MD05G1172000.v1.1

Plays an essential role in chain termination during de novo fatty acid synthesis

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
30078988 .. 30082280
3293 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1172000.v1.1.491

Sequence Viewer

Length: 1140 bp
ATGTTGAAGCTCTCGACATACAATGGAGTGGACCAAATTCACGGCGTGGCGGCCCAATGCCGCTTCCTTGGCCCACCCAAGCCCAACCCAATTTTCCCCCGCCGGAAAGACGGCGCCTTTCTTGCCCGCTGCGCTGCCTCACCTTCCAAAACGCCGGTTCTCGCCGTCGTATCGGACCGGGGGCCCGGGAGCTTGGCGGGTCGGGTCGAAACGAATACCGGGCCGGTCACCCTCGCGGACCGGCTGAGGCAGGGGAGCATGGCGGAGGACGGGAAGTCCTATAAGGAGTGCTTTATAGTGAGGTGCTATGAGGTCGGGATTAACAAGACTGCCACCGTCGAGACGATTGCCAATCTCTTGCAGGAGGTAGGATGCAACCATGCTCAAGCTGTTGGCTTTTCTACTGACGGATTTGCGACCACAACCACCATGAGAAAAATGCATCTCATTTGGGTTACTGCTCGCATGCATATTGAAATCTACAAATATCCAGCTTGGAGTGATGTCGTTGAAATAGAAACATGGTGCCAAGGGGAAGGGAGAATTGGCACTAGGCGTGATTGGATACTCAAGGACTATGCCACCGGTGAAGTCATTGGAAGAGCGACGAGCAAGTGGGTGATGATGAACCAAGACACTAGGCGACTTGTGAAAGTCACCGATGATGTTAGGGAAGAGCATTTAGTTTTTGCTCCACGAGAACTGAGATTAGCATTTCCAGAGCCAAACAATAGTAGCTTAAAGAAAATCTCCAAACTTGAAGATCCTGCTCAGTATTCTACACTGGGACTTGTGCCAAGGAGAGCAGATCTCGACATGAACCAGCATGTTAATAATGTCGCCTATATCGGATGGGTTCTAGAGAGCATGCCTCAAGAACTCATCGATAGCCATGAACTGCAAACAATCACCTTAGATTACAGGCGGGAGTGTCAACAGGATGACATAGTCAATTCCCTTACTAGTGTTGAACCTTTAGACGATGCTCCAGCTCTTTCAGGTAACGGAACAAATGGATCCCCTACTGCAACAGAAGATGATAAGGACTACCGTCAGTATTTGCATCTACTAAGATTAGCAGGCGATGGTTCGGAAATAAACCGGGGACGAACTATCTGGAGAGAAAAACCTGCAAGATGA

Protein Analysis

380

Amino Acids

42.4

Weight (kDa)

