FvH4_2g24840

Protein TRANSPORT INHIBITOR RESPONSE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0011947
Physical Location & Seq
Forward (+)
20212841 .. 20216888
4048 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24840.t1

Sequence Viewer

Length: 1755 bp
ATGCTGAGAATGGCGAGCTCGTTCCCGGAGGAGGTGCTGGAACACGTGTTCTCGTTCCTGCAGTCGGACGGCGACCGGAACTCGATCTCGCTGGTGTGCAAGTCGTGGTACGAGATCGAGCGGTGGTGCAGGAGGAGGATATTCGTCGGGAACTGCTACGCTGTCAGCCCTAGGATTATGATCAGACGGTTCCCAGACGTTAGATCCATCACGCTCAAAGGGAAGCCTCACTTCGCCGACTTCAATCTGGTCCCGGAGGGCTGGGGTGGCTATGTGTACCCCTGGATCGCCGCCATGGCCAGTGCCTATCCGTGGCTGGAAGAGATCAGGCTCAAGAGGATGGTCGTCACCGACGAGAGCTTGGAGCTGATTGCCAAGTCTTTCAAGAATTTCAAGCTGCTTGTGCTTTCGTCCTGTGAGGGGTTCAGCACTGATGGCCTGGCCTCCATTGCCGCTAATTGCAGGAATTTGCGGGAGTTGGACTTGCATGACAGTGATGTGGAGGACCTAAGTGGGCATTGGCTGAGCCATTTTCCTGATACCTACACGTCACTTGTCTCTCTTAACATTGCATGCTTGGGTTCTGAGGTTAGTTTCTCTGCCCTGGAGCGCCTGGTGGGTAGGTGTCCCAACCTGAGGAGTCTCAGGCTCAACCGTGCAGTGCCCCTTGACAAGCTATCCAATCTACTTAACCGTGCGCCTCAGCTGGATGAGTTGGGGACAGGGGCCTCCTCAGCTGAGTTGCGGCCTGATGTCTTGTCAAACTTATCAGGTGCCCTCTCGGCCTGCAAGGAACTCAAGAGCCTGTCTTGGTTTTGGGATGTGGTTCCAACTTATCTTTCAGCTGTGTATTCTATATGCCCTGGCTTAACTTCGCTGAATTTGAGCTACGCCATTATCCAAAGTCCTGACCTTATTAAGCTTGTTAGCCAATGCCCAAATTTGCAGCGCCTTTGGGTATTGGATTACATTGAAGATGTCGGCCTTGATGCCTTGGCGGCGTCTTGCAAGGATCTGCGAGAGTTGAGGGTGTTTCCATCTGATCCATATGTGTTGGAAGCAAATGTGTCCTTGACAGAACAAGGCCTCATTTCTGTTTCCGAGGGTTGTCCAAAGCTACAGTCAGTTCTGTACTTCTGCCGCCAAATGTCTAATGACGCCTTGATCACCATTGCCAGGAATCAACCCAACTTTACTTGTTTTCGCCTTTGTATAATCGAGCCCCGAACTCCTGATTATCTTACTCGTGAGCCACTTGATGTGGGTTTCGGGGCCATTGTTGAGCGTTGCAAAGATCTCCGGCGCCTGTCTGTTTCTGGTCTGTTAACTGATCGTGCATTTGAGTACATTGGAACTTATGGCAAAAAGTTGGAGATGCTTTCAGTAGCCTTTGCTGGAGAGAGTGACTTGGGACTTCATCATGTGCTGTCGGGTTGTGATAATCTTCGGAAACTTGAGATTAGGGACTGTCCTTTTGGTGATAAGGCGCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCTTCTTGCTCAGTGAGTTATGGAGCATGTAAGCTGCTAGGTCAGAAGTTGCCCCGGCTTAATGTTGAAGTTATTGACGAGAGGGGACACCCAGAATTGAGGCCAGAGAGCTGTCCTGTTGAGAAGCTCTATATATACAGGTCTGTTGCTGGTCCAAGGTTTGACATGCCTGGCTTTATTTGGACCATGGATGAACACTCTGCAGTGAGGCTCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0000822 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0008144 GO:0008150 GO:0008152 GO:0009267 GO:0009555 GO:0009605 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0009991 GO:0010011 