Protein TRANSPORT INHIBITOR RESPONSE
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62980 |
| fragaria_vesca | FvH4_2g24840 |
| malus_domestica | MD03G1276700.v1.1 MD11G1299000.v1.1 |
| prunus_persica | Prupe.8G253300_v2.0.a1 |
| pyrus_communis | pycom03g22040 pycom10g25620 pycom11g26270 pycom17g00400 |
| rosa_chinensis | RchiOBHm_Chr6g0292661 |
| rosa_laevigata | RLG00000011999 |
| rosa_multiflora | Rmu_sc0000515.1_g000020 |
| rosa_roxburghii | Rroxscaffold_7G00174780 |
| rosa_rugosa | Rorug06G0228900 |
| rosa_samantha | Rh6AG342200 Rh6BG349500 Rh6CG356400 Rh6DG342500 |
| rosa_wichuraiana | Rw6G029830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 175 |
| AclWI | GGATC | 1 cut(s) | 372 |
| AcoI | YGGCCR | 1 cut(s) | 348 |
| AcsI | RAATTY | 2 cut(s) | 81, 220 |
| AcuI | CTGAAG | 1 cut(s) | 86 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 30 |
| AflIII | ACRYGT | 1 cut(s) | 50 |
| AjnI | CCWGG | 2 cut(s) | 488, 559 |
| AluBI | AGCT | 4 cut(s) | 307, 364, 424, 517 |
| AluI | AGCT | 4 cut(s) | 307, 364, 424, 517 |
| Alw26I | GTCTC | 1 cut(s) | 362 |
| AlwI | GGATC | 1 cut(s) | 372 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 321 |
| AoxI | GGCC | 5 cut(s) | 126, 348, 430, 491, 542 |
| ApeKI | GCWGC | 2 cut(s) | 356, 424 |
| ApoI | RAATTY | 2 cut(s) | 81, 220 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 311, 343 |
| AseI | ATTAAT | 1 cut(s) | 17 |
| AspA2I | CCTAGG | 1 cut(s) | 545 |
| AspS9I | GGNCC | 3 cut(s) | 126, 542, 573 |
| AsuHPI | GGTGA | 2 cut(s) | 13, 344 |
| AvaII | GGWCC | 1 cut(s) | 573 |
| AvrII | CCTAGG | 1 cut(s) | 545 |
| BalI | TGGCCA | 1 cut(s) | 350 |
| BanII | GRGCYC | 1 cut(s) | 78 |
| BbsI | GAAGAC | 1 cut(s) | 384 |
| BbvI | GCAGC | 2 cut(s) | 343, 411 |
| BccI | CCATC | 1 cut(s) | 173 |
| BciT130I | CCWGG | 2 cut(s) | 490, 561 |
| BcoDI | GTCTC | 1 cut(s) | 362 |
| BfaI | CTAG | 3 cut(s) | 30, 428, 546 |
| BfmI | CTRYAG | 2 cut(s) | 237, 526 |
| BisI | GCNGC | 2 cut(s) | 357, 425 |
| BlnI | CCTAGG | 1 cut(s) | 545 |
| BlsI | GCNGC | 2 cut(s) | 358, 426 |
| Bme1390I | CCNGG | 2 cut(s) | 490, 561 |
| Bme18I | GGWCC | 1 cut(s) | 573 |
| BmgT120I | GGNCC | 3 cut(s) | 126, 542, 573 |
| BmiI | GGNNCC | 2 cut(s) | 127, 208 |
| BmrFI | CCNGG | 2 cut(s) | 490, 561 |
| BmsI | GCATC | 1 cut(s) | 219 |
| BpiI | GAAGAC | 1 cut(s) | 384 |
