FvH4_2g29290

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0016269
Physical Location & Seq
Forward (+)
22739537 .. 22741793
2257 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29290.t1

Sequence Viewer

Length: 1854 bp
ATGGGATCAGTGACTTCAGGTGAAGGGTATTTGAGTCTCACACCAGAACAACAAGAGAGCAACTCAAGTTCTTCATCGGTTTTACCGTTATACAAAGTTGGGAGGGTTTTGTATCGGTACCCAGTTCCGGCATGGTCTTCTTATTTCTCCACAACCTTCACTGTCAGGATTTCGGCTTTCGCAAATACAACTGGCTCTGGAGATGGAATGGCATTTGTTTTTGCTCAGGATAGTAGTCCTTCTCCTCCTGATAGCTATGGCTCATTTCTTGGACTCCTAGACAGATCAACAGAAGGTGGGGTGATTAAGCAATTGGGAATTGAGCTAGACACTTTCATGAACCAAGAGTTCGATCCAGATGACAATCACATTGCCATTGACACAACAAGCATTATGGACCCAGTTGCAATACAGAGTCTCACCAGTTCAGGCATCAACCTCAAGAGTGGAAGAGACATCAAGTTCAGTATTGAGTATGATGGTTGGAACCAAATCCTCCATGTTTCAGCTGGCTACTCTGAGAACCCACTAGTCACCATCTTAAACCATTCAATCTCCATGTTTGACAGTACTGTTCCGAGCTTCGTCTATGTTGGTTTCACAGCCTCTACTGGAACTCTGCCTGAGAGCCACCAAGTCCGGGATTGGGTTTTCACCTCCCTTAAGTTGCCAAATCCTAGTCCTCCTGGGAATGACAAAGTGCATAAGAGAAAGACCAGGAACATTTGGCTTGTTGATGTGCCTGTTTTTCTATGTGTGTTGGTTTTGATTGCCTTTACTTACCCTTTGATAATGAGAGTTGTGAAGAGAAATCACTGTGGTGGGAATGAGAGAGAAGACATAGAAAGCAGGACAAGAAAAGCTGTAAATGCCCCTAAAATGTTTAGTTACAAGGAAATTTCAAGGGCCACCCAGAACTTCAGCAAGGAAAATCTGATTGGGGCAGGTGCATTTGGAGTTGTATACAAAGGCATCATACCAGATGACATTGATGTTCCTCCTAAAACTATTGCTGTCAAGAGGATCACAGCAACCTCCAAACAAGGGGAAAGGGAGTACTTTGCAGAAATATGCACAATTGGGCGCCTAAGGCACAAGAACATTGTACAACTCCAAGGCTGGTGTAACGAAAACGAAAATCGTTGCTTGATCTATGAATTCATGCCTAATGGGAGCCTCGACCGTTACATTGGAAAGGGCATCCTTGATTGGAAAACAAGGTACAATATCTTAACAGGTTTGGCATCAGCATTGCTGTACCTCCATGAAGAATGTGGCACCCCTGTGGTACACAGAGACATTAAACCCAACAATGTGATGTTGGACTCTGATTACAACGCTCATCTAGGTGACTTTGGCCTAGCAAGACTAATGCTACAAGATCCCGAGTTTACGATTCCCCTAGCCGGTACTCCCGGGTACTTGGCCCCGGAAGTGCTAGGGTTCGCGGGAAAAGCTACCCCGGAATCGGATGTCTATAGCTTTGGAATGGTGGTGCTAGAAGTGGTGTGTGGGAGAAGATCAAAGGGTATCTTCGACGACTATAGTTTAGTAGAAAATGTATGGAATTTGTACGCGAAAGACGAGCTGCTCGAGTGTGTGGATCAAGTAGTGTTTGATGGGAAATTTGAGGAAGAACAAGTGAAGAGGACATTGATTGTTGGCCTTGCTTGCTTGCACACAGATTTTACGCTCAGACCAAAGATAAGGAAGGTGGTGCAGATTTTGATGAACCCAAATGAGCCTCTACTGGATTTGCCAGATACAAGGCCAAGGCCTAGTGCAGTATATCTATCAGTATCTTCTTCTGCTCCCAGAACCACTAATTTTGACTCTGCTACCATGATGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

618

Amino Acids

68.58

Weight (kDa)

5.59

