Rroxscaffold_7G00171210

Histone-lysine N-methyltransferase ASHH2-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
11539849 .. 11553596
13748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00171210.1

Sequence Viewer

Length: 6330 bp
ATGGCCTCGTCTGGAAACTTGATGTTCGTGGACGAGCCTCGGTGCGAGTCGTTTGGTACCGAGCAGATGGGCTCGGAGATCTTGGTGGAAAGTGTTTCTGAGCAGAACAACTGCTTGGAGGCTCAGCCTTTACTTGGTCGTAATGTGGACCTTACCAGTGAGGCGGACGTGTCTTCGGGGTTTTGTAGGAATGACAATGCTGGTTGTGTGAGCTGCAGTGAGGTGACGGAGTTGGGTACTGGCGATAGAGATGGTTTGGCGGGTGGTGGTGAAAGTACGAGTGTTATGGAGCCAGAAGATTTTTTGAACAGTGAGTATGGGATCAATAGGTGTGGCTTGGATGAGAATCAGAATGATGTGGATGGTTGTTCTAATATCGAAAGTGGCGGGATGCAGTTGAAGGAAGGCTGGTGTCGTGAGGATGGCTTTGCCAGTTCATTTGACGATTGTGAAGTGCCCTCAGAAGTCATACCTTCCACAGGGTCACCAGGAAATGGTATTCAGCTGGATGAGCACACGGATGATAAAAGTGCTAATCGTCTATCTTCTGAAGGAATGATGGAAGTTATGGAAGAGCAAGGTAAATTGCCCTTGGAATTTGTAGACATTGATGTTTGTAGGGTTTACAACATCTTTTCTGGTAATTCATTGGAAGCTGCTGATGAAAAAAGTGTTGCTTTCACTGGGATAGAAGCTGGTGGTTTGTGCAACGGGACATCACCTGCACAGGATGGTGGAATGCCTTCAGAAGTATCAAACACAGGTGATCTAGTGACTAACTGTAACTGGAATAAAGAACATATTGACGATAATGGTGTCAGTGGTGTAAGCGGGCTCTCTACTGAAAAGTCTACAGAGGTTTCTGAGGCATGCAACCAAATGTTGCCGTCACTGAGTTTTCAAAGGTCTTTGGAAGATTTGCACATGCCTAATTCACTGAGTAATTTTGCCCAGCAGAGTGATCCAAGGAGTAATAATACAGTTGGTGGTTCCTTGGCTGATAGGGCTACAGAATTTATGGAAGAGAAAAGTAATGTTATGACAGACAAGGAGGCTGAAATTCACACCCAGATATCTCCTGTAAAAGTTAATGTCTCCTGTTCGAAGGAAAATTCCTCCAATGTAGCTCCCAACTGCATTATTGAGAATTCTGTTCCTCCTCAGTCATGCGATGCCTTCAGTATTGCTAATAATGGTGTCAATGGACATTATGCTGATAGTGTTACAGAGGTTGTTGACATGAAAAGCAATATTGTTGATGCATGCAATCAAACATTGCCTCCAGATTTACTGAGTGTTTGCACCCAAGAGAATGATCAGAGTAGTGATAAGGTTAAAGAATGTGTGGAACAGAAAGTTGATGGTACGACTGATATGAGGGTTGAAACTGGCACTCAGATGTTACTAAAAGAGGAAAAGGCCTCCAATCTCACCAAAGATTCTGCTGGATTATTTCCCAACAGTACTATTGAGAATTCTGTTCCTCCGCAACTGCATCAACCTTTTGATATTGTCAGTAATGACTCTTCTAAGACGGTTGATGTTCCAGATATCAATGATTCTCCTGGTCATGTTGAATCGAGTACTTCATTTGACCATTCTGGACTGATGGATCATGAAGGAAATGATAATTTCAGAGTTGAGTTTTTTTCTAAAACTAATTTTCCTGAAATTATTGCATTGCCTGCTCAAAGGAGTGGCCGAAGCCGCAAGACTCCGACAAAAAAGGCTCCAAGGAAACGCAGGAATGCATCTAAAGTGTTACAACCTCTTGGAAGTGTTGAAAGTGTCTTTAAAGGTGCTGGAAGGAAGAGAAGCTGCCTTTCCAAACCACCTCGTTCTTCTACCTGGGGATTATTGGGAAGTGTCACTCAATCCTTTGAGGAGAGTAATGGGCTTCAGGTCCATCAGGTTTGTCAAAGTCAGAATGAAGGATCACAGAAACGAAGGGGTGGTCGAAGAAGTGGAAAACAGAAGCAAAGTGTGGCTAGTGGAAATTTTCAAGGGTCTAGGGGAACTTCAACTAATCATGTTCGTTTGAAGGTTAAATTTGGGAAAGAAGTCGATAAAAATTTACTGTATAACAAAGCAGCTGAGTTTGTTGATACCTCGGCATCTGCAAATTCTATTCAAATAGTGAATGTTGTTGAAGGTAATTGGAGACAAGAAGCGACTGTTAGGAAGTGTCAGCATACAAACAAGAAACTAGAGAAGGATGAAACTTGCCAGGATGGAGAACTGGCTAATAAGGACTTGGAGACTGTTTCTGTTACAGAGATTTCAGCTGAAAATGAGATACAGAATTGTCTTGTGGTTCCCTCTCATGCAATTGCTATATTATCAGGAGGATCAGTTGGGAGTAGCTATAGAGACCCTGGAACTTCACCTGATTCTGAAGTTATCAATTTAATTCCAGAAGCACATGTGGAGGCAAGGCCACAAGAAGATTCTCATGGTACTGATTTGACTTCAGACAAAGTTTTATCTGCTTTTGGAGACTTTATTAGCAGTAAGAGAGGAAAGAAGAAACATAAACTCCCTTATGCGGGAAATTGTGTTCCGGAAGATGGTTCACCGTGTCCATGCCCAGCTAGCACAATGAGAGCAAAACCATCAACACGTGATGGATGTAGACAGAATGGTAGTCAAGATATTTGCTCTGGTGAGACTTTTACTTCATCCCCAGGTGCAAAGGCTTCAACTAACTCATCAAGTGACAGGGACTTGTCTGTGGAACCCCTGTGCTTGTCAGGAGGAAGTGACCACGGAGTGGAGAGGGGTGCAGAAGCTGAGACGGATTGCATTCTTGATGTGGGCTTAGGTTTGCATAATTCCCAGAATATGCTTCCTTCCTCTAACACCAAGAGGCAGAAGCCTCCCAAGGGCAAATCGAGAGGTTCTGACTCAGCGAGTAAGAGAAGTAATACTCGTAAACCAAGGGAAAAAGAGCAGAAGTCTGTTAATAAGAAAAAAGTCAAGGAGGACAAACAGCTTGCCTGCAAGGTGGAAAGTCTCCCTGAATCAGGAGATCCCTTAGCAGATGCCAACACTTCCCATGTTGCTGAGTGCATAGGTGTTCCTAACTTGGACGTTGTACCTGTTGACTTAGATAAGCAGTATGTACCCCCTCGGAATGCGTGGGTGCTCTGTGATGCTTGTAATAAATGGAGGCGTATACCAGCTGAACTTGCAGATTTTATAGATGAAACAAAGTGCACATGGACCTGTAGAGAGAATCAGGACAGAGACTTTGCTGATTGCTCAATTCCTCAAGAGAAGTCAAATGCAGAGATTAATGCAGAGTTGGAAATATCTGATGCTTCAGGCGAAGAAGATGCTTCTGGCACCCGATTACATTATAAAACATTGGAATGCCGTCGTCCGTCAGTTTCCCAACAGAATGTTGCATCTATTAAAACCAATCAGTTCCTTCACCGTAATCGTAAAAATCAGAGTATTGATGAGATAATGGTTTGTCATTGCAAACTACCTAAAGATGGCCAGTTGGGTTGTGGAGAAGATTGCCTGAATCGAATGCTTAACATCGAATGTGTTCGAGGAACCTGTCCATGTGGAGATCTTTGTTCAAATCAACAGTTCCAAAAACGCCGATATTCCAAACTAGAGAAGTTTCGAAGTGGGAAGAAGGGATTTGGTCTCAGATCGCTTGAGCATATATGTAAAGGGCAGTTTCTTATTGAATATGTTGGAGAGGTGCTTGATACACATGCTTATGAGGCACGACAAAAAGAGTACGCTGTAAAGGGTCACAGACATTTCTACTTTATGACATTGAATACCAGTGAGGTAATAGATGCATGTGCAAAGGGAAATTTGGGGCGATTCATCAACCATAGTTGCGATCCGAACTGTCGCACCGAGAAGTGGATGGTGAACGGAGAGGTCTGTATAGGACTATTTGCACTAAGAGATATAAAGAAGGGTGAAGAGGTGACATTTGACTACAACTTCGTAAGGGTGATTGGAGCCGCTGCAAAGAAATGTTATTGTGGTTCACCTCACTGTCAGGGTTACATAGGTGGTGATCCTCTTAATACTGAAATCATTGTTCAAGATGATTCAGATGAAGAATATGTGGAGCCTGTGATGATCCCAGAAGATGGTGTAGCGGAAGATAGTAGAGGCAATGCAGTGGCCAGACTCGATTCCTTAGATGGTGCGATAATCCAACGTGAGGAGAGTGCATCTACAAATAAAGACATTGATAAATCAACAATTTCTGTTGGTAAATTGGAGATTACCACACACAGAGAGGAGTCCGTGGAATTGCAGCACTTGCTGCCATCTTTTGTCCAACCAGTTGAAGCGTTCCAACAGACAGAAGATGTAACTAGTAGATCCACGCCTGTTGTTCGGCAGGAGGTTTTCAGGGAAAAGGAGACTACAGAAAAATCCTCGGACTCCTTTGAAAGACCAGAGATTACTTCTCCAACAAAAGTGATTAGCAAACCTTTATCTGATGATATTGATGCTAACAAAAACTCCAAGTTTAACACTATTGAAGTTGAGCAGCTTTCCTCTAAAGTGCATCGGAATGTGAAAACTTCTCGTTCATCCAGTTCTGTGAAGAAAGGCAAAGTTAGGAGTACTCCTCTAAACACAAACAAAATTCAGGTGGTAGCCAATAAATCTCATGTGCTACCTTTTAAACCAAAAAGATCAATCGAAGGATCAGTTGAAGAAAAGCTTAACGAGCTGTTGGATGTTGATGGAGGGATAAGTAAACGCAAAGATTCCACTAAAGGCTACTTAAAGCTGCTGTTCCTTACTGCACAATCAGGTGATAGTGGCAGTGGGGAAGCAATTAAAAGCAATCGAGATCTTTCTATTATTCTTGATGCGCTTTTGAAGACAAAGTCGCGTACGGTTTTGATTGATATTATTAACAAAAATGGGTTGAGAATGCTACACAACATTATGAAGATGTGCAGGAGAGACTTTAACAAGATTCCGATCCTCCGGAAGCTTTTGAAGGTCCTAGAATATTTGGCCGAAAAGCCGCAGATTCTTACACAGGAACATATTACTGGAGGTCCTCCCTGCCCGGGAATGGAGAGCTTTACGGAGTCGATACTATCACTGACGGAGCATGGTGACAAAAGGGTCCATGACATAGCACGCAACTTCCGAAATAGGTGGATTCCAAAAGCTTTCAGAAGACATAGTTTTGTAGACAGGGATGATGGAAAGATGGAATTTAACAGGAGTTCAAACTACAATAGGTTTTCCACAACACATGATAATTGGCGTGATCAAAGTGGAAGATCTACTGAAGTTGCAGATAATGTGAAGCAATCAGTGGTTAAAACACCAACTTCTGCGAGTACGGTTATCCAGGATGGCTCTTCTACACCTTCTACAGGTGGTTGTGCAACCAGTGAGACAAAGGTTCGCAAGCGTAAAAGCCGATGGGATCAGCCAGCAGTGGCAGTCCCTGATCCAAGTTCACTTCCAAACAAGGAACAGAAGATCGAGTCTAAACAGCTAGAATCTAGTCCATTACCTCGGATAGGTGATGTGACATCGCACCCTGAAAAGGGGAGCAGAGAGGGCGGAAATTGCACCAGCACTGTGCATGATTTATGTCAGCAAGTTGGTGCTGATGTGGTTAATGATGGAAAGCAAAACAATCCTGAGGATGTTCCTCCTGGATTTTCATCTTGCATTAATACCCCTGTGGTTCCGTCAACATCTTCAGTTATAGGGCATCCGCAGGCCAAGTTTGTTTCTCGCTTACCTGTCTCGTATGGTATTCCACTGTCTATCATGCAGCAATATGGGACACCCCATGCTGAAAGTGTTGATACTTGGGTTGTTGCTCCTGGCATGCCTTTCCATCCTTTTCCACCATTGCCCCCATGTCCCCGTCGTAAGAAAGACCCTTCTCATGATGGCAATCATTTGTCAGTTAACCAAGCTTCAGAAGGACAACAAGCCAGCTGCGTTGCTACGAATTGTCACTCTGAAGAGAGCAGTCCAAGCACAACTGGTGCTACTCAAGCGGACTTTGGCACACCATCTGCAAATAATCAATTGGGTACTAAACGACAGAGGGAGTCCTCATATGAGGCCCCCTTGGGGAGGAGATACTTCAAGCAGCAGAAGTGGAATCATCCAAAACCGAGGCTCCCATGGGTTAGGGATAGGAATGGTTGGGGATGTAATGGGAACAACTTCAGAGGTGGGACAAACAGCATAGGCGTAGGAACTGTAGGAAATGAGCTTAGAACTCCATATTGTTCAGAGGACATCAGCTATAGGGTGGAGAAAGCTGGCAATAATGTCAATCAGCATTCACATCACCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001763 GO:0002682 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006479 GO:0006629 GO:0006720 GO:0006721 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009553 GO:0009555 GO:0009653 GO:0009791 GO:0009893 GO:0009908 GO:0009909 GO:0009910 GO:0009987 GO:0010016 GO:0010223 GO:0010346 GO:0010363 GO:0010452 GO:0010468 GO:0010604 GO:0010638 GO:0010941 GO:0016043 GO:0016108 GO:0016116 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0022414 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0032259 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0034968 GO:0035670 GO:0036211 GO:0040029 GO:0042054 GO:0042800 GO:0043067 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045088 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048443 GO:0048466 GO:0048467 GO:0048481 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048581 GO:0048583 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050776 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051247 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090567 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1905269 GO:1905393 GO:2000026 GO:2000241 GO:2000242 GO:2001252