| BpmI | CTGGAG | 2 cut(s) | 329, 386 |
| BsaJI | CCNNGG | 3 cut(s) | 443, 545, 576 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 218, 248 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 30 |
| Bse3DI | GCAATG | 1 cut(s) | 24 |
| BseBI | CCWGG | 2 cut(s) | 490, 561 |
| BseDI | CCNNGG | 3 cut(s) | 443, 545, 576 |
| BseGI | GGATG | 1 cut(s) | 393 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BseMI | GCAATG | 1 cut(s) | 24 |
| BseMII | CTCAG | 1 cut(s) | 414 |
| BseXI | GCAGC | 2 cut(s) | 343, 411 |
| BshFI | GGCC | 5 cut(s) | 128, 350, 432, 493, 544 |
| BsiSI | CCGG | 3 cut(s) | 154, 249, 494 |
| BslFI | GGGAC | 2 cut(s) | 332, 489 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BsmAI | GTCTC | 1 cut(s) | 362 |
| BsmFI | GGGAC | 2 cut(s) | 332, 489 |
| BsnI | GGCC | 5 cut(s) | 128, 350, 432, 493, 544 |
| Bsp1286I | GDGCHC | 1 cut(s) | 78 |
| Bsp143I | GATC | 3 cut(s) | 184, 312, 377 |
| Bsp19I | CCATGG | 1 cut(s) | 576 |
| BspANI | GGCC | 5 cut(s) | 128, 350, 432, 493, 544 |
| BspCNI | CTCAG | 1 cut(s) | 413 |
| BspLI | GGNNCC | 2 cut(s) | 127, 208 |
| BspPI | GGATC | 1 cut(s) | 372 |
| BsrDI | GCAATG | 1 cut(s) | 24 |
| BssECI | CCNNGG | 3 cut(s) | 443, 545, 576 |
| BssMI | GATC | 3 cut(s) | 184, 312, 377 |
| BssT1I | CCWWGG | 2 cut(s) | 545, 576 |
| Bst2UI | CCWGG | 2 cut(s) | 490, 561 |
| Bst4CI | ACNGT | 1 cut(s) | 323 |
| BstDEI | CTNAG | 1 cut(s) | 400 |
| BstDSI | CCRYGG | 1 cut(s) | 576 |
| BstF5I | GGATG | 1 cut(s) | 393 |
| BstKTI | GATC | 3 cut(s) | 187, 315, 380 |
| BstMAI | GTCTC | 1 cut(s) | 362 |
| BstMBI | GATC | 3 cut(s) | 184, 312, 377 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 347, 356 |
| BstNI | CCWGG | 2 cut(s) | 490, 561 |
| BstNSI | RCATGY | 3 cut(s) | 54, 420, 559 |
| BstSCI | CCNGG | 2 cut(s) | 488, 559 |
| BstSFI | CTRYAG | 2 cut(s) | 237, 526 |
| BstV1I | GCAGC | 2 cut(s) | 343, 411 |
| BstV2I | GAAGAC | 1 cut(s) | 384 |
| BsuRI | GGCC | 5 cut(s) | 128, 350, 432, 493, 544 |
| BtgI | CCRYGG | 1 cut(s) | 576 |
| BtsCI | GGATG | 1 cut(s) | 393 |
| BtsIMutI | CAGTG | 1 cut(s) | 408 |
| CaiI | CAGNNNCTG | 1 cut(s) | 321 |
| Cfr13I | GGNCC | 3 cut(s) | 126, 542, 573 |
| CviAII | CATG | 4 cut(s) | 51, 417, 556, 577 |
| DdeI | CTNAG | 1 cut(s) | 400 |
| DpnI | GATC | 3 cut(s) | 186, 314, 379 |
| DpnII | GATC | 3 cut(s) | 184, 312, 377 |
| EaeI | YGGCCR | 1 cut(s) | 348 |
