Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0016026

Physical Location & Seq

Genomic Coordinates Forward (+)

18934154 .. 18937446

Gene Structure 3293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G199400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1146 bp

ATGTTGAAGCTCACAACGTACACTGGAGCGGACCAAATTCATGGCGTGGCCCAATGCCACTCCTTGGGCCCATCGAAACCCAACCCCACTTTCCCTCGCCGGAAAGACGGCATTTCTCTTGTGCCATGCACTTCTGCGCCTTCGAAAACGCCGGTGCTCGCCGTCGTTTCGGACCGGGGGGCCGGGAGTGTGCGCTCGGAGACTGGACCGGGTCGGGTCGAGCATTCGGTTAGCCTGGCGGACCGGTTGAGGCAGGGGAGCTTGGCGGAGGACGGGAAGTCATATAAGGAGTGCTTTATAGTGAGGTGCTATGAGGTTGGGATTAACAAGACTGCCACTGTTGAGACCATTGCCAATCTCTTGCAGGAGGTTGGATGCAACCACGCTCAAGTTGTTGGCTTTTCAACTGATGGTTTTGCGACCACCACCACCATGAGGAAAATGCATCTCATATGGGTTACTGCTCGCATGCATATTGAAATCTACAAATATCCAGCTTGGAGTGATGTTGTTGAAATAGAAACATGGTGCCAAGGGGAAGGGAGAATTGGTACTAGACGTGATTGGATAATGAAGGACTATGCCACTGGTCAAGTCATTGGAAGAGCAACAAGTAAGTGGGTGATGATGAACCAAGACACTAGGCGACTTCAGAAAGTCAGTGATGATGTTCGGGAAGAGCATTTAGTATTTGCTCCACGAGAACTGAGGTTAGCCTTTCCAGAGCCTAACAATAGTAGCTTGAGGAAAATAGCTAAACTGGAAGATCCTGCTCCATATTCCAGACTGGGACTTGTGCCAAGGAGAGCAGATCTGGACATGAACCAGCATGTTAATAATGTCGCCTACATCGGATGGGTTCTAGAGAGCATGCCTCAAGAAATCATTGATGGCTATGAACTGCAAACAATCACCTTAGATTACAGGCGGGAGTGTCAACGGGATGACATAGTTGATTCCCTTACAAATGTGGAACCTTTAGAGGATGGTCCAGCTATTTCAGGCTTAGAAGGAACAAATGGATCTCCTGCTGCAACAGAAGATACAAAGGACTATTGTCAGTTTTTGCATCTACTAAGATTATCAGGTGATGGTTCAGAAATAAACCGGGGACGAACTGTCTGGAGAGAAAAACCTGCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016297 GO:0016740 GO:0016746 GO:0016747 GO:0016787 GO:0016788 GO:0016790 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 map00061

Pfam Domains

Protein Families

Acyl-ACP_TE

Protein Analysis

382

Amino Acids

42.59

Weight (kDa)

6.34

Isoelectric Point (pI)

