Prupe.8G253300_v2.0.a1

Protein TRANSPORT INHIBITOR RESPONSE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0011947
Physical Location & Seq
Forward (+)
21689015 .. 21692960
3946 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G253300.1

Sequence Viewer

Length: 1755 bp
ATGCTGAAAATGGCGAACTCGTTCCCAGAGGAGGTGCTAGAACACGTGTTCTCGTTCATACAGTCGGACTCGGACCGGAACTCGATCTCGATGGTGTGCAAGTCGTGGTACGAGATCGAGCGATGGTGCAGGAGGAGAATATTCATCGGGAACTGCTACGCCGTGAGCCCTAGGATGATGATCAGACGGTTCCCAGACATTAGATCCATCGAGCTTAAAGGGAAGCCTCACTTCGCCGACTTTAATCTGGTCCCTGAAGGCTGGGGTGGCTATGTCCACCCCTGGATCGCCGCCATGGCTGATGCCTACCCTTGGCTTGAGGAGATCAAGCTCAAGAGGATGGTTGTCACCGACGAGACCCTGGAGCTGATTGCCAAGTCTTTCAAGAATTTCAAGCTCCTTGTGCTTTCGTCTTGCGAGGGGTTCAGTACTGATGGCCTTGCCGCCATTGCTGCCAATTGCAGGAATCTGCGGGAGCTGGACTTGCATGAGAGCGATGTGGAGGACCTGAGTGGGCATTGGCTCAGCCATTTCCCTGATACGTACACATCACTTGTTTCCCTTAACATTGCCTGCTTAGGGTCTGAGTTTAGTTTCTCTTCTCTGGAGCGCCTGGTGGGTAGGTGTCCCAATCTGAAGAGTCTCCGGCTCAATCGCGCTGTGCCTCTTGACAGGCTAGCCAATCTACTTCACCGGGCACCTCAGCTGGTTGAGTTAGGCACAGGGGCCTACTCAGCTGAGTTGCGGCCTGATCTCTTCTCAAACCTAGCAGGTTCGCTCTCGGGATGCAAGGAACTCGAGAGCCTATCTGGGTTTTGGGATGTGGTCCCAGCATATCTTCCAGCTATTTATTCTATCTGCCCCGGGCTGACATCACTAAATTTGAGTTATGCCACTATTCCAAGTCCCGATCTTATAAAGCTTGTTAGCCAATGTCCAAATCTGCAGCGCCTTTGGGTATTGGATTACATTGAAGATGTTGGCCTTGATGCCCTGGCAGTATCTTGCAAAGATCTACGAGAATTAAGGGTGTTTCCATCAGATCCGTTTGTAGTGGAACCAAATGTGTTGTTGACAGAGCAGGGCCTCATATCTGTTTCTGAGGGCTGTCCAAAGCTCCAGTCAGTTCTGTACTTCTGCCGGCAAATGTCTAATGATGCACTAATCACCATTGCAAGGAATCAACCTAACTTTACATGTTTTCGTCTTTGTATAATTGAGCCCCGAACTCCAGACTACCTTACCCTTGAGCCACTTGATGTGGGTTTTGGGGCCATTGTTGAGCACTGCAAGGATCTCCGGCGGTTGTCTGTCTCCGGTCTACTAACTGATCGTGCGTTTGAGTATATTGGAACACATGGAAAAAAGTTGGAGATGCTTTCTCTGGCCTTTGCTGGAGATAGTGACTTGGGGCTTCATCATGTATTGTCTGGGTGTGAGAATCTACGGAAACTGGAGATTAGGGACTGTCCTTTCGGTGATAAGGCTCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCTTCTTGCTCAGTGAGTTATGGAGCATGTAAGCTGCTAGGTCAGAAGTTGCCGAGGCTTAATGTTGAAGTTATAGATGAGAGGGGGCACCCGGAGTCCAGGCCGGAGAGCTGTCCTGTTGAGAAGCTCTACATTTATAGGTCCGTCGCTGGTCCAAGGTTTGACATGCCTGGCTTTGTTTGGACCATGGATGAAGATTCTGCAGTGAGGGTTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0000822 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0008144 GO:0008150 GO:0008152 GO:0009267 GO:0009555 GO:0009605 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0009991 GO:0010011 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010152 GO:0010311 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0016567 