6.47

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl-ACP_TE PF01643 91 - 226 3.7e-44 Acyl-ACP thioesterase N-terminal domain
Acyl-ACP_TE_C PF20791 255 - 375 5.6e-26 Acyl-ACP thioesterase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25110
fragaria_vesca FvH4_2g18600
malus_domestica MD02G1127500.v1.1 MD05G1172000.v1.1
prunus_persica Prupe.8G199400_v2.0.a1
pyrus_communis pycom02g09960 pycom05g15870
rosa_chinensis RchiOBHm_Chr6g0284171
rosa_laevigata RLG00000012762
rosa_multiflora Rmu_sc0003778.1_g000013
rosa_roxburghii Rroxscaffold_7G00184830
rosa_rugosa Rorug06G0161500
rosa_samantha Rh6BG274800 Rh6DG269200
rosa_wichuraiana Rw6G023590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 113, 525
AccII CGCG 1 cut(s) 236
AciI CCGC 8 cut(s) 50, 61, 100, 127, 197, 236, 263, 925
AclWI GGATC 3 cut(s) 758, 1011, 1024
AcsI RAATTY 1 cut(s) 36
AcyI GRCGYC 1 cut(s) 114
AdeI CACNNNGTG 1 cut(s) 46
AgeI ACCGGT 1 cut(s) 584
AgsI TTSAA 5 cut(s) 7, 476, 512, 761, 971
AhdI GACNNNNNGTC 1 cut(s) 274
AhlI ACTAGT 1 cut(s) 962
AjuI GAANNNNNNNTTGG 4 cut(s) 77, 109, 528, 560
AluBI AGCT 6 cut(s) 10, 192, 389, 494, 738, 992
AluI AGCT 6 cut(s) 10, 192, 389, 494, 738, 992
Alw26I GTCTC 1 cut(s) 335
AlwI GGATC 3 cut(s) 758, 1011, 1024
Ama87I CYCGRG 1 cut(s) 185
AoxI GGCC 4 cut(s) 51, 70, 182, 221
ApaI GGGCCC 1 cut(s) 186
ApeKI GCWGC 2 cut(s) 129, 134
ApoI RAATTY 1 cut(s) 36
AsiGI ACCGGT 1 cut(s) 584
AspLEI GCGC 2 cut(s) 116, 134
AspS9I GGNCC 8 cut(s) 31, 52, 71, 175, 182, 183, 221, 238
AsuC2I CCSGG 5 cut(s) 179, 186, 187, 220, 1103
AsuHPI GGTGA 6 cut(s) 132, 220, 599, 631, 649, 901
AvaI CYCGRG 1 cut(s) 185
AvaII GGWCC 3 cut(s) 31, 175, 238
BaeGI GKGCMC 1 cut(s) 186
BamHI GGATCC 1 cut(s) 1016
BanI GGYRCC 2 cut(s) 113, 525
BanII GRGCYC 1 cut(s) 186
BauI CACGAG 1 cut(s) 696
BbvCI CCTCAGC 1 cut(s) 245
BbvI GCAGC 2 cut(s) 116, 121
BccI CCATC 2 cut(s) 846, 1079
BceAI ACGGC 3 cut(s) 58, 127, 149
BcgI CGANNNNNNTGC 2 cut(s) 329, 363
BciVI GTATCC 1 cut(s) 558
BcnI CCSGG 5 cut(s) 179, 186, 187, 220, 1103
BcoDI GTCTC 1 cut(s) 335
BcuI ACTAGT 1 cut(s) 962
BfaI CTAG 4 cut(s) 552, 639, 860, 963
BfoI RGCGCY 1 cut(s) 117
BfuI GTATCC 1 cut(s) 558
BglII AGATCT 1 cut(s) 808
BisI GCNGC 4 cut(s) 51, 61, 130, 135
BlsI GCNGC 4 cut(s) 52, 62, 131, 136