44.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016026)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25110
fragaria_vesca	FvH4_2g18600
malus_domestica	MD02G1127500.v1.1 MD05G1172000.v1.1
prunus_persica	Prupe.8G199400_v2.0.a1
pyrus_communis	pycom02g09960 pycom05g15870
rosa_chinensis	RchiOBHm_Chr6g0284171
rosa_laevigata	RLG00000012762
rosa_multiflora	Rmu_sc0003778.1_g000013
rosa_roxburghii	Rroxscaffold_7G00184830
rosa_rugosa	Rorug06G0161500
rosa_samantha	Rh6BG274800 Rh6DG269200
rosa_wichuraiana	Rw6G023590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	528
AccB7I	CCANNNNNTGG	1 cut(s)	64
AccBSI	CCGCTC	1 cut(s)	29
AciI	CCGC	4 cut(s)	29, 239, 266, 928
AclWI	GGATC	2 cut(s)	761, 1030
AcsI	RAATTY	1 cut(s)	36
AcuI	CTGAAG	1 cut(s)	635
AfaI	GTAC	2 cut(s)	20, 553
AfiI	CCNNNNNNNGG	2 cut(s)	64, 435
AgeI	ACCGGT	1 cut(s)	243
AgsI	TTSAA	4 cut(s)	7, 405, 479, 515
AhdI	GACNNNNNGTC	2 cut(s)	277, 1118
AjiI	CACGTC	1 cut(s)	560
AjnI	CCWGG	1 cut(s)	234
AjuI	GAANNNNNNNTTGG	4 cut(s)	74, 106, 531, 563
AluBI	AGCT	6 cut(s)	10, 261, 497, 741, 755, 995
AluI	AGCT	6 cut(s)	10, 261, 497, 741, 755, 995
Alw21I	GWGCWC	1 cut(s)	159
Alw26I	GTCTC	2 cut(s)	194, 338
AlwI	GGATC	2 cut(s)	761, 1030
AoxI	GGCC	3 cut(s)	48, 67, 180
ApaI	GGGCCC	1 cut(s)	71
ApeKI	GCWGC	1 cut(s)	1031
ApoI	RAATTY	1 cut(s)	36
AsiGI	ACCGGT	1 cut(s)	243
AspLEI	GCGC	2 cut(s)	139, 195
AspS9I	GGNCC	9 cut(s)	31, 49, 67, 68, 172, 180, 206, 241, 989
AsuC2I	CCSGG	4 cut(s)	176, 184, 210, 1109
AsuHPI	GGTGA	3 cut(s)	634, 904, 1100
AsuII	TTCGAA	1 cut(s)	143
AvaII	GGWCC	5 cut(s)	31, 172, 206, 241, 989
BaeGI	GKGCMC	1 cut(s)	71
BanI	GGYRCC	1 cut(s)	528
BanII	GRGCYC	1 cut(s)	71
BauI	CACGAG	1 cut(s)	699
Bbv12I	GWGCWC	1 cut(s)	159
BbvI	GCAGC	1 cut(s)	1018
BccI	CCATC	6 cut(s)	79, 404, 849, 884, 980, 1085
BceAI	ACGGC	2 cut(s)	124, 146
BciT130I	CCWGG	1 cut(s)	236
BcnI	CCSGG	4 cut(s)	176, 184, 210, 1109
BcoDI	GTCTC	2 cut(s)	194, 338
BfaI	CTAG	3 cut(s)	555, 642, 863
BglII	AGATCT	1 cut(s)	811
BisI	GCNGC	1 cut(s)	1032
BlsI	GCNGC	1 cut(s)	1033
Bme1390I	CCNGG	5 cut(s)	176, 184, 210, 236, 1109
Bme18I	GGWCC	5 cut(s)	31, 172, 206, 241, 989