GO:0016740 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031461 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0032446 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033554 GO:0036094 GO:0036211 GO:0038023 GO:0038198 GO:0042221 GO:0042562 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045013 GO:0045014 GO:0045892 GO:0045934 GO:0045990 GO:0046015 GO:0048229 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060089 GO:0060255 GO:0061458 GO:0061984 GO:0061985 GO:0061986 GO:0065007 GO:0070647 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071496 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1905393 GO:1990234 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box F-box-like LRR_6

Protein Analysis

585

Amino Acids

65.57

Weight (kDa)

5.6

Isoelectric Point (pI)

47.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62980
fragaria_vesca FvH4_2g24840
malus_domestica MD03G1276700.v1.1 MD11G1299000.v1.1
prunus_persica Prupe.8G253300_v2.0.a1
pyrus_communis pycom03g22040 pycom10g25620 pycom11g26270 pycom17g00400
rosa_chinensis RchiOBHm_Chr6g0292661
rosa_laevigata RLG00000011999
rosa_multiflora Rmu_sc0000515.1_g000020
rosa_roxburghii Rroxscaffold_7G00174780
rosa_rugosa Rorug06G0228900
rosa_samantha Rh6AG342200 Rh6BG349500 Rh6CG356400 Rh6DG342500
rosa_wichuraiana Rw6G029830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 917
Acc36I ACCTGC 1 cut(s) 761
AccB1I GGYRCC 2 cut(s) 697, 1623
AccI GTMKAC 1 cut(s) 1321
AccII CGCG 1 cut(s) 657
AciI CCGC 5 cut(s) 291, 444, 472, 745, 1303
AclWI GGATC 5 cut(s) 198, 293, 1037, 1302, 1518
AcoI YGGCCR 1 cut(s) 1494
AcsI RAATTY 2 cut(s) 388, 880
AcuI CTGAAG 2 cut(s) 276, 656
AcvI CACGTG 1 cut(s) 46
AfaI GTAC 4 cut(s) 110, 430, 545, 1133
AfiI CCNNNNNNNGG 5 cut(s) 31, 312, 462, 579, 1176
AflIII ACRYGT 3 cut(s) 43, 45, 1196
AgsI TTSAA 4 cut(s) 385, 394, 974, 1604
AjnI CCWGG 6 cut(s) 281, 360, 612, 993, 1634, 1705
Alw21I GWGCWC 1 cut(s) 1287
Alw26I GTCTC 4 cut(s) 350, 647, 1318, 1508
AlwI GGATC 5 cut(s) 198, 293, 1037, 1302, 1518
Ama87I CYCGRG 3 cut(s) 781, 797, 863
AoxI GGCC 9 cut(s) 436, 726, 746, 982, 1084, 1272, 1386, 1494, 1637
ApeKI GCWGC 4 cut(s) 452, 946, 1502, 1570
ApoI RAATTY 2 cut(s) 388, 880
ArsI GACNNNNNNTTYG 4 cut(s) 1106, 1138, 1457, 1489
Asp700I GAANNNNTTC 1 cut(s) 20
AspA2I CCTAGG 1 cut(s) 170
AspLEI GCGC 3 cut(s) 612, 659, 951
AsuC2I CCSGG 4 cut(s) 695, 864, 865, 1628
