RLG00000011623

Aberrant root formation protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0006059
Physical Location & Seq
Forward (+)
11091807 .. 11095666
3860 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011623

Sequence Viewer

Length: 1749 bp
ATGGCGGACCAGTCCTCTGCTGTTCTTCAACAGATCCTAACCTCACTTTCCCAATCAGCTGATCAACCACAAAGCTCGGTCTCGGAGCTCATCGACTTCCTCAATTCAACCTCCGCTCAATCAGTCCCGGACAACGAAGATTCAGAAGCCACCGCCTTCCGAACCCTCACGCAAGTTCACCGATTCATCTCTTCTCAGTCAGACCAGGCAATCTTTGATCAGCTCTTGTTTGAGTTGCCGAAGGCCGTTTCGGAGTTGGGAGGTGTTTCGGAGAGGTGCCTGGAGGTGTTCGAGAGCATTATCGATCGGTTTGTATCAATGTGTGGTGCCAGAGACATGCTTTCAGTTCTTGGCGAAGCATTGGCTTACCTTACCATGAAAGGCGGGGATTACGGCTATGTTGTGCCTCTTTTCTCAGTGTTTTCTAAAGTATTTCCTTGCCTTAAGAGGCGTCACTTTGAGCAAGTAAAAGAAGCTACTGGAATTATCCTCAAAGTTTTGAAGACCGTGTCTTTGGAGTTGGAAGATGAAGCAGAATTACAAAAAATGTTTGGTAGAGCCGTGCGCATTGCTAATTCCATACATGCAGTTTGCTTGAAGTTGGAAGGAGGTGTATATGAAAAGCTTTGTGCTCTTCTTGGTCTTTATGTCTTAGAAATTATGTCTCTTGTCAGCATGAATTTCGAAGTTTTAAGGTCGCAGCCCTTTATGCTGCAACTGTCTAGTTTCTTCCCGTTTTGTGGTTTGTCATATCTCGGCTTAATTACTGGGTCTGATGTTGACAAAATAAGTAGGATTGTAATAGGAGACGATGAAGATTTACATGTTGATTGTTTCTCCGACATCAAATGTGGTGCATCTGTTTCAGTGATTTGGGGCCATGCTTCTAATGAGGTTGCTACGGCTGCTGATGAGGATTTGACTGCTGTCAAGGTTGAACTTCAGAATAATCAGACTAAAAGGTGGCAAGCTTTTGGCATGCTAAAGCACATTCTAGCTTCTGTCAATCTGCCATGGGAACTTAAAAAACTTGCAATTGATTTTCTGCTTAGCATCAGAGGTGGAAATATTTCCCCTTGTGACAAACATAGTGACTTCTCATCTGACATGGAGGGTCTTTTTGCTCTTCTGCAGGCTGTTCAAATGGTCATCATGTATACATCAGACACAGAGCTGAGGAAGAATGCCTTTGATGCATTTAAATGGATTCTGGCTGATATTCCAACTTCTCATAGGTTCGACATTCTAAAGGCTTTAATCACAAAAAGTGATTCTTCATCTATGATTGCAATCCTTTTAGATACTGTTAAAGGAGAGATGCACAAGGAAAGAATGGGAAATGATGAAGCTTTGCAAGAAGAAAATAATACACATCCCCATTCATCGTTGTGGACTGCCAGCGTCCTGGAATTGGTGGAGTCGATTCTAAGGCCCCCGAAGGGAGGACCTCCATCCTTTCCTGAGCATACTGATTCGGTCTTGGCTGCACTCAACTTGTACCGATATGTATTGATAGCAGAATCAAGAGGAAAGACCAACTATACCGGAGTAGTTTCCAGAAGCAATTTACAGAAAGCCTATAATGAATGGCTTCTGCCTCTGCGAACCCTAGTTACAGGCATAGTGGCAAAGAACAAGAATGAAAATGATGAGCTTGCGGTTGACACTCTCCGCACTTTTAACCCAGTTGAATTAGTTTTGTACCGCTGTATAGAACTTGTTGAAGAAAAGCTGAAAGAGTCTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinetochor_Ybp2

Protein Analysis

583

Amino Acids

64.72

Weight (kDa)

5.03

Isoelectric Point (pI)

