Rmu_sc0000515.1_g000020

Protein TRANSPORT INHIBITOR RESPONSE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000515.1
OG0011947
Physical Location & Seq
Forward (+)
96469 .. 99474
3006 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000515.1_g000020.1.cds

Sequence Viewer

Length: 1746 bp
atggagaggtcgttcccggaggaggtgctggagcacgtgttctcgttcctgcagtcggacggcgaccggaactcgatctcgctggtgtgcaagtcgtggtacgagatcgagcggtggtgcaggaggaggatattcgttgggaactgctacgctgtgagccctaggattttgatcagtcgtttcccagacgttagatccatcacgctcaaagggaagcctcacttcgccgacttcaatctggtcccggagggctggggtggctacgtgtatccctggatcgccgccatggccggtgcttatccgtggctcgaggagatcaggctcaagaggatggtcgtcaccgacgagagcttggagctgattgccaagtctttcaagaatttcaagctcctcgtgctttcgtcctgtgagggattcagtaccgatggccttgcctccattgccgctaattgcaggaatttgcgggagttggacttgcatgagagtgatgtggaggacctgagtgggcattggctgagccattttcctgatacctacacatcacttgtctcccttaacattgcatgcttgggctctgaggttagtttctctgccctggagcgcctggtgggtaggtgtcccaacctgaggagtctcaggctcaaccgtgcagtgccccttgacaggctatctaatcttcttaaccgtgcgcctcagctggttgagttggggacaggggcctactcagctgaattgcggtctgatgtgttgtcaaacttatcaagtgccctctcggcctgcaaggaactcaagagcctttctgggttttgggatgtggtcccaacttatcttccagctgtgtattctatctgccctgggataacatcactgaatttgagctacgccattattcaaagtcctgaccttatcaagcttgtcagtcaatgtccaaatttgcagcgcctttgggtattggattatattgaagatgttggccttgattccttggcggcgtcttgcaaggatctacgagagttgagggtgtttccatctgatccatttgtggcggaagcgaatgtgtccttgacagaacgaggcctcatttctgtttctgagggctgtccaaagctacagtcagttctgtacttctgccgacaaatgtctaatgacgcattgatgaccattgccaggaatcaacctaactttacttgttttcgcctttgtattattgagccccgaactcccgactatctcacgcatgagccacttgatgtgggtttcggggccattgttgagcactgcaaagatctccggcgcctgtctgtttctggtctgttaactgatcgcgcatttgagtacattggtacttatggcaaaaggttggagatgctttcgctagcctttgctggagattctgacctgggacttcatcatgtgctatcggggtgtgataatcttcggaaacttgagattagggactgtccttttggtgacaaggctcttttggccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcagtgagttatggagcatgtaaactgctaggtcagaagttgccccggcttaatgtggaagttattgacgagaggggacacccagaattgaggccggagagctgtcctgttgagaagctctatatatacaggtctgttgctggtcctaggtttgacatgcctggctttgtttggaccatggatgaaaaccctgcattgaggctcacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0000822 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0008144 GO:0008150 GO:0008152 GO:0009267 GO:0009555 GO:0009605 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0009991 GO:0010011 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010152 GO:0010311 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0016567 