132
KroI GCCGGC 1 cut(s) 78
KroNI GCCGGC 1 cut(s) 80
Kzo9I GATC 1 cut(s) 760
LguI GCTCTTC 1 cut(s) 592
LmnI GCTCC 6 cut(s) 115, 182, 252, 300, 673, 694
Lsp1109I GCAGC 2 cut(s) 41, 1012
LweI GCATC 5 cut(s) 359, 448, 685, 1037, 1072
MaeI CTAG 3 cut(s) 680, 782, 857
MaeII ACGT 2 cut(s) 518, 553
MaeIII GTNAC 4 cut(s) 354, 451, 652, 835
MalI GATC 1 cut(s) 762
MbiI CCGCTC 3 cut(s) 185, 458, 803
MboI GATC 1 cut(s) 760
MboII GAAGA 5 cut(s) 157, 549, 609, 751, 770
MflI RGATCY 1 cut(s) 760
MhlI GDGCHC 2 cut(s) 49, 68
MluCI AATT 5 cut(s) 434, 540, 744, 990, 1055
MmeI TCCRAC 2 cut(s) 153, 346
MroNI GCCGGC 1 cut(s) 78
MseI TTAA 1 cut(s) 828
MslI CAYNNNNRTG 1 cut(s) 425
MspI CCGG 6 cut(s) 79, 84, 100, 113, 206, 238
MspR9I CCNGG 6 cut(s) 62, 84, 207, 230, 637, 809
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 4 cut(s) 62, 230, 637, 809
MvnI CGCG 2 cut(s) 134, 669
MwoI GCNNNNNNNGC 3 cut(s) 63, 84, 191
NaeI GCCGGC 1 cut(s) 80
NciI CCSGG 2 cut(s) 84, 207
NdeII GATC 1 cut(s) 760
NgoMIV GCCGGC 1 cut(s) 78
NlaIII CATG 9 cut(s) 226, 380, 430, 466, 817, 827, 868, 893, 974
NlaIV GGNNCC 5 cut(s) 46, 47, 66, 524, 854
NmeAIII GCCGAG 1 cut(s) 793
NmuCI GTSAC 2 cut(s) 652, 835
NruI TCGCGA 1 cut(s) 669
NspI RCATGY 4 cut(s) 466, 827, 868, 974
NspV TTCGAA 1 cut(s) 1001
PaeI GCATGC 2 cut(s) 466, 868
PciI ACATGT 1 cut(s) 970
PciSI GCTCTTC 1 cut(s) 592
PcsI WCGNNNNNNNCGW 1 cut(s) 125
PctI GAATGC 1 cut(s) 985
PdiI GCCGGC 1 cut(s) 80
PfeI GAWTC 1 cut(s) 950
PkrI GCNGC 2 cut(s) 56, 1027
PpuMI RGGWCCY 1 cut(s) 853
PscI ACATGT 1 cut(s) 970
PshAI GACNNNNGTC 1 cut(s) 1050
Psp5II RGGWCCY 1 cut(s) 853
Psp6I CCWGG 4 cut(s) 60, 228, 635, 807
PspEI GGTNACC 1 cut(s) 451
PspGI CCWGG 4 cut(s) 60, 228, 635, 807
PspN4I GGNNCC 5 cut(s) 46, 47, 66, 524, 854
PspOMI GGGCCC 2 cut(s) 45, 64
PspPPI RGGWCCY 1 cut(s) 853
PsuI RGATCY 1 cut(s) 760
RruI TCGCGA 1 cut(s) 669
RseI CAYNNNNRTG 1 cut(s) 425
Rsr2I CGGWCCG 1 cut(s) 235
RsrII CGGWCCG 1 cut(s) 235
SapI GCTCTTC 1 cut(s) 592
SaqAI TTAA 1 cut(s) 828
SatI GCNGC 2 cut(s) 55, 1026
Sau3AI GATC 1 cut(s) 760
ScrFI CCNGG 6 cut(s) 62, 84, 207, 230, 637, 809
SduI GDGCHC 2 cut(s) 49, 68
SfaNI GCATC 5 cut(s) 359, 448, 685, 1037, 1072
SfuI TTCGAA 1 cut(s) 1001
SinI GGWCC 4 cut(s) 28, 235, 805, 853
SmiMI CAYNNNNRTG 1 cut(s) 425
SmlI CTYRAG 2 cut(s) 381, 870
SmoI CTYRAG 2 cut(s) 381, 870
SphI GCATGC 2 cut(s) 466, 868
Sse9I AATT 5 cut(s) 434, 540, 744, 990, 1055
SspMI CTAG 3 cut(s) 680, 782, 857
StyD4I CCNGG 6 cut(s) 60, 82, 205, 228, 635, 807
StyI CCWWGG 2 cut(s) 526, 794
TaaI ACNGT 3 cut(s) 334, 1052, 1114
TaiI ACGT 2 cut(s) 521, 556
TaqI TCGA 4 cut(s) 216, 336, 1001, 1039
TasI AATT 5 cut(s) 434, 540, 744, 990, 1055
TfiI GAWTC 1 cut(s) 950
Tru1I TTAA 1 cut(s) 828
Tru9I TTAA 1 cut(s) 828
TscAI CASTG 2 cut(s) 661, 1119
TseFI GTSAC 2 cut(s) 652, 835
TseI GCWGC 2 cut(s) 54, 1025
Tsp45I GTSAC 2 cut(s) 652, 835
TspDTI ATGAA 5 cut(s) 20, 332, 638, 830, 906
TspGWI ACGGA 1 cut(s) 117
TspRI CASTG 2 cut(s) 661, 1119
VpaK11BI GGWCC 4 cut(s) 28, 235, 805, 853
XceI RCATGY 4 cut(s) 466, 827, 868, 974
XspI CTAG 3 cut(s) 680, 782, 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.