| Eco130I | CCWWGG | 2 cut(s) | 545, 576 |
| Eco24I | GRGCYC | 1 cut(s) | 78 |
| Eco47I | GGWCC | 1 cut(s) | 573 |
| Eco57I | CTGAAG | 1 cut(s) | 86 |
| EcoO109I | RGGNCCY | 1 cut(s) | 542 |
| EcoRII | CCWGG | 2 cut(s) | 488, 559 |
| EcoT14I | CCWWGG | 2 cut(s) | 545, 576 |
| EcoT22I | ATGCAT | 1 cut(s) | 16 |
| EcoT38I | GRGCYC | 1 cut(s) | 78 |
| ErhI | CCWWGG | 2 cut(s) | 545, 576 |
| FaeI | CATG | 4 cut(s) | 54, 420, 559, 580 |
| FaqI | GGGAC | 2 cut(s) | 332, 489 |
| FatI | CATG | 4 cut(s) | 50, 416, 555, 576 |
| FblI | GTMKAC | 1 cut(s) | 175 |
| Fnu4HI | GCNGC | 2 cut(s) | 357, 425 |
| FokI | GGATG | 1 cut(s) | 400 |
| FriOI | GRGCYC | 1 cut(s) | 78 |
| Fsp4HI | GCNGC | 2 cut(s) | 357, 425 |
| FspBI | CTAG | 3 cut(s) | 30, 428, 546 |
| GluI | GCNGC | 2 cut(s) | 357, 425 |
| GsuI | CTGGAG | 2 cut(s) | 329, 386 |
| HaeIII | GGCC | 5 cut(s) | 128, 350, 432, 493, 544 |
| HapII | CCGG | 3 cut(s) | 154, 249, 494 |
| Hin1II | CATG | 4 cut(s) | 54, 420, 559, 580 |
| HinfI | GANTC | 4 cut(s) | 34, 148, 485, 587 |
| HpaII | CCGG | 3 cut(s) | 154, 249, 494 |
| HphI | GGTGA | 2 cut(s) | 13, 344 |
| Hpy166II | GTNNAC | 1 cut(s) | 176 |
| Hpy188I | TCNGA | 1 cut(s) | 206 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 110 |
| Hpy8I | GTNNAC | 1 cut(s) | 176 |
| Hpy99I | CGWCG | 1 cut(s) | 595 |
| HpyAV | CCTTC | 1 cut(s) | 110 |
| HpyCH4III | ACNGT | 1 cut(s) | 323 |
| HpyCH4IV | ACGT | 1 cut(s) | 593 |
| HpyCH4V | TGCA | 4 cut(s) | 14, 144, 359, 539 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 347, 356 |
| HpyF3I | CTNAG | 1 cut(s) | 400 |
| HpySE526I | ACGT | 1 cut(s) | 593 |
| Hsp92II | CATG | 4 cut(s) | 54, 420, 559, 580 |
| Kzo9I | GATC | 3 cut(s) | 184, 312, 377 |
| LmnI | GCTCC | 1 cut(s) | 413 |
| Lsp1109I | GCAGC | 2 cut(s) | 343, 411 |
| LweI | GCATC | 1 cut(s) | 219 |
| MaeI | CTAG | 3 cut(s) | 30, 428, 546 |
| MaeII | ACGT | 1 cut(s) | 593 |
| MaeIII | GTNAC | 3 cut(s) | 257, 332, 438 |
| MalI | GATC | 3 cut(s) | 186, 314, 379 |
| MboI | GATC | 3 cut(s) | 184, 312, 377 |
| MboII | GAAGA | 2 cut(s) | 290, 384 |
| MhlI | GDGCHC | 1 cut(s) | 78 |
| MlsI | TGGCCA | 1 cut(s) | 350 |
| MluCI | AATT | 3 cut(s) | 69, 81, 220 |
| MluNI | TGGCCA | 1 cut(s) | 350 |
| MnlI | CCTC | 4 cut(s) | 117, 438, 465, 591 |
| Mox20I | TGGCCA | 1 cut(s) | 350 |
| Mph1103I | ATGCAT | 1 cut(s) | 16 |