Bme1390I CCNGG 5 cut(s) 179, 186, 187, 220, 1103
Bme18I GGWCC 3 cut(s) 31, 175, 238
BmeRI GACNNNNNGTC 1 cut(s) 274
BmeT110I CYCGRG 1 cut(s) 185
BmgT120I GGNCC 8 cut(s) 31, 52, 71, 175, 182, 183, 221, 238
BmiI GGNNCC 5 cut(s) 115, 183, 184, 527, 1018
BmrFI CCNGG 5 cut(s) 179, 186, 187, 220, 1103
BmrI ACTGGG 1 cut(s) 794
BmsI GCATC 4 cut(s) 362, 451, 973, 1072
BmuI ACTGGG 1 cut(s) 794
BoxI GACNNNNGTC 1 cut(s) 1050
BplI GAGNNNNNCTC 4 cut(s) 795, 827, 856, 888
BpmI CTGGAG 2 cut(s) 972, 1138
Bpu10I CCTNAGC 1 cut(s) 245
BpuEI CTTGAG 3 cut(s) 369, 554, 858
BpuMI CCSGG 5 cut(s) 179, 186, 187, 220, 1103
Bsa29I ATCGAT 1 cut(s) 885
BsaHI GRCGYC 1 cut(s) 114
BsaJI CCNNGG 6 cut(s) 67, 178, 185, 529, 797, 1102
BsaWI WCCGGW 1 cut(s) 584
Bse118I RCCGGY 4 cut(s) 154, 223, 240, 584
Bse1I ACTGG 1 cut(s) 789
BseCI ATCGAT 1 cut(s) 885
BseDI CCNNGG 6 cut(s) 67, 178, 185, 529, 797, 1102
BseGI GGATG 3 cut(s) 377, 857, 946
BseMII CTCAG 3 cut(s) 236, 695, 785
BseNI ACTGG 1 cut(s) 789
BseSI GKGCMC 1 cut(s) 186
BseXI GCAGC 2 cut(s) 116, 121
Bsh1236I CGCG 1 cut(s) 236
BshFI GGCC 4 cut(s) 53, 72, 184, 223
BshNI GGYRCC 2 cut(s) 113, 525
BshTI ACCGGT 1 cut(s) 584
BshVI ATCGAT 1 cut(s) 885
BsiHKCI CYCGRG 1 cut(s) 185
BsiSI CCGG 9 cut(s) 103, 155, 178, 186, 219, 224, 241, 585, 1102
BslFI GGGAC 2 cut(s) 801, 1119
BsmAI GTCTC 1 cut(s) 335
BsmBI CGTCTC 1 cut(s) 335
BsmFI GGGAC 2 cut(s) 801, 1119
BsnI GGCC 4 cut(s) 53, 72, 184, 223
BsoBI CYCGRG 1 cut(s) 185
Bsp120I GGGCCC 1 cut(s) 182
Bsp1286I GDGCHC 1 cut(s) 186
Bsp143I GATC 3 cut(s) 763, 808, 1016
BspACI CCGC 8 cut(s) 50, 61, 100, 127, 197, 236, 263, 925
BspANI GGCC 4 cut(s) 53, 72, 184, 223
BspCNI CTCAG 3 cut(s) 237, 696, 784
BspDI ATCGAT 1 cut(s) 885
BspFNI CGCG 1 cut(s) 236
BspLI GGNNCC 5 cut(s) 115, 183, 184, 527, 1018
BspPI GGATC 3 cut(s) 758, 1011, 1024
BspQI GCTCTTC 2 cut(s) 595, 669
BspT107I GGYRCC 2 cut(s) 113, 525
BsrFI RCCGGY 4 cut(s) 154, 223, 240, 584
BsrI ACTGG 1 cut(s) 789
BssAI RCCGGY 4 cut(s) 154, 223, 240, 584
BssECI CCNNGG 6 cut(s) 67, 178, 185, 529, 797, 1102
BssMI GATC 3 cut(s) 763, 808, 1016
BssNI GRCGYC 1 cut(s) 114
BssSI CACGAG 1 cut(s) 696
BssT1I CCWWGG 3 cut(s) 67, 529, 797
Bst2BI CACGAG 1 cut(s) 696
Bst4CI ACNGT 2 cut(s) 337, 1052
Bst6I CTCTTC 2 cut(s) 595, 669
BstACI GRCGYC 1 cut(s) 114
