Rroxscaffold_7G00170800

Aberrant root formation protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0006059
Physical Location & Seq
Forward (+)
11153173 .. 11157400
4228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00170800.1

Sequence Viewer

Length: 1758 bp
ATGGCGGACGAACCGGACCAGTCCTCTGCTGTTCTTCAACAGATCCTAACCTCACTCTCCCAATCAGCTGATCAACCACAAAGCTCGGTCTCGGAGCTCATCGACTTCCTCAATTCAACCTCCGCTCAATCAGTCCCGGACAACGAAGATTCAGAAGCCACCGCCTTCCGAACCCTCACGCAAGTTCACCAATTCATCTCTTCTCAGTCAGACCAGGCAATCTTTGATCAGCTCTTGTTTGAGTTGCCGAAGGCCGTTTCGGAGTTGGGAGGTGTTTCGGAGAGGTGCCTGGAGGTGTTCGAGAGCATTATTGATCGGTTTGTATCAATGTGTGGTGCCAGAGACATGCTTTCAGTTCTTGGCGAAGCATTGGCTTACCTAACTATGAAAGGCGGGGATTATGGCTATGTTGTGCCTCTTTTCTCGGTGTTTTCTATAGTATTTCCTTGCCTTAAGAGGCGTCACTTTGAGCAAGTAAAAGAAGCTACTGGAATTATCCTCAAAGTTTTGAAGACCGTGTCTTTGGAGTTGGAAGATGAAGCAGAATTACAAAAAATGTTTGATAGAGCTGTGGGCATTGCTAATTCCATACATGCAGTTTGCTTGAAGTTGGAAGGAGGAGTATATGAAAAGATTTGTGCTCTTCTTGGTCTTTATGTCTTAGAAATTATGGCTCTTGTCAGCATGAATTTCGAAGTTTTAAGTTCGCAGCCCTTTGTGCTGCAACTGTCTAGTTTCTTCCCGTTTTGTGGTTTGTCATATCTCGGCTTAATTACTGGGTCTGGTGTTGACAAAATAAGTAGGATTGTAATAGGAGACAATGAAGATTTACATGTTGATTGTTTCTCCGACGTCAGATGTGGTGCATCTGTTTCAGTGATTTGGGGCCATGCTTCTAATGAGGTTGCTACGGCTGCTGATGAGGATTTGACTGCTGTCAAGGTTGAACTTCAGAATAATCAGACTAAAAGGTGGCAAGCTTTTGGCATGCTAAAGCACATTCTAGCTTCTGTCAATCTGCCATGGGAACTTAAAAAACATGCAATTGATTTTCTGCTTAGCATCAGAGGTGGAAATATTTCCCCTTGTGACGAACATAGTGACTTTTCATCTGACATGGCGGGCCTTTTTGCTCTTCTGCAGGCTGTTCAAATGGTCATCATGTATACATCAGTCACAGAGCTGAGGAAGAATGCCTTTGATGCATTTAAATGGATTCTGGCTGATATTCCAACTTCTCATAGGTTCGACATTCTAAAGGCTTTAATCACAAAAAGTGATTCTTCATCTATGATTGCGATCCTTTTAGATACTGTTAAAGGAGAGATGCACAAGGAAAGAATGGGAAATGATGAAGCTTTGCAAGAAGAAAATAATACACATCCCCGTTCATTGTTGTGGACTGCCAGCATCCTGGAATTGGTGGAGTCGATTCTAAGGCCCCCGAAGGGAGGACCTCCATCCTTTCCTGAGCATACTGATTCGGTCTTGGCTGCACTCAACTTGTACCGATATGTATTGATAGCAGAATCAAGAGGAAAGACCAACTATACCGGAGTAGTTTCCAGAAGCAATTTACAGAAAGCCTATAATGAATGGCTTCTACCTCTGCGAACCCTAGTTACAGGCATAGTGGCAAAGAACAAGAATGAAAATGATGAGCTTGCGGTTGACACTCTGTGCACTTTTAACCCAGTTGAATTAGTTTTGTACCGCTGTATAGAGCTTGTTGAAGAAAAGCTGAAAGAGTCTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinetochor_Ybp2

Protein Analysis

585

Amino Acids

64.77

Weight (kDa)

4.86

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinetochor_Ybp2 PF08568 374 - 553 7.7e-20 Uncharacterised protein family, YAP/Alf4/glomulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 855
