MD15G1131200.v1.1

Aberrant root formation protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0006059
Physical Location & Seq
Forward (+)
9475192 .. 9479368
4177 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1131200.v1.1.491

Sequence Viewer

Length: 1764 bp
ATGGCGGACAATCTTGATCAGTCCTTCCCCCTTCTTCAAGAAATCCTAAACTCGCTATCCCAATCAGTCGATCAACCCCAAACCTCCGTCTCAGAGCTCATCAGCTTCCTCAATTCAACCCTAGACGCTGCTCTGTCAGACCCAGAAAACGAAGACGCAAAAGCCAACGCCTTCCGAGCTCTCACGAAAATCCACCAATTCGTCTCTTCCCCGTCACTCGACCAGGCGATCATCGAAGCACTCTCCTTTGAGTTGCCAATGGCGGTTTCGAAGTTCGGAGGCGTCTCGGATGGATGCCTGGAGGTCGTTGAGTGCACCATTGATTGCTTTATATCAATGTGTAGTCCACGAGACATGCTTTCGATTCTTTGTGAGGCGTTGGCTCCCCCAAGTGAAGCAATCAGGGATTCTGGTTATATTGCGCCTCTTCTAACTGGGCTTTCGAAAGTGTTTCTTTCCCTTCAGAGGCGTCACTTTGAGCAAGTGAAAGTGGCAGTTCCCATTATCGTTAAAGTTTTGAAGGGCCGGTCTTTGGAGTTGGAAGATGAAGATCCAGAATTTAAGAATTTGTTTGACAGAGCTATGGGGATTGCAAATTCCATACGTGCGGTTTGCCTAAAGTTGGAAGGTGTAGCAAATGAAAAGCTTCGTGCTCTACTTGGTCTTTATGTCTTACAGATTATGGCTGTTGTCAGCATGAATCATAATGTTCCAAGTTCTCAGCCGTTTGTTTTGCAACTGTCTAGTTTTTTCCCATTTTGTGGTTTGTCATATCTTGGTGTGATAACTGGGTCGGATGTTGACAAAATAACTAGGGCAGTAGTTGGAGATGAAGATTATTATATGAGTTGTTTATCCGATGTCAAATGCGGTGCACCTCTTTCAGTGATCTGGGGCCATGCTTCTGATGACGTTGCTGGGGCTGCTGAGGAGGATTTGAATTCCGTCAAGGATGAACTTAAGGATAACCAGACTAAAAGGTGGCTAGCTGTTGGCATGCTAAAGCACATACTAGCTCCTGCCACTCTGCCATGGGAACTTAAAAGACATGCCATCAATTTCTTGATTTGCATTACAGATGGAAATATCTCCCACTGCGATGAACATAATGACTTCTCATCTTACACGACTTCCCTTTTTGCAGCTCTGCAGGCTGTTCAAATGATCATCATGTACGCATCAGATACAGTGCTGAGGAAGAATGCCTTTGAAGCTTTCAAAAGGATTATTGCTGATATTCCAGCTTCTCAGAGGTTCGACATGTTGAAGTCTTTGATCATAAATAGTAATTCTTCCTCGATGATTGCAATCCTTCTGGATATTGTTAAAGGAGAACTGCACAAGGAAAGCTGCCAAAGCGTGGGAAATGACGAAGTACCGCAAGCCAAACCACCTACATTGTTTTGGACTGCCAATGTCCTTGAATTGGTGGAGTTGATTCTGAAGCCCCCGGAGGGCGGACCTCCCTCTTTCCCTGAGGATACTGATGAGGTTCTGTCTGCGCTCAATCTGTACAGATTTGTATTAATTACAGAATCGACAGGAAAAACCAACCACACAGGAGTGATCTCCAGAAGCAATTTACAGAAAGCCTATAAGGGGTGGCTTTTACCCCTACGAACCCAGGTAACCGCCATGATGGCGGAGACCAGGAATGATTACGAGCTTCCAGTTGATGCACTTTGTACTTTAAACCCAATCGAGTTAGTTTTGTACCGATGCATTGAGCTTGTTGAAGATCAGCTCAAGCAACAGTCTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinetochor_Ybp2

Protein Analysis

588

Amino Acids

64.72

Weight (kDa)

4.79

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinetochor_Ybp2 PF08568 376 - 560 9.1e-19 Uncharacterised protein family, YAP/Alf4/glomulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 761, 1360
AciI CCGC 8 cut(s) 5, 263, 608, 870, 1379, 1458, 1632, 1643