GO:0016740 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031461 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0032446 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033554 GO:0036094 GO:0036211 GO:0038023 GO:0038198 GO:0042221 GO:0042562 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045013 GO:0045014 GO:0045892 GO:0045934 GO:0045990 GO:0046015 GO:0048229 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060089 GO:0060255 GO:0061458 GO:0061984 GO:0061985 GO:0061986 GO:0065007 GO:0070647 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071496 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1905393 GO:1990234 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box F-box-like LRR_6

Protein Analysis

581

Amino Acids

65.17

Weight (kDa)

5.81

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62980
fragaria_vesca FvH4_2g24840
malus_domestica MD03G1276700.v1.1 MD11G1299000.v1.1
prunus_persica Prupe.8G253300_v2.0.a1
pyrus_communis pycom03g22040 pycom10g25620 pycom11g26270 pycom17g00400
rosa_chinensis RchiOBHm_Chr6g0292661
rosa_laevigata RLG00000011999
rosa_multiflora Rmu_sc0000515.1_g000020
rosa_roxburghii Rroxscaffold_7G00174780
rosa_rugosa Rorug06G0228900
rosa_samantha Rh6AG342200 Rh6BG349500 Rh6CG356400 Rh6DG342500
rosa_wichuraiana Rw6G029830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1293
AccBSI CCGCTC 1 cut(s) 112
AccII CGCG 1 cut(s) 1326
AciI CCGC 7 cut(s) 112, 282, 444, 463, 736, 989, 1046
AclWI GGATC 5 cut(s) 189, 284, 1011, 1028, 1509
AcoI YGGCCR 2 cut(s) 288, 1485
AcsI RAATTY 4 cut(s) 379, 457, 871, 931
AcvI CACGTG 1 cut(s) 37
AcyI GRCGYC 2 cut(s) 992, 1294
AfaI GTAC 5 cut(s) 101, 421, 1124, 1337, 1345
AfiI CCNNNNNNNGG 5 cut(s) 22, 55, 627, 663, 1167
AflIII ACRYGT 2 cut(s) 36, 264
AgsI TTSAA 5 cut(s) 235, 376, 385, 893, 965
AjnI CCWGG 7 cut(s) 272, 594, 603, 853, 1166, 1398, 1696
AloI GAACNNNNNNTCC 3 cut(s) 23, 28, 55
Alw21I GWGCWC 2 cut(s) 36, 1278
Alw26I GTCTC 3 cut(s) 553, 638, 1499
AlwI GGATC 5 cut(s) 189, 284, 1011, 1028, 1509
Ama87I CYCGRG 1 cut(s) 308
AoxI GGCC 9 cut(s) 288, 427, 717, 774, 973, 1075, 1263, 1485, 1628
ApeKI GCWGC 2 cut(s) 937, 1493
ApoI RAATTY 4 cut(s) 379, 457, 871, 931
ArsI GACNNNNNNTTYG 4 cut(s) 1097, 1129, 1448, 1480
AspA2I CCTAGG 2 cut(s) 161, 1682
AspLEI GCGC 5 cut(s) 603, 691, 942, 1296, 1328
AspS9I GGNCC 7 cut(s) 241, 496, 717, 817, 1263, 1679, 1710