| MscI | TGGCCA | 1 cut(s) | 350 |
| MseI | TTAA | 2 cut(s) | 17, 450 |
| Msp20I | TGGCCA | 1 cut(s) | 350 |
| MspI | CCGG | 3 cut(s) | 154, 249, 494 |
| MspR9I | CCNGG | 2 cut(s) | 490, 561 |
| MvaI | CCWGG | 2 cut(s) | 490, 561 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 347, 356 |
| NcoI | CCATGG | 1 cut(s) | 576 |
| NdeII | GATC | 3 cut(s) | 184, 312, 377 |
| NlaIII | CATG | 4 cut(s) | 54, 420, 559, 580 |
| NlaIV | GGNNCC | 2 cut(s) | 127, 208 |
| NmuCI | GTSAC | 2 cut(s) | 257, 332 |
| NsiI | ATGCAT | 1 cut(s) | 16 |
| NspI | RCATGY | 3 cut(s) | 54, 420, 559 |
| PciI | ACATGT | 1 cut(s) | 50 |
| PfeI | GAWTC | 4 cut(s) | 34, 148, 485, 587 |
| PkrI | GCNGC | 2 cut(s) | 358, 426 |
| PscI | ACATGT | 1 cut(s) | 50 |
| PshBI | ATTAAT | 1 cut(s) | 17 |
| Psp6I | CCWGG | 2 cut(s) | 488, 559 |
| PspGI | CCWGG | 2 cut(s) | 488, 559 |
| PspN4I | GGNNCC | 2 cut(s) | 127, 208 |
| PspPI | GGNCC | 3 cut(s) | 126, 542, 573 |
| PstNI | CAGNNNCTG | 1 cut(s) | 321 |
| SaqAI | TTAA | 2 cut(s) | 17, 450 |
| SatI | GCNGC | 2 cut(s) | 357, 425 |
| Sau3AI | GATC | 3 cut(s) | 184, 312, 377 |
| Sau96I | GGNCC | 3 cut(s) | 126, 542, 573 |
| ScrFI | CCNGG | 2 cut(s) | 490, 561 |
| SduI | GDGCHC | 1 cut(s) | 78 |
| SfaNI | GCATC | 1 cut(s) | 219 |
| SfcI | CTRYAG | 2 cut(s) | 237, 526 |
| SinI | GGWCC | 1 cut(s) | 573 |
| Sse9I | AATT | 3 cut(s) | 69, 81, 220 |
| SspMI | CTAG | 3 cut(s) | 30, 428, 546 |
| StyD4I | CCNGG | 2 cut(s) | 488, 559 |
| StyI | CCWWGG | 2 cut(s) | 545, 576 |
| TaaI | ACNGT | 1 cut(s) | 323 |
| TaiI | ACGT | 1 cut(s) | 596 |
| TaqI | TCGA | 2 cut(s) | 187, 590 |
| TasI | AATT | 3 cut(s) | 69, 81, 220 |
| TfiI | GAWTC | 4 cut(s) | 34, 148, 485, 587 |
| Tru1I | TTAA | 2 cut(s) | 17, 450 |
| Tru9I | TTAA | 2 cut(s) | 17, 450 |
| TscAI | CASTG | 1 cut(s) | 408 |
| TseFI | GTSAC | 2 cut(s) | 257, 332 |
| TseI | GCWGC | 2 cut(s) | 356, 424 |
| Tsp45I | GTSAC | 2 cut(s) | 257, 332 |
| TspDTI | ATGAA | 1 cut(s) | 260 |
| TspGWI | ACGGA | 1 cut(s) | 315 |
| TspRI | CASTG | 1 cut(s) | 408 |
| VpaK11BI | GGWCC | 1 cut(s) | 573 |
| VspI | ATTAAT | 1 cut(s) | 17 |
| XapI | RAATTY | 2 cut(s) | 81, 220 |
| XceI | RCATGY | 3 cut(s) | 54, 420, 559 |
| XmaJI | CCTAGG | 1 cut(s) | 545 |
| XmiI | GTMKAC | 1 cut(s) | 175 |
| XspI | CTAG | 3 cut(s) | 30, 428, 546 |
| Zsp2I | ATGCAT | 1 cut(s) | 16 |