FvH4_2g28280

Aberrant root formation protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0006059
Physical Location & Seq
Reverse (-)
22243046 .. 22247259
4214 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g28280.t1

Sequence Viewer

Length: 1767 bp
ATGGCAGACCAACCGGAGCAATCCTCCCCCGTTCTTCAGCAGCTCCTACTCTCACTCTCCCAATCAGCCGATCAACCAGAGAGCTCAGTCTCGGACCTCATCGACTTCCTCGCTTCAATCTCCGCTCAGTCAGACCCGGACAATCAAAATTCAGAAGCCACCGCCTTCAAAACCCTCACTCAACTTCACCACTTCATCTCTTCTCAATCAGACCAGGCCATATTTGATCAGCTACAATTCGAGTTGCCCAAGGCGGTTTCGGAGTTTGGAGGAGTTTCGGAGAGGTGCCTGGAGGTGGTGGAGAGCATTATTGATCGGTTTATATCAATGTGTGGTGCCAGAGACATGCTTGCAGTTCTCGGCGAGGCATTGGATTCTCTTAATAAGAAAGGTGGGGATTATGGCTATGTTGTACCTCTTCTCTCAGGGTTTTCAAAAGTATTTCTCTCCCTTCAGAGGCGCCACTTTGAGCAAGTAAGACAAGCTACTCGTATTATTTTCAAAGTTTTGAAAGGCGTGTCTTCAGAATTGGAAGATGAAGCCGAATTACAAAAAATGTTTGATAGAGCTGTGGGAATTGCTGATTCCATACATGCAGTTTGCATGAAGTTGGAAGGCGGAGTACATGAAAAGCTTTCTGCTCTTCTTGGTCTTTATGTGCTAGAGATAGTGGCTCTTGTCAGCATGAATTTCGAAGCTTCAAGTTCACAGGCCTTTGTACTGCAGCTGTCTAGTTTCTTCCCGTATTGTGGTTTCTCATATCTAGGCTTAATTACGGGGTCTGATGTTGACAAAATAAGTAGGATTGTAATAGGAGACGATAAAGATCTCTATGTTGATTCTTTCGTGGACGTCAAATGTGGTGCATCTGTTTCAGTGATTTGGGGCCATGCTTCTAATGAGGTTGCCACGGCTGCTCATGAGGATTTGACTGCTGTCAAAAATGAACTTCAGAATAATCAGACTAAAAGGTGGCAAGCTTTTGGCATGCTGAAGCACATACTAGCTTCTGTCACTCTGCCATGGGAACTCAAAAAACATGCAATCGATTTCTTGCATAGCATCAGAGGTGGAAATATTTCCCCTTGTGACGAACATAGTGACTTCTCAGCCGACATGCCAGGCCTTTTTGCTGCTCTGCAGGCTATTCAAATGGTCATCATGTATACAGCGGACACAGAGTTGAGGAAAAATGCCTTTGATGCATTTAAGTGGATTCTGGCTGATATTCCAACTTGTCATAGGTTCGACATCCTAAAGGCTTTGATCACAAAAAGTGATTCTTCCTCTATGATTGCAATCCTTTTTGATATCGTTAAAGGAGAAATGCACAAGGAAAGTTGTGAAAAAATGGGAAATGGTCGAGCTTTGAGAGAAGAACATAATGCACATCCCCGTTCATCGTTGTGGACTGCCAGTATCCTGGAATTGGTGGAGTTTATTCTAAGGCCCCCAAAGGGAGGACCTCCATCCTTTCCTGAGCAGACTGATTCGGTCCTGTCTGCACTCAACTTGTACCGATATGTACTGATAGCAGAATCAAGAGGAAAGACCAACTATACCGGAGTACTTTCCAGAAGCAATTTACAGAAAGCCTATAATGAATGGCTTCTACCTCTACGAACCCTAGTTACAGTCATAGTGGCCAAGAACAAGAATGAAAGTGATGAGCTTACAGTTGACACTCTTTGTACTTTTAACCCAGTTGAATTAGTTTTGTACCGCTGTATAGAGCTTGTTGAAGAAAAGTTGAAAGAGTCTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinetochor_Ybp2

Protein Analysis

589

Amino Acids

65.24

Weight (kDa)

5.13

Isoelectric Point (pI)

45.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinetochor_Ybp2 PF08568 375 - 555 6.6e-17 Uncharacterised protein family, YAP/Alf4/glomulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 855
AccB1I GGYRCC 3 cut(s) 285, 335, 459
AccBSI CCGCTC 1 cut(s) 125
AccI GTMKAC 2 cut(s) 1166, 1760
AciI CCGC 6 cut(s) 123, 162, 254, 618, 1172, 1723
AcoI YGGCCR 1 cut(s) 1644
AcsI RAATTY 2 cut(s) 148, 688
AcuI CTGAAG 5 cut(s) 20, 437, 507, 935, 1013
AcyI GRCGYC 2 cut(s) 460, 852
AfaI GTAC 8 cut(s) 414, 624, 720, 1517, 1527, 1569, 1693, 1721
AfiI CCNNNNNNNGG 6 cut(s) 295, 456, 749, 1429, 1457, 1460
AjnI CCWGG 4 cut(s) 213, 288, 1120, 1422
Alw21I GWGCWC 1 cut(s) 86
Alw26I GTCTC 3 cut(s) 94, 336, 810
AoxI GGCC 6 cut(s) 216, 711, 886, 1123, 1448, 1644
ApeKI GCWGC 4 cut(s) 40, 724, 914, 1133
ApoI RAATTY 2 cut(s) 148, 688
Asp700I GAANNNNTTC 2 cut(s) 1078, 1608
AspLEI GCGC 1 cut(s) 462
AspS9I GGNCC 5 cut(s) 94, 886, 1449, 1463, 1495
AsuC2I CCSGG 1 cut(s) 137
AsuHPI GGTGA 1 cut(s) 179
AsuII TTCGAA 1 cut(s) 693
AvaII GGWCC 3 cut(s) 94, 1463, 1495
BalI TGGCCA 1 cut(s) 1646
BanI GGYRCC 3 cut(s) 285, 335, 459
BanII GRGCYC 1 cut(s) 86
BarI GAAGNNNNNNTAC 4 cut(s) 531, 563, 606, 638
BbsI GAAGAC 1 cut(s) 513
Bbv12I GWGCWC 1 cut(s) 86
BbvI GCAGC 4 cut(s) 52, 736, 901, 1120
BccI CCATC 1 cut(s) 1477
BceAI ACGGC 1 cut(s) 927
BcgI CGANNNNNNTGC 2 cut(s) 673, 707
BciT130I CCWGG 4 cut(s) 215, 290, 1122, 1424
BciVI GTATCC 1 cut(s) 1430
BclI TGATCA 2 cut(s) 226, 1266
BcnI CCSGG 1 cut(s) 137
BcoDI GTCTC 3 cut(s) 94, 336, 810
BfaI CTAG 5 cut(s) 662, 732, 764, 1004, 1628
BfmI CTRYAG 2 cut(s) 722, 1139
BfoI RGCGCY 1 cut(s) 463
BfuI GTATCC 1 cut(s) 1430
BglII AGATCT 1 cut(s) 826
BisI GCNGC 4 cut(s) 41, 725, 915, 1134
BlsI GCNGC 4 cut(s) 42, 726, 916, 1135
BmcAI AGTACT 1 cut(s) 1569
Bme1390I CCNGG 5 cut(s) 137, 215, 290, 1122, 1424
Bme18I GGWCC 3 cut(s) 94, 1463, 1495
BmgT120I GGNCC 5 cut(s) 94, 886, 1449, 1463, 1495
BmiI GGNNCC 5 cut(s) 287, 337, 461, 887, 1451
BmrFI CCNGG 5 cut(s) 137, 215, 290, 1122, 1424
BmrI ACTGGG 1 cut(s) 1697
BmsI GCATC 3 cut(s) 875, 1071, 1192
BmuI ACTGGG 1 cut(s) 1697
BoxI GACNNNNGTC 1 cut(s) 935
BpiI GAAGAC 1 cut(s) 513
BplI GAGNNNNNCTC 2 cut(s) 8, 40
BpmI CTGGAG 1 cut(s) 311
Bpu10I CCTNAGC 1 cut(s) 1479
Bpu14I TTCGAA 1 cut(s) 693
BpuMI CCSGG 1 cut(s) 137
Bsa29I ATCGAT 1 cut(s) 1047
BsaBI GATNNNNATC 2 cut(s) 825, 1298
BsaHI GRCGYC 2 cut(s) 460, 852
