FvH4_2g22920

domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
18800917 .. 18818350
17434 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g22920.t4

Sequence Viewer

Length: 10824 bp
ATGTTTCAGGGATCCAAAGGCGGTGGGAGAACGATGAAATGGGGAACATTGCTTAAGGACTTGAGAGAGAAGGTTGGGCTCACTAATTCACCTCCCTCTGCTTCAGCTTCTTCTTCTTCTCCTTCTCCTTCTGCTGCTGCAGCTTCTTCGGATGCTCTTTCTTCCTCCACCAATGCTCTCTCAGCTCTTCACGGCTCGTATTCTCCTTCAAGAGACAAACATGAACTGGAATTGGACTTCAAGAGATTTTGGGAAGAGTTCCGGTCTTCCAGCTCTGAAAAGGAGAAAGAAGCGGCCTTAAATTTGACTGTAGATGTTTTCTGTAGATTAGTGAAGCAGCATGCAAACGTAGCTCAGTTAGTTACTCTGTTAGTTGAAACACATATATTCTCGTTTGTGGTGGGAAGAGCATTTGTAACAGATATTGAGAAGTTAAAAATCAGCAGCAAAACAAGATGTTTGGATGTAGCAAAAGTATTGAAGTTTTTTTCGGAAATCACAAAGGATGGCATCAGTCCTGGTTCAAATATGTTGACAGCCATAGAAGTCCTTGTTTCAGGGCCTATTGATAAGCAATCTCTCCTTGATTCGGGGATATTATGCTGTCTCATTCACATTCTCAATGCCCTTCTGGATCCTGATGAAGCCATTCAACACCAAAAAGCTGCTGGTCATGAAGAACCATTTCTTTCTGAGAAAGATTACAATGGTGAAGCTGGTCAAGTCCGTCGGCTTGAGGTAGAGGGAAGTGTTGTGCATGTTATGAAAGCATTGGCAAACCATCCTCTGGCAGCACAGAGTTTGATTGAGGATGATTCGCTTCAGTTGCTCTTTCAAATGGTTGCACATGGGTCGTTGACCGTCTTTTCTCGATATAAAGAGGGACTAGTTCTGCTACACATCATACAACTTCATAGACATGCTATGCAGATTCTTGGTCTTCTTTTGGTCAATGACAATGGGAGCACTGCACGATATATTCGCAAACATCATCTGATAAAAGTTCTTTTGATGGCAGTTAAGGATTTCAATCCTGATTGTGGTGATTCTGCATACACTATGGGAATTGTAGATTTGTTGCTTGAATGTGTAGAATTGTCGTATAGGCCTGAGGCTGGCAGTGTTAGGCTCAGGGAGGATATTCATAATGCCCATGGGTATCAGTTCCTCGTTCAGTTTGCATTAGCAATTTCATCCATGACAAAGAATCAGGGGTTCCATTCTGTTTATCTTAGATCTTCAGATGGTCCGGATGTATCTAATGTTGCAGACATGCAGGATCTCATGGGAGAAAAGGAGTCTTTAACTCAACAACTTTCTCCTACAGTCTCTAGGTTGCTTGATGTTCTTGTCAATCTCGCTCAAACTGGCCCAACTGAGTCTGCTGGAACTTCTGGAGTCAAAGGTGCCAAATCTTCTCATATGAGGTCCAGTGGTCATAACAGGAGTCGCACAGCATCTTCAGACCGCTTGGCTGATGAAGTGTGGGAAAAGGACAATAATAAAGTTAAAGACCTCGAAGCAGTTCAGATGTTGCAGGATATTTTTCTCAAATCGGACAGTAGGGAGTTGCAAGCAGAAGTTCTTAATCGGATGTTTAAAATATTCTCAAGTCATCTTGAAAACTACAAGTTGTGCCAACAGTTACGGACTGTTCCACTTTTAATCCTAAATATGGCCGGTTTTCCTCCTTCCTTGCGTGAGATAATTCTAAAAATTCTCGAGTATGCTGTCACTGTTGTGAATTGCATTCCTGAACAAGAATTACTTTCACTTTGCTGCTTGTTGCAGCAACCAATAGCATCAGATTTGAAGCACACTATACTTTCTTTCTTTGTTAAACTTCTATCATTTGACCAGCAGTACAAGAAAGTGCTTCGAGAAGTTGGTGTATTGGAGGTTTTGTTGGATGACCTCAAGCAGCACAAGTTCCTTTTGGGTGCAGACCATAGTAATACTAATCTGCTGGATAAAAAATCAGGATCAAGCAGCTTCAAAACACACTTGGACAATAAGGATGTTATTATTACATCACCCAGGCTAATGGAATCTGGTTCAGGAAAGCTTCCTATATTCGAAATTGATGGTACAATTTCTGTTGCATGGGATTGCATGGTCTCTTTACTAAAGAAAACAGAAACAAATCAGTCATCTTTTCGTTTGGCTGATGGTGTAACTGCTGTTCTCCCATTTCTTGTGTCTGATATACATCGTTCGGGGGTCCTAAGGGTCTTGTCATGTTTGATCATTGAAGATGGTAGCCAGGCACATCCTGAAGAGTTAGGTGCAATTGTTGAAATCCTAAAAAGTGGAATGGTTACGAGTGTTTCAGGATCTCAATACAGGCTTGAAAATGATGCAAAATGTGACACTATGGGAGCTTTGTGGCGCATTTTGGGAGTTAATAACTCTGCTCAGAGGGTTTTTGGTGAAGCTACTGGCTTTTCTCTTCTGCTTACCACACTGCATAGTTTCCAAGGCGATGGAGGGAATGCGGATCAATCTTCTTTGGAAGTCTACATTAAGGTGTTTACATACCTGTTGCGTGTTGTGACTGCTGGAGTGTGTGATAATGCAGTTAACCGGATAAAATTGCACACAATTATAACATCCCAGACTTTTTACGAGCTCCTATCTGAGTCTGGCTTACTTTGTGTGGACTGTGAAAAACAAGTCATACAGTTACTGTTCGAACTAGCTCTTGAAATTGTGCTTCCACCGTTCTTGTCATCGGAAAGTTTTGCATCATCTGATATGCCTGATAGCGGGACTTCAAGTTTTTCACTAACGACCACATCAGGTTCATTTCATCCCGATAAGGAACGGGTGTACAATGCAGGTGCTGTTAGAGTTCTTATTCGTTCATTACTGCTCTTTACCCCGAAGCTGCAGCTTGAAGTGCTGAAACTTATTGAAAGTCTAGCTCGTGCTGGCCCCTTCAATCAGGAAAACCTCACCTCTGTAGGTTGCGTAGAACTTCTGCTGGAAACCATCCGCCCATTCCTTTCGGGTTCGTCTCCATTACTTAAATATGCTTTGGAGATTGTAGAAGTTCTCGGGGCATACAGGCTATCTACATTAGAACTCCGAATGCTCATTAGATATGTGTTGCAAATGAGGCAAAAGAAATCTGGTAGCATACTTGTTGGAATGATGGAAAGGTTAATACTTATGGAGGATATGGCCTCAGACAGTGTTTCACTTACACCGTTTGTAGAAATGGACATGAGTAAAACTGGGCATGCGTCTATTCAAGTCTCCCTGGGAGAAAGATCTTGGCCTCCAGCTGCTGGTTATTCATTTGTTTGTTGGTTTCAGTTTCAAAATCTTTTCAAGTCACAAGTTAAGGAAACAGAGTCTTCCAAAGCTGGTACTTCGAAAAGGCGGCCTGGTGGGCAAAATCACGAGCGGCATATTCTACGAATGTTTTCTGTGGGTGCAGCGAATAATGAAACTACATCCTATGCAGAACTTTATCTTCAGGAGGATGGTGTTTTGACCCTTGCAACCAGCAACTCGAACTCCCTATCATTTTCAGGCTTGGAATTTGAGGAGGGCAGGTGGCATCACCTTGCAGTTGTACATAACAAACCAAATGCTCTTGCTGGACTATTCCAAGCTAGTGTTGCTTATGTGTATCTTGATGGAAAACTGAGACACACAGGGAAACTAGGATATTCTCCATCACCGTTTGGAATACCTTTGCAGGTAACAGTAGGGACCCCTGTTACCTGTGCAAAAGTTAGTGAGCTGACCTGGAAGGTCCGCTCGTGCTATCTTTTTGAAGAGGTGCTCACCTCAGGTTGTATTTGTTTCATGTACATTCTTGGTAGAGGATATAGGGGGATCTTCCAAGACACAGATCTCCTTCGTTTTGTCCCTAACCAGGCATGTGGTGGTGGTAGCATGGCTATCTTAGATTCACTAGATGCTGACTCGACCATGGTTTCTAATTCACAGAAGCTTGATACTGCAAACAAGAAAGGAGATACAAAAGCAGATGGTAGTGGAATTGTTTGGGATATGGAGAGACTAGCGAATCTCTCCTTACAGCTTGCTGGAAGGAAGCTTATATTTGCGTTTGATGGCACCTGTACAGAAGCTAATAGAGCATCTGGGGCTTTACACATGCTCAATCTTGTTGATCCAATGTCTGCTGCAGCTTCTCCTATTGGAGGTATCCCACGTTTTGGACGGCTTCATGGGAATATCTATCTATGTAGGCAATGTGTAGTTGGCGATACTATCTGTCCAGTTGGTGGAATTACTGTTGTCCTTTCCTTGGTTGAGGCTGCTGAGACTAGGGACATGCTTCACATGGCCCTCACTTTATTGGCTTGTGCTCTTCATCAGAATCCTCAGAATGTGAGAGACATGCAGAAATGCCGGGGATATCATCTGCTCTCTCTCTTTTTGCGTCCACGAATGTCACTATTTGATATGCAATCTCTTGAGATATTTTTCCAGATTGCTGCCTGTGAAGCTTCATTTTCTGAACCAAGGAAGTTGAAGTATACTCGGACTAATTTGTCACCAGCCTCAACTGTGCAGGAAACCAGTTTTGAGGAAATTAATCTGTCAAGGTTCCGTGAGGAGTTTTCATCAGTTGGATCTCAAGGAGACTTGGATGACTTTTCGGCGCAGAAAGATTCATTTAGTCATATTTCAGAGCTAGAAAATGTTGATATTCCAAATGAGACCTCAAATTGCATTGTATTGTCCAATGCAGATATGGTGGAGCATGTCCTGTTGGATTGGACATTGTGGGTAGTGGCTTCAGTTTCGATTCAAATTGCACTCCTTGGTTTTCTGGAACATTTAGTGTCAATGCACTGGTACAGGAACCATAACCTCACTATTTTGCGCCGTATAGACCTTGTTCAACATTTACTCGTTACTCTGCAACGTGGTGATGTTGAAGTTCCTGTTTTGGAGAAATTGGTTGTATTGCTTGGGGTTATTCTAGAAGATGGTTTTCTGTCTTCTGAACTGGAACATGTGGTTAGGTTTGTCATCATGACATTTGATCCACCTGAACTGACACCTCGAAATCCAATAATGCGTGAGGCCATGGGGAAGCATGTAATCGTTCGAAATATGCTGCTGGAGATGCTCATTGATCTGCAAGTAACCATTAAATCAGAAGAATTGCTTGAACAGTGGCACAAGATTGTTTCGTCCAAATTGATAACATATTTTCTAGATGAAGCTGTCCACCCTACAAGCATGAGATGGATCATGACTCTTCTTGGTGTTTGTCTTACTTCCTCTCCTACATTTGCCCTAAAATTTCGCTCTAGTGGAGGTTTTCAAGGCTTGTCCCGGGTGCTTCCTAGTTTCTATGATTCCCCAGACATATATTATATCTTGTTTTGTCTGATTTTTGGCAAGCCTGTCTATCCTAGATTGCCAGAAGTTCGGATGCTAGATTTTCACGCCCTTATGCCGAATGATGGAAGTTCTGTGGAACTGAAACTTATAGAGTTGTTGGAGTCTGTGATTACTATGGCAAAATCTACTTTTGATAGGTTGAGCCTTCAGTCAATGCTGGCTCACCAAACTGGTAATCTCTCCCTGGTTGCTGGCATTGTGGCAGAACTTGTGAATGGAAATGCAGACATGACTGGAGAGCTTCAAGGTGAAGCATTGATGCATAAGACATATGCAGCACGATTAATGGGTGGAGAGGCATCAGCACCAGCAGCTGCTACTTCAGTCTTGAGGTTTATGGTTGATTTGGCAAAAATGTGCCCCCCTTTCGCTGCTATTTGTAAACGAGCAGAGTTTCTTGAAAGCTGTGGTGACCTATATTTTTCTTGTGTCAGAGCAGCCCATGCTGTGAAGATGGCGAAGGAACTCTCTTCAAAGACAGAAGAGAAAAGCTCAAATGATTTTGATGATACATGTAGTTCCCAGAACACATTCTCTAGCTTACCTCACGAACAGGATCAGTCAGCCAAAACGTCCATTAGTGCTGGAAGCTTCCCTCCTGCTCAAGTAAGTACAAGTTCTGAAGATACAGGTGTCCCCCCGAATTCTGCGATGGAGGAGAAAGCAGATATCAAAGTTTGTACATCTCGGGAGGAGTTGAACAAATCTGTGCAAGAGGATGCACAAGCTCTGCAGAGCTTAGATGGTGACATTGCTGACCAGATGTCTGCTACTTCCAGCATGGATGAATCTAGCTTCCGTAAGAAGAAAGTTGTGCCGGATCCCATCAAACCACCAGATTCGCAGAGTTCTGCTTCTTTTACCATGCTTGATTCTCCAAATTTATCTGAAAAGTCCATCTCTAGAGTTCCAATCAGTCCTTCACCAGTTCTTGCATTGACATCGTGGCTAGGAAGTACGGGCCATAATGAATTAAGATCTCCCTTGGCTGCCAGTCCTTCCGTGGATCATTCTGTAACTAGTATTGAATTTGATCAATCTTCAGAGGTGAAGATGACTTCTCTGGGGACTTCTACTGCAAATACCTTTTTTGCAGTAAGTCCAAAGCTGCTTCTTGAAATGGATGATTGTGGTTATGGAGGTGGTCCTTGTTCTGCTGGAGCAACTGCTGTTTTAGATTTTATTGCAGAAGTTCTTTCTGAGTTTGTGACTGAGCAAGTAAAAGCATCACAGATTATAGAGGGGATCTTGGAAAGTGTTCCCTTATACGTTGATGCAGATTCCGTGTTGGTATTCCAGGGTTTGTGCCTGAGCAGACTGATGAACTTTCTGGAAAGACGTCTCTTGCGTGATGACGAAGAAGATGAGAAAAAGCTGGATAAAGGTCGTTGGTCCTCAAATTTGGATTCATTATGCTGGATGATAGTGGACCGTGCATATATGGGTGCTTTTCCTCAACCAGCTGCTGTACTGAGGACCCTCGAGTTCTTATTGTCTATGTTACAATTGGCAAATAAAGATGGCCGAATTGAAGAAGCTACTCCTAGTGGAAAGGGTCTCTTATCTATTGGAAGAGGGAGTAGGCAACTTGATGCATACATATATTCAATTCTTAAAAATACAAATCGTATGATATTGTATTGCTTTCTGCCAACATTCTTGACTTCAATAGGAGAAGACAATCTGCTTTCAAGCTTAAGTTTGCTAGTTGAACACAAGAAGAGAGTATCCTCAAACTCTTTGGATGATAATTTAGGAATTGATATATGCACAGTCCTGCAGTTAATAGTCGCTCACAGGCGAATTTTGTTTTGTCCCAGCAATATGGATACTGACATAAATTGTTGTCTCTGTGTAAATTTGATATCTCTTCTTCAAGACCAGCGGCAGAGTGTACTGAACATGGCAGTTGATATTGTCAAATACCTCCTGGTGTATCGTAGGTCAGCTCTAGAAGATTTGCTCGTCTCCAAACCAAACCAAGGACAGCACCTTGATGTACTACATGGTGGGTTTGACAAGTTATTGTCCGGAAGTTTGTCTGATTTCTTTGAGTGGCTTCAAAACTCCGAACAGGTAGTGGATAAAGTACTAGAGCAGTGTGCTGGCATTATGTGGGTACAGTATATTACTGGATCTGCGAAATTTCCTGGCGTGAGAATTAAAGCTATGGAAGGTCGTCGTAAGAGAGAAATGGGGAGAAAATTAAAGGATACATCAAAGTTAGATTCAAAGCACTGGGAGCAGGTGAATGAACGAAGATATGCTCTGGAATTAGTACGGGATGCAATGTCTACTGAGCTGAGAGTTGTCCGTCAAGACAAGTATGGATGGGTTCTGCATGCTGAGAGTGAGTGGCAAACCCATCTTCAACAACTTGTTCATGAGCGCGGAATATTCCCAATGCGAAAATCCTCTGTTCCAGAGGATCCGGACTGGCAACTTTGTCCAATTGAAGGTCCATACAGGATGCGGAAAAAGCTTGATCGCTGCAAATTGAAAATTGACACCATCCAAAACATTCTTGATGGACAATTTGAATTAGCGGAAGCAGAGCTTGTGAAAGCCAGAAATGAGAACGATCCAGGCTCTTCTGATAATGATTCAGAACCATCTTTTCCACTCTTTACTGATATTCCTGGTAGTGCCAAACAGAATGGTCTTGATGGAGAGCTGTATGAAGAATCATTTTTCAAAGAACCAGGTAATGTCAAAGAGGTTGCTTCTGTAAAGAATGAGTGGAGTGATGACAGAACTAGTAGTATAAATGATGCAAGTCTACACTCCGCACTTGAGTTTGGTGGTAAGTCTAGTTCAGGCTCTCTTCCCATAGATGAGAGTATACAAGGAAGATCTGACCTAGGATCTCCGTGGCAATCTACTTCAGCAAAAATCGGTGATGTCAAAGTTACAGATGATAAACCAGATAAGGAACTTCATGACAACGGAGAATACCTAATCAGACCTTATCTGGAACCTTTTGAAAGGATACGATTTCGATATAACTGTGAACGAGTTGTAGGCCTTGACAAACATGATGGCATATTTTTGATTGGCGAGCTTTCTCTGTATGTGATTGAGAATTTTTTCATTGATGAATCCGGGTGCATTTGTGAAAAGGAATTCGAAGATGACCTCTCTATTATTGATCAGGCTCTGGGTGTAAAGAAGGATGCTACTGGCAGTCTGGATTTCCAGTCCAAGTCAACTTCATCTTGGGGCACAACTGTTAAGTCCTGGGTTGGAGGAAGAGCATGGGCCTATAATGGCGGTGCATGGGGAAAGGAGAAAGTGTGTACTGGTGGCAACATGCCTCACCCTTGGCACATGTGGAAACTTGACAGTGTTCATGAAATGTTGAAGCGTGATTACCAGCTGCGTCCTGTTGCTGTCGAGATATTTAGCATGGATGGATGTAATGATCTCCTGGTGTTCCACAAAAAGGAGAGGGAAGAGGTTTTTAAAAATTTAGTGGCCATGAATCTTCCCAGGAATAGCATGTTGGACACAACCATTTCAGGATCATCAAAACAAGAAGGCAACGAGGGTAGCCGTCTATTTAAGACGGTGGCTAAATCCTTTTCAAAAAGGTGGCAAAATGGAGAAATAAGCAACTTTCAGTACCTCATGCATCTCAACACCTTGGCAGGACGTGGATACAGTGATCTTACCCAATATCCAGTGTTTCCATGGGTTTTGTCAGATTATGAGAGTGAAAATCTGGATTTATTGGATCCAAAAACATTTCGTAGACTTGATAAACCGATGGGTTGCCAGACACCAGAGGGTGAAGAAGAATTTGTGAAAAGATATGAGAGCTGGGATGATCCAGAGGTACCGAAATTTCATTATGGTTCACATTACTCAAGTGCTGGGATTGTCCTCTTCTATCTTTTGCGCCTACCACCATTCAGTGCAGAGAATCAAAAGTTACAGGGAGGTCAATTTGATCATGCTGATCGTCTTTTCAATAGTGTTAGAGATACTTGGTTAAGTGCAGCTGGTAAGGGCAACACATCAGATGTGAAGGAGTTGATTCCAGAATTTTTCTACATGCCAGAGTTCCTGGAAAATCGTTTCAATCTTGATTTGGGAGAGAAACAGTCGGGAGAGAAGGTTGGTGATGTTGGTTTACCTCAGTGGGCTAAAGGCAGTGTTAGGGAGTTCATCAGAAAGCATAGGGAGGCACTGGAATCTGATTATGTTTCAGAAAATTTGCATCATTGGATAGATCTCATCTTTGGATGCAAACAAAGAGGGAAGGCGGCTGAGGAAGCTGTGAATGTCTTTTATCACTACACATATGAGGGCAGTGTGGACATAGACTCGGTTACAGATCCTGCAATGAAGGCCTCAATTCTAGCACAAATTAATCATTTTGGGCAGACACCCAAACAATTATTTCTCAAACCCCATGTCAAAAGGCAGGTTGACCGAAGGCTTCCTCATCCACTCAGGTACTCGAACCATCTTGTTCCACATGACGTGCGCAAGACTACCTCTTCCATAACTCAGATTGTTACTGTGAATGAGAAAATCCTAGTGGCAGGAACAAATTGTTTGCTAAAACCAAGAACATATACCAAGTATGTTGCGTGGGGTTTTCCTGATCGTAGCTTAAGAATTATGAGTTATGATCAGGATCGACTGGTCTCCACACATGAGAATCTTCATGGAGGAAACCAGATTCAATGCACTGGTGTGAGCCATGATGGTCAGATTCTGGTAACTGGGGCTGATGATGGCTTAGTTTCTGTTTGGAGATTCAGCAAGTATGGTCCCCGTATCATGAGACACTTACAGCTAGAGAAGGCACTTTGTGCCCACACATCCAGAATCACATGCCTTCATGTTAGCCAGCCTTACATGCTAATTGTGAGCGGATCAGATGACTGCACTGTTGTTATATGGGATCTCAGCTCCTTGGTTTTCGTTAGGCAGCTCCCTGAGTTCCCAGCACCGATATCCGCAATTTATGTGAATGATTTGACTGGGGATATTGTTACGGCAGCTGGAATCTTGCTTGCTGTATGGAGCATTAATGGGGACTGCCTTGCAATGGTTAACACATCCCAACTGCCTTCTGATTCAATTCTTTCCGTGACAAGTAGTTCATTTTCTGATTGGCTGGATACGAACTGGTTTGTAACGGGTCATCAGAGTGGTGCTGTCAAGGTGTGGCAAATGGTGCACCACTCCAACCATGAGAGTCCCCAACAGAGGTCAACGAGCAGTGGAACGAGTGGTTTAAATCTCAGTGATAAGGCTCCAGAGTACAGGTTTGTGCTCCACAAGGTACTGAAGTATCATAAGCATCCTGTTACTGCCCTGCACCTTACAGTTGACCTAAAGCAGTTACTAAGTGGTGATTCTGGCGGGCATTTGCTATCATGGACACTGCAAGATGAGAGCGTGAAAACTATTCAGGGGTGA

Protein Analysis

3608

Amino Acids

401.07

Weight (kDa)

5.71

Isoelectric Point (pI)

42.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arm_4 PF23295 669 - 883 4.1e-06 Armadillo-like repeats
PH_BEACH PF14844 2781 - 2840 3.6e-07 PH domain associated with Beige/BEACH
Beach PF02138 2879 - 3158 3.4e-119 Beige/BEACH domain
WD40_CDC20-Fz PF24807 3183 - 3351 6.2e-08 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 3210 - 3342 1.6e-11 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 3211 - 3414 1.8e-15 WDR5 beta-propeller domain
WD40_Prp19 PF24814 3211 - 3362 2.5e-09 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 3211 - 3326 3.4e-06 Echinoderm microtubule-associated protein second beta-propeller
NBCH_WD40 PF20426 3212 - 3373 1.1e-11 Neurobeachin beta propeller domain
WDR55 PF24796 3220 - 3419 8.2e-07 WDR55
Beta-prop_TEP1_2nd PF25047 3234 - 3376 2.9e-08 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 3242 - 3411 2.2e-12 WDR3 first beta-propeller domain
WD40 PF00400 3287 - 3321 6.2e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2606
AarI CACCTGC 3 cut(s) 2828, 3549, 7627
AasI GACNNNNNNGTC 1 cut(s) 4528
AatII GACGTC 1 cut(s) 6733
Acc16I TGCGCA 1 cut(s) 9881
Acc36I ACCTGC 5 cut(s) 2828, 3549, 3697, 7627, 9808
Acc65I GGTACC 1 cut(s) 9226
AccB1I GGYRCC 3 cut(s) 1406, 4088, 9226
AccB7I CCANNNNNTGG 4 cut(s) 787, 3290, 4190, 4259
AccBSI CCGCTC 3 cut(s) 3409, 3768, 10272