AclWI GGATC 1 cut(s) 545
AcsI RAATTY 4 cut(s) 557, 565, 595, 940
AcuI CTGAAG 2 cut(s) 446, 1463
AcyI GRCGYC 2 cut(s) 282, 469
AfaI GTAC 5 cut(s) 1175, 1377, 1514, 1687, 1715
AfiI CCNNNNNNNGG 9 cut(s) 465, 532, 622, 761, 1360, 1426, 1454, 1457, 1599
AflII CTTAAG 1 cut(s) 959
AflIII ACRYGT 1 cut(s) 1260
AjnI CCWGG 4 cut(s) 222, 297, 1623, 1649
AjuI GAANNNNNNNTTGG 2 cut(s) 250, 282
AleI CACNNNNGTG 1 cut(s) 1562
Alw21I GWGCWC 5 cut(s) 99, 181, 317, 655, 877
Alw26I GTCTC 5 cut(s) 94, 208, 289, 345, 1640
Alw44I GTGCAC 2 cut(s) 313, 873
AlwI GGATC 1 cut(s) 545
AoxI GGCC 2 cut(s) 523, 895
ApaLI GTGCAC 2 cut(s) 313, 873
ApeKI GCWGC 4 cut(s) 128, 923, 1142, 1350
ApoI RAATTY 4 cut(s) 557, 565, 595, 940
AseI ATTAAT 1 cut(s) 1526
Asp700I GAANNNNTTC 1 cut(s) 645
AspLEI GCGC 2 cut(s) 424, 1504
AspS9I GGNCC 3 cut(s) 523, 895, 1460
AsuC2I CCSGG 1 cut(s) 1451
AsuII TTCGAA 2 cut(s) 269, 443
AsuNHI GCTAGC 1 cut(s) 985
AvaII GGWCC 1 cut(s) 1460
AxyI CCTNAGG 1 cut(s) 1476
BaeGI GKGCMC 2 cut(s) 317, 877
BanII GRGCYC 2 cut(s) 99, 181
BauI CACGAG 1 cut(s) 348
BbsI GAAGAC 1 cut(s) 159
Bbv12I GWGCWC 5 cut(s) 99, 181, 317, 655, 877
BbvCI CCTCAGC 2 cut(s) 927, 1193
BbvI GCAGC 4 cut(s) 115, 910, 1154, 1337
BccI CCATC 4 cut(s) 284, 1061, 1073, 1633
BceAI ACGGC 1 cut(s) 709
BciT130I CCWGG 4 cut(s) 224, 299, 1625, 1651
BciVI GTATCC 1 cut(s) 1474
BclI TGATCA 3 cut(s) 16, 1164, 1275
BcnI CCSGG 1 cut(s) 1451
BcoDI GTCTC 5 cut(s) 94, 208, 289, 345, 1640
BfaI CTAG 5 cut(s) 122, 744, 813, 986, 1013
BfmI CTRYAG 1 cut(s) 1148
BfrI CTTAAG 1 cut(s) 959
BfuI GTATCC 1 cut(s) 1474
BglI GCCNNNNNGGC 1 cut(s) 1640
BisI GCNGC 4 cut(s) 129, 924, 1143, 1351
BlsI GCNGC 4 cut(s) 130, 925, 1144, 1352
Bme1390I CCNGG 5 cut(s) 224, 299, 1451, 1625, 1651
Bme18I GGWCC 1 cut(s) 1460
BmgT120I GGNCC 3 cut(s) 523, 895, 1460
BmiI GGNNCC 2 cut(s) 384, 896
BmrFI CCNGG 5 cut(s) 224, 299, 1451, 1625, 1651
BmrI ACTGGG 2 cut(s) 444, 798
BmsI GCATC 4 cut(s) 284, 1187, 1666, 1709
BmtI GCTAGC 1 cut(s) 989
BmuI ACTGGG 2 cut(s) 444, 798
BpiI GAAGAC 1 cut(s) 159
BpmI CTGGAG 2 cut(s) 320, 1555
Bpu10I CCTNAGC 2 cut(s) 927, 1193
Bpu14I TTCGAA 2 cut(s) 269, 443
BpuEI CTTGAG 1 cut(s) 1730
BpuMI CCSGG 1 cut(s) 1451
BsaAI YACGTR 1 cut(s) 605
BsaBI GATNNNNATC 2 cut(s) 549, 1307
BsaHI GRCGYC 2 cut(s) 282, 469
BsaI GGTCTC 1 cut(s) 1640
BsaJI CCNNGG 3 cut(s) 1031, 1449, 1623
Bsc4I CCNNNNNNNGG 9 cut(s) 465, 532, 622, 761, 1360, 1426, 1454, 1457, 1599