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 5 - 222 3.8e-39 Legume lectin domain
Lectin_L-type_dom PF18483 34 - 214 1.5e-14 Legume lectin beta-barrel domain
Pkinase PF00069 308 - 572 9.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 310 - 536 1.1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29290
malus_domestica MD08G1148700.v1.1 MD08G1148800.v1.1 MD08G1212600.v1.1 MD15G1124000.v1.1
prunus_persica Prupe.1G479400_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298101
rosa_laevigata RLG00000011534
rosa_multiflora Rmu_sc0002800.1_g000004
rosa_rugosa Rorug06G0278900
rosa_samantha Rh6AG389000 Rh6BG397300 Rh6CG403200 Rh6DG389800
rosa_wichuraiana Rw6G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 935
Acc36I ACCTGC 1 cut(s) 935
Acc65I GGTACC 1 cut(s) 117
AccB1I GGYRCC 3 cut(s) 117, 1083, 1277
AccI GTMKAC 1 cut(s) 963
AccII CGCG 2 cut(s) 1448, 1577
AciI CCGC 1 cut(s) 1448
AclWI GGATC 5 cut(s) 13, 347, 1031, 1376, 1611
AcsI RAATTY 4 cut(s) 897, 1157, 1567, 1625
AcuI CTGAAG 1 cut(s) 904
AcyI GRCGYC 1 cut(s) 1084
AfiI CCNNNNNNNGG 6 cut(s) 127, 640, 646, 1044, 1406, 1468
AflII CTTAAG 1 cut(s) 662
AgsI TTSAA 2 cut(s) 552, 903
AhlI ACTAGT 1 cut(s) 529
AjnI CCWGG 2 cut(s) 685, 716
AjuI GAANNNNNNNTTGG 2 cut(s) 921, 953
AleI CACNNNNGTG 2 cut(s) 819, 1283
AluBI AGCT 8 cut(s) 255, 325, 509, 582, 863, 1457, 1482, 1588
AluI AGCT 8 cut(s) 255, 325, 509, 582, 863, 1457, 1482, 1588
Alw26I GTCTC 4 cut(s) 41, 422, 447, 1290
AlwI GGATC 5 cut(s) 13, 347, 1031, 1376, 1611
Ama87I CYCGRG 3 cut(s) 1385, 1415, 1592
AoxI GGCC 6 cut(s) 906, 1357, 1425, 1663, 1769, 1775
ApeKI GCWGC 1 cut(s) 1588
ApoI RAATTY 4 cut(s) 897, 1157, 1567, 1625
Asp718I GGTACC 1 cut(s) 117
AspLEI GCGC 1 cut(s) 1086
AspS9I GGNCC 3 cut(s) 397, 906, 1426
AsuC2I CCSGG 5 cut(s) 641, 1416, 1417, 1430, 1463
AsuHPI GGTGA 6 cut(s) 32, 313, 412, 526, 646, 1361
AvaI CYCGRG 3 cut(s) 1385, 1415, 1592
AvaII GGWCC 1 cut(s) 397
AxyI CCTNAGG 1 cut(s) 1088
BanI GGYRCC 3 cut(s) 117, 1083, 1277
BbsI GAAGAC 2 cut(s) 129, 843
BbvI GCAGC 1 cut(s) 1575
BccI CCATC 4 cut(s) 197, 473, 545, 1613
BciT130I CCWGG 2 cut(s) 687, 718
BcnI CCSGG 5 cut(s) 641, 1416, 1417, 1430, 1463
BcoDI GTCTC 4 cut(s) 41, 422, 447, 1290
BcuI ACTAGT 1 cut(s) 529
BfmI CTRYAG 2 cut(s) 1477, 1543