BsaJI CCNNGG 3 cut(s) 249, 909, 1022
BsaWI WCCGGW 2 cut(s) 13, 1562
Bsc4I CCNNNNNNNGG 6 cut(s) 295, 456, 749, 1429, 1457, 1460
Bse1I ACTGG 2 cut(s) 1416, 1703
Bse8I GATNNNNATC 2 cut(s) 825, 1298
BseBI CCWGG 4 cut(s) 215, 290, 1122, 1424
BseCI ATCGAT 1 cut(s) 1047
BseDI CCNNGG 3 cut(s) 249, 909, 1022
BseGI GGATG 3 cut(s) 1251, 1390, 1469
BseJI GATNNNNATC 2 cut(s) 825, 1298
BseLI CCNNNNNNNGG 6 cut(s) 295, 456, 749, 1429, 1457, 1460
BseMII CTCAG 5 cut(s) 99, 140, 438, 1122, 1470
BseNI ACTGG 2 cut(s) 1416, 1703
BseRI GAGGAG 1 cut(s) 285
BseXI GCAGC 4 cut(s) 52, 736, 901, 1120
BsgI GTGCAG 1 cut(s) 1488
BshFI GGCC 6 cut(s) 218, 713, 888, 1125, 1450, 1646
BshNI GGYRCC 3 cut(s) 285, 335, 459
BshVI ATCGAT 1 cut(s) 1047
BsiHKAI GWGCWC 1 cut(s) 86
BsiSI CCGG 3 cut(s) 14, 137, 1563
BslI CCNNNNNNNGG 6 cut(s) 295, 456, 749, 1429, 1457, 1460
BsmAI GTCTC 3 cut(s) 94, 336, 810
BsmBI CGTCTC 1 cut(s) 810
BsnI GGCC 6 cut(s) 218, 713, 888, 1125, 1450, 1646
Bsp119I TTCGAA 1 cut(s) 693
Bsp1286I GDGCHC 1 cut(s) 86
Bsp143I GATC 5 cut(s) 70, 226, 313, 826, 1266
Bsp19I CCATGG 1 cut(s) 1022
BspACI CCGC 6 cut(s) 123, 162, 254, 618, 1172, 1723
BspANI GGCC 6 cut(s) 218, 713, 888, 1125, 1450, 1646
BspCNI CTCAG 5 cut(s) 98, 139, 437, 1121, 1471
BspDI ATCGAT 1 cut(s) 1047
BspHI TCATGA 1 cut(s) 919
BspLI GGNNCC 5 cut(s) 287, 337, 461, 887, 1451
BspMAI CTGCAG 2 cut(s) 726, 1143
BspQI GCTCTTC 1 cut(s) 648
BspT104I TTCGAA 1 cut(s) 693
BspT107I GGYRCC 3 cut(s) 285, 335, 459
BsrBI CCGCTC 1 cut(s) 125
BsrI ACTGG 2 cut(s) 1416, 1703
BssECI CCNNGG 3 cut(s) 249, 909, 1022
BssMI GATC 5 cut(s) 70, 226, 313, 826, 1266
BssNAI GTATAC 1 cut(s) 1167
BssNI GRCGYC 2 cut(s) 460, 852
BssT1I CCWWGG 2 cut(s) 249, 1022
Bst1107I GTATAC 1 cut(s) 1167
Bst2UI CCWGG 4 cut(s) 215, 290, 1122, 1424
Bst4CI ACNGT 2 cut(s) 1636, 1678
Bst6I CTCTTC 3 cut(s) 205, 423, 648
BstACI GRCGYC 2 cut(s) 460, 852
BstBI TTCGAA 1 cut(s) 693
BstC8I GCNNGC 4 cut(s) 351, 978, 989, 1143
BstDEI CTNAG 6 cut(s) 85, 126, 424, 1108, 1445, 1479
BstDSI CCRYGG 2 cut(s) 909, 1022
BstF5I GGATG 3 cut(s) 1251, 1390, 1469
BstH2I RGCGCY 1 cut(s) 463
BstHHI GCGC 1 cut(s) 462
BstKTI GATC 5 cut(s) 73, 229, 316, 829, 1269
BstMAI GTCTC 3 cut(s) 94, 336, 810
BstMBI GATC 5 cut(s) 70, 226, 313, 826, 1266
BstMWI GCNNNNNNNGC 3 cut(s) 914, 1142, 1202
BstNI CCWGG 4 cut(s) 215, 290, 1122, 1424
BstNSI RCATGY 5 cut(s) 349, 596, 991, 1043, 1120