AccI GTMKAC 6 cut(s) 2517, 4514, 7685, 8170, 8233, 9142
AccII CGCG 1 cut(s) 7782
AccIII TCCGGA 3 cut(s) 1249, 7421, 7822
AcoI YGGCCR 3 cut(s) 1677, 6913, 8865
AcyI GRCGYC 1 cut(s) 6730
AdeI CACNNNGTG 1 cut(s) 10211
AflII CTTAAG 3 cut(s) 53, 7087, 10009
AflIII ACRYGT 3 cut(s) 4996, 5903, 8718
AhdI GACNNNNNGTC 1 cut(s) 6154
AhlI ACTAGT 3 cut(s) 886, 6410, 8147
AjiI CACGTC 2 cut(s) 9044, 9877
AjuI GAANNNNNNNTTGG 4 cut(s) 6295, 6327, 8876, 8908
AleI CACNNNNGTG 2 cut(s) 1739, 10091
Alw21I GWGCWC 6 cut(s) 968, 2631, 3795, 4345, 10584, 10680
Alw44I GTGCAC 1 cut(s) 10580
AlwNI CAGNNNCTG 8 cut(s) 2686, 2843, 3290, 5705, 6857, 8548, 9731, 10114
Ama87I CYCGRG 5 cut(s) 1721, 3056, 5322, 6078, 6872
Aor13HI TCCGGA 3 cut(s) 1249, 7421, 7822
ApaLI GTGCAC 1 cut(s) 10580
ArsI GACNNNNNNTTYG 2 cut(s) 9792, 9824
AseI ATTAAT 4 cut(s) 4572, 5675, 9762, 10431
Asp700I GAANNNNTTC 7 cut(s) 648, 684, 1524, 3427, 5921, 6648, 8477
Asp718I GGTACC 1 cut(s) 9226
AspA2I CCTAGG 1 cut(s) 8251
AspLEI GCGC 6 cut(s) 2391, 4642, 4866, 7782, 9291, 9882
AsuC2I CCSGG 4 cut(s) 4388, 5323, 5324, 8494
AsuII TTCGAA 5 cut(s) 2076, 2691, 3377, 5092, 8517
AvaI CYCGRG 5 cut(s) 1721, 3056, 5322, 6078, 6872
AvrII CCTAGG 1 cut(s) 8251
AxyI CCTNAGG 3 cut(s) 1110, 2225, 3799
BaeGI GKGCMC 4 cut(s) 5753, 8615, 10216, 10584
BaeI ACNNNNGTAYC 6 cut(s) 6009, 6042, 10679, 10679, 10712, 10712
BalI TGGCCA 1 cut(s) 8867
BamHI GGATCC 5 cut(s) 11, 634, 6211, 7819, 9124
BanI GGYRCC 3 cut(s) 1406, 4088, 9226
BanII GRGCYC 2 cut(s) 81, 2631
BarI GAAGNNNNNNTAC 2 cut(s) 8744, 8776
BauI CACGAG 3 cut(s) 2925, 3404, 3769
BbsI GAAGAC 5 cut(s) 258, 932, 3351, 4974, 7074
Bbv12I GWGCWC 6 cut(s) 968, 2631, 3795, 4345, 10584, 10680
BbvCI CCTCAGC 1 cut(s) 9660
BceAI ACGGC 5 cut(s) 208, 4211, 4851, 8928, 10413
BcgI CGANNNNNNTGC 6 cut(s) 129, 163, 834, 868, 6315, 6349
BciVI GTATCC 7 cut(s) 4190, 7129, 7213, 7597, 8373, 9041, 10516
BclI TGATCA 5 cut(s) 2244, 6424, 8539, 9340, 10027
BcnI CCSGG 4 cut(s) 4388, 5323, 5324, 8494
BcuI ACTAGT 3 cut(s) 886, 6410, 8147
BfmI CTRYAG 9 cut(s) 138, 309, 322, 1323, 2888, 2961, 4158, 6122, 7169
BfrI CTTAAG 3 cut(s) 53, 7087, 10009
BfuAI ACCTGC 5 cut(s) 2828, 3549, 3697, 7627, 9808
BfuI GTATCC 7 cut(s) 4190, 7129, 7213, 7597, 8373, 9041, 10516
BglI GCCNNNNNGGC 1 cut(s) 3394
BglII AGATCT 6 cut(s) 1235, 3272, 3862, 6368, 8243, 9622
BlnI CCTAGG 1 cut(s) 8251
BmcAI AGTACT 1 cut(s) 7482
BmeRI GACNNNNNGTC 1 cut(s) 6154
BmeT110I CYCGRG 5 cut(s) 1721, 3056, 5322, 6078, 6872
BmgBI CACGTC 2 cut(s) 9044, 9877
BmrI ACTGGG 4 cut(s) 3246, 7639, 10131, 10392
BmuI ACTGGG 4 cut(s) 3246, 7639, 10131, 10392
BpiI GAAGAC 5 cut(s) 258, 932, 3351, 4974, 7074
BplI GAGNNNNNCTC 2 cut(s) 5867, 5899
BpmI CTGGAG 7 cut(s) 1416, 2580, 3267, 5126, 5646, 6570, 10644
Bpu10I CCTNAGC 3 cut(s) 1130, 6701, 9660
Bpu14I TTCGAA 5 cut(s) 2076, 2691, 3377, 5092, 8517
BpuMI CCSGG 4 cut(s) 4388, 5323, 5324, 8494
BsaBI GATNNNNATC 3 cut(s) 1029, 2208, 10032
BsaHI GRCGYC 1 cut(s) 6730
BsaI GGTCTC 4 cut(s) 2122, 4691, 6953, 10048
BsaWI WCCGGW 5 cut(s) 261, 1249, 2583, 7421, 7822
Bse118I RCCGGY 1 cut(s) 1679
Bse21I CCTNAGG 3 cut(s) 1110, 2225, 3799