AsuHPI GGTGA 4 cut(s) 340, 683, 1159, 1490
AsuNHI GCTAGC 1 cut(s) 676
AvaI CYCGRG 3 cut(s) 781, 797, 863
AvaII GGWCC 7 cut(s) 73, 250, 505, 826, 1677, 1688, 1719
AvrII CCTAGG 1 cut(s) 170
BaeGI GKGCMC 2 cut(s) 700, 1626
BalI TGGCCA 1 cut(s) 1496
BanI GGYRCC 2 cut(s) 697, 1623
BanII GRGCYC 2 cut(s) 170, 1224
BbrPI CACGTG 1 cut(s) 46
BbsI GAAGAC 1 cut(s) 1530
Bbv12I GWGCWC 1 cut(s) 1287
BbvCI CCTCAGC 1 cut(s) 702
BbvI GCAGC 4 cut(s) 439, 958, 1489, 1557
BccI CCATC 6 cut(s) 85, 117, 215, 334, 428, 1045
BceAI ACGGC 1 cut(s) 146
BcgI CGANNNNNNTGC 2 cut(s) 778, 812
BciT130I CCWGG 6 cut(s) 283, 362, 614, 995, 1636, 1707
BclI TGATCA 1 cut(s) 180
BcnI CCSGG 4 cut(s) 695, 864, 865, 1628
BcoDI GTCTC 4 cut(s) 350, 647, 1318, 1508
BfaI CTAG 5 cut(s) 38, 171, 677, 767, 1574
BfmI CTRYAG 2 cut(s) 944, 1737
BfoI RGCGCY 2 cut(s) 613, 952
BfuAI ACCTGC 1 cut(s) 761
BglI GCCNNNNNGGC 1 cut(s) 296
BglII AGATCT 1 cut(s) 1012
BisI GCNGC 7 cut(s) 291, 444, 453, 746, 947, 1503, 1571
BlnI CCTAGG 1 cut(s) 170
BlpI GCTNAGC 1 cut(s) 524
BlsI GCNGC 7 cut(s) 292, 445, 454, 747, 948, 1504, 1572
BmcAI AGTACT 1 cut(s) 430
Bme18I GGWCC 7 cut(s) 73, 250, 505, 826, 1677, 1688, 1719
BmeT110I CYCGRG 3 cut(s) 781, 797, 863
BmiI GGNNCC 8 cut(s) 191, 252, 699, 727, 828, 1059, 1273, 1625
BmsI GCATC 5 cut(s) 292, 776, 979, 1147, 1365
BmtI GCTAGC 1 cut(s) 680
BpiI GAAGAC 1 cut(s) 1530
BpmI CTGGAG 7 cut(s) 383, 626, 1103, 1215, 1416, 1475, 1532
Bpu10I CCTNAGC 2 cut(s) 577, 702
Bpu1102I GCTNAGC 1 cut(s) 524
BpuEI CTTGAG 3 cut(s) 317, 338, 1268
BpuMI CCSGG 4 cut(s) 695, 864, 865, 1628
BsaAI YACGTR 2 cut(s) 46, 543
BsaBI GATNNNNATC 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 350
BsaWI WCCGGW 2 cut(s) 75, 1316
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 312, 462, 579, 1176
Bse118I RCCGGY 1 cut(s) 1140
Bse1I ACTGG 2 cut(s) 1120, 1458
Bse3DI GCAATG 3 cut(s) 447, 567, 1170
Bse8I GATNNNNATC 1 cut(s) 179
BseBI CCWGG 6 cut(s) 283, 362, 614, 995, 1636, 1707
BseGI GGATG 6 cut(s) 180, 345, 791, 826, 1539, 1732
BseJI GATNNNNATC 1 cut(s) 179
BseLI CCNNNNNNNGG 5 cut(s) 31, 312, 462, 579, 1176
BseMI GCAATG 3 cut(s) 447, 567, 1170
BseMII CTCAG 8 cut(s) 500, 538, 576, 716, 729, 747, 1092, 1560
BseNI ACTGG 2 cut(s) 1120, 1458
BseRI GAGGAG 3 cut(s) 44, 148, 335
BseSI GKGCMC 2 cut(s) 700, 1626
BseXI GCAGC 4 cut(s) 439, 958, 1489, 1557
BseYI CCCAGC 2 cut(s) 261, 829
BsgI GTGCAG 1 cut(s) 148
