FvH4_2g27880

Histone-lysine N-methyltransferase ASHH2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
22015520 .. 22028227
12708 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g27880.t5

Sequence Viewer

Length: 6339 bp
ATGGCTTCTTGCGAGGATTTGATTTCCGTGGAGGAGCCTCTGTGCGAGTCGCGTGGTACAGAGCAGCAGATGGGCTCGGAGATCTTGGTGGAGCAGCAAAGCTGCTTGGAGGCTCAGCCTGTACTTGATGGTAATGTGGATCCTACGAGTGCGGCGGATAGGTCTCTGGGGTTTTGGAGGAATGACAATGCTGGTTGTGTGAGCTGCAGTGAGGGTACGGAGTTGGGTGATGTGGAAAGGGAGGGTTTGGCGGGCGGTCTTGGAAGCACATGTGTTCTGGAGGCGGAAGATTTTTTGAACAGTGAGTATGTGAGCAGTAGGTGTGGTGATCAGAATGATGTGGATGGTGGTTGTGATACTGAAAGTGGCAGGATGCAGTTGAAGGAAGGCAACTGGTGCCGTGAGGATGGCTTTGCTGGTTCATTTGCCGACTGTGAAGTGCCCACGGAAGTCCTACCTTCTGCAGGGTCACCAGGAAATGGTATTCAACTGGATGATAAAAGTGGAAATGGTATTCAACTGGATGAGTGCAGGGATGATAAAAGTGGAAATGGTATTCAACTGGATGAGCGCAGGGATGATGAAAGTGCTAACTGTCTCTCTTCTGAAGGGATGGCGGAAGTTATGGAAGAGCAAGGTCAACTGCCCTTGGAATTTGTAGATGTAGATGTTTGTAGGGATTACAGCATCTTTTCTGGTAATTCATTGGAAGCTCCTTATGAGAAAAGTGTTGTTTCGACTGGAGTAGAAGATGTTGGTTTGTGCAACGGGATATCACCTGCACGGGATGGTCAAATGCCTTCAGAAGTATCAAACACTGGTGATATAGTGACTAACTTTAACTGGAATAACAAACATTTTGATGATAATGGTGTCAGTGGTGCAAGCAGCCTCTCTACTGAAAAGTCTACAGAGGTTTTTGAGGCATGCAACCAATTACTGCCTTCACTACGCTTTCAAAGGTCTTTGGAAGATTTGCAGATGCCTAATTCACCGAGTAATTTTGGCCAGCAGAGTGATCCAAAGAGTAATACTACAGTTGATGGCTCCTTGGCCGATGCTACAGAGTTCATGGAAGAGAAAAGCAATGTTATGTCAGATAAGGAGGCTGAAATTCACACCCAGATATCACCTGTAAAAGTAAATCTCTCCTGTTTGAAGGACAATTCCTCCAATGTAGCTCCCAACTGCATTATTGAGAATTCTGTTCCTCTGCAGTTGTGCGACACCTTCAGTATTGCTAATAACAGTGTTGATGGACTTTATGCTGACACTGTTGCAGAGGTTGTTGACATGAACAGCAATATTGTTGATGCATGCAATCAGACATTGTCTCCAGATTTACTGAGTGTTTGCACCCAAGAAAATGATCAGAGTAGTGATAAGGTTAAAGAATGTATGGAACAGAACGTTGATGGTATGACTGATATGAGGGTTGAAACTGGCACCCAGATATTACTAAAAGAGGAAAAGGCCTTCAATCTCACTGAAGGTTCTGCTGGATTAGTTCCCAACAGTACTATTGACAAATCTGTTGCCCTACAACTGCATCAACCCTTTGATATTGTCAGTAATGACTCTTCTAAGACGGTCAGTGTTCCAGATGTCAATTATTCTCCTGGTCATGTTGAATCTAGTACTTCATTTGACCATTCTGGACTGATGGATCATGGTGGAAATGAATATTTCAGAGTTGAACATTTGCCTAAAACCAATTTTTCTGAAATTATCGCATTGCCTGCTCAAAGGAGTGGTCGAAGCCGCAAGACTCCAACAAAAAAGGCTCCAAGGAAACGCAGGAATGCATCTAAAGTGTTACAACCCCTTGGAAGTGTTGAAAGTGTCTTCAAGGGTCCTGGAAGGAAGAGAAGCTGCCATTCCAAGCCACCCCGTTTATCTACCTGGGGATTATTGGGAAGTGTTACTCAATCCTTTGAGGAGAGTAATGGGCTGCAGGTCCATCAGATTTGTCAAGGTCAGAATGAAGGATCACAGATTCAAAGGGGTGGTCAAAGAAGTGGAAAACAGAAGCAAAGCGGGGCTAGTGGAAATTTACAATGGTCGAAGGGACCTTCAACTAATCATGTTCGTTTGAAGGTTAAATTTGGGAAAGAATTCAATAAAAATTCACTGTTTACCAAAGCTCCTGAGGTTGTTGATACCTCAACATCTGCAAATTCAATTCAAATAGTGAATGTTGTCGAAGATAATTGGAGACAGGAAGCGACTGTTAGGAAGTGTCAGTATACAAACAAGAAACTAGAGGAGGAAACTTGCCAGAATGGAGAACTTGCTAATAAGGACTTGGAGTGTGTTTCTGTTACAGAGAATTCAGCTGAAGATGAGATACAGAATTGTGCTGGGGTTCACTCTCATGCAATTGCTGTATCATCAGGAGGATCAGTTGGGAGTAGCTATAGGGACCCTGGAACTTCACCTGATTCTGAAGTTATCAATTTAATTCCAGAAGCACATGTGGAGGCAAGGCCTCAAGAAGATTGTCATGGTACTGTCTTCACTTCGGACAAAGTTTTATCTGCTTCTGGAGACTTTATAAGCAGTAAGAGAGAGAAGAAGAAACATAAACTCCCTTCTGCGGGAAATTGTGTTCAGGAAGACGGTTCACTGTCTCCATGCCCAGCTAGCACAATGAAAGCAAAACCATCAAAACATGATGGATGCAGACGGAACTGTATTCAAGATTTTTGCTTGGGTGAGACTTTCACTTTTTCCCCATGCGCAAAGGCTTCAAGTAACTCATCAAGTGACAAGGAATTTTATGTGGAACCCCTATGCTTGTCAGGAGAAAGTGACCATGGAGTTTCTAGAGAGGCTCTGACTGTGGAAAGGGGTGCAGAAGCTGAGACAGATTGCAATCTTGATGTGGTCTTAGGTTTACAATGTTCCAAGAATATGCTTCCTTCCTCTAACACCAAGGGGCAGAAGCCTCCCAAGGGTAAAACCAGAGGTTTTGACTCAGTGAGCAAGAGAAGTAGTACTCGTAAACCAAGGGAAAATGACCAGAATTCTGTTAATAAGAGAAAAGTCAAGGAGGACAAACAGCTTACGTGCAAGGTGGAAAGTCTCCCTGAATCAGGAGATCTGTTTGGAGATGCCAACTCTTCCCATGTTGCTGAGTGCATAGGTGTTCCTAACTTGGATGCAGTACCTGTTGGCTTAGATAAGCAGTATATACCCCCTCGGAATGCGTGGGTGCTCTGTGATGCTTGTAATAAATGGAGGCGAATACCAGCTGAACTTGCAGACTTCATAGATGAAACAAAGTGCACATGGACATGTAGAGAGAATCAGGACAGAGACTTTGCTGATTGCTCAATCCCTCAAGAGAAGTCAAATGCGGAGATTAATGCAGAGCTGGAAATATCTGATGCTTCAGGTGAAGAAGATGCTTCTGGCACCCGATTACATTATAAAACATTGGAATGCCGTCGGCCATCAGTTTCCCAACAGAACGTTGCATCTATTAAAACCAATCAGTTCCTTCACCGTAATCGTAAAAATCAGAGTATTGATGAGATAATGGTTTGCCATTGCAAACCACCTAAAGAAGGCCAGTTGGGTTGTGGAGAAGATTGCCTGAATCGAATGCTTAACATCGAGTGTGTTCGAGGAACCTGTCCCTGTAGAGATCTTTGTTCAAATCAACAGTTCCAAAAACGCCGATATTCCAAACTAGAGAAGTTTCGATGTGGGAAAAAGGGATTTGGGCTCAGATCGCTTGAGTACATTAGAAAAGGGCAGTTTCTTATTGAATATGTCGGAGAGGTGCTTGATACACATGCATATGAGGCACGACAAAAAGAGTACGCTGTGAAGGGTCACAGACATTTCTACTTCATGACACTGAATACCAGTGAGGTAATAGATGCATGTGCAAAGGGAAATTTGGGTCGCTTCATCAACCATAGTTGTGACCCGAATTGCCGCACTGAGAAGTGGATGGTGAATGGAGAGGTCTGTATTGGACTATTTGCATTAAGAGATATAAAGAAGGGTGAAGAGGTGACATTTGATTACAACTTCGTAAGGGTGATTGGAGCTGCTGCAAAGAAATGCCACTGTGGCTCTCCTCAGTGTCAGGGTTACATAGGCGGTGATCCTCTTAATACTGAAATCATTGTTCAAGATGATTCAGATGAAGAATATGTGGAGCCAGTGATGATCCCAGAAGATGGTGTAGCAGAAGATAGTAGGGGCAGTGCGGAGGCCAGACTTGATTCGTTAGATCACCAATATGGTGCGATAATCCAACACGAGGAGAGTGCATCTACAAATAAAGAAATCGATAGATCAACAATTTCTGTTTGCAAATTGGATATCACCATGCAGAGAAAGGAGTCTGAGAACCAATATTCATTGGAATTGCAGCACCCATTACCATCATTTGTCCAACCAGTTGAAGTTTTCCAACCAACAGAAGATGTAACTAGTAGATCCACGCCTGTTATTCAGCAGCAGGTTTTCAGGGAAATCGGGACTGCAGAAAAGTCCTCAAACTCCTGTGAAAGACCAGAGATTACTTCTCCAATAAAAGTGATCAGCAAACCTTTATCTGATGATATTGATGCTCCTGCATCAGATAGTAACAAAAACTCCAAGGTTAACACTTTTGAAGATGAGCAGCTTCTCTCTAAGGTGCATCGGAATGTGAAAACTTCTCATTCATCCAGTTTTGTGAAGAAAGGCAAAGTTAGGAGTACTCCTCTTAATACGAACAAAATTCAGGTGGTAGCCAATAAATCTCATGTGCTACCTTTCAAACCCAAAAGATCAATTGAAGGATCAGTTGAAGAAAAGCTTAACGAGCTGTTGGATACTGATGGAGGGATAAGTAAACGCAAAGATTCCGCTAAAGGCTACTTGAAGCTTCTGTTCCTTACTGCACAATCAGGTGATAGTGGCAGTGGGGAAGCAATCAAAAGCAATCGTGATCTTTCCATTATTCTTGACGCTCTTTTGAAGACGAAGTCGCGTACGGTTTTGATTGATATTATTAACAAAAATGGTTTGAGAATGCTACACAACATTATGAAGATGTGCAGGAGAGACTTTAACAAGATACCAATCCTCCGAAAGCTCTTAAAGGTCCTAGAATATTTGGCTGAAAAGCCGCAGATTCTTACACAGGAACATATTACTGGAGGTCCTCCCTGCCCGGGAATGGAGAGCTTTACAGAGTCAATACTATCACTGACGGAGCATGGTGACAAAAGGGTCCATGACATAGCACGCAACTTTCGAAATAGGTGGATTCCAAAAGCTTTAAGAAGACATTGTTTTGTAGACAGAGATGATGGAAAGATGGAATTCAACAGGAGTTCAAACTACAATAGATTCCCCACATCACATGATAATTGGCGTGATCAAACTGGAAGATCTACTGAAGTTGCTGATAGTGCCAAGCAATCAGTGGTTAAAACACCACCTTCTGCTAGTACAGTTACTCAGGACGGCGCTTCTACACCTTGTACAGGTGGTTGTACAACCACTGAGACAAAAGTACGCAAGCGTAAAAGTCGATGGGATCAGCCAGCAGTGACAGTCCCTGATTCAAAAAGTCGATGGGATCAGCCAGCAGTTACATGCCCTGATTCAAGTTTACATCCAAACAAGGAACAGAAGATCAACTGTAAACAGCTAGAAGGGGATGCAACATTGCTTCCTGAGAACCAGAGCAGAGAGGGTGGAAATTGCTCCAGCACTGTGCTTCATATATGTGAGCAAGTTGGTGCCGATGTGGTTTACGCAGGAAAACAAAACATTCTTGATGATGCTCCTCCTGGATTTTCATCTTGCCTTAATACCCCTGTTGTTTCATATTTGTCAACATCTTCAGTTATAGGGCATCCGCAGGCAAAGTTTGTTTCTCGCTTACCTGTCTCGTATGGCATTCCACTGTCTATCATGCAGCAATATGGGACACCCCATGCTGAAACCGCTGATACTTGGGTTGTTGCTCCTGGCATGCCTTTCCATCCTTTTCCACCATTACCCCCATGTCCTCGTCATAAGAAAGACCCTTCTCATGATGTCCGTCACGCCTCAGTTAACCAAGCTTCAGAAGGACAACAAGCCAGCTGTGACACTACAAATTGTCACTCTGAAGAAAGCACTCCAAGCACAACTGGTGTCACTCAAGCAGACTCTGGCACACCATGTGCAAACAATCAATCGGGTATTAAACGAGAGAGGGAGTCCTCATATGAGGCCCCTTTGGGAAGGAGATACTTTAAACAGCAGAAGTGGAATCATCCAAAACTTAGGCCCCCATGGATGAGGGATAGGACTGGTTGGGGATGTAATGGGAACAACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001763 GO:0002682 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006479 GO:0006629 GO:0006720 GO:0006721 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009553 GO:0009555 GO:0009653 GO:0009791 GO:0009893 GO:0009908 GO:0009909 GO:0009910 GO:0009987 GO:0010016 GO:0010223 GO:0010346 GO:0010363 GO:0010452 GO:0010468 GO:0010604 GO:0010638 GO:0010941 GO:0016043 GO:0016108 GO:0016116 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0022414 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0032259 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0034968 GO:0035670 GO:0036211 GO:0040029 GO:0042054 GO:0042800 GO:0043067 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045088 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048443 GO:0048466 GO:0048467 GO:0048481 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048581 GO:0048583 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050776 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051247 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090567 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1905269 GO:1905393 GO:2000026 GO:2000241 GO:2000242 GO:2001252
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

2113

Amino Acids

232.27