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010152 GO:0010311 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0016567 GO:0016740 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031461 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0032446 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033554 GO:0036094 GO:0036211 GO:0038023 GO:0038198 GO:0042221 GO:0042562 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045013 GO:0045014 GO:0045892 GO:0045934 GO:0045990 GO:0046015 GO:0048229 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060089 GO:0060255 GO:0061458 GO:0061984 GO:0061985 GO:0061986 GO:0065007 GO:0070647 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071496 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1905393 GO:1990234 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box F-box-like LRR_6

Protein Analysis

585

Amino Acids

65.57

Weight (kDa)

5.96

Isoelectric Point (pI)

47.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 6 - 45 2.5e-18 F-box
F-box-like PF12937 9 - 39 4e-07 F-box-like
Transp_inhibit PF18791 65 - 111 9.2e-27 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62980
fragaria_vesca FvH4_2g24840
malus_domestica MD03G1276700.v1.1 MD11G1299000.v1.1
prunus_persica Prupe.8G253300_v2.0.a1
pyrus_communis pycom03g22040 pycom10g25620 pycom11g26270 pycom17g00400
rosa_chinensis RchiOBHm_Chr6g0292661
rosa_laevigata RLG00000011999
rosa_multiflora Rmu_sc0000515.1_g000020
rosa_roxburghii Rroxscaffold_7G00174780
rosa_rugosa Rorug06G0228900
rosa_samantha Rh6AG342200 Rh6BG349500 Rh6CG356400 Rh6DG342500
rosa_wichuraiana Rw6G029830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 773, 1302
AccBSI CCGCTC 1 cut(s) 121
AciI CCGC 7 cut(s) 121, 291, 453, 472, 745, 998, 1141
AclWI GGATC 5 cut(s) 198, 293, 1020, 1037, 1518
AcoI YGGCCR 2 cut(s) 297, 1494
AcsI RAATTY 4 cut(s) 388, 466, 880, 940
AcvI CACGTG 1 cut(s) 46
AcyI GRCGYC 3 cut(s) 1001, 1158, 1303
AfaI GTAC 4 cut(s) 110, 278, 1133, 1346
AfiI CCNNNNNNNGG 6 cut(s) 31, 64, 312, 420, 636, 1176
AflIII ACRYGT 3 cut(s) 43, 45, 546
AgsI TTSAA 5 cut(s) 244, 385, 394, 974, 1604
AjiI CACGTC 1 cut(s) 549
AjnI CCWGG 7 cut(s) 281, 438, 603, 612, 862, 1175, 1705
AjuI GAANNNNNNNTTGG 2 cut(s) 823, 855
AloI GAACNNNNNNTCC 2 cut(s) 32, 64