42.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinetochor_Ybp2 PF08568 370 - 550 4.7e-21 Uncharacterised protein family, YAP/Alf4/glomulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 566
AccB1I GGYRCC 2 cut(s) 276, 326
AccBSI CCGCTC 1 cut(s) 116
AccI GTMKAC 2 cut(s) 1157, 1742
AciI CCGC 7 cut(s) 5, 114, 153, 384, 1658, 1672, 1705
AclWI GGATC 1 cut(s) 28
AcsI RAATTY 1 cut(s) 679
AcuI CTGAAG 1 cut(s) 926
AcyI GRCGYC 1 cut(s) 451
AfaI GTAC 2 cut(s) 1499, 1703
AfiI CCNNNNNNNGG 4 cut(s) 740, 1411, 1439, 1442
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 1 cut(s) 823
AgsI TTSAA 8 cut(s) 29, 108, 502, 598, 938, 1142, 1691, 1724
AjnI CCWGG 3 cut(s) 204, 279, 1404
Alw21I GWGCWC 2 cut(s) 90, 634
Alw26I GTCTC 4 cut(s) 85, 327, 669, 801
AlwI GGATC 1 cut(s) 28
AoxI GGCC 3 cut(s) 243, 877, 1430
ApeKI GCWGC 4 cut(s) 700, 712, 905, 1484
ApoI RAATTY 1 cut(s) 679
ArsI GACNNNNNNTTYG 2 cut(s) 496, 528
Asp700I GAANNNNTTC 2 cut(s) 1069, 1590
AspLEI GCGC 1 cut(s) 567
AspS9I GGNCC 4 cut(s) 7, 877, 1431, 1445
AsuC2I CCSGG 1 cut(s) 128
AsuHPI GGTGA 1 cut(s) 170
AsuII TTCGAA 1 cut(s) 684
AvaII GGWCC 2 cut(s) 7, 1445
BanI GGYRCC 2 cut(s) 276, 326
BanII GRGCYC 1 cut(s) 90
BarI GAAGNNNNNNTAC 2 cut(s) 522, 554
BbsI GAAGAC 1 cut(s) 509
Bbv12I GWGCWC 2 cut(s) 90, 634
BbvCI CCTCAGC 1 cut(s) 1175
BbvI GCAGC 4 cut(s) 699, 712, 892, 1471
BccI CCATC 1 cut(s) 1459
BceAI ACGGC 4 cut(s) 230, 409, 545, 918
BcgI CGANNNNNNTGC 2 cut(s) 664, 698
BciT130I CCWGG 3 cut(s) 206, 281, 1406
BclI TGATCA 2 cut(s) 61, 217
BcnI CCSGG 1 cut(s) 128
BcoDI GTCTC 4 cut(s) 85, 327, 669, 801
BfaI CTAG 3 cut(s) 723, 995, 1610
BfmI CTRYAG 1 cut(s) 1130
BfrI CTTAAG 1 cut(s) 443
BisI GCNGC 4 cut(s) 701, 713, 906, 1485
BlpI GCTNAGC 1 cut(s) 1049
BlsI GCNGC 4 cut(s) 702, 714, 907, 1486
Bme1390I CCNGG 4 cut(s) 128, 206, 281, 1406
Bme18I GGWCC 2 cut(s) 7, 1445
BmgT120I GGNCC 4 cut(s) 7, 877, 1431, 1445
BmiI GGNNCC 4 cut(s) 278, 328, 878, 1433
BmrFI CCNGG 4 cut(s) 128, 206, 281, 1406
BmrI ACTGGG 2 cut(s) 777, 1679
BmsI GCATC 4 cut(s) 866, 1062, 1183, 1308
BmuI ACTGGG 2 cut(s) 777, 1679
BoxI GACNNNNGTC 1 cut(s) 926
BpiI GAAGAC 1 cut(s) 509
BpmI CTGGAG 1 cut(s) 302
Bpu10I CCTNAGC 2 cut(s) 1175, 1461
Bpu1102I GCTNAGC 1 cut(s) 1049
Bpu14I TTCGAA 1 cut(s) 684
BpuMI CCSGG 1 cut(s) 128
Bsa29I ATCGAT 1 cut(s) 303