Weight (kDa)

5.5

Isoelectric Point (pI)

50.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CW PF07496 1071 - 1117 3.8e-11 CW-type Zinc Finger
AWS PF17907 1192 - 1227 1.5e-12 AWS domain
SET PF00856 1241 - 1347 2.1e-26 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2555, 3432
AarI CACCTGC 1 cut(s) 787
AasI GACNNNNNNGTC 1 cut(s) 5234
Acc16I TGCGCA 1 cut(s) 2740
Acc36I ACCTGC 3 cut(s) 787, 1945, 4468
AccB1I GGYRCC 4 cut(s) 396, 1445, 3416, 5750
AccB7I CCANNNNNTGG 2 cut(s) 479, 4193
AccI GTMKAC 3 cut(s) 908, 2246, 5304
AccII CGCG 2 cut(s) 52, 4993
AclI AACGTT 2 cut(s) 1410, 3474
AcoI YGGCCR 3 cut(s) 1006, 1053, 3452
AdeI CACNNNGTG 1 cut(s) 6179
AflIII ACRYGT 3 cut(s) 269, 2473, 3296
AhlI ACTAGT 1 cut(s) 4448
AjnI CCWGG 7 cut(s) 472, 1618, 1855, 1901, 2425, 5800, 5980
AloI GAACNNNNNNTCC 2 cut(s) 2592, 2624
Alw21I GWGCWC 2 cut(s) 3219, 3290
Alw44I GTGCAC 1 cut(s) 3286
AlwNI CAGNNNCTG 4 cut(s) 2861, 3170, 5567, 6167
Ama87I CYCGRG 1 cut(s) 5176
AoxI GGCC 9 cut(s) 1006, 1053, 1473, 2486, 3452, 3571, 4227, 6228, 6284
ApaLI GTGCAC 1 cut(s) 3286
ArsI GACNNNNNNTTYG 6 cut(s) 1738, 1770, 1993, 2025, 3305, 3337
AseI ATTAAT 1 cut(s) 3366
Asp700I GAANNNNTTC 2 cut(s) 2114, 6332
AspLEI GCGC 3 cut(s) 573, 2741, 5477
AspS9I GGNCC 9 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236, 6229, 6285
AsuC2I CCSGG 2 cut(s) 5177, 5178
AsuII TTCGAA 1 cut(s) 5260
AsuNHI GCTAGC 1 cut(s) 2642
AvaI CYCGRG 1 cut(s) 5176
AvaII GGWCC 7 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236
AxyI CCTNAGG 1 cut(s) 2148
BaeGI GKGCMC 2 cut(s) 444, 3290
BaeI ACNNNNGTAYC 2 cut(s) 5955, 5988
BalI TGGCCA 1 cut(s) 1008
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 4 cut(s) 396, 1445, 3416, 5750
BanII GRGCYC 2 cut(s) 77, 3732
BarI GAAGNNNNNNTAC 4 cut(s) 1564, 1596, 2331, 2363
BauI CACGAG 1 cut(s) 4274
BbsI GAAGAC 5 cut(s) 1837, 2506, 2622, 4988, 5296
Bbv12I GWGCWC 2 cut(s) 3219, 3290
BceAI ACGGC 3 cut(s) 384, 3432, 5488
BcgI CGANNNNNNTGC 2 cut(s) 4265, 4299
BciT130I CCWGG 7 cut(s) 474, 1620, 1857, 1903, 2427, 5802, 5982
BciVI GTATCC 1 cut(s) 4828
BclI TGATCA 4 cut(s) 328, 1369, 4557, 5383
BcnI CCSGG 2 cut(s) 5177, 5178
BcuI ACTAGT 1 cut(s) 4448
BfoI RGCGCY 1 cut(s) 5478
BfuAI ACCTGC 3 cut(s) 787, 1945, 4468
BfuI GTATCC 1 cut(s) 4828
BglI GCCNNNNNGGC 1 cut(s) 4083
BglII AGATCT 4 cut(s) 81, 3100, 3649, 5396
BlpI GCTNAGC 1 cut(s) 114
BmcAI AGTACT 4 cut(s) 1519, 1639, 2998, 4720
Bme1390I CCNGG 9 cut(s) 474, 1620, 1857, 1903, 2427, 5177, 5178, 5802, 5982
Bme18I GGWCC 7 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236
BmeT110I CYCGRG 1 cut(s) 5176