Alw21I GWGCWC 1 cut(s) 20
Alw26I GTCTC 3 cut(s) 562, 647, 1508
AlwI GGATC 5 cut(s) 198, 293, 1020, 1037, 1518
ApeKI GCWGC 4 cut(s) 397, 946, 1502, 1570
ApoI RAATTY 4 cut(s) 388, 466, 880, 940
ArsI GACNNNNNNTTYG 4 cut(s) 1106, 1138, 1457, 1489
AspA2I CCTAGG 1 cut(s) 170
AspLEI GCGC 5 cut(s) 612, 700, 951, 1305, 1489
AspS9I GGNCC 6 cut(s) 250, 505, 726, 1272, 1688, 1719
AsuC2I CCSGG 3 cut(s) 26, 254, 1591
AsuHPI GGTGA 3 cut(s) 340, 1159, 1490
AvaII GGWCC 4 cut(s) 250, 505, 1688, 1719
AvrII CCTAGG 1 cut(s) 170
AxyI CCTNAGG 1 cut(s) 635
BaeGI GKGCMC 2 cut(s) 666, 778
BalI TGGCCA 2 cut(s) 299, 1496
BanI GGYRCC 2 cut(s) 773, 1302
BanII GRGCYC 2 cut(s) 20, 1224
BauI CACGAG 1 cut(s) 1245
BbrPI CACGTG 1 cut(s) 46
BbsI GAAGAC 1 cut(s) 1530
Bbv12I GWGCWC 1 cut(s) 20
BbvCI CCTCAGC 2 cut(s) 702, 733
BbvI GCAGC 4 cut(s) 384, 958, 1489, 1557
BccI CCATC 4 cut(s) 215, 334, 428, 1045
BceAI ACGGC 1 cut(s) 85
BciT130I CCWGG 7 cut(s) 283, 440, 605, 614, 864, 1177, 1707
BclI TGATCA 2 cut(s) 180, 1164
BcnI CCSGG 3 cut(s) 26, 254, 1591
BcoDI GTCTC 3 cut(s) 562, 647, 1508
BfaI CTAG 2 cut(s) 171, 1574
BfmI CTRYAG 3 cut(s) 59, 1118, 1737
BfoI RGCGCY 4 cut(s) 613, 952, 1306, 1490
BglI GCCNNNNNGGC 3 cut(s) 296, 782, 998
BglII AGATCT 1 cut(s) 1294
BisI GCNGC 9 cut(s) 291, 398, 453, 746, 947, 999, 1141, 1503, 1571
BlnI CCTAGG 1 cut(s) 170
BlpI GCTNAGC 1 cut(s) 524
BlsI GCNGC 9 cut(s) 292, 399, 454, 747, 948, 1000, 1142, 1504, 1572
Bme18I GGWCC 4 cut(s) 250, 505, 1688, 1719
BmgBI CACGTC 1 cut(s) 549
BmgT120I GGNCC 6 cut(s) 250, 505, 726, 1272, 1688, 1719
BmiI GGNNCC 7 cut(s) 191, 252, 727, 775, 828, 1273, 1304
BmsI GCATC 2 cut(s) 979, 1365
BpiI GAAGAC 1 cut(s) 1530
BpmI CTGGAG 3 cut(s) 626, 1416, 1532
Bpu10I CCTNAGC 2 cut(s) 702, 733
Bpu1102I GCTNAGC 1 cut(s) 524
BpuEI CTTGAG 3 cut(s) 317, 782, 1475
BpuMI CCSGG 3 cut(s) 26, 254, 1591
BsaAI YACGTR 1 cut(s) 46
BsaBI GATNNNNATC 1 cut(s) 179
BsaHI GRCGYC 3 cut(s) 1001, 1158, 1303
BsaWI WCCGGW 1 cut(s) 75
Bsc4I CCNNNNNNNGG 6 cut(s) 31, 64, 312, 420, 636, 1176
Bse1I ACTGG 1 cut(s) 300
Bse21I CCTNAGG 1 cut(s) 635
Bse3DI GCAATG 3 cut(s) 447, 567, 1170
Bse8I GATNNNNATC 1 cut(s) 179
BseBI CCWGG 7 cut(s) 283, 440, 605, 614, 864, 1177, 1707
BseGI GGATG 5 cut(s) 345, 715, 826, 1539, 1732
BseJI GATNNNNATC 1 cut(s) 179