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

2109

Amino Acids

230.98

Weight (kDa)

5.75

Isoelectric Point (pI)

50.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CW PF07496 1047 - 1093 3.7e-11 CW-type Zinc Finger
AWS PF17907 1168 - 1203 1.9e-14 AWS domain
SET PF00856 1217 - 1323 1.1e-25 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3360
AarI CACCTGC 1 cut(s) 730
AasI GACNNNNNNGTC 1 cut(s) 5123
Acc36I ACCTGC 1 cut(s) 730
Acc65I GGTACC 1 cut(s) 56
AccB1I GGYRCC 2 cut(s) 56, 3344
AccB7I CCANNNNNTGG 3 cut(s) 494, 2770, 4121
AccI GTMKAC 5 cut(s) 603, 851, 2632, 3175, 5193
AccII CGCG 1 cut(s) 4882
AccIII TCCGGA 2 cut(s) 2560, 4980
AcoI YGGCCR 4 cut(s) 1699, 3499, 4155, 5010
AcvI CACGTG 1 cut(s) 2621
AdeI CACNNNGTG 1 cut(s) 2770
AflIII ACRYGT 3 cut(s) 168, 2422, 2618
AhlI ACTAGT 1 cut(s) 4352
AjiI CACGTC 1 cut(s) 169
AjnI CCWGG 9 cut(s) 487, 1564, 1847, 2226, 2374, 2683, 5355, 5668, 5842
AjuI GAANNNNNNNTTGG 2 cut(s) 98, 130
AloI GAACNNNNNNTCC 2 cut(s) 2541, 2573
Alw21I GWGCWC 3 cut(s) 516, 3147, 3218
Alw44I GTGCAC 1 cut(s) 3214
AlwNI CAGNNNCTG 2 cut(s) 2789, 5456
Ama87I CYCGRG 1 cut(s) 5065
Aor13HI TCCGGA 2 cut(s) 2560, 4980
AoxI GGCC 9 cut(s) 3, 1419, 1699, 2435, 3499, 4155, 5010, 5736, 6090
ApaLI GTGCAC 1 cut(s) 3214
ArsI GACNNNNNNTTYG 6 cut(s) 1939, 1971, 3233, 3265, 3953, 3985
AseI ATTAAT 2 cut(s) 3294, 5688
Asp700I GAANNNNTTC 3 cut(s) 742, 3552, 6194
Asp718I GGTACC 1 cut(s) 56
AspLEI GCGC 1 cut(s) 4864
AspS9I GGNCC 7 cut(s) 148, 1903, 3222, 4996, 5054, 5125, 6091
AsuC2I CCSGG 2 cut(s) 5066, 5067
AsuII TTCGAA 2 cut(s) 1103, 3634
AsuNHI GCTAGC 1 cut(s) 2591
AvaI CYCGRG 1 cut(s) 5065
AvaII GGWCC 6 cut(s) 148, 1903, 3222, 4996, 5054, 5125
AxyI CCTNAGG 1 cut(s) 5655
BaeGI GKGCMC 2 cut(s) 459, 3218
BaeI ACNNNNGTAYC 2 cut(s) 5817, 5850
BalI TGGCCA 2 cut(s) 3501, 4157
BanI GGYRCC 2 cut(s) 56, 3344
BanII GRGCYC 2 cut(s) 74, 837
BarI GAAGNNNNNNTAC 2 cut(s) 1510, 1542
BbrPI CACGTG 1 cut(s) 2621
BbsI GAAGAC 3 cut(s) 165, 4877, 5185
Bbv12I GWGCWC 3 cut(s) 516, 3147, 3218
BceAI ACGGC 2 cut(s) 871, 3360
BcgI CGANNNNNNTGC 2 cut(s) 3317, 3351
BciT130I CCWGG 9 cut(s) 489, 1566, 1849, 2228, 2376, 2685, 5357, 5670, 5844
BclI TGATCA 2 cut(s) 1315, 5272
BcnI CCSGG 2 cut(s) 5066, 5067
BcuI ACTAGT 1 cut(s) 4352
BfmI CTRYAG 9 cut(s) 214, 852, 1008, 2365, 3226, 4404, 5379, 6231, 6277
BfuAI ACCTGC 1 cut(s) 730
BglII AGATCT 4 cut(s) 78, 3577, 4840, 5285