BmeRI	GACNNNNNGTC	2 cut(s)	277, 1118
BmgBI	CACGTC	1 cut(s)	560
BmgT120I	GGNCC	9 cut(s)	31, 49, 67, 68, 172, 180, 206, 241, 989
BmiI	GGNNCC	4 cut(s)	69, 181, 530, 975
BmrFI	CCNGG	5 cut(s)	176, 184, 210, 236, 1109
BmrI	ACTGGG	1 cut(s)	797
BmsI	GCATC	3 cut(s)	365, 454, 1078
BmuI	ACTGGG	1 cut(s)	797
BoxI	GACNNNNGTC	1 cut(s)	1056
BplI	GAGNNNNNCTC	2 cut(s)	859, 891
BpmI	CTGGAG	2 cut(s)	45, 1144
Bpu14I	TTCGAA	1 cut(s)	143
BpuEI	CTTGAG	3 cut(s)	372, 763, 861
BpuMI	CCSGG	4 cut(s)	176, 184, 210, 1109
BsaI	GGTCTC	1 cut(s)	338
BsaJI	CCNNGG	5 cut(s)	63, 175, 532, 800, 1108
BsaWI	WCCGGW	1 cut(s)	243
BsaXI	ACNNNNNCTCC	2 cut(s)	535, 565
Bsc4I	CCNNNNNNNGG	2 cut(s)	64, 435
Bse118I	RCCGGY	2 cut(s)	151, 243
Bse1I	ACTGG	5 cut(s)	28, 208, 592, 765, 792
Bse3DI	GCAATG	1 cut(s)	348
BseBI	CCWGG	1 cut(s)	236
BseDI	CCNNGG	5 cut(s)	63, 175, 532, 800, 1108
BseGI	GGATG	4 cut(s)	380, 860, 949, 991
BseLI	CCNNNNNNNGG	2 cut(s)	64, 435
BseMI	GCAATG	1 cut(s)	348
BseMII	CTCAG	1 cut(s)	698
BseNI	ACTGG	5 cut(s)	28, 208, 592, 765, 792
BseSI	GKGCMC	1 cut(s)	71
BseXI	GCAGC	1 cut(s)	1018
BshFI	GGCC	3 cut(s)	50, 69, 182
BshNI	GGYRCC	1 cut(s)	528
BshTI	ACCGGT	1 cut(s)	243
BsiHKAI	GWGCWC	1 cut(s)	159
BsiSI	CCGG	7 cut(s)	100, 152, 175, 183, 209, 244, 1108
BslFI	GGGAC	2 cut(s)	804, 1125
BslI	CCNNNNNNNGG	2 cut(s)	64, 435
BsmAI	GTCTC	2 cut(s)	194, 338
BsmFI	GGGAC	2 cut(s)	804, 1125
BsmI	GAATGC	1 cut(s)	223
BsnI	GGCC	3 cut(s)	50, 69, 182
Bso31I	GGTCTC	1 cut(s)	338
Bsp119I	TTCGAA	1 cut(s)	143
Bsp120I	GGGCCC	1 cut(s)	67
Bsp1286I	GDGCHC	2 cut(s)	71, 159
Bsp143I	GATC	3 cut(s)	766, 811, 1022
BspACI	CCGC	4 cut(s)	29, 239, 266, 928
BspANI	GGCC	3 cut(s)	50, 69, 182
BspCNI	CTCAG	1 cut(s)	699
BspLI	GGNNCC	4 cut(s)	69, 181, 530, 975
BspPI	GGATC	2 cut(s)	761, 1030
BspQI	GCTCTTC	2 cut(s)	598, 672
BspT104I	TTCGAA	1 cut(s)	143
BspT107I	GGYRCC	1 cut(s)	528
BspTNI	GGTCTC	1 cut(s)	338
BsrBI	CCGCTC	1 cut(s)	29
BsrDI	GCAATG	1 cut(s)	348
BsrFI	RCCGGY	2 cut(s)	151, 243
BsrI	ACTGG	5 cut(s)	28, 208, 592, 765, 792
BssAI	RCCGGY	2 cut(s)	151, 243
BssECI	CCNNGG	5 cut(s)	63, 175, 532, 800, 1108
BssMI	GATC	3 cut(s)	766, 811, 1022
BssSI	CACGAG	1 cut(s)	699