BstC8I GCNNGC 5 cut(s) 127, 463, 467, 869, 1081
BstDEI CTNAG 5 cut(s) 245, 704, 771, 913, 1070
BstEII GGTNACC 1 cut(s) 226
BstF5I GGATG 3 cut(s) 377, 857, 946
BstFNI CGCG 1 cut(s) 236
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 2 cut(s) 116, 134
BstKTI GATC 3 cut(s) 766, 811, 1019
BstMAI GTCTC 1 cut(s) 335
BstMBI GATC 3 cut(s) 763, 808, 1016
BstMWI GCNNNNNNNGC 3 cut(s) 69, 122, 131
BstNSI RCATGY 3 cut(s) 469, 830, 871
BstPAI GACNNNNGTC 1 cut(s) 1050
BstPI GGTNACC 1 cut(s) 226
BstSCI CCNGG 5 cut(s) 177, 184, 185, 218, 1101
BstSLI GKGCMC 1 cut(s) 186
BstUI CGCG 1 cut(s) 236
BstV1I GCAGC 2 cut(s) 116, 121
BstX2I RGATCY 3 cut(s) 763, 808, 1016
BstYI RGATCY 3 cut(s) 763, 808, 1016
Bsu15I ATCGAT 1 cut(s) 885
BsuI GTATCC 1 cut(s) 558
BsuRI GGCC 4 cut(s) 53, 72, 184, 223
BsuTUI ATCGAT 1 cut(s) 885
BtgZI GCGATG 1 cut(s) 1098
BtsCI GGATG 3 cut(s) 377, 857, 946
BtsIMutI CAGTG 1 cut(s) 782
Cac8I GCNNGC 5 cut(s) 127, 463, 467, 869, 1081
CfoI GCGC 2 cut(s) 116, 134
Cfr10I RCCGGY 4 cut(s) 154, 223, 240, 584
Cfr13I GGNCC 8 cut(s) 31, 52, 71, 175, 182, 183, 221, 238
Cfr9I CCCGGG 1 cut(s) 185
ClaI ATCGAT 1 cut(s) 885
CpoI CGGWCCG 2 cut(s) 175, 238
CspAI ACCGGT 1 cut(s) 584
CspI CGGWCCG 2 cut(s) 175, 238
CviAII CATG 9 cut(s) 259, 380, 430, 466, 522, 817, 827, 868, 893
DdeI CTNAG 5 cut(s) 245, 704, 771, 913, 1070
DinI GGCGCC 1 cut(s) 115
DpnI GATC 3 cut(s) 765, 810, 1018
DpnII GATC 3 cut(s) 763, 808, 1016
DraIII CACNNNGTG 1 cut(s) 46
DriI GACNNNNNGTC 1 cut(s) 274
Eam1104I CTCTTC 2 cut(s) 595, 669
Eam1105I GACNNNNNGTC 1 cut(s) 274
EarI CTCTTC 2 cut(s) 595, 669
EciI GGCGGA 1 cut(s) 278
Eco130I CCWWGG 3 cut(s) 67, 529, 797
Eco24I GRGCYC 1 cut(s) 186
Eco47I GGWCC 3 cut(s) 31, 175, 238
Eco88I CYCGRG 1 cut(s) 185
Eco91I GGTNACC 1 cut(s) 226
EcoO109I RGGNCCY 1 cut(s) 182
EcoO65I GGTNACC 1 cut(s) 226
EcoT14I CCWWGG 3 cut(s) 67, 529, 797
EcoT22I ATGCAT 2 cut(s) 444, 471
EcoT38I GRGCYC 1 cut(s) 186
EgeI GGCGCC 1 cut(s) 115
EheI GGCGCC 1 cut(s) 115
ErhI CCWWGG 3 cut(s) 67, 529, 797
Esp3I CGTCTC 1 cut(s) 335
FaeI CATG 9 cut(s) 262, 383, 433, 469, 525, 820, 830, 871, 896
FalI AAGNNNNNCTT 2 cut(s) 275, 307
FaqI GGGAC 2 cut(s) 801, 1119
FatI CATG 9 cut(s) 258, 379, 429, 465, 521, 816, 826, 867, 892
FauI CCCGC 4 cut(s) 107, 134, 190, 918