AccB1I GGYRCC 2 cut(s) 285, 335
AccBSI CCGCTC 1 cut(s) 125
AccI GTMKAC 2 cut(s) 1166, 1751
AciI CCGC 7 cut(s) 5, 123, 162, 393, 1121, 1667, 1714
AclWI GGATC 2 cut(s) 37, 1294
AcsI RAATTY 1 cut(s) 688
AcuI CTGAAG 1 cut(s) 935
AcyI GRCGYC 2 cut(s) 460, 852
AdeI CACNNNGTG 1 cut(s) 1680
AfaI GTAC 2 cut(s) 1508, 1712
AfiI CCNNNNNNNGG 4 cut(s) 749, 1420, 1448, 1451
AflII CTTAAG 1 cut(s) 452
AflIII ACRYGT 1 cut(s) 832
AgsI TTSAA 8 cut(s) 38, 117, 511, 607, 947, 1151, 1700, 1733
AjnI CCWGG 3 cut(s) 213, 288, 1413
Alw21I GWGCWC 3 cut(s) 99, 643, 1685
Alw26I GTCTC 3 cut(s) 94, 336, 810
Alw44I GTGCAC 1 cut(s) 1681
AlwI GGATC 2 cut(s) 37, 1294
AoxI GGCC 4 cut(s) 252, 886, 1123, 1439
ApaLI GTGCAC 1 cut(s) 1681
ApeKI GCWGC 4 cut(s) 709, 721, 914, 1493
ApoI RAATTY 1 cut(s) 688
ArsI GACNNNNNNTTYG 2 cut(s) 505, 537
Asp700I GAANNNNTTC 2 cut(s) 1078, 1599
AspS9I GGNCC 5 cut(s) 16, 886, 1123, 1440, 1454
AsuC2I CCSGG 1 cut(s) 137
AsuHPI GGTGA 1 cut(s) 179
AsuII TTCGAA 1 cut(s) 693
AvaII GGWCC 2 cut(s) 16, 1454
BaeGI GKGCMC 1 cut(s) 1685
BanI GGYRCC 2 cut(s) 285, 335
BanII GRGCYC 1 cut(s) 99
BarI GAAGNNNNNNTAC 2 cut(s) 531, 563
BbsI GAAGAC 1 cut(s) 518
Bbv12I GWGCWC 3 cut(s) 99, 643, 1685
BbvCI CCTCAGC 1 cut(s) 1184
BbvI GCAGC 4 cut(s) 708, 721, 901, 1480
BccI CCATC 1 cut(s) 1468
BceAI ACGGC 2 cut(s) 239, 927
BcgI CGANNNNNNTGC 2 cut(s) 673, 707
BciT130I CCWGG 3 cut(s) 215, 290, 1415
BclI TGATCA 2 cut(s) 70, 226
BcnI CCSGG 1 cut(s) 137
BcoDI GTCTC 3 cut(s) 94, 336, 810
BfaI CTAG 3 cut(s) 732, 1004, 1619
BfmI CTRYAG 2 cut(s) 435, 1139
BfrI CTTAAG 1 cut(s) 452
BisI GCNGC 4 cut(s) 710, 722, 915, 1494
BlpI GCTNAGC 1 cut(s) 1058
BlsI GCNGC 4 cut(s) 711, 723, 916, 1495
Bme1390I CCNGG 4 cut(s) 137, 215, 290, 1415
Bme18I GGWCC 2 cut(s) 16, 1454
BmgT120I GGNCC 5 cut(s) 16, 886, 1123, 1440, 1454
BmiI GGNNCC 4 cut(s) 287, 337, 887, 1442
BmrFI CCNGG 4 cut(s) 137, 215, 290, 1415
BmrI ACTGGG 2 cut(s) 786, 1688
BmsI GCATC 5 cut(s) 875, 1071, 1192, 1317, 1419
BmuI ACTGGG 2 cut(s) 786, 1688
BoxI GACNNNNGTC 1 cut(s) 935
BpiI GAAGAC 1 cut(s) 518
BpmI CTGGAG 1 cut(s) 311
Bpu10I CCTNAGC 2 cut(s) 1184, 1470
Bpu1102I GCTNAGC 1 cut(s) 1058
Bpu14I TTCGAA 1 cut(s) 693
BpuMI CCSGG 1 cut(s) 137
BsaBI GATNNNNATC 1 cut(s) 1298
BsaHI GRCGYC 2 cut(s) 460, 852
BsaI GGTCTC 1 cut(s) 94
BsaJI CCNNGG 1 cut(s) 1022
BsaWI WCCGGW 2 cut(s) 13, 1553
Bsc4I CCNNNNNNNGG 4 cut(s) 749, 1420, 1448, 1451
Bse1I ACTGG 4 cut(s) 19, 493, 781, 1694
Bse3DI GCAATG 1 cut(s) 576
Bse8I GATNNNNATC 1 cut(s) 1298
BseBI CCWGG 3 cut(s) 215, 290, 1415
BseDI CCNNGG 1 cut(s) 1022
BseGI GGATG 3 cut(s) 1381, 1410, 1460
BseJI GATNNNNATC 1 cut(s) 1298
BseLI CCNNNNNNNGG 4 cut(s) 749, 1420, 1448, 1451
BseMI GCAATG 1 cut(s) 576
BseMII CTCAG 3 cut(s) 218, 1175, 1461
BseNI ACTGG 4 cut(s) 19, 493, 781, 1694
BseRI GAGGAG 1 cut(s) 633
BseSI GKGCMC 1 cut(s) 1685
BseXI GCAGC 4 cut(s) 708, 721, 901, 1480
BsgI GTGCAG 1 cut(s) 1479
BshFI GGCC 4 cut(s) 254, 888, 1125, 1441
BshNI GGYRCC 2 cut(s) 285, 335
BsiHKAI GWGCWC 3 cut(s) 99, 643, 1685
BsiSI CCGG 3 cut(s) 14, 137, 1554
BslFI GGGAC 1 cut(s) 119
BslI CCNNNNNNNGG 4 cut(s) 749, 1420, 1448, 1451
BsmAI GTCTC 3 cut(s) 94, 336, 810
BsmFI GGGAC 1 cut(s) 119
BsmI GAATGC 1 cut(s) 1198
BsnI GGCC 4 cut(s) 254, 888, 1125, 1441
Bso31I GGTCTC 1 cut(s) 94
Bsp119I TTCGAA 1 cut(s) 693
Bsp1286I GDGCHC 3 cut(s) 99, 643, 1685
Bsp143I GATC 5 cut(s) 42, 70, 226, 313, 1299
Bsp1720I GCTNAGC 1 cut(s) 1058
Bsp19I CCATGG 1 cut(s) 1022
BspACI CCGC 7 cut(s) 5, 123, 162, 393, 1121, 1667, 1714
BspANI GGCC 4 cut(s) 254, 888, 1125, 1441
BspCNI CTCAG 3 cut(s) 217, 1176, 1462
BspLI GGNNCC 4 cut(s) 287, 337, 887, 1442
BspMAI CTGCAG 1 cut(s) 1143
BspPI GGATC 2 cut(s) 37, 1294
BspQI GCTCTTC 2 cut(s) 648, 1140
BspT104I TTCGAA 1 cut(s) 693
BspT107I GGYRCC 2 cut(s) 285, 335
BspTI CTTAAG 1 cut(s) 452
BspTNI GGTCTC 1 cut(s) 94
BsrBI CCGCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 576
BsrI ACTGG 4 cut(s) 19, 493, 781, 1694
BssECI CCNNGG 1 cut(s) 1022
BssMI GATC 5 cut(s) 42, 70, 226, 313, 1299
BssNAI GTATAC 1 cut(s) 1167
BssNI GRCGYC 2 cut(s) 460, 852
BssT1I CCWWGG 1 cut(s) 1022
Bst1107I GTATAC 1 cut(s) 1167
Bst2UI CCWGG 3 cut(s) 215, 290, 1415
Bst4CI ACNGT 3 cut(s) 517, 729, 1315
Bst6I CTCTTC 3 cut(s) 205, 648, 1140
BstACI GRCGYC 2 cut(s) 460, 852
BstAFI CTTAAG 1 cut(s) 452
BstBI TTCGAA 1 cut(s) 693
BstC8I GCNNGC 6 cut(s) 978, 989, 1123, 1143, 1408, 1665
BstDEI CTNAG 6 cut(s) 204, 661, 1058, 1184, 1436, 1470
BstDSI CCRYGG 1 cut(s) 1022
BstF5I GGATG 3 cut(s) 1381, 1410, 1460