BssT1I	CCWWGG	3 cut(s)	63, 532, 800
Bst2BI	CACGAG	1 cut(s)	699
Bst2UI	CCWGG	1 cut(s)	236
Bst4CI	ACNGT	2 cut(s)	340, 1120
Bst6I	CTCTTC	2 cut(s)	598, 672
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	4 cut(s)	159, 466, 470, 872
BstDEI	CTNAG	4 cut(s)	707, 916, 1006, 1076
BstF5I	GGATG	4 cut(s)	380, 860, 949, 991
BstHHI	GCGC	2 cut(s)	139, 195
BstKTI	GATC	3 cut(s)	769, 814, 1025
BstMAI	GTCTC	2 cut(s)	194, 338
BstMBI	GATC	3 cut(s)	766, 811, 1022
BstNI	CCWGG	1 cut(s)	236
BstNSI	RCATGY	3 cut(s)	472, 833, 874
BstPAI	GACNNNNGTC	1 cut(s)	1056
BstSCI	CCNGG	5 cut(s)	174, 182, 208, 234, 1107
BstSLI	GKGCMC	1 cut(s)	71
BstV1I	GCAGC	1 cut(s)	1018
BstX2I	RGATCY	3 cut(s)	766, 811, 1022
BstXI	CCANNNNNNTGG	1 cut(s)	41
BstYI	RGATCY	3 cut(s)	766, 811, 1022
BsuRI	GGCC	3 cut(s)	50, 69, 182
BtrI	CACGTC	1 cut(s)	560
BtsCI	GGATG	4 cut(s)	380, 860, 949, 991
BtsIMutI	CAGTG	4 cut(s)	21, 336, 585, 667
Cac8I	GCNNGC	4 cut(s)	159, 466, 470, 872
CfoI	GCGC	2 cut(s)	139, 195
Cfr10I	RCCGGY	2 cut(s)	151, 243
Cfr13I	GGNCC	9 cut(s)	31, 49, 67, 68, 172, 180, 206, 241, 989
CpoI	CGGWCCG	2 cut(s)	172, 241
Csp6I	GTAC	2 cut(s)	19, 552
CspAI	ACCGGT	1 cut(s)	243
CspI	CGGWCCG	2 cut(s)	172, 241
CviAII	CATG	8 cut(s)	41, 126, 433, 469, 525, 820, 830, 871
CviQI	GTAC	2 cut(s)	19, 552
DdeI	CTNAG	4 cut(s)	707, 916, 1006, 1076
DpnI	GATC	3 cut(s)	768, 813, 1024
DpnII	GATC	3 cut(s)	766, 811, 1022
DriI	GACNNNNNGTC	2 cut(s)	277, 1118
Eam1104I	CTCTTC	2 cut(s)	598, 672
Eam1105I	GACNNNNNGTC	2 cut(s)	277, 1118
EarI	CTCTTC	2 cut(s)	598, 672
EciI	GGCGGA	2 cut(s)	254, 281
Eco130I	CCWWGG	3 cut(s)	63, 532, 800
Eco24I	GRGCYC	1 cut(s)	71
Eco31I	GGTCTC	1 cut(s)	338
Eco47I	GGWCC	5 cut(s)	31, 172, 206, 241, 989
Eco57I	CTGAAG	1 cut(s)	635
EcoRII	CCWGG	1 cut(s)	234
EcoT14I	CCWWGG	3 cut(s)	63, 532, 800
EcoT22I	ATGCAT	2 cut(s)	447, 474
EcoT38I	GRGCYC	1 cut(s)	71
ErhI	CCWWGG	3 cut(s)	63, 532, 800
FaeI	CATG	8 cut(s)	44, 129, 436, 472, 528, 823, 833, 874
FalI	AAGNNNNNCTT	2 cut(s)	278, 310
FaqI	GGGAC	2 cut(s)	804, 1125
FatI	CATG	8 cut(s)	40, 125, 432, 468, 524, 819, 829, 870
FauI	CCCGC	1 cut(s)	921
FauNDI	CATATG	1 cut(s)	452