AsuC2I CCSGG 3 cut(s) 17, 245, 1582
AsuHPI GGTGA 2 cut(s) 331, 1481
AsuNHI GCTAGC 1 cut(s) 1375
AvaI CYCGRG 1 cut(s) 308
AvaII GGWCC 5 cut(s) 241, 496, 817, 1679, 1710
AvrII CCTAGG 2 cut(s) 161, 1682
AxyI CCTNAGG 1 cut(s) 626
BaeGI GKGCMC 2 cut(s) 657, 769
BalI TGGCCA 1 cut(s) 1487
BanI GGYRCC 1 cut(s) 1293
BanII GRGCYC 3 cut(s) 161, 575, 1215
BauI CACGAG 1 cut(s) 392
BbrPI CACGTG 1 cut(s) 37
BbsI GAAGAC 1 cut(s) 1521
Bbv12I GWGCWC 2 cut(s) 36, 1278
BbvCI CCTCAGC 1 cut(s) 693
BbvI GCAGC 2 cut(s) 949, 1480
BccI CCATC 4 cut(s) 206, 325, 419, 1036
BceAI ACGGC 1 cut(s) 76
BcgI CGANNNNNNTGC 2 cut(s) 413, 447
BciT130I CCWGG 7 cut(s) 274, 596, 605, 855, 1168, 1400, 1698
BciVI GTATCC 1 cut(s) 279
BclI TGATCA 1 cut(s) 171
BcnI CCSGG 3 cut(s) 17, 245, 1582
BcoDI GTCTC 3 cut(s) 553, 638, 1499
BfaI CTAG 4 cut(s) 162, 1376, 1565, 1683
BfmI CTRYAG 2 cut(s) 50, 1109
BfoI RGCGCY 3 cut(s) 604, 943, 1297
BfuI GTATCC 1 cut(s) 279
BglI GCCNNNNNGGC 2 cut(s) 287, 773
BglII AGATCT 1 cut(s) 1285
BisI GCNGC 5 cut(s) 282, 444, 938, 990, 1494
BlnI CCTAGG 2 cut(s) 161, 1682
BlpI GCTNAGC 1 cut(s) 515
BlsI GCNGC 5 cut(s) 283, 445, 939, 991, 1495
Bme18I GGWCC 5 cut(s) 241, 496, 817, 1679, 1710
BmeT110I CYCGRG 1 cut(s) 308
BmgT120I GGNCC 7 cut(s) 241, 496, 717, 817, 1263, 1679, 1710
BmiI GGNNCC 5 cut(s) 243, 718, 819, 1264, 1295
BmsI GCATC 1 cut(s) 1356
BmtI GCTAGC 1 cut(s) 1379
BoxI GACNNNNGTC 1 cut(s) 1138
BpiI GAAGAC 1 cut(s) 1521
BpmI CTGGAG 4 cut(s) 50, 617, 1407, 1523
Bpu10I CCTNAGC 1 cut(s) 693
Bpu1102I GCTNAGC 1 cut(s) 515
BpuEI CTTGAG 3 cut(s) 308, 773, 1466
BpuMI CCSGG 3 cut(s) 17, 245, 1582
BsaAI YACGTR 2 cut(s) 37, 265
BsaBI GATNNNNATC 1 cut(s) 170
BsaHI GRCGYC 2 cut(s) 992, 1294
BsaWI WCCGGW 1 cut(s) 66
BsaXI ACNNNNNCTCC 3 cut(s) 23, 26, 53
Bsc4I CCNNNNNNNGG 5 cut(s) 22, 55, 627, 663, 1167
Bse118I RCCGGY 1 cut(s) 290
Bse21I CCTNAGG 1 cut(s) 626
Bse3DI GCAATG 3 cut(s) 438, 558, 1161
Bse8I GATNNNNATC 1 cut(s) 170
BseBI CCWGG 7 cut(s) 274, 596, 605, 855, 1168, 1400, 1698
BseGI GGATG 4 cut(s) 336, 817, 1530, 1723
BseJI GATNNNNATC 1 cut(s) 170
BseLI CCNNNNNNNGG 5 cut(s) 22, 55, 627, 663, 1167
BseMI GCAATG 3 cut(s) 438, 558, 1161
BseMII CTCAG 9 cut(s) 491, 506, 567, 617, 649, 707, 738, 1083, 1551
BseRI GAGGAG 5 cut(s) 35, 139, 326, 380, 643
BseSI GKGCMC 2 cut(s) 657, 769
BseXI GCAGC 2 cut(s) 949, 1480
BseYI CCCAGC 1 cut(s) 252
BsgI GTGCAG 2 cut(s) 139, 669
Bsh1236I CGCG 1 cut(s) 1326