BsaBI GATNNNNATC 1 cut(s) 1289
BsaHI GRCGYC 1 cut(s) 451
BsaI GGTCTC 1 cut(s) 85
BsaJI CCNNGG 1 cut(s) 1013
BsaWI WCCGGW 1 cut(s) 1544
Bsc4I CCNNNNNNNGG 4 cut(s) 740, 1411, 1439, 1442
Bse1I ACTGG 4 cut(s) 10, 484, 772, 1685
Bse3DI GCAATG 1 cut(s) 567
Bse8I GATNNNNATC 1 cut(s) 1289
BseBI CCWGG 3 cut(s) 206, 281, 1406
BseCI ATCGAT 1 cut(s) 303
BseDI CCNNGG 1 cut(s) 1013
BseGI GGATG 2 cut(s) 1372, 1451
BseJI GATNNNNATC 1 cut(s) 1289
BseLI CCNNNNNNNGG 4 cut(s) 740, 1411, 1439, 1442
BseMI GCAATG 1 cut(s) 567
BseMII CTCAG 4 cut(s) 209, 429, 1166, 1452
BseNI ACTGG 4 cut(s) 10, 484, 772, 1685
BseXI GCAGC 4 cut(s) 699, 712, 892, 1471
BsgI GTGCAG 1 cut(s) 1470
Bsh1285I CGRYCG 1 cut(s) 307
BshFI GGCC 3 cut(s) 245, 879, 1432
BshNI GGYRCC 2 cut(s) 276, 326
BshVI ATCGAT 1 cut(s) 303
BsiEI CGRYCG 1 cut(s) 307
BsiHKAI GWGCWC 2 cut(s) 90, 634
BsiSI CCGG 2 cut(s) 128, 1545
BslFI GGGAC 1 cut(s) 110
BslI CCNNNNNNNGG 4 cut(s) 740, 1411, 1439, 1442
BsmAI GTCTC 4 cut(s) 85, 327, 669, 801
BsmBI CGTCTC 1 cut(s) 801
BsmFI GGGAC 1 cut(s) 110
BsmI GAATGC 1 cut(s) 1189
BsnI GGCC 3 cut(s) 245, 879, 1432
Bso31I GGTCTC 1 cut(s) 85
Bsp119I TTCGAA 1 cut(s) 684
Bsp1286I GDGCHC 2 cut(s) 90, 634
Bsp143I GATC 4 cut(s) 33, 61, 217, 304
Bsp1720I GCTNAGC 1 cut(s) 1049
Bsp19I CCATGG 1 cut(s) 1013
BspACI CCGC 7 cut(s) 5, 114, 153, 384, 1658, 1672, 1705
BspANI GGCC 3 cut(s) 245, 879, 1432
BspCNI CTCAG 4 cut(s) 208, 428, 1167, 1453
BspDI ATCGAT 1 cut(s) 303
BspLI GGNNCC 4 cut(s) 278, 328, 878, 1433
BspMAI CTGCAG 1 cut(s) 1134
BspPI GGATC 1 cut(s) 28
BspQI GCTCTTC 2 cut(s) 639, 1131
BspT104I TTCGAA 1 cut(s) 684
BspT107I GGYRCC 2 cut(s) 276, 326
BspTI CTTAAG 1 cut(s) 443
BspTNI GGTCTC 1 cut(s) 85
BsrBI CCGCTC 1 cut(s) 116
BsrDI GCAATG 1 cut(s) 567
BsrI ACTGG 4 cut(s) 10, 484, 772, 1685
BssECI CCNNGG 1 cut(s) 1013
BssMI GATC 4 cut(s) 33, 61, 217, 304
BssNAI GTATAC 1 cut(s) 1158
BssNI GRCGYC 1 cut(s) 451
BssT1I CCWWGG 1 cut(s) 1013
Bst1107I GTATAC 1 cut(s) 1158
Bst2UI CCWGG 3 cut(s) 206, 281, 1406
Bst4CI ACNGT 3 cut(s) 508, 720, 1306
Bst6I CTCTTC 3 cut(s) 196, 639, 1131
BstACI GRCGYC 1 cut(s) 451
BstAFI CTTAAG 1 cut(s) 443
BstBI TTCGAA 1 cut(s) 684
BstC8I GCNNGC 5 cut(s) 969, 980, 1134, 1399, 1656
BstDEI CTNAG 7 cut(s) 195, 415, 652, 1049, 1175, 1427, 1461
BstDSI CCRYGG 1 cut(s) 1013
BstF5I GGATG 2 cut(s) 1372, 1451