Bsh1236I CGCG 1 cut(s) 657
BshFI GGCC 9 cut(s) 438, 728, 748, 984, 1086, 1274, 1388, 1496, 1639
BshNI GGYRCC 2 cut(s) 697, 1623
BsiHKAI GWGCWC 1 cut(s) 1287
BsiHKCI CYCGRG 3 cut(s) 781, 797, 863
BsiSI CCGG 9 cut(s) 76, 646, 694, 864, 1141, 1300, 1317, 1628, 1640
BslFI GGGAC 5 cut(s) 236, 612, 812, 891, 1478
BslI CCNNNNNNNGG 5 cut(s) 31, 312, 462, 579, 1176
BsmAI GTCTC 4 cut(s) 350, 647, 1318, 1508
BsmFI GGGAC 5 cut(s) 236, 612, 812, 891, 1478
BsnI GGCC 9 cut(s) 438, 728, 748, 984, 1086, 1274, 1388, 1496, 1639
Bso31I GGTCTC 1 cut(s) 350
BsoBI CYCGRG 3 cut(s) 781, 797, 863
Bsp1286I GDGCHC 5 cut(s) 170, 700, 1224, 1287, 1626
Bsp1720I GCTNAGC 1 cut(s) 524
Bsp19I CCATGG 2 cut(s) 294, 1722
BspACI CCGC 5 cut(s) 291, 444, 472, 745, 1303
BspANI GGCC 9 cut(s) 438, 728, 748, 984, 1086, 1274, 1388, 1496, 1639
BspCNI CTCAG 8 cut(s) 501, 537, 577, 715, 730, 746, 1093, 1559
BspFNI CGCG 1 cut(s) 657
BspLI GGNNCC 8 cut(s) 191, 252, 699, 727, 828, 1059, 1273, 1625
BspMAI CTGCAG 2 cut(s) 948, 1741
BspMI ACCTGC 1 cut(s) 761
BspOI GCTAGC 1 cut(s) 680
BspPI GGATC 5 cut(s) 198, 293, 1037, 1302, 1518
BspT107I GGYRCC 2 cut(s) 697, 1623
BspTNI GGTCTC 1 cut(s) 350
BsrDI GCAATG 3 cut(s) 447, 567, 1170
BsrFI RCCGGY 1 cut(s) 1140
BsrI ACTGG 2 cut(s) 1120, 1458
BssAI RCCGGY 1 cut(s) 1140
BssT1I CCWWGG 5 cut(s) 170, 294, 311, 1691, 1722
Bst2UI CCWGG 6 cut(s) 283, 362, 614, 995, 1636, 1707
Bst4CI ACNGT 3 cut(s) 63, 189, 1469
Bst6I CTCTTC 3 cut(s) 604, 632, 761
BstBAI YACGTR 2 cut(s) 46, 543
BstC8I GCNNGC 3 cut(s) 574, 678, 1142
BstDEI CTNAG 9 cut(s) 509, 524, 577, 585, 702, 733, 738, 1101, 1546
BstDSI CCRYGG 2 cut(s) 294, 1722
BstF5I GGATG 6 cut(s) 180, 345, 791, 826, 1539, 1732
BstFNI CGCG 1 cut(s) 657
BstH2I RGCGCY 2 cut(s) 613, 952
BstHHI GCGC 3 cut(s) 612, 659, 951
BstMAI GTCTC 4 cut(s) 350, 647, 1318, 1508
BstMWI GCNNNNNNNGC 9 cut(s) 267, 296, 403, 449, 452, 484, 734, 1493, 1502
BstNI CCWGG 6 cut(s) 283, 362, 614, 995, 1636, 1707
BstNSI RCATGY 3 cut(s) 1200, 1566, 1705
BstSFI CTRYAG 2 cut(s) 944, 1737
BstSLI GKGCMC 2 cut(s) 700, 1626
BstSNI TACGTA 1 cut(s) 543
BstUI CGCG 1 cut(s) 657
BstV1I GCAGC 4 cut(s) 439, 958, 1489, 1557
BstV2I GAAGAC 1 cut(s) 1530
BstX2I RGATCY 4 cut(s) 203, 1012, 1042, 1294
BstYI RGATCY 4 cut(s) 203, 1012, 1042, 1294
BsuRI GGCC 9 cut(s) 438, 728, 748, 984, 1086, 1274, 1388, 1496, 1639
BtgI CCRYGG 2 cut(s) 294, 1722
BtgZI GCGATG 2 cut(s) 136, 510