BlpI GCTNAGC 1 cut(s) 123
BmcAI AGTACT 3 cut(s) 1465, 1585, 4609
Bme18I GGWCC 6 cut(s) 148, 1903, 3222, 4996, 5054, 5125
BmeT110I CYCGRG 1 cut(s) 5065
BmgBI CACGTC 1 cut(s) 169
BmgT120I GGNCC 7 cut(s) 148, 1903, 3222, 4996, 5054, 5125, 6091
BmrI ACTGGG 1 cut(s) 693
BmtI GCTAGC 1 cut(s) 2595
BmuI ACTGGG 1 cut(s) 693
BpiI GAAGAC 3 cut(s) 165, 4877, 5185
BplI GAGNNNNNCTC 2 cut(s) 4597, 4629
BpmI CTGGAG 2 cut(s) 1266, 5070
Bpu10I CCTNAGC 2 cut(s) 2818, 3034
Bpu1102I GCTNAGC 1 cut(s) 123
Bpu14I TTCGAA 2 cut(s) 1103, 3634
BpuEI CTTGAG 3 cut(s) 3255, 3689, 6003
BpuMI CCSGG 2 cut(s) 5066, 5067
BsaAI YACGTR 1 cut(s) 2621
BsaBI GATNNNNATC 4 cut(s) 345, 4973, 5677, 5916
BsaI GGTCTC 2 cut(s) 2364, 3662
BsaWI WCCGGW 2 cut(s) 2560, 4980
Bse21I CCTNAGG 1 cut(s) 5655
Bse3DI GCAATG 5 cut(s) 1274, 1679, 3478, 4153, 5870
Bse8I GATNNNNATC 4 cut(s) 345, 4973, 5677, 5916
BseAI TCCGGA 2 cut(s) 2560, 4980
BseBI CCWGG 9 cut(s) 489, 1566, 1849, 2228, 2376, 2685, 5357, 5670, 5844
BseJI GATNNNNATC 4 cut(s) 345, 4973, 5677, 5916
BseMI GCAATG 5 cut(s) 1274, 1679, 3478, 4153, 5870
BseRI GAGGAG 6 cut(s) 1149, 1898, 4211, 4289, 4602, 6118
BseSI GKGCMC 2 cut(s) 459, 3218
BseYI CCCAGC 2 cut(s) 951, 2587
BsgI GTGCAG 4 cut(s) 708, 2802, 4776, 4969
Bsh1236I CGCG 1 cut(s) 4882
BshFI GGCC 9 cut(s) 5, 1421, 1701, 2437, 3501, 4157, 5012, 5738, 6092
BshNI GGYRCC 2 cut(s) 56, 3344
BsiHKAI GWGCWC 3 cut(s) 516, 3147, 3218
BsiHKCI CYCGRG 1 cut(s) 5065
BsiSI CCGG 3 cut(s) 2561, 4981, 5066
BsiWI CGTACG 1 cut(s) 4883
BslFI GGGAC 6 cut(s) 727, 2735, 5438, 5815, 5868, 6220
BsmBI CGTCTC 1 cut(s) 2786
BsmFI GGGAC 6 cut(s) 727, 2735, 5438, 5815, 5868, 6220
BsmI GAATGC 8 cut(s) 744, 1753, 2802, 3139, 3377, 3540, 4929, 6313
BsnI GGCC 9 cut(s) 5, 1421, 1701, 2437, 3501, 4157, 5012, 5738, 6092
Bso31I GGTCTC 2 cut(s) 2364, 3662
BsoBI CYCGRG 1 cut(s) 5065
Bsp119I TTCGAA 2 cut(s) 1103, 3634
Bsp1286I GDGCHC 6 cut(s) 74, 459, 516, 837, 3147, 3218
Bsp13I TCCGGA 2 cut(s) 2560, 4980
Bsp1720I GCTNAGC 1 cut(s) 123
Bsp19I CCATGG 1 cut(s) 6152
BspANI GGCC 9 cut(s) 5, 1421, 1701, 2437, 3501, 4157, 5012, 5738, 6092
BspEI TCCGGA 2 cut(s) 2560, 4980
BspFNI CGCG 1 cut(s) 4882
BspHI TCATGA 2 cut(s) 1615, 5908
BspMAI CTGCAG 1 cut(s) 218
BspMI ACCTGC 1 cut(s) 730
BspOI GCTAGC 1 cut(s) 2595
BspQI GCTCTTC 2 cut(s) 567, 5371
BspT104I TTCGAA 2 cut(s) 1103, 3634
BspT107I GGYRCC 2 cut(s) 56, 3344
BspTNI GGTCTC 2 cut(s) 2364, 3662
BsrDI GCAATG 5 cut(s) 1274, 1679, 3478, 4153, 5870
BssNAI GTATAC 1 cut(s) 3176
BssT1I CCWWGG 8 cut(s) 591, 965, 993, 1733, 2880, 2936, 6096, 6152
