RchiOBHm_Chr6g0289881

domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
52956357 .. 52974251
17895 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26004

Sequence Viewer

Length: 10824 bp
ATGTTTCAGGGATCCAAAGGAGGTGGGAGAACGATGAAATGGGGAACATTGCTTAAGGACTTGAGAGAGAAGGTTGGCCTCACTAATTCCCCTGCCTCTGCTTCAGCTTCTTCTGCCACAGCTGCTGCTGCTTCTTCTTCTTCTTTGGATGCTCTTTCTTCCTCTACCAATGCTCTTACAGCTCTTCACGGCTCGTACTCTCCTTCAAGAGACAAACATGAATTGGAATTGGACTTCAAGAGGTTTTGGGAAGAGTTCCGGTCATCCAGCTCTGAAAAGGAAAAAGAAGCGGCCTTAAATTTAACTGTAGATGTTTTCTGTAGATTAGTGAAGCAGCATGCAAACGTAGCTCAGTTAGTTACTATGTTAGTTGAAACACATATATTCTCGTTTGTGGTGGGAAGAGCATTTGTAACAGATATTGAAAAGTTAAAAATCAGCAGCAAAACAAGATGTTTGGATATAGCAAAAGTATTGAAGTTTTTTTCAGAAATCACAAAGGATGGCATCAGTCCTGGTTCAAATATGTTGACAGCCATAGAAGTCCTTGTTTCAGGGCCTATTGATAAGCAATCTCTCCTTGATTCGGGAATATTATGCTGTCTCATTCATATTCTTAATGCCCTTCTGGTTCCTGATGAAGCCATTCAACACCAAAAGGCTGCTGGTCATGAAGAACCATTTATATCTGAGAAAGATTACAATGGTGAAGCTGGTCAAGTCCGTCGGCTTGAGGTAGAGGGAAGTGTTGTGCATGTTATGAAAGCATTGGCAAACCATCCTTTGGCAGCGCAGAGTTTGATTGAGGATGATTCGCTACAGTTGCTCTTTCAGATGGTTGCAAATGGGTCGTTGACTGTCTTCTCTCGATATAAGGAGGGACTAGTTCTGCTGCACATCATACAACTTCATAGACATGCTATGCAGATTCTTGGTCTTCTTTTGGTCAATGACAATGGGAGCACTGCACGATATATTCGCAAGCATCATCTGATAAAAGTTCTTTTGATGGCAGTTAAGGATTTCAATCCTGATTGTGGTGATTCTGCATACACTATGGGAATTGTAGATTTGTTGCTTGAATGTGTAGAGTTGTCATATAGGCCTGAGGCTGGCGGTGTTAGGCTCAGGGAGGATATTCATAATGCCCATGGGTATCAGTTCCTCGTTCGGTTCGCATTGGCACTTTCATCCATGTCAAAAAATCAGGGGTTTCATGCTGTTTATTCTAGATCTTCAGACCAAAGTTCTGCTTTAGATGGTCCCAATGCATCTAATGTTGCAGACATGCAGGATATCATGGGAGAAAAGGAGTCCTTAACCCAACAACTTTCTCCTACACTCTCTAGGTTGCTTGATGTTCTTGTTAATCTAGCTCAAACTGGCCCAACTGAGTCTGCTGGAACTTCTGGAGTCAAAGGTTCCAAATCTTCCCATATGAGGTCTACTGGTCATAACAGGAGTCTCACAGCATCTTCCGATCGCTTGGCTGATGACGTGTGGGAAAAGGACAATAATAAAGTTAAAGACCTTGAAGCAGTTCAGATGTTGCAGGACATTTTTCTCAAAGCGGATAATAGGGAGTTGCAAGCAGAAGTTCTTAATCGGATGTTTAAAATATTCTCAAGTCATCTTGAAAACTACAAGTTGTGCCAACAGTTACGGACTGTTCCACTTTTAATCCTAAATATGGACGGTTTTCCTCCTTCCTTGCGCGAGATAATTTTAAAAATTCTCGAGTATGCTGTCACTGTGGTGAATTGCATTCCTGAGCAAGAATTACTTTCACTTTGCTGCTTGTTGCAGCAACCAATAGCATCAGATTTAAAGCACACTATACTTTCCTTCTTTGTTAAGCTTCTATCATTTGACCAGCAGTACAAGAAAGTCCTCCGAGAAGTTGGTGTCTTGGAGGTTTTGTTGGATGACCTCAAGCAGCACAAGTTCCTTTTGGGTGCAGACCATAGTAATACTAATCTGCTGGAGAAAAAATCGGGATCAAGCAGCTTCAAACCACACTTGGACAATAAGGATGTGATTATTTCATCACCCAGGCTAATGGAATCTGGTTCAGGGAAGCTTCCTATATTTGAAGTTGATGGTACAATTTCCGTTGCATGGGATTGCATGGTATCTTTACTAAAGAAAACTGAAACAAATCAGTCATCTTTTCGTTTGGCTGATGGGGTAACTGCTGTTCTCCCATTTCTTGTGTCTGATATACATCGCTCGGGTGTCCTAAGGGTCTTGTCATGTTTGATCATTGAAGATGGTAGCCAGGCACATCCTGAAGAGTTAGGTGCAATTGTTGAAATCCTAAAAAGTGGAATGGTTACAAGTGTTTCGGGATCTCAATACAGGCTTGAAAATGATGCAAAATGTGACACTATGGGAGCTTTGTGGCGCATTTTGGGAGTTAATAACTCAGCTCAGAGGGTTTTCGGTGAAGCTACTGGCTTTTCTCTTCTGCTTACCACACTGCATAGTTTCCAAGGTGATGGAGGGCATGCAGATCAATCTTCTTTGGAAGTCTACATTAAGGTGTTTACATACCTGTTGCGTGTTGTGACTGCTGGAGTGTGTGATAATGCAGTTAATAGGACAAAATTGCACACAATTATAACATCCCAAACTTTCTACGATCTTATATCCGAGTCTGGCTTACTTTGTGTGGACTGTGAAAAGCAAGTCATACAGTTACTATTCGAACTAGCTCTTGAAATTGTGCTTCCACCGTTCTTGACACCAGAAAGTCATACACCATCTGATGTGCCTGATAGTGGGGCGTCAAGTTTTTCACTAACGACTACATCAGGCTCATTTCATCCCAATAAGGAAAGGGTGTACAATGCTGGTGCTGTTAGAGTTCTCATTCGTTCATTACTGCTCTTTACTCCTAAGCTGCAGCTTGAAGTGCTGAAACTTATTGAAAGTCTTGCTCGTGCTGGCCCCTTCAATCAGGAAAACCTCACCTCTGTAGGTTGCGTAGAACTTCTGCTGGAAACCATCCACCCTTTCCTTTCGGGCTCATCTCCATTACTTAAATATGCTTTGGAGATTGTAGAAGTTCTTGGGGCATACAGGCTATCTGCATCAGAACTTCGAATGCTCATTAGATATGTGTTGCAAATGAGGCAAATGAAATCAGGTAGCATACTTGTTGGAATGATGGAAAGGTTAATCCTTATGGAGGATATGGCCTCGGACAGTGTTTCTCTTGCACCCTTTGTAGAGATGGACATGAGCAAAATTGGGCATGCTTCCATTCAGGTCTCCCTGGGAGAAAGATCTTGGCCTCCAGCTGCTGGTTATTCATTTGTTTGTTGGTTTCAGTTTCAAAATCTTTTCAAGTCACAAGTTAAGGAAACAGAGTCTTCCAAAGCTGGTACTTCGAAAAGGCGGCCTAGTGGGCAAAATCACGAGCGGCATATTCTACGAATGTTTTCTGTGGGTGCAGCAAATAATGAAACTACATTCTATGCAGAACTATATCTTCAGGAGGATGGTGTTCTGACCCTCGCAACCAGCAACTCTTGCTCCCTATCATTTTCAGGCTTGGAATTTGAGGAGGGCAGGTGGCATCACCTTGCAGTTGTACATAACAAACCAAATGCTCTTGCTGGACTATTCCAAGCTAGTGTTGCTTATGTGTATCTTGATGGAAAGCTGAGACACACAGGGAAACTAGGATATTCTCCATCACCTTTTGGAATTCCTTTGCAGGTAACAGTAGGGACCCCTGTTACCTGTGCAAAAGTTAGTGAGTTGACCTGGAAGGTCCGCTCGTGCTATCTTTTTGAAGAGGTGCTCACCTCAGGTTGTATCTGTTTCATGTACATTCTTGGTAGAGGATATAGGGGGCTCTTCCAAGACACAGATCTCCTTCGTTTTGTCCCTAACCAGGCATGTGGTGGCGGTAGCATGGCTATCTTAGATTCACTAGATGCTGACTTGACCCTGGCCTCTAATTCACAGAAGCTTGACACTGCAAACAAGCAAGGAGACACAAAAGCAGATGGCAGTGGAATTGTTTGGGATATGGAGAGACTAGCAAATCTCTCCCTGCAGCTTGCTGGAAGGAAGCTTATATTTGCGTTTGATGGTACCTGTACAGAAGCTAATAGAGCATCTGGGGCTTTATACATGCTCAATCTAGTTGATCCAATGTCTGCAGCAGCTTCTCCTATTGGGGGTATTCCACGTTTTGGACGTCTTCATGGGGATATTTATCTATGTAGGCAATGTGTAGTTGGTGATACTATCTGTCCAGTTGGTGGAATTACTGTTGTCCTTGCCTTAGTTGAGGCTGCTGAGACTAGGGACATGCTTCACATGGCCCTCACTTTATTGGCATGTGCTCTTCATCAGAATCCTCAGAATGTGAGAGACATGCAGAAATGCCGGGGATACCATCTGCTATCTCTCTTTTTGCGTCCACGAATGTCACTATTTGATATGCAATCTCTTGAGATATTTTTCCAGATTGCTGCCTGTGAAGCTTCATTTTCTGAACCAAGGAAGTTGAAGTATACCCGGACTAATTTGTCACCAGCCTCAACTGTGCAGGAAACCAGTTTTGAGGAACTTAATCTGTCAAGGTTTCGTGAGGAGTTTTCATCAGTTGGATCCCAAGGAGACATGGATGATTTTTCTGCGCAGAAAGATTCATTTAGTCATATATCAGAGCTAGAAAATGTTGATATTCCAACTGAGACCTCAAATTGCATCGTGTTGTCCAATGCAGACATGGTTGAGCATGTCCTATTGGATTGGACATTGTGGGTAAAAGCTTCAGTTTCGATTCAAATTGCTCTCCTCGGTTTTCTGGAGCATCTAGTGTCAATGCACTGGTACAGAAACCATAACCTCACTGTTTTGCGCCGTATAGACCTTGTTCAACATTTACTTGTTACTCTGCAACGTGGTGATGTTGAAGTTCCTGTTTTGGAGAAATTGGTTGTATTGCTTGGGGTAATTCTAGAAGATGGTTTTCTGTCTTCTGAACTGGAACATGTGGTTAGGTTTGTCATTATGACATTTGATCCTCCAGAACTGACACCCAGACATCCAATAATGCGTGAGGCCATGGGGAAGCATGTAATCGTTCGAAATATGCTGCTGGAGATGCTGATTGATCTGCAAGTAACCATTAAATCAGAAGAGTTGCTTGAGCAGTGGCACAAGATTGTTTCATCCAAATTGATAACATATTTTCTAGATGAGGCTGTCCACCCGACAAGCATGAGATGGATCATGACTCTGCTTGGTGTTTGTCTTACTTCCTCTCCTACATTTGCACTGAAATTTCGCTCGAGTGGAGGTTATCAAGGCTTGTCCCGGGTGCTTCCTAGTTTCTATGATTCCCCAGACATATATTATATTTTATTTTGTCTGATTTTTGGCAAGCCTGTTTATCCTAGATTGCCAGAAGTTCGCATGCTAGACTTTCATGCCCTTATGCCGAATGATGGAAGTTCCGTGGAATTGAAATTTATAGAGTTGTTGGAGTCTGTGATTACTATGGCAAAATCTACTTTTGATAGGTTGAGCCTTCAGTCAATGCTTGCCCACCAAACGGGTAATCTTTCCCTGGTTGCTGGCATTGTGGCAGAACTTGTGAATGGAAATGCAGACATGGCTGGAGAGCTTCAAGGTGAAGCATTGATGCATAAAACATACGCGGCACGCTTAATGGGTGGGGAGGCATCAGCTCCTGCAGCTGCTACTTCAGTCTTGAGATTTATGGTCGATTTGGCAAAAATGTGCCCCCCTTTCACTGCTATTTGCAAACGAGCAGAGTTTCTTGAAAGCTGTGGTGACCTATATTTTTCTTGTGTCAGAGCGGCTCATGCTGTGAAGATGGCAAAGGAACTTTCTTCAAAGACAGAAGAGAAGAACTCAAATGATTTTGATGATACTTGTATTTCACAGAACACTAGCTTACCTCATGAACAGGATCAGTCTGCCAAAACCTCCATGAGTGCTGGAAGCTTCCCTCCTGCTCAAGTAAGTACAAGTTCTGAAGATACAGCTGTCCGACTGAATTCTGTGACTGATGAGAAAGCAGAGATGAAGGTTTGTACATCTCAGGAGGAATTGAACAAATTTGTGCAAGATGATGCACAAGCTGTTCAGAGCTTAAATGGCGACAATGCTGACCAGATGTCTGCTACTTCCAGCATGGATGAATCTAGCTTCTTTAACAAGAAAGTCAGGCCCGAGCCCATTAAACCACCAGATTCGCAGAGTTCTGCTTCTTTTACCATGCTTGATTCTCCAAATTTATCCGAAAAGTCCATCTCTAGAGTTCCAATCAGTCCTTCGCCGGTTGTAGCATTGACATCGTGGCTAGGAAGTGCAGGCAATAATGAATCCAGATCTCCCTTAGTCGCCAGTCCTTCCGTGGATTATTCTGTGACTAGTACTGAATTCGATCAATCTTCGGAGGTGAAGACCACTTCTCAGGGGATTTCTATTGCAAATACCTTTTTTGCAGTTACTCCAAAGCTGCTTCTTGAAATGGATGATTCTGGTTATGGAGGTGGTCCTTGTTCTGCCGGAGCAACTGCTGTTTTAGATTTTATTGCAGAAGTTCTTTCCGAGTTTGTGACTGAGCAAATAAAGTCATCACAGATTATAGAGGGCATCTTGGAAAGTGTCCCCCTATATGTTGATGCAGATTCCGTATTAGTATTCCAGGGTTTGTGCCTGAGCAGACTGATGAACTTTCTGGAAAGACGTCTCTTGCGTGATGACGAAGAAGATGAGAAAAAGCTGGATAAAGGTCGTTGGTCCTCAAATTTGGATTCATTATGCTGGATGATAGTGGATCGTGCATATATGGGTGCTTTTCCTCAACCAGCTGCTGTGCTGAGGACCCTCGAGTTCTTATTGTCTATGGTACAATTGGCAAATAAAGATGGCCGAATTGAAGAAGCTACTCCTAGTGGAAAGGGTCTCTTATCTATTGGAAGAGGGAGTCGGCAACTTGATGCATATATATATTCAATTCTTAAAAATACAAATCGTATGATATTGTATTGCTTTCTGCCAACATTCTTGGCTGCAATTGGAGAAGATGATCTCCTTTCAAGTGTAGGTTTGCTAATTGAACCCAAGAAGAGAGTATCCCCAAACTCTTCGGGAGATAATTTAGGGATTGATATCTGCACAGTCCTGCAGTTATTAGTTGCTCACAGGCGAATTATGTTCTGTCCCAGCAATATGGATACCGACATAAACTGTTGTCTTTGTGTAAATTTGATCTCTCTTCTTCGAGACCAACGACAGAGCGTACGGAACATGGCAGTTGATATTGTCAAGTACCTCCTGGTGTATCGCAGGTCAGCTCTAGAAGATTTGCTTGTCTCTAAACCAAACCAAGGACAGCACCTTGATGTACTACATGGTGGGTTTGACAAGTTATTGACTGGAAGTTTATCTGGTTTCTTTGAGTGGCTTCAAAACTCTGAACAGGTTGTGGAAAAAGTACTAGAGCAGTGTGCTTCCATTATGTGGGTACAGTATATTACTGGATCTGCTAAATTTCCTGGCGTGAGAATAAAAGCTATGGAAGGTCGTCGTAAGAGAGAAATGGGGAGAAAATCAAAGGATACATCAAAGTTAGATTCAAAGCACTGGGAGCAGGTGAATGAACGAAGATATGCTCTGGAATTGGTACGGGATGCAATGTCTACTGAGCTGAGAGTTGTCCGTCAAGACAAGTATGGATGGGTTCTGCATGCTGAGAGTGAGTGGCAAACCCATCTTCAACAACTTGTTCATGAGCGCGGAATATTCCCAATGCGAAAATCCTCTGTTCCAGAGGATCCGGACTGGCAACTTTGTCCAATTGAAGGTCCATACAGGATGCGGAAAAAGCTTGATCGGTGCAAATTGAAAATTGATACCATCCAAAACATTCTTGATGGACAATTTGAAGTAGCTGAAGCAGAGCTTGTCAAAGCCAGAAATGAGAACGATCCAGGCTCTTCTGATAATGATTCTGAACCGTTCTTTCAACTCTTTCCTGATAATGCCAAACAGAATGGTCTTGACAGAGAGCTGTATGATGAATCATTTTATAAAGAACCAGATGATGTCAAAGAGGTTGCTTCTGTTAGGAATGAGTGGAGTGATGATAGAACTAGTAGTATAAATGAAGCAAGTCTACACTCTGCACTTGAGTTTGGTGGTAAGTCTAGTTCAGGGTCTCTTCCCATAGATGAGAGTATACAAGGAAGATCTGACCTAGGATCTCCATGGCAATCCTCTTCTGCAAGAACTGATGATGTCAAAGTTACAGATGATAAACCAGACAAGGAACTCCATGACAATGGAGAATACCTAATCAGACCTTATCTGCAACCTTTCGAAAGGATACGATTTCGATATAACTGTGAACGAGTTGTAGGCCTTGACAAACATGATGGCATATTTTTGATAGGCGAGCTCTCTCTGTATGTGATTGAGAATTTTTTCATTGATGAATCTGGGTGCATTTGTGAAAAGGAATTCGAAGATGACCTCTCTATTATTGATCAGGCTCTGGGGGTAAAGAAGGATGTTACTGGCAGTATGGATTTCCAGTCCAAGTCAACTTCATCTTGGGGCACAGCTGTTAAGTCCTGGGTTGGGGGAAGAGCATGGGCCTATAATGGTGGTGCATGGGGAAAGGAGAAAGTGTGTACTGGTGGCAACCTGCCTCACCCTTGGCACATGTGGAAACTTGACAGTGTTCATGAAATGTTGAAGCGTGATTACCAGCTGCGTCCTGTTGCTGTTGAGATATTTAGCATGGATGGATGTAATGATCTCCTGGTGTTCCACAAAAAGGAGAGGGAGGAGGTTTTTAAGAATCTAGTGGCCATGAATCTTCCCAGGAATAGCATGTTGGACACAACCATTTCAGGATCATCAAAACAAGAAAGCAACGAGGGTAGCCGTCTATTTAAGACGGTGGCTAAATCCTTTTCAAAAAGGTGGCAAAATGGAGAAATAAGCAATTTTCAGTACCTCATGCATCTCAATACCTTGGCAGGACGTGGATACAGTGATCTTACCCAATATCCAGTGTTTCCATGGGTTTTGTCAGATTATGAGAGTGAAAATCTGGACTTATTGAATCCAAAAACATTTCGTAGACTTGAAAAACCGATGGGTTGCCAAACACCAGAGGGTGAAGAAGAATTCCGGAAAAGATATGAGAGCTGGGATGATCCAGAGGTACCAAAATTTCATTATGGTTCACATTATTCAAGTGCTGGGATTGTTCTCTTCTATCTTCTCCGCCTACCACCATTCAGTGCTGAGAATCAGAAGCTACAGGGAGGTCAATTTGATCATGCTGATCGTCTTTTCAATAGTGTTGGAGATACTTGGTTAAGTGCAGCTGGAAAGGGAAACACATCAGATGTGAAAGAGTTGATTCCAGAATTTTTCTACATGCCAGAATTCCTAGAAAATCGTTTCAATCTGGATTTGGGAGAGAAACAGTCGGGAGAGAAGGTTGGTGATGTTGGTTTACCTCCTTGGGCTAAAGGCAGTGTTAGGGAGTTCATCAGAAAGCATAGGGAGGCACTGGAATCTGATTATGTTTCAGAAAACTTGCATCATTGGATAGATCTCATCTTTGGATATAAACAAAGAGGGAAGGCGGCTGAGGAAGCTGTGAATGTCTTTTATCACTACACATATGAGGGCAGTGTGGACATCGACTCAGTTACAGATCCTGCCATGAAAGCCTCAATTCTAGCACAAATTAATCATTTTGGGCAGACACCCAAACAGTTATTTCTCAAACCCCATGTCAAAAGGCAGGTTGACAGAAGGCTTCCTCATCCACTCAAGTACTCGAACCATCTTGTTCCGCATGAGATCCGCAAGACTACGTCTTCCATAACTCAGATTGTTACTGTCAATGAGAAAATCCTAGTGGCAGGAACAAATTGTTTGCTAAAACCAAGAACATATACCAAGTACGTCGCATGGGGTTTTCCTGATCGTAGCTTGAGAATTATGAGTTATGATCAAGATCGACTGGTCTCCACACATGAGAATCTTCATGGGGGAAACCAGATTCAGTGCACTGGTGTGAGCCATGATGGTCAGATTCTGGTGACTGGGGCTGATGATGGCCTAGTTTCTGTTTGGAGAATCAGCAAGTATGGTCCCCGTGTCATGAGACGCTTACAGCTGGAGAAGGCACTTTGTGCCCACACATCCAAAATCACATGCCTTCATGTTAGCCAGCCTTACATGCTGATTGTGAGTGGATCAGATGACTGCACTGTCGTTATATGGGATCTCAGCTCCTTGGTTTTTGTTAGGCAGCTCCCTGAGTTCCCAACACCGATATCTGCAATTTATGTGAATGATTTGACTGGGGATATTGTGACGGCAGCTGGGATTTTGCTTGCTGTTTGGAGCATTAATGGGGACTGCCTTGCAATGGTTAACACGTCCCAACTGCCTTCTGATTCAATTCTTTCCGTGACAAGCAGTTCATATTCTGATTGGCTGGATACAAACTGGTTTGTAACGGGTCATCAGAGTGGGGCTGTTAAGGTGTGGCAAATGGTGCACCACTCTAACCGTGAGGGTTACCAACAGAAGTCAACTAGCAATGGAACGGTTGGTTTAAATCTCAGTGATAAGGCTCCAGAGTACAAGTTGGTGCTCCACAAGGTACTGAAGTATCATAAGCATCCTGTTACTGCCCTTCACCTTACGGTTGACCTAAGGCAGTTACTAAGTGGTGATTCTGGCGGGCATTTGCTTTCATGGACACTGCAAGATGAGAGCTTGAAAGCTATTCAGGGGTGA

Protein Analysis

3607

Amino Acids

401.53

Weight (kDa)

5.72

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arm_4 PF23295 788 - 1002 9.4e-06 Armadillo-like repeats
PH_BEACH PF14844 2905 - 2954 5.2e-07 PH domain associated with Beige/BEACH
Beach PF02138 2993 - 3272 6e-120 Beige/BEACH domain
WD40_CDC20-Fz PF24807 3297 - 3461 1.3e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 3325 - 3550 1.7e-16 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 3325 - 3456 1.8e-11 THOC3 beta-propeller domain
WD40_Prp19 PF24814 3325 - 3475 3.5e-10 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 3325 - 3439 3.5e-06 Echinoderm microtubule-associated protein second beta-propeller
NBCH_WD40 PF20426 3326 - 3487 3.4e-12 Neurobeachin beta propeller domain
WDR55 PF24796 3334 - 3526 1.3e-06 WDR55
Beta-prop_TEP1_2nd PF25047 3348 - 3490 1.2e-08 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 3356 - 3525 1.9e-12 WDR3 first beta-propeller domain
WD40 PF00400 3401 - 3435 5.3e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2621, 8085
AarI CACCTGC 2 cut(s) 3564, 7636
AasI GACNNNNNNGTC 2 cut(s) 4543, 10289
AatII GACGTC 2 cut(s) 4213, 6742
Acc16I TGCGCA 1 cut(s) 4656
Acc36I ACCTGC 6 cut(s) 3564, 3712, 7332, 7636, 8709, 9808
Acc65I GGTACC 2 cut(s) 4103, 9226
AccB1I GGYRCC 2 cut(s) 4103, 9226
AccB7I CCANNNNNTGG 5 cut(s) 784, 3305, 4205, 4274, 7515
AccBSI CCGCTC 3 cut(s) 3424, 3783, 5843
AccI GTMKAC 7 cut(s) 1445, 2532, 4529, 7694, 8170, 8233, 9142
AccII CGCG 3 cut(s) 1716, 5681, 7791
AccIII TCCGGA 2 cut(s) 7831, 9192
AcoI YGGCCR 2 cut(s) 6922, 8865