BfoI RGCGCY 1 cut(s) 1087
BfrI CTTAAG 1 cut(s) 662
BfuAI ACCTGC 1 cut(s) 935
BisI GCNGC 1 cut(s) 1589
BlsI GCNGC 1 cut(s) 1590
BmcAI AGTACT 2 cut(s) 571, 1058
Bme1390I CCNGG 7 cut(s) 641, 687, 718, 1416, 1417, 1430, 1463
Bme18I GGWCC 1 cut(s) 397
BmeT110I CYCGRG 3 cut(s) 1385, 1415, 1592
BmgT120I GGNCC 3 cut(s) 397, 906, 1426
BmiI GGNNCC 7 cut(s) 119, 399, 488, 1085, 1175, 1279, 1428
BmrFI CCNGG 7 cut(s) 641, 687, 718, 1416, 1417, 1430, 1463
BmrI ACTGGG 2 cut(s) 116, 395
BmsI GCATC 4 cut(s) 441, 981, 1209, 1253
BmuI ACTGGG 2 cut(s) 116, 395
BpiI GAAGAC 2 cut(s) 129, 843
BplI GAGNNNNNCTC 2 cut(s) 47, 79
BpmI CTGGAG 1 cut(s) 219
Bpu10I CCTNAGC 1 cut(s) 225
BpuEI CTTGAG 2 cut(s) 49, 425
BpuMI CCSGG 5 cut(s) 641, 1416, 1417, 1430, 1463
BsaBI GATNNNNATC 1 cut(s) 363
BsaHI GRCGYC 1 cut(s) 1084
BsaJI CCNNGG 6 cut(s) 686, 1114, 1415, 1428, 1461, 1772
Bsc4I CCNNNNNNNGG 6 cut(s) 127, 640, 646, 1044, 1406, 1468
Bse118I RCCGGY 1 cut(s) 1406
Bse1I ACTGG 6 cut(s) 122, 196, 401, 423, 616, 1755
Bse21I CCTNAGG 1 cut(s) 1088
Bse3DI GCAATG 2 cut(s) 369, 1250
Bse8I GATNNNNATC 1 cut(s) 363
BseBI CCWGG 2 cut(s) 687, 718
BseDI CCNNGG 6 cut(s) 686, 1114, 1415, 1428, 1461, 1772
BseGI GGATG 2 cut(s) 1200, 1477
BseJI GATNNNNATC 1 cut(s) 363
BseLI CCNNNNNNNGG 6 cut(s) 127, 640, 646, 1044, 1406, 1468
BseMI GCAATG 2 cut(s) 369, 1250
BseMII CTCAG 4 cut(s) 239, 510, 615, 1708
BseNI ACTGG 6 cut(s) 122, 196, 401, 423, 616, 1755
BseRI GAGGAG 1 cut(s) 234
BseXI GCAGC 1 cut(s) 1575
BsgI GTGCAG 2 cut(s) 1739, 1803
Bsh1236I CGCG 2 cut(s) 1448, 1577
Bsh1285I CGRYCG 1 cut(s) 1183
BshFI GGCC 6 cut(s) 908, 1359, 1427, 1665, 1771, 1777
BshNI GGYRCC 3 cut(s) 117, 1083, 1277
BsiEI CGRYCG 1 cut(s) 1183
BsiHKCI CYCGRG 3 cut(s) 1385, 1415, 1592
BsiSI CCGG 6 cut(s) 128, 640, 1407, 1416, 1430, 1463
BslI CCNNNNNNNGG 6 cut(s) 127, 640, 646, 1044, 1406, 1468
BsmAI GTCTC 4 cut(s) 41, 422, 447, 1290
BsnI GGCC 6 cut(s) 908, 1359, 1427, 1665, 1771, 1777
BsoBI CYCGRG 3 cut(s) 1385, 1415, 1592
Bsp1407I TGTACA 1 cut(s) 1105
Bsp143I GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
BspACI CCGC 1 cut(s) 1448
BspANI GGCC 6 cut(s) 908, 1359, 1427, 1665, 1771, 1777
BspCNI CTCAG 4 cut(s) 238, 511, 616, 1707
BspFNI CGCG 2 cut(s) 1448, 1577