BseLI CCNNNNNNNGG 6 cut(s) 31, 64, 312, 420, 636, 1176
BseMI GCAATG 3 cut(s) 447, 567, 1170
BseMII CTCAG 8 cut(s) 515, 576, 626, 658, 716, 729, 747, 1560
BseNI ACTGG 1 cut(s) 300
BseRI GAGGAG 4 cut(s) 44, 148, 652, 721
BseSI GKGCMC 2 cut(s) 666, 778
BseXI GCAGC 4 cut(s) 384, 958, 1489, 1557
BseYI CCCAGC 1 cut(s) 261
BsgI GTGCAG 2 cut(s) 148, 678
Bsh1285I CGRYCG 1 cut(s) 76
BshNI GGYRCC 2 cut(s) 773, 1302
BsiEI CGRYCG 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 20
BsiSI CCGG 5 cut(s) 26, 76, 254, 1300, 1591
BslFI GGGAC 6 cut(s) 236, 612, 733, 1425, 1478, 1635
BslI CCNNNNNNNGG 6 cut(s) 31, 64, 312, 420, 636, 1176
BsmAI GTCTC 3 cut(s) 562, 647, 1508
BsmFI GGGAC 6 cut(s) 236, 612, 733, 1425, 1478, 1635
Bsp1286I GDGCHC 4 cut(s) 20, 666, 778, 1224
Bsp1720I GCTNAGC 1 cut(s) 524
Bsp19I CCATGG 2 cut(s) 294, 1722
BspACI CCGC 7 cut(s) 121, 291, 453, 472, 745, 998, 1141
BspCNI CTCAG 8 cut(s) 516, 577, 627, 657, 715, 730, 746, 1559
BspLI GGNNCC 7 cut(s) 191, 252, 727, 775, 828, 1273, 1304
BspMAI CTGCAG 2 cut(s) 63, 1741
BspPI GGATC 5 cut(s) 198, 293, 1020, 1037, 1518
BspT107I GGYRCC 2 cut(s) 773, 1302
BsrBI CCGCTC 1 cut(s) 121
BsrDI GCAATG 3 cut(s) 447, 567, 1170
BsrI ACTGG 1 cut(s) 300
BssNI GRCGYC 3 cut(s) 1001, 1158, 1303
BssSI CACGAG 1 cut(s) 1245
BssT1I CCWWGG 5 cut(s) 170, 294, 993, 1691, 1722
Bst2BI CACGAG 1 cut(s) 1245
Bst2UI CCWGG 7 cut(s) 283, 440, 605, 614, 864, 1177, 1707
Bst4CI ACNGT 6 cut(s) 189, 494, 656, 695, 1122, 1469
Bst6I CTCTTC 1 cut(s) 315
BstACI GRCGYC 3 cut(s) 1001, 1158, 1303
BstBAI YACGTR 1 cut(s) 46
BstC8I GCNNGC 3 cut(s) 16, 574, 787
BstDSI CCRYGG 3 cut(s) 294, 311, 1722
BstF5I GGATG 5 cut(s) 345, 715, 826, 1539, 1732
BstH2I RGCGCY 4 cut(s) 613, 952, 1306, 1490
BstHHI GCGC 5 cut(s) 612, 700, 951, 1305, 1489
BstMAI GTCTC 3 cut(s) 562, 647, 1508
BstMCI CGRYCG 1 cut(s) 76
BstNI CCWGG 7 cut(s) 283, 440, 605, 614, 864, 1177, 1707
BstNSI RCATGY 3 cut(s) 576, 1566, 1705
BstSFI CTRYAG 3 cut(s) 59, 1118, 1737
BstSLI GKGCMC 2 cut(s) 666, 778
BstV1I GCAGC 4 cut(s) 384, 958, 1489, 1557
BstV2I GAAGAC 1 cut(s) 1530
BstX2I RGATCY 3 cut(s) 203, 1012, 1294
BstYI RGATCY 3 cut(s) 203, 1012, 1294
Bsu36I CCTNAGG 1 cut(s) 635
BtgI CCRYGG 3 cut(s) 294, 311, 1722
BtrI CACGTC 1 cut(s) 549
BtsCI GGATG 5 cut(s) 345, 715, 826, 1539, 1732