BstHHI GCGC 1 cut(s) 567
BstKTI GATC 4 cut(s) 36, 64, 220, 307
BstMAI GTCTC 4 cut(s) 85, 327, 669, 801
BstMBI GATC 4 cut(s) 33, 61, 217, 304
BstMCI CGRYCG 1 cut(s) 307
BstMWI GCNNNNNNNGC 3 cut(s) 709, 905, 1193
BstNI CCWGG 3 cut(s) 206, 281, 1406
BstNSI RCATGY 4 cut(s) 340, 587, 827, 982
BstPAI GACNNNNGTC 1 cut(s) 926
BstSCI CCNGG 4 cut(s) 126, 204, 279, 1404
BstSFI CTRYAG 1 cut(s) 1130
BstV1I GCAGC 4 cut(s) 699, 712, 892, 1471
BstV2I GAAGAC 1 cut(s) 509
BstX2I RGATCY 1 cut(s) 33
BstXI CCANNNNNNTGG 1 cut(s) 1405
BstYI RGATCY 1 cut(s) 33
BstZ17I GTATAC 1 cut(s) 1158
Bsu15I ATCGAT 1 cut(s) 303
BsuRI GGCC 3 cut(s) 245, 879, 1432
BsuTUI ATCGAT 1 cut(s) 303
BtgI CCRYGG 1 cut(s) 1013
BtsCI GGATG 2 cut(s) 1372, 1451
BtsIMutI CAGTG 2 cut(s) 423, 873
Cac8I GCNNGC 5 cut(s) 969, 980, 1134, 1399, 1656
CfoI GCGC 1 cut(s) 567
Cfr13I GGNCC 4 cut(s) 7, 877, 1431, 1445
ClaI ATCGAT 1 cut(s) 303
CseI GACGC 2 cut(s) 440, 1390
Csp6I GTAC 2 cut(s) 1498, 1702
CviQI GTAC 2 cut(s) 1498, 1702
DdeI CTNAG 7 cut(s) 195, 415, 652, 1049, 1175, 1427, 1461
DpnI GATC 4 cut(s) 35, 63, 219, 306
DpnII GATC 4 cut(s) 33, 61, 217, 304
DraI TTTAAA 1 cut(s) 1201
Eam1104I CTCTTC 3 cut(s) 196, 639, 1131
EarI CTCTTC 3 cut(s) 196, 639, 1131
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 88
Eco130I CCWWGG 1 cut(s) 1013
Eco24I GRGCYC 1 cut(s) 90
Eco31I GGTCTC 1 cut(s) 85
Eco47I GGWCC 2 cut(s) 7, 1445
Eco53kI GAGCTC 1 cut(s) 88
Eco57I CTGAAG 1 cut(s) 926
EcoICRI GAGCTC 1 cut(s) 88
EcoO109I RGGNCCY 2 cut(s) 1431, 1445
EcoRII CCWGG 3 cut(s) 204, 279, 1404
EcoT14I CCWWGG 1 cut(s) 1013
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 1013
Esp3I CGTCTC 1 cut(s) 801
FalI AAGNNNNNCTT 4 cut(s) 1172, 1204, 1258, 1290
FaqI GGGAC 1 cut(s) 110
FauI CCCGC 1 cut(s) 377
FbaI TGATCA 2 cut(s) 61, 217
FblI GTMKAC 2 cut(s) 1157, 1742
Fnu4HI GCNGC 4 cut(s) 701, 713, 906, 1485
FokI GGATG 2 cut(s) 1359, 1438
FriOI GRGCYC 1 cut(s) 90
Fsp4HI GCNGC 4 cut(s) 701, 713, 906, 1485
FspAI RTGCGCAY 1 cut(s) 566
FspBI CTAG 3 cut(s) 723, 995, 1610
FspI TGCGCA 1 cut(s) 566
GlaI GCGC 1 cut(s) 566
GluI GCNGC 4 cut(s) 701, 713, 906, 1485
GsuI CTGGAG 1 cut(s) 302
HaeIII GGCC 3 cut(s) 245, 879, 1432
HapII CCGG 2 cut(s) 128, 1545
HgaI GACGC 2 cut(s) 440, 1390
HhaI GCGC 1 cut(s) 567
Hin1I GRCGYC 1 cut(s) 451
Hin6I GCGC 1 cut(s) 565