BspHI TCATGA 1 cut(s) 336
BspLI GGNNCC 7 cut(s) 119, 399, 488, 1085, 1175, 1279, 1428
BspMI ACCTGC 1 cut(s) 935
BspPI GGATC 5 cut(s) 13, 347, 1031, 1376, 1611
BspT107I GGYRCC 3 cut(s) 117, 1083, 1277
BspTI CTTAAG 1 cut(s) 662
BsrDI GCAATG 2 cut(s) 369, 1250
BsrFI RCCGGY 1 cut(s) 1406
BsrGI TGTACA 1 cut(s) 1105
BsrI ACTGG 6 cut(s) 122, 196, 401, 423, 616, 1755
BssAI RCCGGY 1 cut(s) 1406
BssECI CCNNGG 6 cut(s) 686, 1114, 1415, 1428, 1461, 1772
BssMI GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
BssNAI GTATAC 1 cut(s) 964
BssNI GRCGYC 1 cut(s) 1084
BssT1I CCWWGG 2 cut(s) 1114, 1772
Bst1107I GTATAC 1 cut(s) 964
Bst2UI CCWGG 2 cut(s) 687, 718
Bst4CI ACNGT 6 cut(s) 87, 163, 569, 574, 818, 1184
Bst6I CTCTTC 3 cut(s) 445, 800, 1640
BstACI GRCGYC 1 cut(s) 1084
BstAFI CTTAAG 1 cut(s) 662
BstAUI TGTACA 1 cut(s) 1105
BstC8I GCNNGC 3 cut(s) 511, 1672, 1676
BstDEI CTNAG 5 cut(s) 225, 519, 624, 1088, 1694
BstF5I GGATG 2 cut(s) 1200, 1477
BstFNI CGCG 2 cut(s) 1448, 1577
BstH2I RGCGCY 1 cut(s) 1087
BstHHI GCGC 1 cut(s) 1086
BstKTI GATC 8 cut(s) 8, 287, 355, 1026, 1152, 1384, 1523, 1606
BstMAI GTCTC 4 cut(s) 41, 422, 447, 1290
BstMBI GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
BstMCI CGRYCG 1 cut(s) 1183
BstMWI GCNNNNNNNGC 4 cut(s) 869, 1090, 1454, 1671
BstNI CCWGG 2 cut(s) 687, 718
BstSCI CCNGG 7 cut(s) 639, 685, 716, 1414, 1415, 1428, 1461
BstSFI CTRYAG 2 cut(s) 1477, 1543
BstUI CGCG 2 cut(s) 1448, 1577
BstV1I GCAGC 1 cut(s) 1575
BstV2I GAAGAC 2 cut(s) 129, 843
BstX2I RGATCY 1 cut(s) 1381
BstYI RGATCY 1 cut(s) 1381
BstZ17I GTATAC 1 cut(s) 964
Bsu36I CCTNAGG 1 cut(s) 1088
BsuRI GGCC 6 cut(s) 908, 1359, 1427, 1665, 1771, 1777
BtsCI GGATG 2 cut(s) 1200, 1477
BtsIMutI CAGTG 3 cut(s) 15, 159, 814
BveI ACCTGC 1 cut(s) 935
Cac8I GCNNGC 3 cut(s) 511, 1672, 1676
CciI TCATGA 1 cut(s) 336
CfoI GCGC 1 cut(s) 1086
Cfr10I RCCGGY 1 cut(s) 1406
Cfr13I GGNCC 3 cut(s) 397, 906, 1426
Cfr9I CCCGGG 1 cut(s) 1415
CspCI CAANNNNNGTGG 2 cut(s) 1810, 1845
CviAII CATG 7 cut(s) 132, 337, 500, 559, 1162, 1265, 1843
DdeI CTNAG 5 cut(s) 225, 519, 624, 1088, 1694
DinI GGCGCC 1 cut(s) 1085
DpnI GATC 8 cut(s) 7, 286, 354, 1025, 1151, 1383, 1522, 1605
DpnII GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