Fnu4HI GCNGC 4 cut(s) 51, 61, 130, 135
FokI GGATG 3 cut(s) 384, 864, 953
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 4 cut(s) 51, 61, 130, 135
FspBI CTAG 4 cut(s) 552, 639, 860, 963
GlaI GCGC 2 cut(s) 115, 133
GluI GCNGC 4 cut(s) 51, 61, 130, 135
GsuI CTGGAG 2 cut(s) 972, 1138
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 4 cut(s) 53, 72, 184, 223
HapII CCGG 9 cut(s) 103, 155, 178, 186, 219, 224, 241, 585, 1102
HhaI GCGC 2 cut(s) 116, 134
Hin1I GRCGYC 1 cut(s) 114
Hin1II CATG 9 cut(s) 262, 383, 433, 469, 525, 820, 830, 871, 896
Hin6I GCGC 2 cut(s) 114, 132
HinP1I GCGC 2 cut(s) 114, 132
HincII GTYRAC 1 cut(s) 935
HindII GTYRAC 1 cut(s) 935
HpaII CCGG 9 cut(s) 103, 155, 178, 186, 219, 224, 241, 585, 1102
HphI GGTGA 6 cut(s) 132, 220, 599, 631, 649, 901
Hpy166II GTNNAC 2 cut(s) 31, 935
Hpy188I TCNGA 3 cut(s) 175, 851, 1093
Hpy188III TCNNGA 8 cut(s) 13, 316, 340, 719, 812, 860, 875, 1117
Hpy8I GTNNAC 2 cut(s) 31, 935
Hpy99I CGWCG 3 cut(s) 170, 341, 610
HpyAV CCTTC 2 cut(s) 153, 530
HpyCH4III ACNGT 2 cut(s) 337, 1052
HpyCH4V TGCA 8 cut(s) 361, 375, 442, 469, 901, 1028, 1063, 1133
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 122, 131
HpyF3I CTNAG 5 cut(s) 245, 704, 771, 913, 1070
Hsp92I GRCGYC 1 cut(s) 114
Hsp92II CATG 9 cut(s) 262, 383, 433, 469, 525, 820, 830, 871, 896
HspAI GCGC 2 cut(s) 114, 132
KasI GGCGCC 1 cut(s) 113
Kzo9I GATC 3 cut(s) 763, 808, 1016
LguI GCTCTTC 2 cut(s) 595, 669
LmnI GCTCC 4 cut(s) 189, 255, 697, 991
Lsp1109I GCAGC 2 cut(s) 116, 121
LweI GCATC 4 cut(s) 362, 451, 973, 1072
MaeI CTAG 4 cut(s) 552, 639, 860, 963
MaeIII GTNAC 4 cut(s) 226, 454, 655, 1001
MalI GATC 3 cut(s) 765, 810, 1018
MboI GATC 3 cut(s) 763, 808, 1016
MboII GAAGA 4 cut(s) 612, 686, 773, 1046
MflI RGATCY 3 cut(s) 763, 808, 1016
MhlI GDGCHC 1 cut(s) 186
MluCI AATT 4 cut(s) 36, 90, 543, 952
Mly113I GGCGCC 1 cut(s) 114
MnlI CCTC 8 cut(s) 148, 240, 242, 259, 294, 304, 358, 882
Mph1103I ATGCAT 2 cut(s) 444, 471
MseI TTAA 3 cut(s) 321, 740, 831
MspA1I CMGCKG 1 cut(s) 129
MspI CCGG 9 cut(s) 103, 155, 178, 186, 219, 224, 241, 585, 1102
MspR9I CCNGG 5 cut(s) 179, 186, 187, 220, 1103
MvnI CGCG 1 cut(s) 236
MwoI GCNNNNNNNGC 3 cut(s) 69, 122, 131
NarI GGCGCC 1 cut(s) 114
NciI CCSGG 5 cut(s) 179, 186, 187, 220, 1103