Bsh1285I CGRYCG 1 cut(s) 67
BshFI GGCC 9 cut(s) 290, 429, 719, 776, 975, 1077, 1265, 1487, 1630
BshNI GGYRCC 1 cut(s) 1293
BsiEI CGRYCG 1 cut(s) 67
BsiHKAI GWGCWC 2 cut(s) 36, 1278
BsiHKCI CYCGRG 1 cut(s) 308
BsiSI CCGG 7 cut(s) 17, 67, 245, 291, 1291, 1582, 1631
BslFI GGGAC 7 cut(s) 227, 603, 724, 803, 1416, 1469, 1626
BslI CCNNNNNNNGG 5 cut(s) 22, 55, 627, 663, 1167
BsmAI GTCTC 3 cut(s) 553, 638, 1499
BsmFI GGGAC 7 cut(s) 227, 603, 724, 803, 1416, 1469, 1626
BsnI GGCC 9 cut(s) 290, 429, 719, 776, 975, 1077, 1265, 1487, 1630
BsoBI CYCGRG 1 cut(s) 308
Bsp1286I GDGCHC 7 cut(s) 36, 161, 575, 657, 769, 1215, 1278
Bsp1720I GCTNAGC 1 cut(s) 515
Bsp19I CCATGG 2 cut(s) 285, 1713
BspACI CCGC 7 cut(s) 112, 282, 444, 463, 736, 989, 1046
BspANI GGCC 9 cut(s) 290, 429, 719, 776, 975, 1077, 1265, 1487, 1630
BspCNI CTCAG 9 cut(s) 492, 507, 568, 618, 648, 706, 737, 1084, 1550
BspFNI CGCG 1 cut(s) 1326
BspLI GGNNCC 5 cut(s) 243, 718, 819, 1264, 1295
BspMAI CTGCAG 1 cut(s) 54
BspOI GCTAGC 1 cut(s) 1379
BspPI GGATC 5 cut(s) 189, 284, 1011, 1028, 1509
BspT107I GGYRCC 1 cut(s) 1293
BsrBI CCGCTC 1 cut(s) 112
BsrDI GCAATG 3 cut(s) 438, 558, 1161
BsrFI RCCGGY 1 cut(s) 290
BssAI RCCGGY 1 cut(s) 290
BssNI GRCGYC 2 cut(s) 992, 1294
BssSI CACGAG 1 cut(s) 392
BssT1I CCWWGG 5 cut(s) 161, 285, 984, 1682, 1713
Bst2BI CACGAG 1 cut(s) 392
Bst2UI CCWGG 7 cut(s) 274, 596, 605, 855, 1168, 1400, 1698
Bst4CI ACNGT 4 cut(s) 647, 686, 1113, 1460
BstACI GRCGYC 2 cut(s) 992, 1294
BstBAI YACGTR 2 cut(s) 37, 265
BstC8I GCNNGC 3 cut(s) 565, 778, 1377
BstDEI CTNAG 9 cut(s) 500, 515, 576, 626, 635, 693, 724, 1092, 1537
BstDSI CCRYGG 3 cut(s) 285, 302, 1713
BstF5I GGATG 4 cut(s) 336, 817, 1530, 1723
BstFNI CGCG 1 cut(s) 1326
BstH2I RGCGCY 3 cut(s) 604, 943, 1297
BstHHI GCGC 5 cut(s) 603, 691, 942, 1296, 1328
BstMAI GTCTC 3 cut(s) 553, 638, 1499
BstMCI CGRYCG 1 cut(s) 67
BstMWI GCNNNNNNNGC 8 cut(s) 258, 287, 394, 440, 725, 773, 1484, 1493
BstNI CCWGG 7 cut(s) 274, 596, 605, 855, 1168, 1400, 1698
BstNSI RCATGY 3 cut(s) 567, 1557, 1696
BstPAI GACNNNNGTC 1 cut(s) 1138
BstSFI CTRYAG 2 cut(s) 50, 1109
BstSLI GKGCMC 2 cut(s) 657, 769
BstUI CGCG 1 cut(s) 1326
BstV1I GCAGC 2 cut(s) 949, 1480
BstV2I GAAGAC 1 cut(s) 1521
BstX2I RGATCY 3 cut(s) 194, 1003, 1285
BstYI RGATCY 3 cut(s) 194, 1003, 1285
Bsu36I CCTNAGG 1 cut(s) 626
BsuI GTATCC 1 cut(s) 279
BsuRI GGCC 9 cut(s) 290, 429, 719, 776, 975, 1077, 1265, 1487, 1630