BmgT120I GGNCC 9 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236, 6229, 6285
BmrFI CCNGG 9 cut(s) 474, 1620, 1857, 1903, 2427, 5177, 5178, 5802, 5982
BmtI GCTAGC 1 cut(s) 2646
BpiI GAAGAC 5 cut(s) 1837, 2506, 2622, 4988, 5296
BplI GAGNNNNNCTC 2 cut(s) 4708, 4740
BpmI CTGGAG 6 cut(s) 299, 762, 1320, 2565, 5181, 5701
Bpu1102I GCTNAGC 1 cut(s) 114
Bpu14I TTCGAA 1 cut(s) 5260
BpuEI CTTGAG 4 cut(s) 2475, 3327, 3761, 6141
BpuMI CCSGG 2 cut(s) 5177, 5178
Bsa29I ATCGAT 1 cut(s) 4305
BsaAI YACGTR 1 cut(s) 3069
BsaBI GATNNNNATC 3 cut(s) 2874, 5084, 5809
BsaI GGTCTC 1 cut(s) 168
Bse21I CCTNAGG 1 cut(s) 2148
Bse3DI GCAATG 4 cut(s) 1093, 1733, 3550, 5675
Bse8I GATNNNNATC 3 cut(s) 2874, 5084, 5809
BseBI CCWGG 7 cut(s) 474, 1620, 1857, 1903, 2427, 5802, 5982
BseCI ATCGAT 1 cut(s) 4305
BseJI GATNNNNATC 3 cut(s) 2874, 5084, 5809
BseMI GCAATG 4 cut(s) 1093, 1733, 3550, 5675
BseRI GAGGAG 7 cut(s) 47, 1952, 2279, 4080, 4292, 4713, 5787
BseSI GKGCMC 2 cut(s) 444, 3290
BseYI CCCAGC 2 cut(s) 2360, 2638
BsgI GTGCAG 5 cut(s) 550, 765, 2874, 4887, 5080
Bsh1236I CGCG 2 cut(s) 52, 4993
BshFI GGCC 9 cut(s) 1008, 1055, 1475, 2488, 3454, 3573, 4229, 6230, 6286
BshNI GGYRCC 4 cut(s) 396, 1445, 3416, 5750
BshVI ATCGAT 1 cut(s) 4305
BsiHKAI GWGCWC 2 cut(s) 3219, 3290
BsiHKCI CYCGRG 1 cut(s) 5176
BsiSI CCGG 1 cut(s) 5177
BsiWI CGTACG 1 cut(s) 4994
BslFI GGGAC 6 cut(s) 2082, 2435, 3624, 4510, 5549, 5953
BsmFI GGGAC 6 cut(s) 2082, 2435, 3624, 4510, 5549, 5953
BsmI GAATGC 6 cut(s) 1807, 3211, 3449, 3612, 5040, 5910
BsnI GGCC 9 cut(s) 1008, 1055, 1475, 2488, 3454, 3573, 4229, 6230, 6286
Bso31I GGTCTC 1 cut(s) 168
BsoBI CYCGRG 1 cut(s) 5176
Bsp119I TTCGAA 1 cut(s) 5260
Bsp1286I GDGCHC 5 cut(s) 77, 444, 3219, 3290, 3732
Bsp1407I TGTACA 2 cut(s) 5489, 5501
Bsp1720I GCTNAGC 1 cut(s) 114
Bsp19I CCATGG 2 cut(s) 2815, 6290
BspANI GGCC 9 cut(s) 1008, 1055, 1475, 2488, 3454, 3573, 4229, 6230, 6286
BspDI ATCGAT 1 cut(s) 4305
BspFNI CGCG 2 cut(s) 52, 4993
BspHI TCATGA 2 cut(s) 3858, 6046
BspMAI CTGCAG 5 cut(s) 209, 466, 1218, 1956, 4504
BspMI ACCTGC 3 cut(s) 787, 1945, 4468
BspOI GCTAGC 1 cut(s) 2646
BspQI GCTCTTC 1 cut(s) 624
BspT104I TTCGAA 1 cut(s) 5260
BspT107I GGYRCC 4 cut(s) 396, 1445, 3416, 5750
BspTNI GGTCTC 1 cut(s) 168
BsrDI GCAATG 4 cut(s) 1093, 1733, 3550, 5675
BsrGI TGTACA 2 cut(s) 5489, 5501
BssNAI GTATAC 1 cut(s) 2247
BssSI CACGAG 1 cut(s) 4274
Bst1107I GTATAC 1 cut(s) 2247
Bst2BI CACGAG 1 cut(s) 4274
Bst2UI CCWGG 7 cut(s) 474, 1620, 1857, 1903, 2427, 5802, 5982
Bst6I CTCTTC 7 cut(s) 607, 624, 1071, 1585, 1859, 3127, 4014
BstAPI GCANNNNNTGC 2 cut(s) 396, 1739
BstAUI TGTACA 2 cut(s) 5489, 5501
BstBAI YACGTR 1 cut(s) 3069
BstBI TTCGAA 1 cut(s) 5260