BstKTI GATC 5 cut(s) 45, 73, 229, 316, 1302
BstMAI GTCTC 3 cut(s) 94, 336, 810
BstMBI GATC 5 cut(s) 42, 70, 226, 313, 1299
BstMWI GCNNNNNNNGC 3 cut(s) 718, 914, 1202
BstNI CCWGG 3 cut(s) 215, 290, 1415
BstNSI RCATGY 5 cut(s) 349, 596, 836, 991, 1043
BstPAI GACNNNNGTC 1 cut(s) 935
BstSCI CCNGG 4 cut(s) 135, 213, 288, 1413
BstSFI CTRYAG 2 cut(s) 435, 1139
BstSLI GKGCMC 1 cut(s) 1685
BstV1I GCAGC 4 cut(s) 708, 721, 901, 1480
BstV2I GAAGAC 1 cut(s) 518
BstX2I RGATCY 1 cut(s) 42
BstXI CCANNNNNNTGG 1 cut(s) 1414
BstYI RGATCY 1 cut(s) 42
BstZ17I GTATAC 1 cut(s) 1167
BsuRI GGCC 4 cut(s) 254, 888, 1125, 1441
BtgI CCRYGG 1 cut(s) 1022
BtsCI GGATG 3 cut(s) 1381, 1410, 1460
BtsIMutI CAGTG 1 cut(s) 882
Cac8I GCNNGC 6 cut(s) 978, 989, 1123, 1143, 1408, 1665
Cfr13I GGNCC 5 cut(s) 16, 886, 1123, 1440, 1454
CseI GACGC 1 cut(s) 449
Csp6I GTAC 2 cut(s) 1507, 1711
CviQI GTAC 2 cut(s) 1507, 1711
DdeI CTNAG 6 cut(s) 204, 661, 1058, 1184, 1436, 1470
DpnI GATC 5 cut(s) 44, 72, 228, 315, 1301
DpnII GATC 5 cut(s) 42, 70, 226, 313, 1299
DraI TTTAAA 1 cut(s) 1210
DraIII CACNNNGTG 1 cut(s) 1680
Eam1104I CTCTTC 3 cut(s) 205, 648, 1140
EarI CTCTTC 3 cut(s) 205, 648, 1140
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 1 cut(s) 1022
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 94
Eco47I GGWCC 2 cut(s) 16, 1454
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 1 cut(s) 935
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 2 cut(s) 1440, 1454
EcoRII CCWGG 3 cut(s) 213, 288, 1413
EcoT14I CCWWGG 1 cut(s) 1022
EcoT22I ATGCAT 1 cut(s) 1207
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 1022
FalI AAGNNNNNCTT 4 cut(s) 1181, 1213, 1267, 1299
FaqI GGGAC 1 cut(s) 119
FauI CCCGC 2 cut(s) 386, 1114
FbaI TGATCA 2 cut(s) 70, 226
FblI GTMKAC 2 cut(s) 1166, 1751
Fnu4HI GCNGC 4 cut(s) 710, 722, 915, 1494
FokI GGATG 3 cut(s) 1368, 1397, 1447
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 4 cut(s) 710, 722, 915, 1494
FspBI CTAG 3 cut(s) 732, 1004, 1619
GluI GCNGC 4 cut(s) 710, 722, 915, 1494
GsuI CTGGAG 1 cut(s) 311
HaeIII GGCC 4 cut(s) 254, 888, 1125, 1441
HapII CCGG 3 cut(s) 14, 137, 1554
HgaI GACGC 1 cut(s) 449
Hin1I GRCGYC 2 cut(s) 460, 852
HincII GTYRAC 2 cut(s) 790, 1672
HindII GTYRAC 2 cut(s) 790, 1672
HindIII AAGCTT 2 cut(s) 978, 1356
HinfI GANTC 8 cut(s) 149, 1216, 1280, 1427, 1432, 1481, 1529, 1748