BtgI CCRYGG 3 cut(s) 285, 302, 1713
BtsCI GGATG 4 cut(s) 336, 817, 1530, 1723
BtsI GCAGTG 2 cut(s) 657, 1276
BtsIMutI CAGTG 4 cut(s) 657, 866, 1276, 1545
Cac8I GCNNGC 3 cut(s) 565, 778, 1377
CfoI GCGC 5 cut(s) 603, 691, 942, 1296, 1328
Cfr10I RCCGGY 1 cut(s) 290
Cfr13I GGNCC 7 cut(s) 241, 496, 717, 817, 1263, 1679, 1710
CseI GACGC 2 cut(s) 981, 1157
Csp6I GTAC 5 cut(s) 100, 420, 1123, 1336, 1344
CviAII CATG 8 cut(s) 286, 479, 564, 1238, 1412, 1554, 1693, 1714
CviQI GTAC 5 cut(s) 100, 420, 1123, 1336, 1344
DdeI CTNAG 9 cut(s) 500, 515, 576, 626, 635, 693, 724, 1092, 1537
DinI GGCGCC 1 cut(s) 1295
EaeI YGGCCR 2 cut(s) 288, 1485
EciI GGCGGA 1 cut(s) 1061
Eco130I CCWWGG 5 cut(s) 161, 285, 984, 1682, 1713
Eco147I AGGCCT 1 cut(s) 1077
Eco24I GRGCYC 3 cut(s) 161, 575, 1215
Eco47I GGWCC 5 cut(s) 241, 496, 817, 1679, 1710
Eco72I CACGTG 1 cut(s) 37
Eco81I CCTNAGG 1 cut(s) 626
Eco88I CYCGRG 1 cut(s) 308
EcoO109I RGGNCCY 2 cut(s) 496, 717
EcoRII CCWGG 7 cut(s) 272, 594, 603, 853, 1166, 1398, 1696
EcoT14I CCWWGG 5 cut(s) 161, 285, 984, 1682, 1713
EcoT38I GRGCYC 3 cut(s) 161, 575, 1215
EgeI GGCGCC 1 cut(s) 1295
EheI GGCGCC 1 cut(s) 1295
ErhI CCWWGG 5 cut(s) 161, 285, 984, 1682, 1713
FaeI CATG 8 cut(s) 289, 482, 567, 1241, 1415, 1557, 1696, 1717
FalI AAGNNNNNCTT 2 cut(s) 206, 238
FaqI GGGAC 7 cut(s) 227, 603, 724, 803, 1416, 1469, 1626
FatI CATG 8 cut(s) 285, 478, 563, 1237, 1411, 1553, 1692, 1713
FauI CCCGC 1 cut(s) 456
FbaI TGATCA 1 cut(s) 171
Fnu4HI GCNGC 5 cut(s) 282, 444, 938, 990, 1494
FokI GGATG 4 cut(s) 343, 824, 1537, 1730
FriOI GRGCYC 3 cut(s) 161, 575, 1215
Fsp4HI GCNGC 5 cut(s) 282, 444, 938, 990, 1494
FspBI CTAG 4 cut(s) 162, 1376, 1565, 1683
GlaI GCGC 5 cut(s) 602, 690, 941, 1295, 1327
GluI GCNGC 5 cut(s) 282, 444, 938, 990, 1494
GsaI CCCAGC 1 cut(s) 256
GsuI CTGGAG 4 cut(s) 50, 617, 1407, 1523
HaeII RGCGCY 3 cut(s) 604, 943, 1297
HaeIII GGCC 9 cut(s) 290, 429, 719, 776, 975, 1077, 1265, 1487, 1630
HapII CCGG 7 cut(s) 17, 67, 245, 291, 1291, 1582, 1631
HgaI GACGC 2 cut(s) 981, 1157
HhaI GCGC 5 cut(s) 603, 691, 942, 1296, 1328
Hin1I GRCGYC 2 cut(s) 992, 1294
Hin1II CATG 8 cut(s) 289, 482, 567, 1241, 1415, 1557, 1696, 1717
Hin6I GCGC 5 cut(s) 601, 689, 940, 1294, 1326
HinP1I GCGC 5 cut(s) 601, 689, 940, 1294, 1326
HincII GTYRAC 1 cut(s) 1317
HindII GTYRAC 1 cut(s) 1317
HindIII AAGCTT 1 cut(s) 911
HinfI GANTC 5 cut(s) 414, 631, 980, 1171, 1391
HpaI GTTAAC 1 cut(s) 1317