BtsI GCAGTG 2 cut(s) 666, 1746
BtsIMutI CAGTG 6 cut(s) 307, 429, 499, 666, 1554, 1746
Cac8I GCNNGC 3 cut(s) 16, 574, 787
CfoI GCGC 5 cut(s) 612, 700, 951, 1305, 1489
Cfr13I GGNCC 6 cut(s) 250, 505, 726, 1272, 1688, 1719
CseI GACGC 2 cut(s) 990, 1166
Csp6I GTAC 4 cut(s) 109, 277, 1132, 1345
CviAII CATG 7 cut(s) 295, 488, 573, 1421, 1563, 1702, 1723
CviQI GTAC 4 cut(s) 109, 277, 1132, 1345
DinI GGCGCC 1 cut(s) 1304
EaeI YGGCCR 2 cut(s) 297, 1494
Eam1104I CTCTTC 1 cut(s) 315
EarI CTCTTC 1 cut(s) 315
Ecl136II GAGCTC 1 cut(s) 18
Eco130I CCWWGG 5 cut(s) 170, 294, 993, 1691, 1722
Eco147I AGGCCT 1 cut(s) 1086
Eco24I GRGCYC 2 cut(s) 20, 1224
Eco47I GGWCC 4 cut(s) 250, 505, 1688, 1719
Eco53kI GAGCTC 1 cut(s) 18
Eco72I CACGTG 1 cut(s) 46
Eco81I CCTNAGG 1 cut(s) 635
EcoICRI GAGCTC 1 cut(s) 18
EcoO109I RGGNCCY 2 cut(s) 505, 726
EcoRII CCWGG 7 cut(s) 281, 438, 603, 612, 862, 1175, 1705
EcoT14I CCWWGG 5 cut(s) 170, 294, 993, 1691, 1722
EcoT38I GRGCYC 2 cut(s) 20, 1224
EgeI GGCGCC 1 cut(s) 1304
EheI GGCGCC 1 cut(s) 1304
ErhI CCWWGG 5 cut(s) 170, 294, 993, 1691, 1722
FaeI CATG 7 cut(s) 298, 491, 576, 1424, 1566, 1705, 1726
FalI AAGNNNNNCTT 2 cut(s) 215, 247
FaqI GGGAC 6 cut(s) 236, 612, 733, 1425, 1478, 1635
FatI CATG 7 cut(s) 294, 487, 572, 1420, 1562, 1701, 1722
FauI CCCGC 1 cut(s) 465
FauNDI CATATG 1 cut(s) 1048
FbaI TGATCA 2 cut(s) 180, 1164
Fnu4HI GCNGC 9 cut(s) 291, 398, 453, 746, 947, 999, 1141, 1503, 1571
FokI GGATG 5 cut(s) 352, 722, 833, 1546, 1739
FriOI GRGCYC 2 cut(s) 20, 1224
Fsp4HI GCNGC 9 cut(s) 291, 398, 453, 746, 947, 999, 1141, 1503, 1571
FspBI CTAG 2 cut(s) 171, 1574
GlaI GCGC 5 cut(s) 611, 699, 950, 1304, 1488
GluI GCNGC 9 cut(s) 291, 398, 453, 746, 947, 999, 1141, 1503, 1571
GsaI CCCAGC 1 cut(s) 265
GsuI CTGGAG 3 cut(s) 626, 1416, 1532
HaeII RGCGCY 4 cut(s) 613, 952, 1306, 1490
HapII CCGG 5 cut(s) 26, 76, 254, 1300, 1591
HgaI GACGC 2 cut(s) 990, 1166
HhaI GCGC 5 cut(s) 612, 700, 951, 1305, 1489
Hin1I GRCGYC 3 cut(s) 1001, 1158, 1303
Hin1II CATG 7 cut(s) 298, 491, 576, 1424, 1566, 1705, 1726
Hin6I GCGC 5 cut(s) 610, 698, 949, 1303, 1487
HinP1I GCGC 5 cut(s) 610, 698, 949, 1303, 1487
HincII GTYRAC 1 cut(s) 1326
HindII GTYRAC 1 cut(s) 1326
HindIII AAGCTT 1 cut(s) 920
HinfI GANTC 2 cut(s) 640, 1180
HpaI GTTAAC 1 cut(s) 1326
HpaII CCGG 5 cut(s) 26, 76, 254, 1300, 1591
HphI GGTGA 3 cut(s) 340, 1159, 1490
Hpy166II GTNNAC 2 cut(s) 277, 1326
Hpy188I TCNGA 7 cut(s) 67, 185, 586, 1042, 1102, 1449, 1581
Hpy188III TCNNGA 8 cut(s) 148, 334, 385, 536, 799, 908, 1232, 1247
Hpy8I GTNNAC 2 cut(s) 277, 1326
Hpy99I CGWCG 2 cut(s) 149, 356
HpyCH4III ACNGT 6 cut(s) 189, 494, 656, 695, 1122, 1469
HpyCH4IV ACGT 3 cut(s) 45, 198, 548
HpySE526I ACGT 3 cut(s) 45, 198, 548
Hsp92I GRCGYC 3 cut(s) 1001, 1158, 1303
Hsp92II CATG 7 cut(s) 298, 491, 576, 1424, 1566, 1705, 1726
HspAI GCGC 5 cut(s) 610, 698, 949, 1303, 1487
KasI GGCGCC 1 cut(s) 1302
Ksp22I TGATCA 2 cut(s) 180, 1164
KspAI GTTAAC 1 cut(s) 1326
LmnI GCTCC 3 cut(s) 364, 607, 1559
Lsp1109I GCAGC 4 cut(s) 384, 958, 1489, 1557
LweI GCATC 2 cut(s) 979, 1365
MaeI CTAG 2 cut(s) 171, 1574
MaeII ACGT 3 cut(s) 45, 198, 548
MaeIII GTNAC 3 cut(s) 346, 549, 1403
MbiI CCGCTC 1 cut(s) 121
MboII GAAGA 4 cut(s) 332, 986, 1436, 1530
MflI RGATCY 3 cut(s) 203, 1012, 1294
MhlI GDGCHC 4 cut(s) 20, 666, 778, 1224
MlsI TGGCCA 2 cut(s) 299, 1496
MluCI AATT 6 cut(s) 388, 457, 466, 880, 940, 1631
MluNI TGGCCA 2 cut(s) 299, 1496
Mly113I GGCGCC 1 cut(s) 1303
MlyI GAGTC 1 cut(s) 649
MmeI TCCRAC 5 cut(s) 45, 459, 854, 1035, 1350
Mox20I TGGCCA 2 cut(s) 299, 1496
MscI TGGCCA 2 cut(s) 299, 1496
MseI TTAA 6 cut(s) 564, 690, 869, 918, 1325, 1596
MslI CAYNNNNRTG 1 cut(s) 492
Msp20I TGGCCA 2 cut(s) 299, 1496
MspA1I CMGCKG 3 cut(s) 706, 737, 845
MspI CCGG 5 cut(s) 26, 76, 254, 1300, 1591
MvaI CCWGG 7 cut(s) 283, 440, 605, 614, 864, 1177, 1707
NarI GGCGCC 1 cut(s) 1303
NciI CCSGG 3 cut(s) 26, 254, 1591
NcoI CCATGG 2 cut(s) 294, 1722
NdeI CATATG 1 cut(s) 1048
NlaIII CATG 7 cut(s) 298, 491, 576, 1424, 1566, 1705, 1726
NlaIV GGNNCC 7 cut(s) 191, 252, 727, 775, 828, 1273, 1304
NmeAIII GCCGAG 1 cut(s) 761
NmuCI GTSAC 3 cut(s) 346, 549, 1403
NspI RCATGY 3 cut(s) 576, 1566, 1705
PaeI GCATGC 1 cut(s) 576
PceI AGGCCT 1 cut(s) 1086
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PfeI GAWTC 1 cut(s) 1180
PfoI TCCNGGA 2 cut(s) 24, 252
PkrI GCNGC 9 cut(s) 292, 399, 454, 747, 948, 1000, 1142, 1504, 1572
PleI GAGTC 1 cut(s) 648
PluTI GGCGCC 1 cut(s) 1306
PmaCI CACGTG 1 cut(s) 46
PmlI CACGTG 1 cut(s) 46
PpsI GAGTC 1 cut(s) 648
Ppu21I YACGTR 1 cut(s) 46
PpuMI RGGWCCY 1 cut(s) 505