AcyI GRCGYC 3 cut(s) 2786, 4210, 6739
AdeI CACNNNGTG 1 cut(s) 10211
AflII CTTAAG 1 cut(s) 53
AflIII ACRYGT 4 cut(s) 1497, 5011, 8718, 10458
AhdI GACNNNNNGTC 1 cut(s) 6163
AhlI ACTAGT 3 cut(s) 883, 6419, 8147
AjiI CACGTC 3 cut(s) 1498, 9044, 10461
AjuI GAANNNNNNNTTGG 4 cut(s) 6304, 6336, 8876, 8908
AleI CACNNNNGTG 2 cut(s) 1754, 10091
Alw21I GWGCWC 7 cut(s) 965, 3810, 4360, 8454, 10088, 10584, 10680
Alw44I GTGCAC 2 cut(s) 10084, 10580
AlwNI CAGNNNCTG 7 cut(s) 125, 3305, 5714, 6866, 8548, 9731, 10114
Ama87I CYCGRG 6 cut(s) 1736, 2230, 5311, 5337, 6218, 6881
Aor13HI TCCGGA 2 cut(s) 7831, 9192
ApaLI GTGCAC 2 cut(s) 10084, 10580
ArsI GACNNNNNNTTYG 2 cut(s) 9792, 9824
AseI ATTAAT 2 cut(s) 9762, 10431
Asp700I GAANNNNTTC 4 cut(s) 645, 1539, 3442, 8477
Asp718I GGTACC 2 cut(s) 4103, 9226
AspA2I CCTAGG 1 cut(s) 8251
AspLEI GCGC 6 cut(s) 793, 1716, 2406, 4657, 4881, 7791
AsuC2I CCSGG 4 cut(s) 4403, 4534, 5338, 5339
AsuII TTCGAA 6 cut(s) 2706, 3103, 3392, 5107, 8373, 8517
AvaI CYCGRG 6 cut(s) 1736, 2230, 5311, 5337, 6218, 6881
AvaII GGWCC 8 cut(s) 1262, 3735, 3778, 6545, 6792, 6876, 7859, 10169
AvrII CCTAGG 1 cut(s) 8251
AxyI CCTNAGG 4 cut(s) 1107, 2240, 3814, 10739
BaeGI GKGCMC 5 cut(s) 5768, 8615, 10088, 10216, 10584
BaeI ACNNNNGTAYC 6 cut(s) 6018, 6051, 10679, 10679, 10712, 10712
BalI TGGCCA 1 cut(s) 8867
BamHI GGATCC 3 cut(s) 11, 4625, 7828
BanI GGYRCC 2 cut(s) 4103, 9226
BanII GRGCYC 4 cut(s) 3029, 3864, 6225, 8454
BarI GAAGNNNNNNTAC 4 cut(s) 8154, 8186, 8744, 8776
BauI CACGAG 3 cut(s) 2940, 3419, 3784
BbsI GAAGAC 7 cut(s) 853, 929, 3366, 4205, 4989, 6458, 9885
Bbv12I GWGCWC 7 cut(s) 965, 3810, 4360, 8454, 10088, 10584, 10680
BbvCI CCTCAGC 2 cut(s) 6872, 9660
BceAI ACGGC 4 cut(s) 205, 4866, 8928, 10413
BcgI CGANNNNNNTGC 4 cut(s) 831, 865, 6324, 6358
BciVI GTATCC 7 cut(s) 4400, 7138, 7222, 7606, 8373, 9041, 10516
BclI TGATCA 4 cut(s) 2259, 8539, 9340, 10027
BcnI CCSGG 4 cut(s) 4403, 4534, 5338, 5339
BcuI ACTAGT 3 cut(s) 883, 6419, 8147
BfrI CTTAAG 1 cut(s) 53
BfuAI ACCTGC 6 cut(s) 3564, 3712, 7332, 7636, 8709, 9808
BfuI GTATCC 7 cut(s) 4400, 7138, 7222, 7606, 8373, 9041, 10516
BglI GCCNNNNNGGC 1 cut(s) 3409
BglII AGATCT 6 cut(s) 1232, 3287, 3877, 6377, 8243, 9622
BlnI CCTAGG 1 cut(s) 8251
BmcAI AGTACT 3 cut(s) 6424, 7491, 9851
Bme18I GGWCC 8 cut(s) 1262, 3735, 3778, 6545, 6792, 6876, 7859, 10169
BmeRI GACNNNNNGTC 1 cut(s) 6163
BmeT110I CYCGRG 6 cut(s) 1736, 2230, 5311, 5337, 6218, 6881
BmgBI CACGTC 3 cut(s) 1498, 9044, 10461
BmrI ACTGGG 3 cut(s) 7648, 10131, 10392
BmuI ACTGGG 3 cut(s) 7648, 10131, 10392
BpiI GAAGAC 7 cut(s) 853, 929, 3366, 4205, 4989, 6458, 9885
BplI GAGNNNNNCTC 2 cut(s) 5882, 5914
Bpu10I CCTNAGC 6 cut(s) 1127, 1770, 2898, 6710, 6872, 9660
Bpu14I TTCGAA 6 cut(s) 2706, 3103, 3392, 5107, 8373, 8517
BpuMI CCSGG 4 cut(s) 4403, 4534, 5338, 5339
BsaBI GATNNNNATC 5 cut(s) 1026, 2223, 4227, 7163, 10032
BsaHI GRCGYC 3 cut(s) 2786, 4210, 6739
BsaI GGTCTC 6 cut(s) 3277, 4706, 6962, 7272, 8217, 10048
BsaWI WCCGGW 3 cut(s) 258, 7831, 9192
Bse118I RCCGGY 1 cut(s) 6325
Bse21I CCTNAGG 4 cut(s) 1107, 2240, 3814, 10739
Bse3DI GCAATG 5 cut(s) 47, 4247, 7695, 10455, 10630