Bse118I RCCGGY 1 cut(s) 525
Bse1I ACTGG 3 cut(s) 439, 793, 1670
Bse21I CCTNAGG 1 cut(s) 1476
Bse8I GATNNNNATC 2 cut(s) 549, 1307
BseBI CCWGG 4 cut(s) 224, 299, 1625, 1651
BseDI CCNNGG 3 cut(s) 1031, 1449, 1623
BseGI GGATG 4 cut(s) 295, 299, 802, 958
BseJI GATNNNNATC 2 cut(s) 549, 1307
BseLI CCNNNNNNNGG 9 cut(s) 465, 532, 622, 761, 1360, 1426, 1454, 1457, 1599
BseMII CTCAG 6 cut(s) 105, 734, 918, 1184, 1262, 1467
BseNI ACTGG 3 cut(s) 439, 793, 1670
BseRI GAGGAG 1 cut(s) 944
BseSI GKGCMC 2 cut(s) 317, 877
BseXI GCAGC 4 cut(s) 115, 910, 1154, 1337
BseYI CCCAGC 1 cut(s) 917
BsgI GTGCAG 1 cut(s) 1322
BshFI GGCC 2 cut(s) 525, 897
BsiHKAI GWGCWC 5 cut(s) 99, 181, 317, 655, 877
BsiSI CCGG 2 cut(s) 526, 1451
BslI CCNNNNNNNGG 9 cut(s) 465, 532, 622, 761, 1360, 1426, 1454, 1457, 1599
BsmAI GTCTC 5 cut(s) 94, 208, 289, 345, 1640
BsmBI CGTCTC 3 cut(s) 94, 208, 289
BsmI GAATGC 1 cut(s) 1207
BsnI GGCC 2 cut(s) 525, 897
Bso31I GGTCTC 1 cut(s) 1640
Bsp119I TTCGAA 2 cut(s) 269, 443
Bsp1286I GDGCHC 5 cut(s) 99, 181, 317, 655, 877
Bsp1407I TGTACA 1 cut(s) 1512
Bsp143I GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
Bsp19I CCATGG 1 cut(s) 1031
BspACI CCGC 8 cut(s) 5, 263, 608, 870, 1379, 1458, 1632, 1643
BspANI GGCC 2 cut(s) 525, 897
BspCNI CTCAG 6 cut(s) 104, 733, 919, 1185, 1261, 1468
BspLI GGNNCC 2 cut(s) 384, 896
BspMAI CTGCAG 1 cut(s) 1152
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 1 cut(s) 545
BspT104I TTCGAA 2 cut(s) 269, 443
BspTI CTTAAG 1 cut(s) 959
BspTNI GGTCTC 1 cut(s) 1640
BsrFI RCCGGY 1 cut(s) 525
BsrGI TGTACA 1 cut(s) 1512
BsrI ACTGG 3 cut(s) 439, 793, 1670
BssAI RCCGGY 1 cut(s) 525
BssECI CCNNGG 3 cut(s) 1031, 1449, 1623
BssMI GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
BssNI GRCGYC 2 cut(s) 282, 469
BssSI CACGAG 1 cut(s) 348
BssT1I CCWWGG 1 cut(s) 1031
Bst2BI CACGAG 1 cut(s) 348
Bst2UI CCWGG 4 cut(s) 224, 299, 1625, 1651
Bst4CI ACNGT 3 cut(s) 741, 1189, 1755
Bst6I CTCTTC 2 cut(s) 211, 432
BstACI GRCGYC 2 cut(s) 282, 469
BstAFI CTTAAG 1 cut(s) 959
BstAUI TGTACA 1 cut(s) 1512
BstBAI YACGTR 1 cut(s) 605
BstBI TTCGAA 2 cut(s) 269, 443
BstC8I GCNNGC 4 cut(s) 987, 998, 1152, 1383
BstDEI CTNAG 6 cut(s) 91, 720, 927, 1193, 1248, 1476
BstDSI CCRYGG 1 cut(s) 1031
BstEII GGTNACC 1 cut(s) 1627
BstF5I GGATG 4 cut(s) 295, 299, 802, 958
BstHHI GCGC 2 cut(s) 424, 1504
BstKTI GATC 9 cut(s) 19, 73, 231, 553, 891, 1167, 1278, 1569, 1741
BstMAI GTCTC 5 cut(s) 94, 208, 289, 345, 1640