Psp124BI GAGCTC 1 cut(s) 20
Psp5II RGGWCCY 1 cut(s) 505
Psp6I CCWGG 7 cut(s) 281, 438, 603, 612, 862, 1175, 1705
PspCI CACGTG 1 cut(s) 46
PspFI CCCAGC 1 cut(s) 261
PspGI CCWGG 7 cut(s) 281, 438, 603, 612, 862, 1175, 1705
PspN4I GGNNCC 7 cut(s) 191, 252, 727, 775, 828, 1273, 1304
PspPI GGNCC 6 cut(s) 250, 505, 726, 1272, 1688, 1719
PspPPI RGGWCCY 1 cut(s) 505
PstI CTGCAG 2 cut(s) 63, 1741
PsuI RGATCY 3 cut(s) 203, 1012, 1294
PvuII CAGCTG 3 cut(s) 706, 737, 845
RsaI GTAC 4 cut(s) 110, 278, 1133, 1346
RsaNI GTAC 4 cut(s) 109, 277, 1132, 1345
RseI CAYNNNNRTG 1 cut(s) 492
SacI GAGCTC 1 cut(s) 20
SaqAI TTAA 6 cut(s) 564, 690, 869, 918, 1325, 1596
SatI GCNGC 9 cut(s) 291, 398, 453, 746, 947, 999, 1141, 1503, 1571
Sau96I GGNCC 6 cut(s) 250, 505, 726, 1272, 1688, 1719
SchI GAGTC 1 cut(s) 649
SduI GDGCHC 4 cut(s) 20, 666, 778, 1224
SfaNI GCATC 2 cut(s) 979, 1365
SfcI CTRYAG 3 cut(s) 59, 1118, 1737
SfoI GGCGCC 1 cut(s) 1304
SinI GGWCC 4 cut(s) 250, 505, 1688, 1719
SmiMI CAYNNNNRTG 1 cut(s) 492
SmlI CTYRAG 3 cut(s) 332, 797, 1454
SmoI CTYRAG 3 cut(s) 332, 797, 1454
SphI GCATGC 1 cut(s) 576
Sse9I AATT 6 cut(s) 388, 457, 466, 880, 940, 1631
SseBI AGGCCT 1 cut(s) 1086
SsiI CCGC 7 cut(s) 121, 291, 453, 472, 745, 998, 1141
SspDI GGCGCC 1 cut(s) 1302
SspMI CTAG 2 cut(s) 171, 1574
SstI GAGCTC 1 cut(s) 20
StuI AGGCCT 1 cut(s) 1086
StyI CCWWGG 5 cut(s) 170, 294, 993, 1691, 1722
TaaI ACNGT 6 cut(s) 189, 494, 656, 695, 1122, 1469
TaiI ACGT 3 cut(s) 48, 201, 551
TaqI TCGA 3 cut(s) 83, 117, 1218
TasI AATT 6 cut(s) 388, 457, 466, 880, 940, 1631
TatI WGTACW 2 cut(s) 1131, 1344
TauI GCSGC 5 cut(s) 293, 455, 748, 1001, 1143
TfiI GAWTC 1 cut(s) 1180
Tru1I TTAA 6 cut(s) 564, 690, 869, 918, 1325, 1596
Tru9I TTAA 6 cut(s) 564, 690, 869, 918, 1325, 1596
TscAI CASTG 6 cut(s) 307, 436, 499, 666, 1554, 1746
TseFI GTSAC 3 cut(s) 346, 549, 1403
TseI GCWGC 4 cut(s) 397, 946, 1502, 1570
Tsp45I GTSAC 3 cut(s) 346, 549, 1403
TspDTI ATGAA 2 cut(s) 1406, 1743
TspGWI ACGGA 1 cut(s) 300
TspRI CASTG 6 cut(s) 307, 436, 499, 666, 1554, 1746
VpaK11BI GGWCC 4 cut(s) 250, 505, 1688, 1719
XapI RAATTY 4 cut(s) 388, 466, 880, 940
XceI RCATGY 3 cut(s) 576, 1566, 1705
XmaJI CCTAGG 1 cut(s) 170
XspI CTAG 2 cut(s) 171, 1574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.