Bse8I GATNNNNATC 5 cut(s) 1026, 2223, 4227, 7163, 10032
BseAI TCCGGA 2 cut(s) 7831, 9192
BseJI GATNNNNATC 5 cut(s) 1026, 2223, 4227, 7163, 10032
BseMI GCAATG 5 cut(s) 47, 4247, 7695, 10455, 10630
BseRI GAGGAG 4 cut(s) 3581, 4622, 4805, 8858
BseSI GKGCMC 5 cut(s) 5768, 8615, 10088, 10216, 10584
BseYI CCCAGC 4 cut(s) 7217, 9210, 9263, 10403
Bsh1236I CGCG 3 cut(s) 1716, 5681, 7791
Bsh1285I CGRYCG 1 cut(s) 1483
BshNI GGYRCC 2 cut(s) 4103, 9226
BsiEI CGRYCG 1 cut(s) 1483
BsiHKAI GWGCWC 7 cut(s) 965, 3810, 4360, 8454, 10088, 10584, 10680
BsiHKCI CYCGRG 6 cut(s) 1736, 2230, 5311, 5337, 6218, 6881
BsiSI CCGG 8 cut(s) 259, 4402, 4534, 5338, 6326, 6558, 7832, 9193
BsiWI CGTACG 1 cut(s) 7294
BsmBI CGTCTC 2 cut(s) 6746, 10177
BsmI GAATGC 2 cut(s) 1764, 3111
Bso31I GGTCTC 6 cut(s) 3277, 4706, 6962, 7272, 8217, 10048
BsoBI CYCGRG 6 cut(s) 1736, 2230, 5311, 5337, 6218, 6881
Bsp119I TTCGAA 6 cut(s) 2706, 3103, 3392, 5107, 8373, 8517
Bsp13I TCCGGA 2 cut(s) 7831, 9192
Bsp1407I TGTACA 5 cut(s) 2844, 3595, 3834, 4109, 6080
Bsp19I CCATGG 4 cut(s) 1150, 5085, 8261, 9080
BspEI TCCGGA 2 cut(s) 7831, 9192
BspFNI CGCG 3 cut(s) 1716, 5681, 7791
BspHI TCATGA 6 cut(s) 670, 5253, 5947, 7783, 8740, 10179
BspMAI CTGCAG 5 cut(s) 2907, 4068, 4174, 5719, 7182
BspMI ACCTGC 6 cut(s) 3564, 3712, 7332, 7636, 8709, 9808
BspQI GCTCTTC 6 cut(s) 189, 397, 3869, 4365, 7996, 8635
BspT104I TTCGAA 6 cut(s) 2706, 3103, 3392, 5107, 8373, 8517
BspT107I GGYRCC 2 cut(s) 4103, 9226
BspTI CTTAAG 1 cut(s) 53
BspTNI GGTCTC 6 cut(s) 3277, 4706, 6962, 7272, 8217, 10048
BsrBI CCGCTC 3 cut(s) 3424, 3783, 5843
BsrDI GCAATG 5 cut(s) 47, 4247, 7695, 10455, 10630
BsrFI RCCGGY 1 cut(s) 6325
BsrGI TGTACA 5 cut(s) 2844, 3595, 3834, 4109, 6080
BssAI RCCGGY 1 cut(s) 6325
BssNAI GTATAC 2 cut(s) 4530, 8234
BssNI GRCGYC 3 cut(s) 2786, 4210, 6739
BssSI CACGAG 3 cut(s) 2940, 3419, 3784
Bst1107I GTATAC 2 cut(s) 4530, 8234
Bst2BI CACGAG 3 cut(s) 2940, 3419, 3784
BstACI GRCGYC 3 cut(s) 2786, 4210, 6739
BstAFI CTTAAG 1 cut(s) 53
BstAPI GCANNNNNTGC 3 cut(s) 3534, 10211, 10579
BstAUI TGTACA 5 cut(s) 2844, 3595, 3834, 4109, 6080
BstBI TTCGAA 6 cut(s) 2706, 3103, 3392, 5107, 8373, 8517
BstDSI CCRYGG 6 cut(s) 1150, 5085, 5478, 6402, 8261, 9080
BstEII GGTNACC 2 cut(s) 5816, 10601
BstENI CCTNNNNNAGG 1 cut(s) 3188
BstFNI CGCG 3 cut(s) 1716, 5681, 7791
BstHHI GCGC 6 cut(s) 793, 1716, 2406, 4657, 4881, 7791
BstMCI CGRYCG 1 cut(s) 1483
BstPI GGTNACC 2 cut(s) 5816, 10601
BstSLI GKGCMC 5 cut(s) 5768, 8615, 10088, 10216, 10584
BstUI CGCG 3 cut(s) 1716, 5681, 7791
BstV2I GAAGAC 7 cut(s) 853, 929, 3366, 4205, 4989, 6458, 9885
BstXI CCANNNNNNTGG 5 cut(s) 2059, 2498, 3908, 7225, 8336
BstZ17I GTATAC 2 cut(s) 4530, 8234
Bsu36I CCTNAGG 4 cut(s) 1107, 2240, 3814, 10739
BsuI GTATCC 7 cut(s) 4400, 7138, 7222, 7606, 8373, 9041, 10516
BtgI CCRYGG 6 cut(s) 1150, 5085, 5478, 6402, 8261, 9080
BtgZI GCGATG 1 cut(s) 2210
BtrI CACGTC 3 cut(s) 1498, 9044, 10461
BveI ACCTGC 6 cut(s) 3564, 3712, 7332, 7636, 8709, 9808
CaiI CAGNNNCTG 7 cut(s) 125, 3305, 5714, 6866, 8548, 9731, 10114
CciI TCATGA 6 cut(s) 670, 5253, 5947, 7783, 8740, 10179
CfoI GCGC 6 cut(s) 793, 1716, 2406, 4657, 4881, 7791
Cfr10I RCCGGY 1 cut(s) 6325