BstMBI GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
BstMWI GCNNNNNNNGC 6 cut(s) 176, 923, 1151, 1211, 1356, 1640
BstNI CCWGG 4 cut(s) 224, 299, 1625, 1651
BstNSI RCATGY 4 cut(s) 358, 1000, 1052, 1264
BstPI GGTNACC 1 cut(s) 1627
BstSCI CCNGG 5 cut(s) 222, 297, 1449, 1623, 1649
BstSFI CTRYAG 1 cut(s) 1148
BstSLI GKGCMC 2 cut(s) 317, 877
BstV1I GCAGC 4 cut(s) 115, 910, 1154, 1337
BstV2I GAAGAC 1 cut(s) 159
BstX2I RGATCY 1 cut(s) 550
BstYI RGATCY 1 cut(s) 550
Bsu36I CCTNAGG 1 cut(s) 1476
BsuI GTATCC 1 cut(s) 1474
BsuRI GGCC 2 cut(s) 525, 897
BtgI CCRYGG 1 cut(s) 1031
BtgZI GCGATG 1 cut(s) 1113
BtsCI GGATG 4 cut(s) 295, 299, 802, 958
BtsI GCAGTG 1 cut(s) 1093
BtsIMutI CAGTG 3 cut(s) 891, 1093, 1194
Cac8I GCNNGC 4 cut(s) 987, 998, 1152, 1383
CfoI GCGC 2 cut(s) 424, 1504
Cfr10I RCCGGY 1 cut(s) 525
Cfr13I GGNCC 3 cut(s) 523, 895, 1460
CseI GACGC 4 cut(s) 134, 164, 271, 458
Csp6I GTAC 5 cut(s) 1174, 1376, 1513, 1686, 1714
CspCI CAANNNNNGTGG 2 cut(s) 1380, 1415
CviAII CATG 9 cut(s) 355, 697, 899, 997, 1032, 1049, 1171, 1261, 1636
CviQI GTAC 5 cut(s) 1174, 1376, 1513, 1686, 1714
DdeI CTNAG 6 cut(s) 91, 720, 927, 1193, 1248, 1476
DpnI GATC 9 cut(s) 18, 72, 230, 552, 890, 1166, 1277, 1568, 1740
DpnII GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
DraI TTTAAA 1 cut(s) 1692
Eam1104I CTCTTC 2 cut(s) 211, 432
EarI CTCTTC 2 cut(s) 211, 432
EciI GGCGGA 3 cut(s) 20, 1473, 1658
Ecl136II GAGCTC 2 cut(s) 97, 179
Eco130I CCWWGG 1 cut(s) 1031
Eco24I GRGCYC 2 cut(s) 99, 181
Eco31I GGTCTC 1 cut(s) 1640
Eco47I GGWCC 1 cut(s) 1460
Eco53kI GAGCTC 2 cut(s) 97, 179
Eco57I CTGAAG 2 cut(s) 446, 1463
Eco81I CCTNAGG 1 cut(s) 1476
Eco91I GGTNACC 1 cut(s) 1627
EcoICRI GAGCTC 2 cut(s) 97, 179
EcoO65I GGTNACC 1 cut(s) 1627
EcoRI GAATTC 1 cut(s) 940
EcoRII CCWGG 4 cut(s) 222, 297, 1623, 1649
EcoT14I CCWWGG 1 cut(s) 1031
EcoT22I ATGCAT 1 cut(s) 1724
EcoT38I GRGCYC 2 cut(s) 99, 181
ErhI CCWWGG 1 cut(s) 1031
Esp3I CGTCTC 3 cut(s) 94, 208, 289
FaeI CATG 9 cut(s) 358, 700, 902, 1000, 1035, 1052, 1174, 1264, 1639
FalI AAGNNNNNCTT 4 cut(s) 438, 470, 1190, 1222
FatI CATG 9 cut(s) 354, 696, 898, 996, 1031, 1048, 1170, 1260, 1635
FbaI TGATCA 3 cut(s) 16, 1164, 1275
Fnu4HI GCNGC 4 cut(s) 129, 924, 1143, 1351
FokI GGATG 4 cut(s) 302, 306, 809, 965
FriOI GRGCYC 2 cut(s) 99, 181
Fsp4HI GCNGC 4 cut(s) 129, 924, 1143, 1351
FspBI CTAG 5 cut(s) 122, 744, 813, 986, 1013
GlaI GCGC 2 cut(s) 423, 1503
GluI GCNGC 4 cut(s) 129, 924, 1143, 1351