Eam1104I CTCTTC 3 cut(s) 445, 800, 1640
EarI CTCTTC 3 cut(s) 445, 800, 1640
Eco130I CCWWGG 2 cut(s) 1114, 1772
Eco147I AGGCCT 1 cut(s) 1777
Eco47I GGWCC 1 cut(s) 397
Eco57I CTGAAG 1 cut(s) 904
Eco81I CCTNAGG 1 cut(s) 1088
Eco88I CYCGRG 3 cut(s) 1385, 1415, 1592
EcoRI GAATTC 1 cut(s) 1157
EcoRII CCWGG 2 cut(s) 685, 716
EcoT14I CCWWGG 2 cut(s) 1114, 1772
EgeI GGCGCC 1 cut(s) 1085
EheI GGCGCC 1 cut(s) 1085
ErhI CCWWGG 2 cut(s) 1114, 1772
FaeI CATG 7 cut(s) 135, 340, 503, 562, 1165, 1268, 1846
FalI AAGNNNNNCTT 2 cut(s) 1517, 1549
FatI CATG 7 cut(s) 131, 336, 499, 558, 1161, 1264, 1842
FauI CCCGC 1 cut(s) 1441
FblI GTMKAC 1 cut(s) 963
Fnu4HI GCNGC 1 cut(s) 1589
FokI GGATG 2 cut(s) 1187, 1484
Fsp4HI GCNGC 1 cut(s) 1589
GlaI GCGC 1 cut(s) 1085
GluI GCNGC 1 cut(s) 1589
GsuI CTGGAG 1 cut(s) 219
HaeII RGCGCY 1 cut(s) 1087
HaeIII GGCC 6 cut(s) 908, 1359, 1427, 1665, 1771, 1777
HapII CCGG 6 cut(s) 128, 640, 1407, 1416, 1430, 1463
HhaI GCGC 1 cut(s) 1086
Hin1I GRCGYC 1 cut(s) 1084
Hin1II CATG 7 cut(s) 135, 340, 503, 562, 1165, 1268, 1846
Hin6I GCGC 1 cut(s) 1084
HinP1I GCGC 1 cut(s) 1084
HinfI GANTC 7 cut(s) 34, 273, 415, 1325, 1396, 1466, 1832
HpaII CCGG 6 cut(s) 128, 640, 1407, 1416, 1430, 1463
HphI GGTGA 6 cut(s) 32, 313, 412, 526, 646, 1361
Hpy166II GTNNAC 3 cut(s) 964, 1291, 1392
Hpy188I TCNGA 6 cut(s) 520, 579, 936, 1330, 1471, 1697
Hpy188III TCNNGA 9 cut(s) 166, 198, 227, 248, 337, 356, 442, 1018, 1385
Hpy8I GTNNAC 3 cut(s) 964, 1291, 1392
Hpy99I CGWCG 1 cut(s) 1541
HpyAV CCTTC 5 cut(s) 17, 166, 249, 287, 1705
HpyCH4III ACNGT 6 cut(s) 87, 163, 569, 574, 818, 1184
HpyCH4V TGCA 8 cut(s) 407, 703, 950, 1064, 1074, 1678, 1720, 1784
HpyF10VI GCNNNNNNNGC 4 cut(s) 869, 1090, 1454, 1671
HpyF3I CTNAG 5 cut(s) 225, 519, 624, 1088, 1694
Hsp92I GRCGYC 1 cut(s) 1084
Hsp92II CATG 7 cut(s) 135, 340, 503, 562, 1165, 1268, 1846
HspAI GCGC 1 cut(s) 1084
KasI GGCGCC 1 cut(s) 1083
KpnI GGTACC 1 cut(s) 121
Kzo9I GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
LmnI GCTCC 2 cut(s) 1173, 1816
Lsp1109I GCAGC 1 cut(s) 1575
LweI GCATC 4 cut(s) 441, 981, 1209, 1253
MaeIII GTNAC 6 cut(s) 10, 532, 887, 1124, 1184, 1349
MalI GATC 8 cut(s) 7, 286, 354, 1025, 1151, 1383, 1522, 1605