NdeII GATC 3 cut(s) 763, 808, 1016
NlaIII CATG 9 cut(s) 262, 383, 433, 469, 525, 820, 830, 871, 896
NlaIV GGNNCC 5 cut(s) 115, 183, 184, 527, 1018
NmuCI GTSAC 2 cut(s) 226, 655
NsiI ATGCAT 2 cut(s) 444, 471
NspI RCATGY 3 cut(s) 469, 830, 871
PaeI GCATGC 2 cut(s) 469, 871
PciSI GCTCTTC 2 cut(s) 595, 669
PflFI GACNNNGTC 1 cut(s) 947
PinAI ACCGGT 1 cut(s) 584
PkrI GCNGC 4 cut(s) 52, 62, 131, 136
PluTI GGCGCC 1 cut(s) 117
PshAI GACNNNNGTC 1 cut(s) 1050
PspEI GGTNACC 1 cut(s) 226
PspN4I GGNNCC 5 cut(s) 115, 183, 184, 527, 1018
PspOMI GGGCCC 1 cut(s) 182
PspPI GGNCC 8 cut(s) 31, 52, 71, 175, 182, 183, 221, 238
PsuI RGATCY 3 cut(s) 763, 808, 1016
PsyI GACNNNGTC 1 cut(s) 947
Rsr2I CGGWCCG 2 cut(s) 175, 238
RsrII CGGWCCG 2 cut(s) 175, 238
SapI GCTCTTC 2 cut(s) 595, 669
SaqAI TTAA 3 cut(s) 321, 740, 831
SatI GCNGC 4 cut(s) 51, 61, 130, 135
Sau3AI GATC 3 cut(s) 763, 808, 1016
Sau96I GGNCC 8 cut(s) 31, 52, 71, 175, 182, 183, 221, 238
ScrFI CCNGG 5 cut(s) 179, 186, 187, 220, 1103
SduI GDGCHC 1 cut(s) 186
SfaNI GCATC 4 cut(s) 362, 451, 973, 1072
SfoI GGCGCC 1 cut(s) 115
SgrAI CRCCGGYG 1 cut(s) 584
SinI GGWCC 3 cut(s) 31, 175, 238
SmaI CCCGGG 1 cut(s) 187
SmlI CTYRAG 3 cut(s) 384, 569, 873
SmoI CTYRAG 3 cut(s) 384, 569, 873
SpeI ACTAGT 1 cut(s) 962
SphI GCATGC 2 cut(s) 469, 871
Sse9I AATT 4 cut(s) 36, 90, 543, 952
SsiI CCGC 8 cut(s) 50, 61, 100, 127, 197, 236, 263, 925
SspDI GGCGCC 1 cut(s) 113
SspMI CTAG 4 cut(s) 552, 639, 860, 963
StyD4I CCNGG 5 cut(s) 177, 184, 185, 218, 1101
StyI CCWWGG 3 cut(s) 67, 529, 797
TaaI ACNGT 2 cut(s) 337, 1052
TaqI TCGA 5 cut(s) 14, 207, 339, 813, 885
TasI AATT 4 cut(s) 36, 90, 543, 952
TauI GCSGC 2 cut(s) 53, 63
Tru1I TTAA 3 cut(s) 321, 740, 831
Tru9I TTAA 3 cut(s) 321, 740, 831
TscAI CASTG 1 cut(s) 789
TseFI GTSAC 2 cut(s) 226, 655
TseI GCWGC 2 cut(s) 129, 134
Tsp45I GTSAC 2 cut(s) 226, 655
TspDTI ATGAA 3 cut(s) 641, 833, 909
TspGWI ACGGA 2 cut(s) 423, 1020
TspMI CCCGGG 1 cut(s) 185
TspRI CASTG 1 cut(s) 789
Tth111I GACNNNGTC 1 cut(s) 947
VpaK11BI GGWCC 3 cut(s) 31, 175, 238
XapI RAATTY 1 cut(s) 36
XbaI TCTAGA 1 cut(s) 859
XceI RCATGY 3 cut(s) 469, 830, 871
XmaI CCCGGG 1 cut(s) 185
XspI CTAG 4 cut(s) 552, 639, 860, 963
Zsp2I ATGCAT 2 cut(s) 444, 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.