GsaI CCCAGC 1 cut(s) 921
GsuI CTGGAG 2 cut(s) 320, 1555
HaeIII GGCC 2 cut(s) 525, 897
HapII CCGG 2 cut(s) 526, 1451
HgaI GACGC 4 cut(s) 134, 164, 271, 458
HhaI GCGC 2 cut(s) 424, 1504
Hin1I GRCGYC 2 cut(s) 282, 469
Hin1II CATG 9 cut(s) 358, 700, 902, 1000, 1035, 1052, 1174, 1264, 1639
Hin6I GCGC 2 cut(s) 422, 1502
HinP1I GCGC 2 cut(s) 422, 1502
HincII GTYRAC 1 cut(s) 802
HindII GTYRAC 1 cut(s) 802
HindIII AAGCTT 2 cut(s) 644, 1212
HinfI GANTC 5 cut(s) 364, 407, 700, 1438, 1535
HpaII CCGG 2 cut(s) 526, 1451
Hpy166II GTNNAC 4 cut(s) 315, 347, 802, 875
Hpy188III TCNNGA 7 cut(s) 14, 38, 184, 554, 1063, 1316, 1572
Hpy8I GTNNAC 4 cut(s) 315, 347, 802, 875
HpyAV CCTTC 7 cut(s) 34, 41, 181, 470, 514, 620, 1322
HpyCH4III ACNGT 3 cut(s) 741, 1189, 1755
HpyCH4IV ACGT 2 cut(s) 604, 912
HpyF10VI GCNNNNNNNGC 6 cut(s) 176, 923, 1151, 1211, 1356, 1640
HpyF3I CTNAG 6 cut(s) 91, 720, 927, 1193, 1248, 1476
HpySE526I ACGT 2 cut(s) 604, 912
Hsp92I GRCGYC 2 cut(s) 282, 469
Hsp92II CATG 9 cut(s) 358, 700, 902, 1000, 1035, 1052, 1174, 1264, 1639
HspAI GCGC 2 cut(s) 422, 1502
Ksp22I TGATCA 3 cut(s) 16, 1164, 1275
Kzo9I GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
LmnI GCTCC 2 cut(s) 388, 1021
Lsp1109I GCAGC 4 cut(s) 115, 910, 1154, 1337
LweI GCATC 4 cut(s) 284, 1187, 1666, 1709
MaeI CTAG 5 cut(s) 122, 744, 813, 986, 1013
MaeII ACGT 2 cut(s) 604, 912
MaeIII GTNAC 3 cut(s) 213, 470, 1627
MalI GATC 9 cut(s) 18, 72, 230, 552, 890, 1166, 1277, 1568, 1740
MboI GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
MflI RGATCY 1 cut(s) 550
MhlI GDGCHC 5 cut(s) 99, 181, 317, 655, 877
MmeI TCCRAC 4 cut(s) 519, 603, 774, 805
Mph1103I ATGCAT 1 cut(s) 1724
MroXI GAANNNNTTC 1 cut(s) 645
MseI TTAA 7 cut(s) 510, 561, 960, 1041, 1326, 1526, 1691
MslI CAYNNNNRTG 2 cut(s) 1098, 1562
MspCI CTTAAG 1 cut(s) 959
MspI CCGG 2 cut(s) 526, 1451
MspR9I CCNGG 5 cut(s) 224, 299, 1451, 1625, 1651
Mva1269I GAATGC 1 cut(s) 1207
MvaI CCWGG 4 cut(s) 224, 299, 1625, 1651
MwoI GCNNNNNNNGC 6 cut(s) 176, 923, 1151, 1211, 1356, 1640
NciI CCSGG 1 cut(s) 1451
NcoI CCATGG 1 cut(s) 1031
NdeII GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
NheI GCTAGC 1 cut(s) 985
NlaIII CATG 9 cut(s) 358, 700, 902, 1000, 1035, 1052, 1174, 1264, 1639
NlaIV GGNNCC 2 cut(s) 384, 896
NmuCI GTSAC 2 cut(s) 213, 470
NsiI ATGCAT 1 cut(s) 1724
NspI RCATGY 4 cut(s) 358, 1000, 1052, 1264
NspV TTCGAA 2 cut(s) 269, 443
OliI CACNNNNGTG 1 cut(s) 1562