BtsCI GGATG 6 cut(s) 180, 345, 791, 826, 1539, 1732
BtsI GCAGTG 2 cut(s) 1285, 1746
BtsIMutI CAGTG 3 cut(s) 1285, 1554, 1746
BveI ACCTGC 1 cut(s) 761
Cac8I GCNNGC 3 cut(s) 574, 678, 1142
CfoI GCGC 3 cut(s) 612, 659, 951
Cfr10I RCCGGY 1 cut(s) 1140
Cfr9I CCCGGG 1 cut(s) 863
CpoI CGGWCCG 1 cut(s) 73
Csp6I GTAC 4 cut(s) 109, 429, 544, 1132
CspI CGGWCCG 1 cut(s) 73
CviAII CATG 8 cut(s) 295, 488, 1197, 1358, 1421, 1563, 1702, 1723
CviQI GTAC 4 cut(s) 109, 429, 544, 1132
DdeI CTNAG 9 cut(s) 509, 524, 577, 585, 702, 733, 738, 1101, 1546
EaeI YGGCCR 1 cut(s) 1494
Eam1104I CTCTTC 3 cut(s) 604, 632, 761
EarI CTCTTC 3 cut(s) 604, 632, 761
Eco105I TACGTA 1 cut(s) 543
Eco130I CCWWGG 5 cut(s) 170, 294, 311, 1691, 1722
Eco24I GRGCYC 2 cut(s) 170, 1224
Eco31I GGTCTC 1 cut(s) 350
Eco47I GGWCC 7 cut(s) 73, 250, 505, 826, 1677, 1688, 1719
Eco57I CTGAAG 2 cut(s) 276, 656
Eco72I CACGTG 1 cut(s) 46
Eco88I CYCGRG 3 cut(s) 781, 797, 863
EcoO109I RGGNCCY 3 cut(s) 505, 726, 1084
EcoRII CCWGG 6 cut(s) 281, 360, 612, 993, 1634, 1705
EcoT14I CCWWGG 5 cut(s) 170, 294, 311, 1691, 1722
EcoT38I GRGCYC 2 cut(s) 170, 1224
ErhI CCWWGG 5 cut(s) 170, 294, 311, 1691, 1722
FaeI CATG 8 cut(s) 298, 491, 1200, 1361, 1424, 1566, 1705, 1726
FalI AAGNNNNNCTT 2 cut(s) 215, 247
FaqI GGGAC 5 cut(s) 236, 612, 812, 891, 1478
FatI CATG 8 cut(s) 294, 487, 1196, 1357, 1420, 1562, 1701, 1722
FauI CCCGC 1 cut(s) 465
FbaI TGATCA 1 cut(s) 180
FblI GTMKAC 1 cut(s) 1321
Fnu4HI GCNGC 7 cut(s) 291, 444, 453, 746, 947, 1503, 1571
FokI GGATG 6 cut(s) 187, 352, 798, 833, 1546, 1739
FriOI GRGCYC 2 cut(s) 170, 1224
Fsp4HI GCNGC 7 cut(s) 291, 444, 453, 746, 947, 1503, 1571
FspBI CTAG 5 cut(s) 38, 171, 677, 767, 1574
GlaI GCGC 3 cut(s) 611, 658, 950
GluI GCNGC 7 cut(s) 291, 444, 453, 746, 947, 1503, 1571
GsaI CCCAGC 2 cut(s) 265, 833
GsuI CTGGAG 7 cut(s) 383, 626, 1103, 1215, 1416, 1475, 1532
HaeII RGCGCY 2 cut(s) 613, 952
HaeIII GGCC 9 cut(s) 438, 728, 748, 984, 1086, 1274, 1388, 1496, 1639
HapII CCGG 9 cut(s) 76, 646, 694, 864, 1141, 1300, 1317, 1628, 1640
HhaI GCGC 3 cut(s) 612, 659, 951
Hin1II CATG 8 cut(s) 298, 491, 1200, 1361, 1424, 1566, 1705, 1726
Hin6I GCGC 3 cut(s) 610, 657, 949
HinP1I GCGC 3 cut(s) 610, 657, 949
HincII GTYRAC 1 cut(s) 1074
HindII GTYRAC 1 cut(s) 1074
HindIII AAGCTT 1 cut(s) 920
HinfI GANTC 7 cut(s) 68, 466, 640, 1180, 1441, 1631, 1733
HpaII CCGG 9 cut(s) 76, 646, 694, 864, 1141, 1300, 1317, 1628, 1640