HpaII CCGG 7 cut(s) 17, 67, 245, 291, 1291, 1582, 1631
HphI GGTGA 2 cut(s) 331, 1481
Hpy166II GTNNAC 2 cut(s) 1317, 1559
Hpy188I TCNGA 8 cut(s) 58, 577, 742, 1033, 1093, 1396, 1440, 1572
Hpy188III TCNNGA 6 cut(s) 325, 376, 527, 790, 899, 1223
Hpy8I GTNNAC 2 cut(s) 1317, 1559
Hpy99I CGWCG 1 cut(s) 347
HpyCH4III ACNGT 4 cut(s) 647, 686, 1113, 1460
HpyCH4IV ACGT 3 cut(s) 36, 189, 264
HpyF10VI GCNNNNNNNGC 8 cut(s) 258, 287, 394, 440, 725, 773, 1484, 1493
HpyF3I CTNAG 9 cut(s) 500, 515, 576, 626, 635, 693, 724, 1092, 1537
HpySE526I ACGT 3 cut(s) 36, 189, 264
Hsp92I GRCGYC 2 cut(s) 992, 1294
Hsp92II CATG 8 cut(s) 289, 482, 567, 1241, 1415, 1557, 1696, 1717
HspAI GCGC 5 cut(s) 601, 689, 940, 1294, 1326
KasI GGCGCC 1 cut(s) 1293
Ksp22I TGATCA 1 cut(s) 171
KspAI GTTAAC 1 cut(s) 1317
LmnI GCTCC 5 cut(s) 31, 355, 393, 598, 1550
Lsp1109I GCAGC 2 cut(s) 949, 1480
LweI GCATC 1 cut(s) 1356
MaeI CTAG 4 cut(s) 162, 1376, 1565, 1683
MaeII ACGT 3 cut(s) 36, 189, 264
MaeIII GTNAC 2 cut(s) 337, 1469
MbiI CCGCTC 1 cut(s) 112
MboII GAAGA 5 cut(s) 668, 821, 977, 1427, 1521
MflI RGATCY 3 cut(s) 194, 1003, 1285
MhlI GDGCHC 7 cut(s) 36, 161, 575, 657, 769, 1215, 1278
MlsI TGGCCA 1 cut(s) 1487
MluCI AATT 7 cut(s) 379, 448, 457, 731, 871, 931, 1622
MluNI TGGCCA 1 cut(s) 1487
Mly113I GGCGCC 1 cut(s) 1294
MlyI GAGTC 1 cut(s) 640
MmeI TCCRAC 3 cut(s) 36, 450, 1341
Mox20I TGGCCA 1 cut(s) 1487
MscI TGGCCA 1 cut(s) 1487
MseI TTAA 4 cut(s) 555, 681, 1316, 1587
MslI CAYNNNNRTG 1 cut(s) 483
Msp20I TGGCCA 1 cut(s) 1487
MspA1I CMGCKG 3 cut(s) 697, 728, 836
MspI CCGG 7 cut(s) 17, 67, 245, 291, 1291, 1582, 1631
MvaI CCWGG 7 cut(s) 274, 596, 605, 855, 1168, 1400, 1698
MvnI CGCG 1 cut(s) 1326
MwoI GCNNNNNNNGC 8 cut(s) 258, 287, 394, 440, 725, 773, 1484, 1493
NarI GGCGCC 1 cut(s) 1294
NciI CCSGG 3 cut(s) 17, 245, 1582
NcoI CCATGG 2 cut(s) 285, 1713
NheI GCTAGC 1 cut(s) 1375
NlaIII CATG 8 cut(s) 289, 482, 567, 1241, 1415, 1557, 1696, 1717
NlaIV GGNNCC 5 cut(s) 243, 718, 819, 1264, 1295
NmeAIII GCCGAG 1 cut(s) 752
NmuCI GTSAC 2 cut(s) 337, 1469
NspI RCATGY 3 cut(s) 567, 1557, 1696
PaeI GCATGC 1 cut(s) 567
PaeR7I CTCGAG 1 cut(s) 308
PasI CCCWGGG 1 cut(s) 854
PceI AGGCCT 1 cut(s) 1077
PcsI WCGNNNNNNNCGW 1 cut(s) 342
PfeI GAWTC 4 cut(s) 414, 980, 1171, 1391
PfoI TCCNGGA 2 cut(s) 15, 243
PkrI GCNGC 5 cut(s) 283, 445, 939, 991, 1495
PleI GAGTC 1 cut(s) 639
PluTI GGCGCC 1 cut(s) 1297
PmaCI CACGTG 1 cut(s) 37