BstPAI GACNNNNGTC 1 cut(s) 935
BstSCI CCNGG 5 cut(s) 135, 213, 288, 1120, 1422
BstSFI CTRYAG 2 cut(s) 722, 1139
BstV1I GCAGC 4 cut(s) 52, 736, 901, 1120
BstV2I GAAGAC 1 cut(s) 513
BstX2I RGATCY 1 cut(s) 826
BstXI CCANNNNNNTGG 1 cut(s) 1423
BstYI RGATCY 1 cut(s) 826
BstZ17I GTATAC 1 cut(s) 1167
Bsu15I ATCGAT 1 cut(s) 1047
BsuI GTATCC 1 cut(s) 1430
BsuRI GGCC 6 cut(s) 218, 713, 888, 1125, 1450, 1646
BsuTUI ATCGAT 1 cut(s) 1047
BtgI CCRYGG 2 cut(s) 909, 1022
BtsCI GGATG 3 cut(s) 1251, 1390, 1469
BtsIMutI CAGTG 1 cut(s) 882
Cac8I GCNNGC 4 cut(s) 351, 978, 989, 1143
CciI TCATGA 1 cut(s) 919
CfoI GCGC 1 cut(s) 462
Cfr13I GGNCC 5 cut(s) 94, 886, 1449, 1463, 1495
ClaI ATCGAT 1 cut(s) 1047
Csp6I GTAC 8 cut(s) 413, 623, 719, 1516, 1526, 1568, 1692, 1720
CviQI GTAC 8 cut(s) 413, 623, 719, 1516, 1526, 1568, 1692, 1720
DdeI CTNAG 6 cut(s) 85, 126, 424, 1108, 1445, 1479
DinI GGCGCC 1 cut(s) 461
DpnI GATC 5 cut(s) 72, 228, 315, 828, 1268
DpnII GATC 5 cut(s) 70, 226, 313, 826, 1266
EaeI YGGCCR 1 cut(s) 1644
Eam1104I CTCTTC 3 cut(s) 205, 423, 648
EarI CTCTTC 3 cut(s) 205, 423, 648
EciI GGCGGA 1 cut(s) 633
Ecl136II GAGCTC 1 cut(s) 84
Eco130I CCWWGG 2 cut(s) 249, 1022
Eco147I AGGCCT 2 cut(s) 713, 1125
Eco24I GRGCYC 1 cut(s) 86
Eco32I GATATC 1 cut(s) 1312
Eco47I GGWCC 3 cut(s) 94, 1463, 1495
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 5 cut(s) 20, 437, 507, 935, 1013
EcoICRI GAGCTC 1 cut(s) 84
EcoO109I RGGNCCY 2 cut(s) 1449, 1463
EcoRII CCWGG 4 cut(s) 213, 288, 1120, 1422
EcoRV GATATC 1 cut(s) 1312
EcoT14I CCWWGG 2 cut(s) 249, 1022
EcoT22I ATGCAT 1 cut(s) 1207
EcoT38I GRGCYC 1 cut(s) 86
EgeI GGCGCC 1 cut(s) 461
EheI GGCGCC 1 cut(s) 461
ErhI CCWWGG 2 cut(s) 249, 1022
Esp3I CGTCTC 1 cut(s) 810
FalI AAGNNNNNCTT 2 cut(s) 1267, 1299
FbaI TGATCA 2 cut(s) 226, 1266
FblI GTMKAC 2 cut(s) 1166, 1760
Fnu4HI GCNGC 4 cut(s) 41, 725, 915, 1134
FokI GGATG 3 cut(s) 1238, 1377, 1456
FriOI GRGCYC 1 cut(s) 86
Fsp4HI GCNGC 4 cut(s) 41, 725, 915, 1134
FspBI CTAG 5 cut(s) 662, 732, 764, 1004, 1628
GlaI GCGC 1 cut(s) 461
GluI GCNGC 4 cut(s) 41, 725, 915, 1134
GsuI CTGGAG 1 cut(s) 311
HaeII RGCGCY 1 cut(s) 463
HaeIII GGCC 6 cut(s) 218, 713, 888, 1125, 1450, 1646
HapII CCGG 3 cut(s) 14, 137, 1563
HhaI GCGC 1 cut(s) 462
Hin1I GRCGYC 2 cut(s) 460, 852
Hin6I GCGC 1 cut(s) 460
HinP1I GCGC 1 cut(s) 460
HincII GTYRAC 2 cut(s) 790, 1681
HindII GTYRAC 2 cut(s) 790, 1681