HphI GGTGA 4 cut(s) 340, 683, 1159, 1490
Hpy166II GTNNAC 4 cut(s) 277, 546, 1074, 1322
Hpy188I TCNGA 8 cut(s) 67, 73, 185, 586, 636, 1042, 1102, 1581
Hpy8I GTNNAC 4 cut(s) 277, 546, 1074, 1322
Hpy99I CGWCG 2 cut(s) 356, 1685
HpyAV CCTTC 1 cut(s) 251
HpyCH4III ACNGT 3 cut(s) 63, 189, 1469
HpyCH4IV ACGT 2 cut(s) 45, 542
HpyF10VI GCNNNNNNNGC 9 cut(s) 267, 296, 403, 449, 452, 484, 734, 1493, 1502
HpyF3I CTNAG 9 cut(s) 509, 524, 577, 585, 702, 733, 738, 1101, 1546
HpySE526I ACGT 2 cut(s) 45, 542
Hsp92II CATG 8 cut(s) 298, 491, 1200, 1361, 1424, 1566, 1705, 1726
HspAI GCGC 3 cut(s) 610, 657, 949
KroI GCCGGC 1 cut(s) 1140
KroNI GCCGGC 1 cut(s) 1142
Ksp22I TGATCA 1 cut(s) 180
LmnI GCTCC 6 cut(s) 364, 402, 475, 607, 1122, 1559
Lsp1109I GCAGC 4 cut(s) 439, 958, 1489, 1557
LweI GCATC 5 cut(s) 292, 776, 979, 1147, 1365
MaeI CTAG 5 cut(s) 38, 171, 677, 767, 1574
MaeII ACGT 2 cut(s) 45, 542
MaeIII GTNAC 3 cut(s) 346, 1403, 1747
MboII GAAGA 7 cut(s) 591, 649, 748, 830, 986, 1530, 1742
MfeI CAATTG 1 cut(s) 457
MflI RGATCY 4 cut(s) 203, 1012, 1042, 1294
MhlI GDGCHC 5 cut(s) 170, 700, 1224, 1287, 1626
MlsI TGGCCA 1 cut(s) 1496
MluCI AATT 5 cut(s) 388, 457, 880, 1022, 1215
MluNI TGGCCA 1 cut(s) 1496
MlyI GAGTC 3 cut(s) 62, 649, 1640
MmeI TCCRAC 2 cut(s) 45, 1350
Mox20I TGGCCA 1 cut(s) 1496
MroNI GCCGGC 1 cut(s) 1140
MroXI GAANNNNTTC 1 cut(s) 20
MscI TGGCCA 1 cut(s) 1496
MseI TTAA 5 cut(s) 216, 243, 564, 1025, 1596
Msp20I TGGCCA 1 cut(s) 1496
MspA1I CMGCKG 2 cut(s) 706, 737
MspI CCGG 9 cut(s) 76, 646, 694, 864, 1141, 1300, 1317, 1628, 1640
MunI CAATTG 1 cut(s) 457
MvaI CCWGG 6 cut(s) 283, 362, 614, 995, 1636, 1707
MvnI CGCG 1 cut(s) 657
MwoI GCNNNNNNNGC 9 cut(s) 267, 296, 403, 449, 452, 484, 734, 1493, 1502
NaeI GCCGGC 1 cut(s) 1142
NciI CCSGG 4 cut(s) 695, 864, 865, 1628
NcoI CCATGG 2 cut(s) 294, 1722
NgoMIV GCCGGC 1 cut(s) 1140
NheI GCTAGC 1 cut(s) 676
NlaIII CATG 8 cut(s) 298, 491, 1200, 1361, 1424, 1566, 1705, 1726
NlaIV GGNNCC 8 cut(s) 191, 252, 699, 727, 828, 1059, 1273, 1625
NmeAIII GCCGAG 1 cut(s) 1614
NmuCI GTSAC 2 cut(s) 346, 1403
NspI RCATGY 3 cut(s) 1200, 1566, 1705
PaeR7I CTCGAG 1 cut(s) 797
PciI ACATGT 1 cut(s) 1196
PdiI GCCGGC 1 cut(s) 1142
PdmI GAANNNNTTC 1 cut(s) 20
PfeI GAWTC 4 cut(s) 466, 1180, 1441, 1733
PkrI GCNGC 7 cut(s) 292, 445, 454, 747, 948, 1504, 1572
PleI GAGTC 3 cut(s) 62, 648, 1639
PmaCI CACGTG 1 cut(s) 46
PmlI CACGTG 1 cut(s) 46