BstDSI CCRYGG 4 cut(s) 27, 444, 2815, 6290
BstEII GGTNACC 1 cut(s) 468
BstENI CCTNNNNNAGG 4 cut(s) 462, 3093, 3567, 5490
BstFNI CGCG 2 cut(s) 52, 4993
BstH2I RGCGCY 1 cut(s) 5478
BstHHI GCGC 3 cut(s) 573, 2741, 5477
BstNI CCWGG 7 cut(s) 474, 1620, 1857, 1903, 2427, 5802, 5982
BstNSI RCATGY 9 cut(s) 273, 930, 1320, 2477, 3300, 3803, 3894, 5607, 5989
BstPI GGTNACC 1 cut(s) 468
BstSCI CCNGG 9 cut(s) 472, 1618, 1855, 1901, 2425, 5175, 5176, 5800, 5980
BstSLI GKGCMC 2 cut(s) 444, 3290
BstUI CGCG 2 cut(s) 52, 4993
BstV2I GAAGAC 5 cut(s) 1837, 2506, 2622, 4988, 5296
BstX2I RGATCY 6 cut(s) 81, 139, 3100, 3649, 4454, 5396
BstYI RGATCY 6 cut(s) 81, 139, 3100, 3649, 4454, 5396
BstZ17I GTATAC 1 cut(s) 2247
Bsu15I ATCGAT 1 cut(s) 4305
Bsu36I CCTNAGG 1 cut(s) 2148
BsuI GTATCC 1 cut(s) 4828
BsuRI GGCC 9 cut(s) 1008, 1055, 1475, 2488, 3454, 3573, 4229, 6230, 6286
BsuTUI ATCGAT 1 cut(s) 4305
BtgI CCRYGG 4 cut(s) 27, 444, 2815, 6290
BtsI GCAGTG 4 cut(s) 214, 4225, 4930, 5562
BveI ACCTGC 3 cut(s) 787, 1945, 4468
CaiI CAGNNNCTG 4 cut(s) 2861, 3170, 5567, 6167
CciI TCATGA 2 cut(s) 3858, 6046
CfoI GCGC 3 cut(s) 573, 2741, 5477
Cfr13I GGNCC 9 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236, 6229, 6285
Cfr9I CCCGGG 1 cut(s) 5176
ClaI ATCGAT 1 cut(s) 4305
CseI GACGC 1 cut(s) 4979
DraI TTTAAA 1 cut(s) 6253
DraIII CACNNNGTG 1 cut(s) 6179
DrdI GACNNNNNNGTC 1 cut(s) 5234
DseDI GACNNNNNNGTC 1 cut(s) 5234
EaeI YGGCCR 3 cut(s) 1006, 1053, 3452
Eam1104I CTCTTC 7 cut(s) 607, 624, 1071, 1585, 1859, 3127, 4014
EarI CTCTTC 7 cut(s) 607, 624, 1071, 1585, 1859, 3127, 4014
EciI GGCGGA 3 cut(s) 170, 299, 632
Eco147I AGGCCT 2 cut(s) 1475, 2488
Eco24I GRGCYC 2 cut(s) 77, 3732
Eco31I GGTCTC 1 cut(s) 168
Eco32I GATATC 3 cut(s) 774, 1128, 4339
Eco47I GGWCC 7 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236
Eco81I CCTNAGG 1 cut(s) 2148
Eco88I CYCGRG 1 cut(s) 5176
Eco91I GGTNACC 1 cut(s) 468
EcoNI CCTNNNNNAGG 4 cut(s) 462, 3093, 3567, 5490
EcoO109I RGGNCCY 7 cut(s) 1853, 2069, 2422, 5107, 5165, 6229, 6285
EcoO65I GGTNACC 1 cut(s) 468
EcoRI GAATTC 5 cut(s) 1201, 2114, 2329, 3025, 5327
EcoRII CCWGG 7 cut(s) 472, 1618, 1855, 1901, 2425, 5800, 5980
EcoRV GATATC 3 cut(s) 774, 1128, 4339
EcoT22I ATGCAT 4 cut(s) 1318, 1807, 3805, 3892
EcoT38I GRGCYC 2 cut(s) 77, 3732
FalI AAGNNNNNCTT 2 cut(s) 4803, 4835
FaqI GGGAC 6 cut(s) 2082, 2435, 3624, 4510, 5549, 5953
FauI CCCGC 3 cut(s) 244, 2030, 2590
FauNDI CATATG 2 cut(s) 3805, 6223
FbaI TGATCA 4 cut(s) 328, 1369, 4557, 5383
FblI GTMKAC 3 cut(s) 908, 2246, 5304
FriOI GRGCYC 2 cut(s) 77, 3732
FspI TGCGCA 1 cut(s) 2740
GlaI GCGC 3 cut(s) 572, 2740, 5476