Bst1107I GTATAC 1 cut(s) 3176
Bst2UI CCWGG 9 cut(s) 489, 1566, 1849, 2228, 2376, 2685, 5357, 5670, 5844
Bst6I CTCTTC 7 cut(s) 567, 1017, 1531, 1805, 3942, 5371, 5982
BstAPI GCANNNNNTGC 3 cut(s) 1685, 4297, 4300
BstBAI YACGTR 1 cut(s) 2621
BstBI TTCGAA 2 cut(s) 1103, 3634
BstDSI CCRYGG 3 cut(s) 2764, 4281, 6152
BstEII GGTNACC 1 cut(s) 483
BstENI CCTNNNNNAGG 5 cut(s) 477, 3021, 5379, 5529, 6100
BstFNI CGCG 1 cut(s) 4882
BstHHI GCGC 1 cut(s) 4864
BstNI CCWGG 9 cut(s) 489, 1566, 1849, 2228, 2376, 2685, 5357, 5670, 5844
BstNSI RCATGY 7 cut(s) 873, 928, 1266, 2426, 3731, 3822, 5851
BstPI GGTNACC 1 cut(s) 483
BstSFI CTRYAG 9 cut(s) 214, 852, 1008, 2365, 3226, 4404, 5379, 6231, 6277
BstSLI GKGCMC 2 cut(s) 459, 3218
BstUI CGCG 1 cut(s) 4882
BstV2I GAAGAC 3 cut(s) 165, 4877, 5185
BstX2I RGATCY 6 cut(s) 78, 3028, 3577, 4358, 4840, 5285
BstYI RGATCY 6 cut(s) 78, 3028, 3577, 4358, 4840, 5285
BstZ17I GTATAC 1 cut(s) 3176
Bsu36I CCTNAGG 1 cut(s) 5655
BsuRI GGCC 9 cut(s) 5, 1421, 1701, 2437, 3501, 4157, 5012, 5738, 6092
BtgI CCRYGG 3 cut(s) 2764, 4281, 6152
BtgZI GCGATG 2 cut(s) 1185, 5529
BtrI CACGTC 1 cut(s) 169
BtsI GCAGTG 4 cut(s) 223, 4158, 4819, 5451
BveI ACCTGC 1 cut(s) 730
CaiI CAGNNNCTG 2 cut(s) 2789, 5456
CciI TCATGA 2 cut(s) 1615, 5908
CfoI GCGC 1 cut(s) 4864
Cfr13I GGNCC 7 cut(s) 148, 1903, 3222, 4996, 5054, 5125, 6091
Cfr9I CCCGGG 1 cut(s) 5065
CspCI CAANNNNNGTGG 4 cut(s) 313, 348, 4351, 4386
DraI TTTAAA 2 cut(s) 1795, 4669
DraIII CACNNNGTG 1 cut(s) 2770
DrdI GACNNNNNNGTC 1 cut(s) 5123
DseDI GACNNNNNNGTC 1 cut(s) 5123
EaeI YGGCCR 4 cut(s) 1699, 3499, 4155, 5010
Eam1104I CTCTTC 7 cut(s) 567, 1017, 1531, 1805, 3942, 5371, 5982
EarI CTCTTC 7 cut(s) 567, 1017, 1531, 1805, 3942, 5371, 5982
EciI GGCGGA 2 cut(s) 179, 5589
Eco130I CCWWGG 8 cut(s) 591, 965, 993, 1733, 2880, 2936, 6096, 6152
Eco147I AGGCCT 1 cut(s) 1421
Eco24I GRGCYC 2 cut(s) 74, 837
Eco31I GGTCTC 2 cut(s) 2364, 3662
Eco32I GATATC 2 cut(s) 1074, 1552
Eco47I GGWCC 6 cut(s) 148, 1903, 3222, 4996, 5054, 5125
Eco72I CACGTG 1 cut(s) 2621
Eco81I CCTNAGG 1 cut(s) 5655
Eco88I CYCGRG 1 cut(s) 5065
Eco91I GGTNACC 1 cut(s) 483
EcoNI CCTNNNNNAGG 5 cut(s) 477, 3021, 5379, 5529, 6100
EcoO109I RGGNCCY 3 cut(s) 4996, 5054, 6091
EcoO65I GGTNACC 1 cut(s) 483
EcoRI GAATTC 2 cut(s) 1147, 1474
EcoRII CCWGG 9 cut(s) 487, 1564, 1847, 2226, 2374, 2683, 5355, 5668, 5842
EcoRV GATATC 2 cut(s) 1074, 1552
EcoT14I CCWWGG 8 cut(s) 591, 965, 993, 1733, 2880, 2936, 6096, 6152
EcoT22I ATGCAT 3 cut(s) 1264, 1753, 3820
EcoT38I GRGCYC 2 cut(s) 74, 837