HpaII CCGG 3 cut(s) 14, 137, 1554
HphI GGTGA 1 cut(s) 179
Hpy166II GTNNAC 7 cut(s) 187, 790, 1167, 1401, 1672, 1683, 1752
Hpy188III TCNNGA 4 cut(s) 301, 1469, 1533, 1566
Hpy8I GTNNAC 7 cut(s) 187, 790, 1167, 1401, 1672, 1683, 1752
Hpy99I CGWCG 1 cut(s) 854
HpyAV CCTTC 4 cut(s) 175, 244, 608, 1441
HpyCH4III ACNGT 3 cut(s) 517, 729, 1315
HpyCH4IV ACGT 1 cut(s) 852
HpyF10VI GCNNNNNNNGC 3 cut(s) 718, 914, 1202
HpyF3I CTNAG 6 cut(s) 204, 661, 1058, 1184, 1436, 1470
HpySE526I ACGT 1 cut(s) 852
Hsp92I GRCGYC 2 cut(s) 460, 852
Ksp22I TGATCA 2 cut(s) 70, 226
Kzo9I GATC 5 cut(s) 42, 70, 226, 313, 1299
LguI GCTCTTC 2 cut(s) 648, 1140
LmnI GCTCC 1 cut(s) 94
Lsp1109I GCAGC 4 cut(s) 708, 721, 901, 1480
LweI GCATC 5 cut(s) 875, 1071, 1192, 1317, 1419
MaeI CTAG 3 cut(s) 732, 1004, 1619
MaeII ACGT 1 cut(s) 852
MaeIII GTNAC 5 cut(s) 461, 1088, 1100, 1174, 1621
MalI GATC 5 cut(s) 44, 72, 228, 315, 1301
MbiI CCGCTC 1 cut(s) 125
MboI GATC 5 cut(s) 42, 70, 226, 313, 1299
MfeI CAATTG 1 cut(s) 1044
MflI RGATCY 1 cut(s) 42
MhlI GDGCHC 3 cut(s) 99, 643, 1685
MlyI GAGTC 2 cut(s) 1436, 1757
MmeI TCCRAC 4 cut(s) 510, 591, 873, 1256
Mph1103I ATGCAT 1 cut(s) 1207
MroXI GAANNNNTTC 2 cut(s) 1078, 1599
MseI TTAA 8 cut(s) 453, 701, 770, 1032, 1209, 1265, 1317, 1689
MslI CAYNNNNRTG 2 cut(s) 1210, 1396
MspA1I CMGCKG 2 cut(s) 68, 1716
MspCI CTTAAG 1 cut(s) 452
MspI CCGG 3 cut(s) 14, 137, 1554
MspR9I CCNGG 4 cut(s) 137, 215, 290, 1415
MunI CAATTG 1 cut(s) 1044
Mva1269I GAATGC 1 cut(s) 1198
MvaI CCWGG 3 cut(s) 215, 290, 1415
MwoI GCNNNNNNNGC 3 cut(s) 718, 914, 1202
NciI CCSGG 1 cut(s) 137
NcoI CCATGG 1 cut(s) 1022
NdeII GATC 5 cut(s) 42, 70, 226, 313, 1299
NlaIV GGNNCC 4 cut(s) 287, 337, 887, 1442
NmeAIII GCCGAG 1 cut(s) 744
NmuCI GTSAC 4 cut(s) 461, 1088, 1100, 1174
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 5 cut(s) 349, 596, 836, 991, 1043
NspV TTCGAA 1 cut(s) 693
PaeI GCATGC 1 cut(s) 991
PciI ACATGT 1 cut(s) 832
PciSI GCTCTTC 2 cut(s) 648, 1140
PctI GAATGC 1 cut(s) 1198
PdmI GAANNNNTTC 2 cut(s) 1078, 1599
PfeI GAWTC 6 cut(s) 149, 1216, 1280, 1432, 1481, 1529
PflFI GACNNNGTC 1 cut(s) 517
PfoI TCCNGGA 2 cut(s) 135, 1413
PkrI GCNGC 4 cut(s) 711, 723, 916, 1495
PleI GAGTC 2 cut(s) 1435, 1756
PpsI GAGTC 2 cut(s) 1435, 1756
PpuMI RGGWCCY 1 cut(s) 1454