HindIII AAGCTT 3 cut(s) 632, 696, 978
HinfI GANTC 8 cut(s) 374, 584, 839, 1216, 1280, 1490, 1538, 1757
HpaII CCGG 3 cut(s) 14, 137, 1563
HphI GGTGA 1 cut(s) 179
Hpy166II GTNNAC 7 cut(s) 707, 790, 850, 1167, 1410, 1681, 1761
Hpy188III TCNNGA 4 cut(s) 920, 1478, 1542, 1575
Hpy8I GTNNAC 7 cut(s) 707, 790, 850, 1167, 1410, 1681, 1761
HpyAV CCTTC 3 cut(s) 175, 461, 608
HpyCH4III ACNGT 2 cut(s) 1636, 1678
HpyCH4IV ACGT 1 cut(s) 852
HpyF10VI GCNNNNNNNGC 3 cut(s) 914, 1142, 1202
HpyF3I CTNAG 6 cut(s) 85, 126, 424, 1108, 1445, 1479
HpySE526I ACGT 1 cut(s) 852
Hsp92I GRCGYC 2 cut(s) 460, 852
HspAI GCGC 1 cut(s) 460
KasI GGCGCC 1 cut(s) 459
Ksp22I TGATCA 2 cut(s) 226, 1266
Kzo9I GATC 5 cut(s) 70, 226, 313, 826, 1266
LguI GCTCTTC 1 cut(s) 648
LmnI GCTCC 2 cut(s) 16, 48
Lsp1109I GCAGC 4 cut(s) 52, 736, 901, 1120
LweI GCATC 3 cut(s) 875, 1071, 1192
MaeI CTAG 5 cut(s) 662, 732, 764, 1004, 1628
MaeII ACGT 1 cut(s) 852
MaeIII GTNAC 4 cut(s) 1012, 1088, 1100, 1630
MalI GATC 5 cut(s) 72, 228, 315, 828, 1268
MbiI CCGCTC 1 cut(s) 125
MboI GATC 5 cut(s) 70, 226, 313, 826, 1266
MflI RGATCY 1 cut(s) 826
MhlI GDGCHC 1 cut(s) 86
MlsI TGGCCA 1 cut(s) 1646
MluNI TGGCCA 1 cut(s) 1646
Mly113I GGCGCC 1 cut(s) 460
MlyI GAGTC 1 cut(s) 1766
MmeI TCCRAC 2 cut(s) 591, 1256
Mox20I TGGCCA 1 cut(s) 1646
Mph1103I ATGCAT 1 cut(s) 1207
MroXI GAANNNNTTC 2 cut(s) 1078, 1608
MscI TGGCCA 1 cut(s) 1646
MseI TTAA 5 cut(s) 381, 770, 1209, 1317, 1698
MslI CAYNNNNRTG 2 cut(s) 1210, 1405
Msp20I TGGCCA 1 cut(s) 1646
MspA1I CMGCKG 3 cut(s) 727, 1172, 1725
MspI CCGG 3 cut(s) 14, 137, 1563
MspR9I CCNGG 5 cut(s) 137, 215, 290, 1122, 1424
MvaI CCWGG 4 cut(s) 215, 290, 1122, 1424
MwoI GCNNNNNNNGC 3 cut(s) 914, 1142, 1202
NarI GGCGCC 1 cut(s) 460
NciI CCSGG 1 cut(s) 137
NcoI CCATGG 1 cut(s) 1022
NdeII GATC 5 cut(s) 70, 226, 313, 826, 1266
NlaIV GGNNCC 5 cut(s) 287, 337, 461, 887, 1451
NmeAIII GCCGAG 1 cut(s) 339
NmuCI GTSAC 3 cut(s) 1012, 1088, 1100
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 5 cut(s) 349, 596, 991, 1043, 1120
NspV TTCGAA 1 cut(s) 693
PaeI GCATGC 1 cut(s) 991
PagI TCATGA 1 cut(s) 919
PceI AGGCCT 2 cut(s) 713, 1125
PciSI GCTCTTC 1 cut(s) 648
PdmI GAANNNNTTC 2 cut(s) 1078, 1608
PfeI GAWTC 7 cut(s) 374, 584, 839, 1216, 1280, 1490, 1538
PfoI TCCNGGA 1 cut(s) 1422
PkrI GCNGC 4 cut(s) 42, 726, 916, 1135
PleI GAGTC 1 cut(s) 1765
PluTI GGCGCC 1 cut(s) 463
PpsI GAGTC 1 cut(s) 1765