Cfr9I CCCGGG 1 cut(s) 5337
CseI GACGC 4 cut(s) 2775, 4421, 8759, 10194
CspCI CAANNNNNGTGG 4 cut(s) 4, 39, 2721, 2756
DraI TTTAAA 4 cut(s) 1615, 1728, 1827, 10641
DraIII CACNNNGTG 1 cut(s) 10211
DrdI GACNNNNNNGTC 2 cut(s) 4543, 10289
DriI GACNNNNNGTC 1 cut(s) 6163
DseDI GACNNNNNNGTC 2 cut(s) 4543, 10289
EaeI YGGCCR 2 cut(s) 6922, 8865
Eam1105I GACNNNNNGTC 1 cut(s) 6163
EciI GGCGGA 1 cut(s) 9278
Ecl136II GAGCTC 1 cut(s) 8452
Eco147I AGGCCT 2 cut(s) 1105, 8415
Eco24I GRGCYC 4 cut(s) 3029, 3864, 6225, 8454
Eco31I GGTCTC 6 cut(s) 3277, 4706, 6962, 7272, 8217, 10048
Eco32I GATATC 3 cut(s) 1297, 7165, 10356
Eco47I GGWCC 8 cut(s) 1262, 3735, 3778, 6545, 6792, 6876, 7859, 10169
Eco53kI GAGCTC 1 cut(s) 8452
Eco81I CCTNAGG 4 cut(s) 1107, 2240, 3814, 10739
Eco88I CYCGRG 6 cut(s) 1736, 2230, 5311, 5337, 6218, 6881
Eco91I GGTNACC 2 cut(s) 5816, 10601
EcoICRI GAGCTC 1 cut(s) 8452
EcoNI CCTNNNNNAGG 1 cut(s) 3188
EcoO109I RGGNCCY 3 cut(s) 557, 3735, 6876
EcoO65I GGTNACC 2 cut(s) 5816, 10601
EcoRI GAATTC 6 cut(s) 3711, 6043, 6428, 8513, 9188, 9452
EcoRV GATATC 3 cut(s) 1297, 7165, 10356
EcoT22I ATGCAT 4 cut(s) 1273, 5670, 6997, 9024
EcoT38I GRGCYC 4 cut(s) 3029, 3864, 6225, 8454
Esp3I CGTCTC 2 cut(s) 6746, 10177
FauI CCCGC 1 cut(s) 10760
FauNDI CATATG 2 cut(s) 1437, 9694
FbaI TGATCA 4 cut(s) 2259, 8539, 9340, 10027
FblI GTMKAC 7 cut(s) 1445, 2532, 4529, 7694, 8170, 8233, 9142
FriOI GRGCYC 4 cut(s) 3029, 3864, 6225, 8454
FspI TGCGCA 1 cut(s) 4656
GlaI GCGC 6 cut(s) 792, 1715, 2405, 4656, 4880, 7790
GsaI CCCAGC 4 cut(s) 7221, 9214, 9267, 10407
HapII CCGG 8 cut(s) 259, 4402, 4534, 5338, 6326, 6558, 7832, 9193
HgaI GACGC 4 cut(s) 2775, 4421, 8759, 10194
HhaI GCGC 6 cut(s) 793, 1716, 2406, 4657, 4881, 7791
Hin1I GRCGYC 3 cut(s) 2786, 4210, 6739
Hin6I GCGC 6 cut(s) 791, 1714, 2404, 4655, 4879, 7789
HinP1I GCGC 6 cut(s) 791, 1714, 2404, 4655, 4879, 7789
HincII GTYRAC 8 cut(s) 531, 855, 3768, 8598, 9823, 10456, 10617, 10735
HindII GTYRAC 8 cut(s) 531, 855, 3768, 8598, 9823, 10456, 10617, 10735
HindIII AAGCTT 8 cut(s) 1856, 2078, 3977, 4082, 4497, 4788, 5989, 7880
HpaI GTTAAC 1 cut(s) 10456
HpaII CCGG 8 cut(s) 259, 4402, 4534, 5338, 6326, 6558, 7832, 9193
Hpy99I CGWCG 3 cut(s) 729, 7584, 9986
Hsp92I GRCGYC 3 cut(s) 2786, 4210, 6739
HspAI GCGC 6 cut(s) 791, 1714, 2404, 4655, 4879, 7789
KflI GGGWCCC 1 cut(s) 3735
Kpn2I TCCGGA 2 cut(s) 7831, 9192
KpnI GGTACC 2 cut(s) 4107, 9230
Ksp22I TGATCA 4 cut(s) 2259, 8539, 9340, 10027
KspAI GTTAAC 1 cut(s) 10456
LguI GCTCTTC 6 cut(s) 189, 397, 3869, 4365, 7996, 8635
MbiI CCGCTC 3 cut(s) 3424, 3783, 5843
MfeI CAATTG 4 cut(s) 2304, 6905, 7068, 7851
MlsI TGGCCA 1 cut(s) 8867
MluNI TGGCCA 1 cut(s) 8867
MmeI TCCRAC 8 cut(s) 1902, 3142, 4603, 4730, 5484, 6061, 8874, 9349
Mox20I TGGCCA 1 cut(s) 8867
Mph1103I ATGCAT 4 cut(s) 1273, 5670, 6997, 9024
MroI TCCGGA 2 cut(s) 7831, 9192
MroXI GAANNNNTTC 4 cut(s) 645, 1539, 3442, 8477
MscI TGGCCA 1 cut(s) 8867
MslI CAYNNNNRTG 7 cut(s) 915, 1754, 2540, 7395, 8334, 10091, 10551
Msp20I TGGCCA 1 cut(s) 8867
MspCI CTTAAG 1 cut(s) 53
MspI CCGG 8 cut(s) 259, 4402, 4534, 5338, 6326, 6558, 7832, 9193
MunI CAATTG 4 cut(s) 2304, 6905, 7068, 7851