Bse3DI GCAATG 6 cut(s) 47, 4232, 6141, 7686, 9741, 10455
Bse8I GATNNNNATC 3 cut(s) 1029, 2208, 10032
BseAI TCCGGA 3 cut(s) 1249, 7421, 7822
BseJI GATNNNNATC 3 cut(s) 1029, 2208, 10032
BseMI GCAATG 6 cut(s) 47, 4232, 6141, 7686, 9741, 10455
BseRI GAGGAG 4 cut(s) 3566, 4607, 6062, 6098
BseSI GKGCMC 4 cut(s) 5753, 8615, 10216, 10584
BseYI CCCAGC 4 cut(s) 7208, 9210, 9263, 10345
BsgI GTGCAG 8 cut(s) 954, 1962, 3459, 4568, 9327, 9408, 10270, 10706
Bsh1236I CGCG 1 cut(s) 7782
BshNI GGYRCC 3 cut(s) 1406, 4088, 9226
BsiHKAI GWGCWC 6 cut(s) 968, 2631, 3795, 4345, 10584, 10680
BsiHKCI CYCGRG 5 cut(s) 1721, 3056, 5322, 6078, 6872
BsmBI CGTCTC 3 cut(s) 3021, 6737, 7363
BsmI GAATGC 3 cut(s) 1749, 2497, 3096
Bso31I GGTCTC 4 cut(s) 2122, 4691, 6953, 10048
BsoBI CYCGRG 5 cut(s) 1721, 3056, 5322, 6078, 6872
Bsp119I TTCGAA 5 cut(s) 2076, 2691, 3377, 5092, 8517
Bsp13I TCCGGA 3 cut(s) 1249, 7421, 7822
Bsp1407I TGTACA 5 cut(s) 2829, 3580, 3819, 4094, 6071
Bsp19I CCATGG 4 cut(s) 1153, 3942, 5070, 9080
BspEI TCCGGA 3 cut(s) 1249, 7421, 7822
BspFNI CGCG 1 cut(s) 7782
BspHI TCATGA 7 cut(s) 673, 5016, 5238, 7774, 8329, 8740, 10179
BspMAI CTGCAG 5 cut(s) 142, 2892, 4162, 6126, 7173
BspMI ACCTGC 5 cut(s) 2828, 3549, 3697, 7627, 9808
BspQI GCTCTTC 5 cut(s) 192, 400, 4350, 7987, 8635
BspT104I TTCGAA 5 cut(s) 2076, 2691, 3377, 5092, 8517
BspT107I GGYRCC 3 cut(s) 1406, 4088, 9226
BspTI CTTAAG 3 cut(s) 53, 7087, 10009
BspTNI GGTCTC 4 cut(s) 2122, 4691, 6953, 10048
BsrBI CCGCTC 3 cut(s) 3409, 3768, 10272
BsrDI GCAATG 6 cut(s) 47, 4232, 6141, 7686, 9741, 10455
BsrFI RCCGGY 1 cut(s) 1679
BsrGI TGTACA 5 cut(s) 2829, 3580, 3819, 4094, 6071
BssAI RCCGGY 1 cut(s) 1679
BssNAI GTATAC 2 cut(s) 4515, 8234
BssNI GRCGYC 1 cut(s) 6730
BssSI CACGAG 3 cut(s) 2925, 3404, 3769
Bst1107I GTATAC 2 cut(s) 4515, 8234
Bst2BI CACGAG 3 cut(s) 2925, 3404, 3769
BstACI GRCGYC 1 cut(s) 6730
BstAFI CTTAAG 3 cut(s) 53, 7087, 10009
BstAPI GCANNNNNTGC 3 cut(s) 5834, 10211, 10579
BstAUI TGTACA 5 cut(s) 2829, 3580, 3819, 4094, 6071
BstBI TTCGAA 5 cut(s) 2076, 2691, 3377, 5092, 8517
BstDSI CCRYGG 6 cut(s) 1153, 3942, 5070, 6393, 8261, 9080
BstEII GGTNACC 1 cut(s) 5801
BstENI CCTNNNNNAGG 1 cut(s) 4173
BstFNI CGCG 1 cut(s) 7782
BstHHI GCGC 6 cut(s) 2391, 4642, 4866, 7782, 9291, 9882
BstPI GGTNACC 1 cut(s) 5801
BstSFI CTRYAG 9 cut(s) 138, 309, 322, 1323, 2888, 2961, 4158, 6122, 7169
BstSLI GKGCMC 4 cut(s) 5753, 8615, 10216, 10584
BstUI CGCG 1 cut(s) 7782
BstV2I GAAGAC 5 cut(s) 258, 932, 3351, 4974, 7074
BstXI CCANNNNNNTGG 4 cut(s) 2044, 2483, 3893, 7216
BstZ17I GTATAC 2 cut(s) 4515, 8234
Bsu36I CCTNAGG 3 cut(s) 1110, 2225, 3799
BsuI GTATCC 7 cut(s) 4190, 7129, 7213, 7597, 8373, 9041, 10516
BtgI CCRYGG 6 cut(s) 1153, 3942, 5070, 6393, 8261, 9080
BtgZI GCGATG 2 cut(s) 2496, 6056
BtrI CACGTC 2 cut(s) 9044, 9877
BtsI GCAGTG 8 cut(s) 966, 1126, 2462, 7496, 9550, 9709, 10630, 10787
BveI ACCTGC 5 cut(s) 2828, 3549, 3697, 7627, 9808
CaiI CAGNNNCTG 8 cut(s) 2686, 2843, 3290, 5705, 6857, 8548, 9731, 10114
CciI TCATGA 7 cut(s) 673, 5016, 5238, 7774, 8329, 8740, 10179
CfoI GCGC 6 cut(s) 2391, 4642, 4866, 7782, 9291, 9882