PpuMI RGGWCCY 1 cut(s) 1463
PshAI GACNNNNGTC 1 cut(s) 935
Psp124BI GAGCTC 1 cut(s) 86
Psp5II RGGWCCY 1 cut(s) 1463
Psp6I CCWGG 4 cut(s) 213, 288, 1120, 1422
PspGI CCWGG 4 cut(s) 213, 288, 1120, 1422
PspN4I GGNNCC 5 cut(s) 287, 337, 461, 887, 1451
PspPI GGNCC 5 cut(s) 94, 886, 1449, 1463, 1495
PspPPI RGGWCCY 1 cut(s) 1463
PsrI GAACNNNNNNTAC 2 cut(s) 1615, 1647
PstI CTGCAG 2 cut(s) 726, 1143
PsuI RGATCY 1 cut(s) 826
PvuII CAGCTG 1 cut(s) 727
RsaI GTAC 8 cut(s) 414, 624, 720, 1517, 1527, 1569, 1693, 1721
RsaNI GTAC 8 cut(s) 413, 623, 719, 1516, 1526, 1568, 1692, 1720
RseI CAYNNNNRTG 2 cut(s) 1210, 1405
SacI GAGCTC 1 cut(s) 86
SapI GCTCTTC 1 cut(s) 648
SaqAI TTAA 5 cut(s) 381, 770, 1209, 1317, 1698
SatI GCNGC 4 cut(s) 41, 725, 915, 1134
Sau3AI GATC 5 cut(s) 70, 226, 313, 826, 1266
Sau96I GGNCC 5 cut(s) 94, 886, 1449, 1463, 1495
ScaI AGTACT 1 cut(s) 1569
SchI GAGTC 1 cut(s) 1766
ScrFI CCNGG 5 cut(s) 137, 215, 290, 1122, 1424
SduI GDGCHC 1 cut(s) 86
SfaNI GCATC 3 cut(s) 875, 1071, 1192
SfcI CTRYAG 2 cut(s) 722, 1139
SfoI GGCGCC 1 cut(s) 461
SfuI TTCGAA 1 cut(s) 693
SinI GGWCC 3 cut(s) 94, 1463, 1495
SmiMI CAYNNNNRTG 2 cut(s) 1210, 1405
SphI GCATGC 1 cut(s) 991
SseBI AGGCCT 2 cut(s) 713, 1125
SsiI CCGC 6 cut(s) 123, 162, 254, 618, 1172, 1723
SspDI GGCGCC 1 cut(s) 459
SspI AATATT 1 cut(s) 1078
SspMI CTAG 5 cut(s) 662, 732, 764, 1004, 1628
SstI GAGCTC 1 cut(s) 86
StuI AGGCCT 2 cut(s) 713, 1125
StyD4I CCNGG 5 cut(s) 135, 213, 288, 1120, 1422
StyI CCWWGG 2 cut(s) 249, 1022
TaaI ACNGT 2 cut(s) 1636, 1678
TaiI ACGT 1 cut(s) 855
TaqI TCGA 6 cut(s) 102, 240, 693, 1047, 1248, 1363
TaqII GACCGA 1 cut(s) 1483
TatI WGTACW 5 cut(s) 622, 718, 1525, 1567, 1691
TfiI GAWTC 7 cut(s) 374, 584, 839, 1216, 1280, 1490, 1538
Tru1I TTAA 5 cut(s) 381, 770, 1209, 1317, 1698
Tru9I TTAA 5 cut(s) 381, 770, 1209, 1317, 1698
TscAI CASTG 1 cut(s) 882
TseFI GTSAC 3 cut(s) 1012, 1088, 1100
TseI GCWGC 4 cut(s) 40, 724, 914, 1133
Tsp45I GTSAC 3 cut(s) 1012, 1088, 1100
TspDTI ATGAA 9 cut(s) 184, 552, 620, 642, 701, 960, 1389, 1617, 1674
TspRI CASTG 1 cut(s) 882
VpaK11BI GGWCC 3 cut(s) 94, 1463, 1495
XapI RAATTY 2 cut(s) 148, 688
XceI RCATGY 5 cut(s) 349, 596, 991, 1043, 1120
XmiI GTMKAC 2 cut(s) 1166, 1760
XmnI GAANNNNTTC 2 cut(s) 1078, 1608
XspI CTAG 5 cut(s) 662, 732, 764, 1004, 1628
ZraI GACGTC 1 cut(s) 853
ZrmI AGTACT 1 cut(s) 1569
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.