GsaI CCCAGC 2 cut(s) 2364, 2642
GsuI CTGGAG 6 cut(s) 299, 762, 1320, 2565, 5181, 5701
HaeII RGCGCY 1 cut(s) 5478
HaeIII GGCC 9 cut(s) 1008, 1055, 1475, 2488, 3454, 3573, 4229, 6230, 6286
HapII CCGG 1 cut(s) 5177
HgaI GACGC 1 cut(s) 4979
HhaI GCGC 3 cut(s) 573, 2741, 5477
Hin6I GCGC 3 cut(s) 571, 2739, 5475
HinP1I GCGC 3 cut(s) 571, 2739, 5475
HincII GTYRAC 5 cut(s) 641, 1291, 4624, 5847, 6070
HindII GTYRAC 5 cut(s) 641, 1291, 4624, 5847, 6070
HindIII AAGCTT 4 cut(s) 4817, 4886, 5280, 6075
HpaI GTTAAC 2 cut(s) 4624, 6070
HpaII CCGG 1 cut(s) 5177
Hpy99I CGWCG 1 cut(s) 3453
HpyCH4IV ACGT 3 cut(s) 1410, 3068, 3474
HpySE526I ACGT 3 cut(s) 1410, 3068, 3474
HspAI GCGC 3 cut(s) 571, 2739, 5475
KflI GGGWCCC 1 cut(s) 2422
Ksp22I TGATCA 4 cut(s) 328, 1369, 4557, 5383
KspAI GTTAAC 2 cut(s) 4624, 6070
LguI GCTCTTC 1 cut(s) 624
MaeII ACGT 3 cut(s) 1410, 3068, 3474
MfeI CAATTG 2 cut(s) 2379, 4794
MflI RGATCY 6 cut(s) 81, 139, 3100, 3649, 4454, 5396
MhlI GDGCHC 5 cut(s) 77, 444, 3219, 3290, 3732
MlsI TGGCCA 1 cut(s) 1008
MluNI TGGCCA 1 cut(s) 1008
MlyI GAGTC 8 cut(s) 56, 1571, 1762, 2969, 4367, 5207, 6158, 6224
MmeI TCCRAC 6 cut(s) 1796, 3760, 4294, 4435, 4453, 4812
Mox20I TGGCCA 1 cut(s) 1008
Mph1103I ATGCAT 4 cut(s) 1318, 1807, 3805, 3892
MroXI GAANNNNTTC 2 cut(s) 2114, 6332
MscI TGGCCA 1 cut(s) 1008
MslI CAYNNNNRTG 9 cut(s) 861, 2373, 3295, 3442, 3804, 3930, 4254, 4665, 5736
Msp20I TGGCCA 1 cut(s) 1008
MspA1I CMGCKG 4 cut(s) 2336, 3254, 5960, 6099
MspI CCGG 1 cut(s) 5177
MspR9I CCNGG 9 cut(s) 474, 1620, 1857, 1903, 2427, 5177, 5178, 5802, 5982
MunI CAATTG 2 cut(s) 2379, 4794
Mva1269I GAATGC 6 cut(s) 1807, 3211, 3449, 3612, 5040, 5910
MvaI CCWGG 7 cut(s) 474, 1620, 1857, 1903, 2427, 5802, 5982
MvnI CGCG 2 cut(s) 52, 4993
NciI CCSGG 2 cut(s) 5177, 5178
NcoI CCATGG 2 cut(s) 2815, 6290
NdeI CATATG 2 cut(s) 3805, 6223
NheI GCTAGC 1 cut(s) 2642
NsbI TGCGCA 1 cut(s) 2740
NsiI ATGCAT 4 cut(s) 1318, 1807, 3805, 3892
NspI RCATGY 9 cut(s) 273, 930, 1320, 2477, 3300, 3803, 3894, 5607, 5989
NspV TTCGAA 1 cut(s) 5260
PaeI GCATGC 3 cut(s) 930, 1320, 5989
PagI TCATGA 2 cut(s) 3858, 6046
PaqCI CACCTGC 1 cut(s) 787
PceI AGGCCT 2 cut(s) 1475, 2488
PciI ACATGT 3 cut(s) 269, 2473, 3296
PciSI GCTCTTC 1 cut(s) 624
PcsI WCGNNNNNNNCGW 1 cut(s) 5257
PctI GAATGC 6 cut(s) 1807, 3211, 3449, 3612, 5040, 5910
PdmI GAANNNNTTC 2 cut(s) 2114, 6332
Pfl23II CGTACG 1 cut(s) 4994
PflFI GACNNNGTC 2 cut(s) 1330, 4987
PflMI CCANNNNNTGG 2 cut(s) 479, 4193
PfoI TCCNGGA 2 cut(s) 1855, 5800
PleI GAGTC 8 cut(s) 55, 1571, 1762, 2969, 4366, 5206, 6158, 6223
PpsI GAGTC 8 cut(s) 55, 1571, 1762, 2969, 4366, 5206, 6158, 6223
Ppu21I YACGTR 1 cut(s) 3069