PmlI CACGTG 1 cut(s) 37
PpsI GAGTC 1 cut(s) 639
Ppu21I YACGTR 2 cut(s) 37, 265
PpuMI RGGWCCY 1 cut(s) 496
PshAI GACNNNNGTC 1 cut(s) 1138
Psp5II RGGWCCY 1 cut(s) 496
Psp6I CCWGG 7 cut(s) 272, 594, 603, 853, 1166, 1398, 1696
PspCI CACGTG 1 cut(s) 37
PspFI CCCAGC 1 cut(s) 252
PspGI CCWGG 7 cut(s) 272, 594, 603, 853, 1166, 1398, 1696
PspN4I GGNNCC 5 cut(s) 243, 718, 819, 1264, 1295
PspPI GGNCC 7 cut(s) 241, 496, 717, 817, 1263, 1679, 1710
PspPPI RGGWCCY 1 cut(s) 496
PspXI VCTCGAGB 1 cut(s) 308
PstI CTGCAG 1 cut(s) 54
PsuI RGATCY 3 cut(s) 194, 1003, 1285
PvuII CAGCTG 3 cut(s) 697, 728, 836
RsaI GTAC 5 cut(s) 101, 421, 1124, 1337, 1345
RsaNI GTAC 5 cut(s) 100, 420, 1123, 1336, 1344
RseI CAYNNNNRTG 1 cut(s) 483
SaqAI TTAA 4 cut(s) 555, 681, 1316, 1587
SatI GCNGC 5 cut(s) 282, 444, 938, 990, 1494
Sau96I GGNCC 7 cut(s) 241, 496, 717, 817, 1263, 1679, 1710
SchI GAGTC 1 cut(s) 640
SduI GDGCHC 7 cut(s) 36, 161, 575, 657, 769, 1215, 1278
SfaNI GCATC 1 cut(s) 1356
SfcI CTRYAG 2 cut(s) 50, 1109
SfoI GGCGCC 1 cut(s) 1295
Sfr274I CTCGAG 1 cut(s) 308
SinI GGWCC 5 cut(s) 241, 496, 817, 1679, 1710
SlaI CTCGAG 1 cut(s) 308
SmiMI CAYNNNNRTG 1 cut(s) 483
SmlI CTYRAG 4 cut(s) 308, 323, 788, 1445
SmoI CTYRAG 4 cut(s) 308, 323, 788, 1445
SphI GCATGC 1 cut(s) 567
Sse9I AATT 7 cut(s) 379, 448, 457, 731, 871, 931, 1622
SseBI AGGCCT 1 cut(s) 1077
SsiI CCGC 7 cut(s) 112, 282, 444, 463, 736, 989, 1046
SspDI GGCGCC 1 cut(s) 1293
SspMI CTAG 4 cut(s) 162, 1376, 1565, 1683
StuI AGGCCT 1 cut(s) 1077
StyI CCWWGG 5 cut(s) 161, 285, 984, 1682, 1713
TaaI ACNGT 4 cut(s) 647, 686, 1113, 1460
TaiI ACGT 3 cut(s) 39, 192, 267
TaqI TCGA 3 cut(s) 74, 108, 309
TasI AATT 7 cut(s) 379, 448, 457, 731, 871, 931, 1622
TatI WGTACW 2 cut(s) 1122, 1335
TauI GCSGC 3 cut(s) 284, 446, 992
TfiI GAWTC 4 cut(s) 414, 980, 1171, 1391
Tru1I TTAA 4 cut(s) 555, 681, 1316, 1587
Tru9I TTAA 4 cut(s) 555, 681, 1316, 1587
TscAI CASTG 4 cut(s) 657, 873, 1283, 1545
TseFI GTSAC 2 cut(s) 337, 1469
TseI GCWGC 2 cut(s) 937, 1493
Tsp45I GTSAC 2 cut(s) 337, 1469
TspDTI ATGAA 2 cut(s) 1397, 1734
TspGWI ACGGA 1 cut(s) 291
TspRI CASTG 4 cut(s) 657, 873, 1283, 1545
VpaK11BI GGWCC 5 cut(s) 241, 496, 817, 1679, 1710
XapI RAATTY 4 cut(s) 379, 457, 871, 931
XceI RCATGY 3 cut(s) 567, 1557, 1696
XhoI CTCGAG 1 cut(s) 308
XmaJI CCTAGG 2 cut(s) 161, 1682
XspI CTAG 4 cut(s) 162, 1376, 1565, 1683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.