Cfr10I RCCGGY 1 cut(s) 1679
Cfr9I CCCGGG 1 cut(s) 5322
CseI GACGC 3 cut(s) 3234, 4406, 8759
CsiI ACCWGGT 1 cut(s) 8092
CspCI CAANNNNNGTGG 4 cut(s) 4, 39, 2706, 2741
DraI TTTAAA 3 cut(s) 1600, 8854, 10641
DraIII CACNNNGTG 1 cut(s) 10211
DrdI GACNNNNNNGTC 1 cut(s) 4528
DriI GACNNNNNGTC 1 cut(s) 6154
DseDI GACNNNNNNGTC 1 cut(s) 4528
EaeI YGGCCR 3 cut(s) 1677, 6913, 8865
Eam1105I GACNNNNNGTC 1 cut(s) 6154
EciI GGCGGA 1 cut(s) 2984
Ecl136II GAGCTC 1 cut(s) 2629
Eco147I AGGCCT 3 cut(s) 1108, 8415, 9743
Eco24I GRGCYC 2 cut(s) 81, 2631
Eco31I GGTCTC 4 cut(s) 2122, 4691, 6953, 10048
Eco32I GATATC 4 cut(s) 4394, 6061, 7257, 10356
Eco53kI GAGCTC 1 cut(s) 2629
Eco81I CCTNAGG 3 cut(s) 1110, 2225, 3799
Eco88I CYCGRG 5 cut(s) 1721, 3056, 5322, 6078, 6872
Eco91I GGTNACC 1 cut(s) 5801
EcoICRI GAGCTC 1 cut(s) 2629
EcoNI CCTNNNNNAGG 1 cut(s) 4173
EcoO109I RGGNCCY 4 cut(s) 560, 2221, 3720, 6867
EcoO65I GGTNACC 1 cut(s) 5801
EcoRI GAATTC 2 cut(s) 6034, 8513
EcoRV GATATC 4 cut(s) 4394, 6061, 7257, 10356
EcoT22I ATGCAT 3 cut(s) 5655, 6988, 9024
EcoT38I GRGCYC 2 cut(s) 81, 2631
Esp3I CGTCTC 3 cut(s) 3021, 6737, 7363
FalI AAGNNNNNCTT 8 cut(s) 1752, 1784, 5136, 5168, 6935, 6967, 7932, 7964
FauI CCCGC 2 cut(s) 2759, 10760
FauNDI CATATG 3 cut(s) 1422, 5662, 9694
FbaI TGATCA 5 cut(s) 2244, 6424, 8539, 9340, 10027
FblI GTMKAC 6 cut(s) 2517, 4514, 7685, 8170, 8233, 9142
FriOI GRGCYC 2 cut(s) 81, 2631
FspI TGCGCA 1 cut(s) 9881
GlaI GCGC 6 cut(s) 2390, 4641, 4865, 7781, 9290, 9881
GsaI CCCAGC 4 cut(s) 7212, 9214, 9267, 10349
GsuI CTGGAG 7 cut(s) 1416, 2580, 3267, 5126, 5646, 6570, 10644
HgaI GACGC 3 cut(s) 3234, 4406, 8759
HhaI GCGC 6 cut(s) 2391, 4642, 4866, 7782, 9291, 9882
Hin1I GRCGYC 1 cut(s) 6730
Hin6I GCGC 6 cut(s) 2389, 4640, 4864, 7780, 9289, 9880
HinP1I GCGC 6 cut(s) 2389, 4640, 4864, 7780, 9289, 9880
HincII GTYRAC 8 cut(s) 534, 858, 2581, 8598, 9823, 10456, 10617, 10735
HindII GTYRAC 8 cut(s) 534, 858, 2581, 8598, 9823, 10456, 10617, 10735
HindIII AAGCTT 7 cut(s) 2063, 3962, 4067, 4482, 5980, 7084, 7871
HpaI GTTAAC 2 cut(s) 2581, 10456
Hpy99I CGWCG 2 cut(s) 732, 7575
HpyCH4IV ACGT 8 cut(s) 348, 4186, 4906, 5963, 6660, 6730, 9043, 9876
HpySE526I ACGT 8 cut(s) 348, 4186, 4906, 5963, 6660, 6730, 9043, 9876
Hsp92I GRCGYC 1 cut(s) 6730
HspAI GCGC 6 cut(s) 2389, 4640, 4864, 7780, 9289, 9880
KflI GGGWCCC 1 cut(s) 3720
Kpn2I TCCGGA 3 cut(s) 1249, 7421, 7822
KpnI GGTACC 1 cut(s) 9230
Ksp22I TGATCA 5 cut(s) 2244, 6424, 8539, 9340, 10027
KspAI GTTAAC 2 cut(s) 2581, 10456
LguI GCTCTTC 5 cut(s) 192, 400, 4350, 7987, 8635
MabI ACCWGGT 1 cut(s) 8092
MaeII ACGT 8 cut(s) 348, 4186, 4906, 5963, 6660, 6730, 9043, 9876
MbiI CCGCTC 3 cut(s) 3409, 3768, 10272
MfeI CAATTG 3 cut(s) 2289, 6896, 7842
MlsI TGGCCA 1 cut(s) 8867
MluNI TGGCCA 1 cut(s) 8867
MmeI TCCRAC 8 cut(s) 1887, 3127, 4588, 4731, 5469, 8614, 8874, 10614
Mox20I TGGCCA 1 cut(s) 8867
Mph1103I ATGCAT 3 cut(s) 5655, 6988, 9024
MroI TCCGGA 3 cut(s) 1249, 7421, 7822
MroXI GAANNNNTTC 7 cut(s) 648, 684, 1524, 3427, 5921, 6648, 8477
MscI TGGCCA 1 cut(s) 8867
MslI CAYNNNNRTG 6 cut(s) 918, 1739, 2525, 7386, 10091, 10551
Msp20I TGGCCA 1 cut(s) 8867