PaeI GCATGC 1 cut(s) 1000
PciI ACATGT 1 cut(s) 1260
PctI GAATGC 1 cut(s) 1207
PdmI GAANNNNTTC 1 cut(s) 645
PfeI GAWTC 5 cut(s) 364, 407, 700, 1438, 1535
PflMI CCANNNNNTGG 2 cut(s) 761, 1360
PkrI GCNGC 4 cut(s) 130, 925, 1144, 1352
Ppu21I YACGTR 1 cut(s) 605
PscI ACATGT 1 cut(s) 1260
PshBI ATTAAT 1 cut(s) 1526
Psp124BI GAGCTC 2 cut(s) 99, 181
Psp6I CCWGG 4 cut(s) 222, 297, 1623, 1649
PspEI GGTNACC 1 cut(s) 1627
PspFI CCCAGC 1 cut(s) 917
PspGI CCWGG 4 cut(s) 222, 297, 1623, 1649
PspN4I GGNNCC 2 cut(s) 384, 896
PspPI GGNCC 3 cut(s) 523, 895, 1460
PstI CTGCAG 1 cut(s) 1152
PsuI RGATCY 1 cut(s) 550
RsaI GTAC 5 cut(s) 1175, 1377, 1514, 1687, 1715
RsaNI GTAC 5 cut(s) 1174, 1376, 1513, 1686, 1714
RseI CAYNNNNRTG 2 cut(s) 1098, 1562
SacI GAGCTC 2 cut(s) 99, 181
SaqAI TTAA 7 cut(s) 510, 561, 960, 1041, 1326, 1526, 1691
SatI GCNGC 4 cut(s) 129, 924, 1143, 1351
Sau3AI GATC 9 cut(s) 16, 70, 228, 550, 888, 1164, 1275, 1566, 1738
Sau96I GGNCC 3 cut(s) 523, 895, 1460
ScrFI CCNGG 5 cut(s) 224, 299, 1451, 1625, 1651
SduI GDGCHC 5 cut(s) 99, 181, 317, 655, 877
SfaNI GCATC 4 cut(s) 284, 1187, 1666, 1709
SfcI CTRYAG 1 cut(s) 1148
SfuI TTCGAA 2 cut(s) 269, 443
SinI GGWCC 1 cut(s) 1460
SmiMI CAYNNNNRTG 2 cut(s) 1098, 1562
SmlI CTYRAG 2 cut(s) 959, 1745
SmoI CTYRAG 2 cut(s) 959, 1745
SphI GCATGC 1 cut(s) 1000
SsiI CCGC 8 cut(s) 5, 263, 608, 870, 1379, 1458, 1632, 1643
SspMI CTAG 5 cut(s) 122, 744, 813, 986, 1013
SstI GAGCTC 2 cut(s) 99, 181
StyD4I CCNGG 5 cut(s) 222, 297, 1449, 1623, 1649
StyI CCWWGG 1 cut(s) 1031
TaaI ACNGT 3 cut(s) 741, 1189, 1755
TaiI ACGT 2 cut(s) 607, 915
TatI WGTACW 2 cut(s) 1512, 1685
TfiI GAWTC 5 cut(s) 364, 407, 700, 1438, 1535
Tru1I TTAA 7 cut(s) 510, 561, 960, 1041, 1326, 1526, 1691
Tru9I TTAA 7 cut(s) 510, 561, 960, 1041, 1326, 1526, 1691
TscAI CASTG 3 cut(s) 891, 1100, 1194
TseFI GTSAC 2 cut(s) 213, 470
TseI GCWGC 4 cut(s) 128, 923, 1142, 1350
Tsp45I GTSAC 2 cut(s) 213, 470
TspDTI ATGAA 6 cut(s) 561, 654, 713, 846, 969, 1116
TspGWI ACGGA 2 cut(s) 76, 934
TspRI CASTG 3 cut(s) 891, 1100, 1194
Van91I CCANNNNNTGG 2 cut(s) 761, 1360
Vha464I CTTAAG 1 cut(s) 959
VneI GTGCAC 2 cut(s) 313, 873
VpaK11BI GGWCC 1 cut(s) 1460
VspI ATTAAT 1 cut(s) 1526
XapI RAATTY 4 cut(s) 557, 565, 595, 940
XceI RCATGY 4 cut(s) 358, 1000, 1052, 1264
XmnI GAANNNNTTC 1 cut(s) 645
XspI CTAG 5 cut(s) 122, 744, 813, 986, 1013
Zsp2I ATGCAT 1 cut(s) 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.