PpuMI RGGWCCY 5 cut(s) 1853, 2069, 2422, 5107, 5165
PscI ACATGT 3 cut(s) 269, 2473, 3296
PshBI ATTAAT 1 cut(s) 3366
PsiI TTATAA 2 cut(s) 2555, 3432
Psp1406I AACGTT 2 cut(s) 1410, 3474
Psp5II RGGWCCY 5 cut(s) 1853, 2069, 2422, 5107, 5165
Psp6I CCWGG 7 cut(s) 472, 1618, 1855, 1901, 2425, 5800, 5980
PspEI GGTNACC 1 cut(s) 468
PspFI CCCAGC 2 cut(s) 2360, 2638
PspGI CCWGG 7 cut(s) 472, 1618, 1855, 1901, 2425, 5800, 5980
PspLI CGTACG 1 cut(s) 4994
PspPI GGNCC 9 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236, 6229, 6285
PspPPI RGGWCCY 5 cut(s) 1853, 2069, 2422, 5107, 5165
PstI CTGCAG 5 cut(s) 209, 466, 1218, 1956, 4504
PstNI CAGNNNCTG 4 cut(s) 2861, 3170, 5567, 6167
PsuI RGATCY 6 cut(s) 81, 139, 3100, 3649, 4454, 5396
PsyI GACNNNGTC 2 cut(s) 1330, 4987
PvuII CAGCTG 3 cut(s) 2336, 3254, 6099
RseI CAYNNNNRTG 9 cut(s) 861, 2373, 3295, 3442, 3804, 3930, 4254, 4665, 5736
SapI GCTCTTC 1 cut(s) 624
Sau96I GGNCC 9 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236, 6229, 6285
ScaI AGTACT 4 cut(s) 1519, 1639, 2998, 4720
SchI GAGTC 8 cut(s) 56, 1571, 1762, 2969, 4367, 5207, 6158, 6224
ScrFI CCNGG 9 cut(s) 474, 1620, 1857, 1903, 2427, 5177, 5178, 5802, 5982
SduI GDGCHC 5 cut(s) 77, 444, 3219, 3290, 3732
SfuI TTCGAA 1 cut(s) 5260
SinI GGWCC 7 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236
SmaI CCCGGG 1 cut(s) 5178
SmiMI CAYNNNNRTG 9 cut(s) 861, 2373, 3295, 3442, 3804, 3930, 4254, 4665, 5736
SmlI CTYRAG 4 cut(s) 2490, 3342, 3740, 6156
SmoI CTYRAG 4 cut(s) 2490, 3342, 3740, 6156
SpeI ACTAGT 1 cut(s) 4448
SphI GCATGC 3 cut(s) 930, 1320, 5989
SseBI AGGCCT 2 cut(s) 1475, 2488
SspI AATATT 4 cut(s) 1306, 1685, 4373, 5117
StuI AGGCCT 2 cut(s) 1475, 2488
StyD4I CCNGG 9 cut(s) 472, 1618, 1855, 1901, 2425, 5175, 5176, 5800, 5980
TaiI ACGT 3 cut(s) 1413, 3071, 3477
TatI WGTACW 9 cut(s) 121, 1517, 1637, 2996, 3744, 4718, 5456, 5489, 5501
TauI GCSGC 4 cut(s) 155, 1764, 3948, 5134
TspGWI ACGGA 6 cut(s) 16, 233, 461, 2701, 5231, 6044
TspMI CCCGGG 1 cut(s) 5176
Tth111I GACNNNGTC 2 cut(s) 1330, 4987
Van91I CCANNNNNTGG 2 cut(s) 479, 4193
VneI GTGCAC 1 cut(s) 3286
VpaK11BI GGWCC 7 cut(s) 1853, 1957, 2069, 2422, 5107, 5165, 5236
VspI ATTAAT 1 cut(s) 3366
XagI CCTNNNNNAGG 4 cut(s) 462, 3093, 3567, 5490
XbaI TCTAGA 1 cut(s) 2825
XceI RCATGY 9 cut(s) 273, 930, 1320, 2477, 3300, 3803, 3894, 5607, 5989
XcmI CCANNNNNNNNNTGG 2 cut(s) 3581, 5428
XmaI CCCGGG 1 cut(s) 5176
XmiI GTMKAC 3 cut(s) 908, 2246, 5304
XmnI GAANNNNTTC 2 cut(s) 2114, 6332
ZrmI AGTACT 4 cut(s) 1519, 1639, 2998, 4720
Zsp2I ATGCAT 4 cut(s) 1318, 1807, 3805, 3892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.