MspA1I CMGCKG 7 cut(s) 3287, 5705, 6854, 7276, 8767, 9392, 10403
MspCI CTTAAG 3 cut(s) 53, 7087, 10009
MunI CAATTG 3 cut(s) 2289, 6896, 7842
Mva1269I GAATGC 3 cut(s) 1749, 2497, 3096
MvnI CGCG 1 cut(s) 7782
NciI CCSGG 4 cut(s) 4388, 5323, 5324, 8494
NcoI CCATGG 4 cut(s) 1153, 3942, 5070, 9080
NdeI CATATG 3 cut(s) 1422, 5662, 9694
NsbI TGCGCA 1 cut(s) 9881
NsiI ATGCAT 3 cut(s) 5655, 6988, 9024
NspV TTCGAA 5 cut(s) 2076, 2691, 3377, 5092, 8517
OliI CACNNNNGTG 2 cut(s) 1739, 10091
PaeI GCATGC 3 cut(s) 344, 3245, 7736
PaeR7I CTCGAG 2 cut(s) 1721, 6872
PagI TCATGA 7 cut(s) 673, 5016, 5238, 7774, 8329, 8740, 10179
PaqCI CACCTGC 3 cut(s) 2828, 3549, 7627
PasI CCCWGGG 1 cut(s) 3262
PceI AGGCCT 3 cut(s) 1108, 8415, 9743
PciI ACATGT 3 cut(s) 4996, 5903, 8718
PciSI GCTCTTC 5 cut(s) 192, 400, 4350, 7987, 8635
PcsI WCGNNNNNNNCGW 1 cut(s) 6736
PctI GAATGC 3 cut(s) 1749, 2497, 3096
PdmI GAANNNNTTC 7 cut(s) 648, 684, 1524, 3427, 5921, 6648, 8477
PflMI CCANNNNNTGG 4 cut(s) 787, 3290, 4190, 4259
PfoI TCCNGGA 1 cut(s) 9456
PpuMI RGGWCCY 3 cut(s) 2221, 3720, 6867
PscI ACATGT 3 cut(s) 4996, 5903, 8718
PshBI ATTAAT 4 cut(s) 4572, 5675, 9762, 10431
PsiI TTATAA 1 cut(s) 2606
Psp124BI GAGCTC 1 cut(s) 2631
Psp5II RGGWCCY 3 cut(s) 2221, 3720, 6867
PspEI GGTNACC 1 cut(s) 5801
PspFI CCCAGC 4 cut(s) 7208, 9210, 9263, 10345
PspPPI RGGWCCY 3 cut(s) 2221, 3720, 6867
PspXI VCTCGAGB 1 cut(s) 6872
PsrI GAACNNNNNNTAC 6 cut(s) 1749, 1781, 2166, 2198, 8188, 8220
PstI CTGCAG 5 cut(s) 142, 2892, 4162, 6126, 7173
PstNI CAGNNNCTG 8 cut(s) 2686, 2843, 3290, 5705, 6857, 8548, 9731, 10114
PvuII CAGCTG 6 cut(s) 3287, 5705, 6854, 8767, 9392, 10403
RseI CAYNNNNRTG 6 cut(s) 918, 1739, 2525, 7386, 10091, 10551
SacI GAGCTC 1 cut(s) 2631
SapI GCTCTTC 5 cut(s) 192, 400, 4350, 7987, 8635
ScaI AGTACT 1 cut(s) 7482
SexAI ACCWGGT 1 cut(s) 8092
SfcI CTRYAG 9 cut(s) 138, 309, 322, 1323, 2888, 2961, 4158, 6122, 7169
Sfr274I CTCGAG 2 cut(s) 1721, 6872
SfuI TTCGAA 5 cut(s) 2076, 2691, 3377, 5092, 8517
SlaI CTCGAG 2 cut(s) 1721, 6872
SmaI CCCGGG 1 cut(s) 5324
SmiMI CAYNNNNRTG 6 cut(s) 918, 1739, 2525, 7386, 10091, 10551
SpeI ACTAGT 3 cut(s) 886, 6410, 8147
SphI GCATGC 3 cut(s) 344, 3245, 7736
SseBI AGGCCT 3 cut(s) 1108, 8415, 9743
SspI AATATT 2 cut(s) 1605, 7788
SstI GAGCTC 1 cut(s) 2631
StuI AGGCCT 3 cut(s) 1108, 8415, 9743
TaiI ACGT 8 cut(s) 351, 4189, 4909, 5966, 6663, 6733, 9046, 9879
TaqII GACCGA 1 cut(s) 9840
TauI GCSGC 5 cut(s) 296, 3388, 3412, 7279, 9659
TspMI CCCGGG 1 cut(s) 5322
Van91I CCANNNNNTGG 4 cut(s) 787, 3290, 4190, 4259
Vha464I CTTAAG 3 cut(s) 53, 7087, 10009
VneI GTGCAC 1 cut(s) 10580
VspI ATTAAT 4 cut(s) 4572, 5675, 9762, 10431
XagI CCTNNNNNAGG 1 cut(s) 4173
XbaI TCTAGA 4 cut(s) 4963, 5200, 6293, 7342
XcmI CCANNNNNNNNNTGG 5 cut(s) 665, 3893, 4729, 6391, 9078
XhoI CTCGAG 2 cut(s) 1721, 6872
XmaI CCCGGG 1 cut(s) 5322
XmaJI CCTAGG 1 cut(s) 8251
XmiI GTMKAC 6 cut(s) 2517, 4514, 7685, 8170, 8233, 9142
XmnI GAANNNNTTC 7 cut(s) 648, 684, 1524, 3427, 5921, 6648, 8477
ZraI GACGTC 1 cut(s) 6731
ZrmI AGTACT 1 cut(s) 7482
Zsp2I ATGCAT 3 cut(s) 5655, 6988, 9024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.