Fnu4HI	GCNGC	1 cut(s)	1032
FokI	GGATG	4 cut(s)	387, 867, 956, 998
FriOI	GRGCYC	1 cut(s)	71
Fsp4HI	GCNGC	1 cut(s)	1032
FspBI	CTAG	3 cut(s)	555, 642, 863
GlaI	GCGC	2 cut(s)	138, 194
GluI	GCNGC	1 cut(s)	1032
GsuI	CTGGAG	2 cut(s)	45, 1144
HaeIII	GGCC	3 cut(s)	50, 69, 182
HapII	CCGG	7 cut(s)	100, 152, 175, 183, 209, 244, 1108
HhaI	GCGC	2 cut(s)	139, 195
Hin1II	CATG	8 cut(s)	44, 129, 436, 472, 528, 823, 833, 874
Hin6I	GCGC	2 cut(s)	137, 193
HinP1I	GCGC	2 cut(s)	137, 193
HincII	GTYRAC	1 cut(s)	938
HindII	GTYRAC	1 cut(s)	938
HinfI	GANTC	1 cut(s)	956
HpaII	CCGG	7 cut(s)	100, 152, 175, 183, 209, 244, 1108
HphI	GGTGA	3 cut(s)	634, 904, 1100
Hpy166II	GTNNAC	2 cut(s)	21, 938
Hpy188I	TCNGA	5 cut(s)	172, 199, 654, 854, 1099
Hpy188III	TCNNGA	7 cut(s)	674, 722, 783, 815, 863, 878, 1123
Hpy8I	GTNNAC	2 cut(s)	21, 938
Hpy99I	CGWCG	1 cut(s)	167
HpyAV	CCTTC	4 cut(s)	150, 533, 568, 1004
HpyCH4III	ACNGT	2 cut(s)	340, 1120
HpyCH4IV	ACGT	2 cut(s)	17, 559
HpyCH4V	TGCA	9 cut(s)	129, 364, 378, 445, 472, 904, 1034, 1069, 1139
HpyF3I	CTNAG	4 cut(s)	707, 916, 1006, 1076
HpySE526I	ACGT	2 cut(s)	17, 559
Hsp92II	CATG	8 cut(s)	44, 129, 436, 472, 528, 823, 833, 874
HspAI	GCGC	2 cut(s)	137, 193
Kzo9I	GATC	3 cut(s)	766, 811, 1022
LguI	GCTCTTC	2 cut(s)	598, 672
LmnI	GCTCC	4 cut(s)	26, 258, 700, 778
Lsp1109I	GCAGC	1 cut(s)	1018
LweI	GCATC	3 cut(s)	365, 454, 1078
MaeI	CTAG	3 cut(s)	555, 642, 863
MaeII	ACGT	2 cut(s)	17, 559
MaeIII	GTNAC	1 cut(s)	457
MalI	GATC	3 cut(s)	768, 813, 1024
MbiI	CCGCTC	1 cut(s)	29
MboI	GATC	3 cut(s)	766, 811, 1022
MboII	GAAGA	4 cut(s)	615, 689, 776, 1052
MflI	RGATCY	3 cut(s)	766, 811, 1022
MhlI	GDGCHC	2 cut(s)	71, 159
MluCI	AATT	2 cut(s)	36, 546
MmeI	TCCRAC	1 cut(s)	352
Mph1103I	ATGCAT	2 cut(s)	447, 474
MseI	TTAA	2 cut(s)	324, 834
MslI	CAYNNNNRTG	1 cut(s)	431
MspI	CCGG	7 cut(s)	100, 152, 175, 183, 209, 244, 1108
MspR9I	CCNGG	5 cut(s)	176, 184, 210, 236, 1109
Mva1269I	GAATGC	1 cut(s)	223
MvaI	CCWGG	1 cut(s)	236
NciI	CCSGG	4 cut(s)	176, 184, 210, 1109
NdeI	CATATG	1 cut(s)	452
NdeII	GATC	3 cut(s)	766, 811, 1022
NlaIII	CATG	8 cut(s)	44, 129, 436, 472, 528, 823, 833, 874
NlaIV	GGNNCC	4 cut(s)	69, 181, 530, 975