Mva1269I GAATGC 2 cut(s) 1764, 3111
MvnI CGCG 3 cut(s) 1716, 5681, 7791
NciI CCSGG 4 cut(s) 4403, 4534, 5338, 5339
NcoI CCATGG 4 cut(s) 1150, 5085, 8261, 9080
NdeI CATATG 2 cut(s) 1437, 9694
NsbI TGCGCA 1 cut(s) 4656
NsiI ATGCAT 4 cut(s) 1273, 5670, 6997, 9024
NspV TTCGAA 6 cut(s) 2706, 3103, 3392, 5107, 8373, 8517
OliI CACNNNNGTG 2 cut(s) 1754, 10091
PaeI GCATGC 5 cut(s) 341, 2510, 3260, 5440, 7745
PaeR7I CTCGAG 3 cut(s) 1736, 5311, 6881
PagI TCATGA 6 cut(s) 670, 5253, 5947, 7783, 8740, 10179
PaqCI CACCTGC 2 cut(s) 3564, 7636
PasI CCCWGGG 1 cut(s) 3277
PceI AGGCCT 2 cut(s) 1105, 8415
PciI ACATGT 2 cut(s) 5011, 8718
PciSI GCTCTTC 6 cut(s) 189, 397, 3869, 4365, 7996, 8635
PcsI WCGNNNNNNNCGW 3 cut(s) 4207, 6745, 7282
PctI GAATGC 2 cut(s) 1764, 3111
PdmI GAANNNNTTC 4 cut(s) 645, 1539, 3442, 8477
Pfl23II CGTACG 1 cut(s) 7294
PflFI GACNNNGTC 1 cut(s) 9889
PflMI CCANNNNNTGG 5 cut(s) 784, 3305, 4205, 4274, 7515
Ple19I CGATCG 1 cut(s) 1483
PpuMI RGGWCCY 2 cut(s) 3735, 6876
PscI ACATGT 2 cut(s) 5011, 8718
PshBI ATTAAT 2 cut(s) 9762, 10431
PsiI TTATAA 2 cut(s) 2621, 8085
Psp124BI GAGCTC 1 cut(s) 8454
Psp5II RGGWCCY 2 cut(s) 3735, 6876
PspEI GGTNACC 2 cut(s) 5816, 10601
PspFI CCCAGC 4 cut(s) 7217, 9210, 9263, 10403
PspLI CGTACG 1 cut(s) 7294
PspPPI RGGWCCY 2 cut(s) 3735, 6876
PspXI VCTCGAGB 2 cut(s) 5311, 6881
PsrI GAACNNNNNNTAC 4 cut(s) 2181, 2213, 8188, 8220
PstI CTGCAG 5 cut(s) 2907, 4068, 4174, 5719, 7182
PstNI CAGNNNCTG 7 cut(s) 125, 3305, 5714, 6866, 8548, 9731, 10114
PsyI GACNNNGTC 1 cut(s) 9889
PvuI CGATCG 1 cut(s) 1483
RseI CAYNNNNRTG 7 cut(s) 915, 1754, 2540, 7395, 8334, 10091, 10551
SacI GAGCTC 1 cut(s) 8454
SapI GCTCTTC 6 cut(s) 189, 397, 3869, 4365, 7996, 8635
ScaI AGTACT 3 cut(s) 6424, 7491, 9851
Sfr274I CTCGAG 3 cut(s) 1736, 5311, 6881
SfuI TTCGAA 6 cut(s) 2706, 3103, 3392, 5107, 8373, 8517
SinI GGWCC 8 cut(s) 1262, 3735, 3778, 6545, 6792, 6876, 7859, 10169
SlaI CTCGAG 3 cut(s) 1736, 5311, 6881
SmaI CCCGGG 1 cut(s) 5339
SmiMI CAYNNNNRTG 7 cut(s) 915, 1754, 2540, 7395, 8334, 10091, 10551
SpeI ACTAGT 3 cut(s) 883, 6419, 8147
SphI GCATGC 5 cut(s) 341, 2510, 3260, 5440, 7745
SseBI AGGCCT 2 cut(s) 1105, 8415
SspI AATATT 3 cut(s) 594, 1620, 7797
SstI GAGCTC 1 cut(s) 8454
StuI AGGCCT 2 cut(s) 1105, 8415
TauI GCSGC 6 cut(s) 293, 3403, 3427, 5684, 5846, 9659
TspGWI ACGGA 9 cut(s) 713, 1678, 2101, 5467, 6391, 6673, 7312, 7703, 10480
TspMI CCCGGG 1 cut(s) 5337
Tth111I GACNNNGTC 1 cut(s) 9889
Van91I CCANNNNNTGG 5 cut(s) 784, 3305, 4205, 4274, 7515
Vha464I CTTAAG 1 cut(s) 53
VneI GTGCAC 2 cut(s) 10084, 10580
VpaK11BI GGWCC 8 cut(s) 1262, 3735, 3778, 6545, 6792, 6876, 7859, 10169
VspI ATTAAT 2 cut(s) 9762, 10431
XagI CCTNNNNNAGG 1 cut(s) 3188
XbaI TCTAGA 5 cut(s) 1229, 4978, 5215, 6302, 7351
XcmI CCANNNNNNNNNTGG 5 cut(s) 662, 3908, 4744, 6400, 9078
XhoI CTCGAG 3 cut(s) 1736, 5311, 6881
XmaI CCCGGG 1 cut(s) 5337
XmaJI CCTAGG 1 cut(s) 8251
XmiI GTMKAC 7 cut(s) 1445, 2532, 4529, 7694, 8170, 8233, 9142
XmnI GAANNNNTTC 4 cut(s) 645, 1539, 3442, 8477
ZraI GACGTC 2 cut(s) 4211, 6740
ZrmI AGTACT 3 cut(s) 6424, 7491, 9851
Zsp2I ATGCAT 4 cut(s) 1273, 5670, 6997, 9024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.