ErhI CCWWGG 8 cut(s) 591, 965, 993, 1733, 2880, 2936, 6096, 6152
Esp3I CGTCTC 1 cut(s) 2786
FalI AAGNNNNNCTT 4 cut(s) 661, 693, 4692, 4724
FaqI GGGAC 6 cut(s) 727, 2735, 5438, 5815, 5868, 6220
FauI CCCGC 4 cut(s) 253, 380, 824, 2539
FauNDI CATATG 1 cut(s) 6085
FbaI TGATCA 2 cut(s) 1315, 5272
FblI GTMKAC 5 cut(s) 603, 851, 2632, 3175, 5193
FriOI GRGCYC 2 cut(s) 74, 837
GlaI GCGC 1 cut(s) 4863
GsaI CCCAGC 2 cut(s) 955, 2591
GsuI CTGGAG 2 cut(s) 1266, 5070
HaeIII GGCC 9 cut(s) 5, 1421, 1701, 2437, 3501, 4157, 5012, 5738, 6092
HapII CCGG 3 cut(s) 2561, 4981, 5066
HhaI GCGC 1 cut(s) 4864
Hin6I GCGC 1 cut(s) 4862
HinP1I GCGC 1 cut(s) 4862
HincII GTYRAC 4 cut(s) 1237, 3103, 5709, 5932
HindII GTYRAC 4 cut(s) 1237, 3103, 5709, 5932
HindIII AAGCTT 4 cut(s) 4706, 4985, 5169, 5937
HpaI GTTAAC 1 cut(s) 5932
HpaII CCGG 3 cut(s) 2561, 4981, 5066
Hpy99I CGWCG 2 cut(s) 3381, 5892
HpyCH4IV ACGT 4 cut(s) 168, 2620, 3090, 4192
HpySE526I ACGT 4 cut(s) 168, 2620, 3090, 4192
HspAI GCGC 1 cut(s) 4862
Kpn2I TCCGGA 2 cut(s) 2560, 4980
KpnI GGTACC 1 cut(s) 60
Ksp22I TGATCA 2 cut(s) 1315, 5272
KspAI GTTAAC 1 cut(s) 5932
LguI GCTCTTC 2 cut(s) 567, 5371
LmnI GCTCC 9 cut(s) 289, 1132, 1735, 3986, 4099, 5107, 5562, 5845, 6153
MaeII ACGT 4 cut(s) 168, 2620, 3090, 4192
MfeI CAATTG 2 cut(s) 2328, 6053
MflI RGATCY 6 cut(s) 78, 3028, 3577, 4358, 4840, 5285
MhlI GDGCHC 6 cut(s) 74, 459, 516, 837, 3147, 3218
MlsI TGGCCA 2 cut(s) 3501, 4157
MluNI TGGCCA 2 cut(s) 3501, 4157
MmeI TCCRAC 8 cut(s) 1742, 3285, 3688, 4213, 4339, 4357, 4475, 4701
Mox20I TGGCCA 2 cut(s) 3501, 4157
Mph1103I ATGCAT 3 cut(s) 1264, 1753, 3820
MroI TCCGGA 2 cut(s) 2560, 4980
MroXI GAANNNNTTC 3 cut(s) 742, 3552, 6194
MscI TGGCCA 2 cut(s) 3501, 4157
MslI CAYNNNNRTG 5 cut(s) 519, 1397, 3370, 3732, 4554
Msp20I TGGCCA 2 cut(s) 3501, 4157
MspA1I CMGCKG 6 cut(s) 505, 2093, 2285, 3182, 3992, 5961
MspI CCGG 3 cut(s) 2561, 4981, 5066
MunI CAATTG 2 cut(s) 2328, 6053
Mva1269I GAATGC 8 cut(s) 744, 1753, 2802, 3139, 3377, 3540, 4929, 6313
MvaI CCWGG 9 cut(s) 489, 1566, 1849, 2228, 2376, 2685, 5357, 5670, 5844
MvnI CGCG 1 cut(s) 4882
NciI CCSGG 2 cut(s) 5066, 5067
NcoI CCATGG 1 cut(s) 6152
NdeI CATATG 1 cut(s) 6085
NheI GCTAGC 1 cut(s) 2591
NmeAIII GCCGAG 1 cut(s) 2090
NsiI ATGCAT 3 cut(s) 1264, 1753, 3820
NspI RCATGY 7 cut(s) 873, 928, 1266, 2426, 3731, 3822, 5851
NspV TTCGAA 2 cut(s) 1103, 3634
PaeI GCATGC 3 cut(s) 873, 1266, 5851
PagI TCATGA 2 cut(s) 1615, 5908
PaqCI CACCTGC 1 cut(s) 730
PceI AGGCCT 1 cut(s) 1421
PciI ACATGT 1 cut(s) 2422
PciSI GCTCTTC 2 cut(s) 567, 5371