NsiI	ATGCAT	2 cut(s)	447, 474
NspI	RCATGY	3 cut(s)	472, 833, 874
NspV	TTCGAA	1 cut(s)	143
PaeI	GCATGC	2 cut(s)	472, 874
PciSI	GCTCTTC	2 cut(s)	598, 672
PctI	GAATGC	1 cut(s)	223
PfeI	GAWTC	1 cut(s)	956
PflFI	GACNNNGTC	1 cut(s)	210
PflMI	CCANNNNNTGG	1 cut(s)	64
PinAI	ACCGGT	1 cut(s)	243
PkrI	GCNGC	1 cut(s)	1033
PshAI	GACNNNNGTC	1 cut(s)	1056
Psp6I	CCWGG	1 cut(s)	234
PspGI	CCWGG	1 cut(s)	234
PspN4I	GGNNCC	4 cut(s)	69, 181, 530, 975
PspOMI	GGGCCC	1 cut(s)	67
PspPI	GGNCC	9 cut(s)	31, 49, 67, 68, 172, 180, 206, 241, 989
PsuI	RGATCY	3 cut(s)	766, 811, 1022
PsyI	GACNNNGTC	1 cut(s)	210
RsaI	GTAC	2 cut(s)	20, 553
RsaNI	GTAC	2 cut(s)	19, 552
RseI	CAYNNNNRTG	1 cut(s)	431
Rsr2I	CGGWCCG	2 cut(s)	172, 241
RsrII	CGGWCCG	2 cut(s)	172, 241
SapI	GCTCTTC	2 cut(s)	598, 672
SaqAI	TTAA	2 cut(s)	324, 834
SatI	GCNGC	1 cut(s)	1032
Sau3AI	GATC	3 cut(s)	766, 811, 1022
Sau96I	GGNCC	9 cut(s)	31, 49, 67, 68, 172, 180, 206, 241, 989
ScrFI	CCNGG	5 cut(s)	176, 184, 210, 236, 1109
SduI	GDGCHC	2 cut(s)	71, 159
SfaNI	GCATC	3 cut(s)	365, 454, 1078
SfuI	TTCGAA	1 cut(s)	143
SgrAI	CRCCGGYG	1 cut(s)	151
SinI	GGWCC	5 cut(s)	31, 172, 206, 241, 989
SmiMI	CAYNNNNRTG	1 cut(s)	431
SmlI	CTYRAG	3 cut(s)	387, 742, 876
SmoI	CTYRAG	3 cut(s)	387, 742, 876
SphI	GCATGC	2 cut(s)	472, 874
Sse9I	AATT	2 cut(s)	36, 546
SsiI	CCGC	4 cut(s)	29, 239, 266, 928
SspMI	CTAG	3 cut(s)	555, 642, 863
StyD4I	CCNGG	5 cut(s)	174, 182, 208, 234, 1107
StyI	CCWWGG	3 cut(s)	63, 532, 800
TaaI	ACNGT	2 cut(s)	340, 1120
TaiI	ACGT	2 cut(s)	20, 562
TaqI	TCGA	3 cut(s)	74, 143, 219
TasI	AATT	2 cut(s)	36, 546
TfiI	GAWTC	1 cut(s)	956
Tru1I	TTAA	2 cut(s)	324, 834
Tru9I	TTAA	2 cut(s)	324, 834
TscAI	CASTG	4 cut(s)	28, 343, 592, 667
TseI	GCWGC	1 cut(s)	1031
TspDTI	ATGAA	5 cut(s)	29, 587, 644, 836, 912
TspRI	CASTG	4 cut(s)	28, 343, 592, 667
Tth111I	GACNNNGTC	1 cut(s)	210
Van91I	CCANNNNNTGG	1 cut(s)	64
VpaK11BI	GGWCC	5 cut(s)	31, 172, 206, 241, 989
XapI	RAATTY	1 cut(s)	36
XbaI	TCTAGA	1 cut(s)	862
XceI	RCATGY	3 cut(s)	472, 833, 874
XspI	CTAG	3 cut(s)	555, 642, 863
Zsp2I	ATGCAT	2 cut(s)	447, 474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.