PpsI GAGTC 3 cut(s) 62, 648, 1639
Ppu21I YACGTR 2 cut(s) 46, 543
PpuMI RGGWCCY 1 cut(s) 505
PscI ACATGT 1 cut(s) 1196
PsiI TTATAA 1 cut(s) 917
Psp5II RGGWCCY 1 cut(s) 505
Psp6I CCWGG 6 cut(s) 281, 360, 612, 993, 1634, 1705
PspCI CACGTG 1 cut(s) 46
PspFI CCCAGC 2 cut(s) 261, 829
PspGI CCWGG 6 cut(s) 281, 360, 612, 993, 1634, 1705
PspN4I GGNNCC 8 cut(s) 191, 252, 699, 727, 828, 1059, 1273, 1625
PspPPI RGGWCCY 1 cut(s) 505
PstI CTGCAG 2 cut(s) 948, 1741
PsuI RGATCY 4 cut(s) 203, 1012, 1042, 1294
PvuII CAGCTG 2 cut(s) 706, 737
RsaI GTAC 4 cut(s) 110, 430, 545, 1133
RsaNI GTAC 4 cut(s) 109, 429, 544, 1132
Rsr2I CGGWCCG 1 cut(s) 73
RsrII CGGWCCG 1 cut(s) 73
SaqAI TTAA 5 cut(s) 216, 243, 564, 1025, 1596
SatI GCNGC 7 cut(s) 291, 444, 453, 746, 947, 1503, 1571
ScaI AGTACT 1 cut(s) 430
SchI GAGTC 3 cut(s) 62, 649, 1640
SduI GDGCHC 5 cut(s) 170, 700, 1224, 1287, 1626
SfaNI GCATC 5 cut(s) 292, 776, 979, 1147, 1365
SfcI CTRYAG 2 cut(s) 944, 1737
Sfr274I CTCGAG 1 cut(s) 797
SinI GGWCC 7 cut(s) 73, 250, 505, 826, 1677, 1688, 1719
SlaI CTCGAG 1 cut(s) 797
SmaI CCCGGG 1 cut(s) 865
SmlI CTYRAG 4 cut(s) 317, 332, 797, 1247
SmoI CTYRAG 4 cut(s) 317, 332, 797, 1247
SnaBI TACGTA 1 cut(s) 543
Sse9I AATT 5 cut(s) 388, 457, 880, 1022, 1215
SsiI CCGC 5 cut(s) 291, 444, 472, 745, 1303
SspI AATATT 1 cut(s) 141
SspMI CTAG 5 cut(s) 38, 171, 677, 767, 1574
StyI CCWWGG 5 cut(s) 170, 294, 311, 1691, 1722
TaaI ACNGT 3 cut(s) 63, 189, 1469
TaiI ACGT 2 cut(s) 48, 545
TaqI TCGA 5 cut(s) 83, 89, 117, 210, 798
TasI AATT 5 cut(s) 388, 457, 880, 1022, 1215
TatI WGTACW 2 cut(s) 428, 1131
TauI GCSGC 3 cut(s) 293, 446, 748
TfiI GAWTC 4 cut(s) 466, 1180, 1441, 1733
Tru1I TTAA 5 cut(s) 216, 243, 564, 1025, 1596
Tru9I TTAA 5 cut(s) 216, 243, 564, 1025, 1596
TscAI CASTG 3 cut(s) 1292, 1554, 1746
TseFI GTSAC 2 cut(s) 346, 1403
TseI GCWGC 4 cut(s) 452, 946, 1502, 1570
Tsp45I GTSAC 2 cut(s) 346, 1403
TspDTI ATGAA 4 cut(s) 46, 133, 1406, 1743
TspGWI ACGGA 3 cut(s) 1035, 1462, 1669
TspMI CCCGGG 1 cut(s) 863
TspRI CASTG 3 cut(s) 1292, 1554, 1746
VpaK11BI GGWCC 7 cut(s) 73, 250, 505, 826, 1677, 1688, 1719
XapI RAATTY 2 cut(s) 388, 880
XceI RCATGY 3 cut(s) 1200, 1566, 1705
XhoI CTCGAG 1 cut(s) 797
XmaI CCCGGG 1 cut(s) 863
XmaJI CCTAGG 1 cut(s) 170
XmiI GTMKAC 1 cut(s) 1321
XmnI GAANNNNTTC 1 cut(s) 20
XspI CTAG 5 cut(s) 38, 171, 677, 767, 1574
ZrmI AGTACT 1 cut(s) 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.