PscI ACATGT 1 cut(s) 832
PshAI GACNNNNGTC 1 cut(s) 935
Psp124BI GAGCTC 1 cut(s) 99
Psp5II RGGWCCY 1 cut(s) 1454
Psp6I CCWGG 3 cut(s) 213, 288, 1413
PspGI CCWGG 3 cut(s) 213, 288, 1413
PspN4I GGNNCC 4 cut(s) 287, 337, 887, 1442
PspPI GGNCC 5 cut(s) 16, 886, 1123, 1440, 1454
PspPPI RGGWCCY 1 cut(s) 1454
PsrI GAACNNNNNNTAC 2 cut(s) 1606, 1638
PstI CTGCAG 1 cut(s) 1143
PsuI RGATCY 1 cut(s) 42
PsyI GACNNNGTC 1 cut(s) 517
PvuII CAGCTG 1 cut(s) 68
RsaI GTAC 2 cut(s) 1508, 1712
RsaNI GTAC 2 cut(s) 1507, 1711
RseI CAYNNNNRTG 2 cut(s) 1210, 1396
SacI GAGCTC 1 cut(s) 99
SapI GCTCTTC 2 cut(s) 648, 1140
SaqAI TTAA 8 cut(s) 453, 701, 770, 1032, 1209, 1265, 1317, 1689
SatI GCNGC 4 cut(s) 710, 722, 915, 1494
Sau3AI GATC 5 cut(s) 42, 70, 226, 313, 1299
Sau96I GGNCC 5 cut(s) 16, 886, 1123, 1440, 1454
SchI GAGTC 2 cut(s) 1436, 1757
ScrFI CCNGG 4 cut(s) 137, 215, 290, 1415
SduI GDGCHC 3 cut(s) 99, 643, 1685
SfaNI GCATC 5 cut(s) 875, 1071, 1192, 1317, 1419
SfcI CTRYAG 2 cut(s) 435, 1139
SfuI TTCGAA 1 cut(s) 693
SinI GGWCC 2 cut(s) 16, 1454
SmiI ATTTAAAT 1 cut(s) 1210
SmiMI CAYNNNNRTG 2 cut(s) 1210, 1396
SmlI CTYRAG 1 cut(s) 452
SmoI CTYRAG 1 cut(s) 452
SphI GCATGC 1 cut(s) 991
SsiI CCGC 7 cut(s) 5, 123, 162, 393, 1121, 1667, 1714
SspI AATATT 1 cut(s) 1078
SspMI CTAG 3 cut(s) 732, 1004, 1619
SstI GAGCTC 1 cut(s) 99
StyD4I CCNGG 4 cut(s) 135, 213, 288, 1413
StyI CCWWGG 1 cut(s) 1022
SwaI ATTTAAAT 1 cut(s) 1210
TaaI ACNGT 3 cut(s) 517, 729, 1315
TaiI ACGT 1 cut(s) 855
TaqI TCGA 5 cut(s) 102, 300, 693, 1248, 1430
TaqII GACCGA 2 cut(s) 76, 1474
TfiI GAWTC 6 cut(s) 149, 1216, 1280, 1432, 1481, 1529
Tru1I TTAA 8 cut(s) 453, 701, 770, 1032, 1209, 1265, 1317, 1689
Tru9I TTAA 8 cut(s) 453, 701, 770, 1032, 1209, 1265, 1317, 1689
TscAI CASTG 1 cut(s) 882
TseFI GTSAC 4 cut(s) 461, 1088, 1100, 1174
TseI GCWGC 4 cut(s) 709, 721, 914, 1493
Tsp45I GTSAC 4 cut(s) 461, 1088, 1100, 1174
TspRI CASTG 1 cut(s) 882
Tth111I GACNNNGTC 1 cut(s) 517
Vha464I CTTAAG 1 cut(s) 452
VneI GTGCAC 1 cut(s) 1681
VpaK11BI GGWCC 2 cut(s) 16, 1454
XapI RAATTY 1 cut(s) 688
XceI RCATGY 5 cut(s) 349, 596, 836, 991, 1043
XmiI GTMKAC 2 cut(s) 1166, 1751
XmnI GAANNNNTTC 2 cut(s) 1078, 1599
XspI CTAG 3 cut(s) 732, 1004, 1619
ZraI GACGTC 1 cut(s) 853
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.