PcsI WCGNNNNNNNCGW 1 cut(s) 5146
PctI GAATGC 8 cut(s) 744, 1753, 2802, 3139, 3377, 3540, 4929, 6313
PdmI GAANNNNTTC 3 cut(s) 742, 3552, 6194
Pfl23II CGTACG 1 cut(s) 4883
PflFI GACNNNGTC 1 cut(s) 4876
PflMI CCANNNNNTGG 3 cut(s) 494, 2770, 4121
PfoI TCCNGGA 2 cut(s) 5355, 5668
PmaCI CACGTG 1 cut(s) 2621
PmlI CACGTG 1 cut(s) 2621
Ppu21I YACGTR 1 cut(s) 2621
PpuMI RGGWCCY 2 cut(s) 4996, 5054
PscI ACATGT 1 cut(s) 2422
PshBI ATTAAT 2 cut(s) 3294, 5688
PsiI TTATAA 1 cut(s) 3360
Psp5II RGGWCCY 2 cut(s) 4996, 5054
Psp6I CCWGG 9 cut(s) 487, 1564, 1847, 2226, 2374, 2683, 5355, 5668, 5842
PspCI CACGTG 1 cut(s) 2621
PspEI GGTNACC 1 cut(s) 483
PspFI CCCAGC 2 cut(s) 951, 2587
PspGI CCWGG 9 cut(s) 487, 1564, 1847, 2226, 2374, 2683, 5355, 5668, 5842
PspLI CGTACG 1 cut(s) 4883
PspPI GGNCC 7 cut(s) 148, 1903, 3222, 4996, 5054, 5125, 6091
PspPPI RGGWCCY 2 cut(s) 4996, 5054
PstI CTGCAG 1 cut(s) 218
PstNI CAGNNNCTG 2 cut(s) 2789, 5456
PsuI RGATCY 6 cut(s) 78, 3028, 3577, 4358, 4840, 5285
PsyI GACNNNGTC 1 cut(s) 4876
PvuII CAGCTG 5 cut(s) 505, 2093, 2285, 3182, 5961
RseI CAYNNNNRTG 5 cut(s) 519, 1397, 3370, 3732, 4554
SapI GCTCTTC 2 cut(s) 567, 5371
Sau96I GGNCC 7 cut(s) 148, 1903, 3222, 4996, 5054, 5125, 6091
ScaI AGTACT 3 cut(s) 1465, 1585, 4609
SduI GDGCHC 6 cut(s) 74, 459, 516, 837, 3147, 3218
SfcI CTRYAG 9 cut(s) 214, 852, 1008, 2365, 3226, 4404, 5379, 6231, 6277
SfuI TTCGAA 2 cut(s) 1103, 3634
SinI GGWCC 6 cut(s) 148, 1903, 3222, 4996, 5054, 5125
SmaI CCCGGG 1 cut(s) 5067
SmiMI CAYNNNNRTG 5 cut(s) 519, 1397, 3370, 3732, 4554
SmlI CTYRAG 3 cut(s) 3270, 3668, 6018
SmoI CTYRAG 3 cut(s) 3270, 3668, 6018
SpeI ACTAGT 1 cut(s) 4352
SphI GCATGC 3 cut(s) 873, 1266, 5851
SseBI AGGCCT 1 cut(s) 1421
SspI AATATT 2 cut(s) 1252, 5006
StuI AGGCCT 1 cut(s) 1421
StyI CCWWGG 8 cut(s) 591, 965, 993, 1733, 2880, 2936, 6096, 6152
TaiI ACGT 4 cut(s) 171, 2623, 3093, 4195
TatI WGTACW 3 cut(s) 1463, 1583, 4607
TauI GCSGC 3 cut(s) 1710, 3992, 5023
TspMI CCCGGG 1 cut(s) 5065
Tth111I GACNNNGTC 1 cut(s) 4876
Van91I CCANNNNNTGG 3 cut(s) 494, 2770, 4121
VneI GTGCAC 1 cut(s) 3214
VpaK11BI GGWCC 6 cut(s) 148, 1903, 3222, 4996, 5054, 5125
VspI ATTAAT 2 cut(s) 3294, 5688
XagI CCTNNNNNAGG 5 cut(s) 477, 3021, 5379, 5529, 6100
XceI RCATGY 7 cut(s) 873, 928, 1266, 2426, 3731, 3822, 5851
XcmI CCANNNNNNNNNTGG 1 cut(s) 3509
XmaI CCCGGG 1 cut(s) 5065
XmiI GTMKAC 5 cut(s) 603, 851, 2632, 3175, 5193
XmnI GAANNNNTTC 3 cut(s) 742, 3552, 6194
ZrmI AGTACT 3 cut(s) 1465, 1585, 4609
Zsp2I ATGCAT 3 cut(s) 1264, 1753, 3820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.