HinP1I GCGC 1 cut(s) 565
HincII GTYRAC 2 cut(s) 781, 1663
HindII GTYRAC 2 cut(s) 781, 1663
HindIII AAGCTT 3 cut(s) 623, 969, 1347
HinfI GANTC 9 cut(s) 140, 183, 1207, 1271, 1418, 1423, 1472, 1520, 1739
HpaII CCGG 2 cut(s) 128, 1545
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 6 cut(s) 178, 781, 1158, 1392, 1663, 1743
Hpy188III TCNNGA 4 cut(s) 292, 1460, 1524, 1557
Hpy8I GTNNAC 6 cut(s) 178, 781, 1158, 1392, 1663, 1743
HpyAV CCTTC 4 cut(s) 166, 235, 599, 1432
HpyCH4III ACNGT 3 cut(s) 508, 720, 1306
HpyF10VI GCNNNNNNNGC 3 cut(s) 709, 905, 1193
HpyF3I CTNAG 7 cut(s) 195, 415, 652, 1049, 1175, 1427, 1461
Hsp92I GRCGYC 1 cut(s) 451
HspAI GCGC 1 cut(s) 565
Ksp22I TGATCA 2 cut(s) 61, 217
Kzo9I GATC 4 cut(s) 33, 61, 217, 304
LguI GCTCTTC 2 cut(s) 639, 1131
LmnI GCTCC 1 cut(s) 85
Lsp1109I GCAGC 4 cut(s) 699, 712, 892, 1471
LweI GCATC 4 cut(s) 866, 1062, 1183, 1308
MaeI CTAG 3 cut(s) 723, 995, 1610
MaeIII GTNAC 4 cut(s) 452, 1079, 1091, 1612
MalI GATC 4 cut(s) 35, 63, 219, 306
MbiI CCGCTC 1 cut(s) 116
MboI GATC 4 cut(s) 33, 61, 217, 304
MfeI CAATTG 1 cut(s) 1035
MflI RGATCY 1 cut(s) 33
MhlI GDGCHC 2 cut(s) 90, 634
MlyI GAGTC 2 cut(s) 1427, 1748
MmeI TCCRAC 4 cut(s) 501, 582, 864, 1247
Mph1103I ATGCAT 1 cut(s) 1198
MroXI GAANNNNTTC 2 cut(s) 1069, 1590
MseI TTAA 8 cut(s) 444, 692, 761, 1023, 1200, 1256, 1308, 1680
MslI CAYNNNNRTG 2 cut(s) 1201, 1387
MspA1I CMGCKG 2 cut(s) 59, 1707
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 2 cut(s) 128, 1545
MspR9I CCNGG 4 cut(s) 128, 206, 281, 1406
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 1 cut(s) 1189
MvaI CCWGG 3 cut(s) 206, 281, 1406
MwoI GCNNNNNNNGC 3 cut(s) 709, 905, 1193
NciI CCSGG 1 cut(s) 128
NcoI CCATGG 1 cut(s) 1013
NdeII GATC 4 cut(s) 33, 61, 217, 304
NlaIV GGNNCC 4 cut(s) 278, 328, 878, 1433
NmeAIII GCCGAG 1 cut(s) 735
NmuCI GTSAC 3 cut(s) 452, 1079, 1091
NsbI TGCGCA 1 cut(s) 566
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 4 cut(s) 340, 587, 827, 982
NspV TTCGAA 1 cut(s) 684
PaeI GCATGC 1 cut(s) 982
PciI ACATGT 1 cut(s) 823
PciSI GCTCTTC 2 cut(s) 639, 1131
PctI GAATGC 1 cut(s) 1189
PdmI GAANNNNTTC 2 cut(s) 1069, 1590
PfeI GAWTC 7 cut(s) 140, 183, 1207, 1271, 1423, 1472, 1520
PflFI GACNNNGTC 1 cut(s) 508
PfoI TCCNGGA 2 cut(s) 126, 1404
PkrI GCNGC 4 cut(s) 702, 714, 907, 1486
Ple19I CGATCG 1 cut(s) 307
PleI GAGTC 2 cut(s) 1426, 1747
PpsI GAGTC 2 cut(s) 1426, 1747
PpuMI RGGWCCY 1 cut(s) 1445
PscI ACATGT 1 cut(s) 823
PshAI GACNNNNGTC 1 cut(s) 926
Psp124BI GAGCTC 1 cut(s) 90
Psp5II RGGWCCY 1 cut(s) 1445
Psp6I CCWGG 3 cut(s) 204, 279, 1404
PspGI CCWGG 3 cut(s) 204, 279, 1404
PspN4I GGNNCC 4 cut(s) 278, 328, 878, 1433
PspPI GGNCC 4 cut(s) 7, 877, 1431, 1445
PspPPI RGGWCCY 1 cut(s) 1445
PsrI GAACNNNNNNTAC 2 cut(s) 1597, 1629
PstI CTGCAG 1 cut(s) 1134
PsuI RGATCY 1 cut(s) 33
PsyI GACNNNGTC 1 cut(s) 508
PvuI CGATCG 1 cut(s) 307
PvuII CAGCTG 1 cut(s) 59
RsaI GTAC 2 cut(s) 1499, 1703
RsaNI GTAC 2 cut(s) 1498, 1702
RseI CAYNNNNRTG 2 cut(s) 1201, 1387
SacI GAGCTC 1 cut(s) 90
SapI GCTCTTC 2 cut(s) 639, 1131
SaqAI TTAA 8 cut(s) 444, 692, 761, 1023, 1200, 1256, 1308, 1680
SatI GCNGC 4 cut(s) 701, 713, 906, 1485
Sau3AI GATC 4 cut(s) 33, 61, 217, 304
Sau96I GGNCC 4 cut(s) 7, 877, 1431, 1445
SchI GAGTC 2 cut(s) 1427, 1748
ScrFI CCNGG 4 cut(s) 128, 206, 281, 1406
SduI GDGCHC 2 cut(s) 90, 634
SfaNI GCATC 4 cut(s) 866, 1062, 1183, 1308
SfcI CTRYAG 1 cut(s) 1130
SfuI TTCGAA 1 cut(s) 684
SinI GGWCC 2 cut(s) 7, 1445
SmiI ATTTAAAT 1 cut(s) 1201
SmiMI CAYNNNNRTG 2 cut(s) 1201, 1387
SmlI CTYRAG 1 cut(s) 443
SmoI CTYRAG 1 cut(s) 443
SphI GCATGC 1 cut(s) 982
SsiI CCGC 7 cut(s) 5, 114, 153, 384, 1658, 1672, 1705
SspI AATATT 1 cut(s) 1069
SspMI CTAG 3 cut(s) 723, 995, 1610
SstI GAGCTC 1 cut(s) 90
StyD4I CCNGG 4 cut(s) 126, 204, 279, 1404
StyI CCWWGG 1 cut(s) 1013
SwaI ATTTAAAT 1 cut(s) 1201
TaaI ACNGT 3 cut(s) 508, 720, 1306
TaqI TCGA 6 cut(s) 93, 291, 303, 684, 1239, 1421
TaqII GACCGA 2 cut(s) 67, 1465
TfiI GAWTC 7 cut(s) 140, 183, 1207, 1271, 1423, 1472, 1520
Tru1I TTAA 8 cut(s) 444, 692, 761, 1023, 1200, 1256, 1308, 1680
Tru9I TTAA 8 cut(s) 444, 692, 761, 1023, 1200, 1256, 1308, 1680
TscAI CASTG 2 cut(s) 423, 873
TseFI GTSAC 3 cut(s) 452, 1079, 1091
TseI GCWGC 4 cut(s) 700, 712, 905, 1484
Tsp45I GTSAC 3 cut(s) 452, 1079, 1091
TspRI CASTG 2 cut(s) 423, 873
Tth111I GACNNNGTC 1 cut(s) 508
Vha464I CTTAAG 1 cut(s) 443
VpaK11BI GGWCC 2 cut(s) 7, 1445
XapI RAATTY 1 cut(s) 679
XceI RCATGY 4 cut(s) 340, 587, 827, 982
XmiI GTMKAC 2 cut(s) 1157, 1742
XmnI GAANNNNTTC 2 cut(s) 1069, 1590
XspI CTAG 3 cut(s) 723, 995, 1610
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.