MboI GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
MfeI CAATTG 2 cut(s) 311, 1077
MflI RGATCY 1 cut(s) 1381
MluCI AATT 8 cut(s) 311, 318, 897, 1077, 1157, 1567, 1625, 1825
Mly113I GGCGCC 1 cut(s) 1084
MlyI GAGTC 5 cut(s) 43, 267, 424, 1319, 1826
MmeI TCCRAC 2 cut(s) 464, 1302
MseI TTAA 5 cut(s) 306, 542, 663, 1232, 1302
MslI CAYNNNNRTG 4 cut(s) 335, 819, 1283, 1347
MspA1I CMGCKG 1 cut(s) 509
MspCI CTTAAG 1 cut(s) 662
MspI CCGG 6 cut(s) 128, 640, 1407, 1416, 1430, 1463
MspR9I CCNGG 7 cut(s) 641, 687, 718, 1416, 1417, 1430, 1463
MunI CAATTG 2 cut(s) 311, 1077
MvaI CCWGG 2 cut(s) 687, 718
MvnI CGCG 2 cut(s) 1448, 1577
MwoI GCNNNNNNNGC 4 cut(s) 869, 1090, 1454, 1671
NarI GGCGCC 1 cut(s) 1084
NciI CCSGG 5 cut(s) 641, 1416, 1417, 1430, 1463
NdeII GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
NlaIII CATG 7 cut(s) 135, 340, 503, 562, 1165, 1268, 1846
NlaIV GGNNCC 7 cut(s) 119, 399, 488, 1085, 1175, 1279, 1428
NmuCI GTSAC 3 cut(s) 10, 532, 1349
OliI CACNNNNGTG 2 cut(s) 819, 1283
PaeR7I CTCGAG 1 cut(s) 1592
PagI TCATGA 1 cut(s) 336
PaqCI CACCTGC 1 cut(s) 935
PceI AGGCCT 1 cut(s) 1777
PcsI WCGNNNNNNNCGW 3 cut(s) 83, 1581, 1590
PfeI GAWTC 2 cut(s) 1396, 1466
PfoI TCCNGGA 1 cut(s) 639
PkrI GCNGC 1 cut(s) 1590
PleI GAGTC 5 cut(s) 42, 267, 423, 1319, 1826
PluTI GGCGCC 1 cut(s) 1087
PpsI GAGTC 5 cut(s) 42, 267, 423, 1319, 1826
Psp6I CCWGG 2 cut(s) 685, 716
PspGI CCWGG 2 cut(s) 685, 716
PspN4I GGNNCC 7 cut(s) 119, 399, 488, 1085, 1175, 1279, 1428
PspPI GGNCC 3 cut(s) 397, 906, 1426
PspXI VCTCGAGB 1 cut(s) 1592
PsuI RGATCY 1 cut(s) 1381
PvuII CAGCTG 1 cut(s) 509
RseI CAYNNNNRTG 4 cut(s) 335, 819, 1283, 1347
SaqAI TTAA 5 cut(s) 306, 542, 663, 1232, 1302
SatI GCNGC 1 cut(s) 1589
Sau3AI GATC 8 cut(s) 5, 284, 352, 1023, 1149, 1381, 1520, 1603
Sau96I GGNCC 3 cut(s) 397, 906, 1426
ScaI AGTACT 2 cut(s) 571, 1058
SchI GAGTC 5 cut(s) 43, 267, 424, 1319, 1826
ScrFI CCNGG 7 cut(s) 641, 687, 718, 1416, 1417, 1430, 1463
SfaNI GCATC 4 cut(s) 441, 981, 1209, 1253
SfcI CTRYAG 2 cut(s) 1477, 1543
SfoI GGCGCC 1 cut(s) 1085
Sfr274I CTCGAG 1 cut(s) 1592
SinI GGWCC 1 cut(s) 397
SlaI CTCGAG 1 cut(s) 1592
SmaI CCCGGG 1 cut(s) 1417
SmiMI CAYNNNNRTG 4 cut(s) 335, 819, 1283, 1347
SmlI CTYRAG 4 cut(s) 64, 440, 662, 1592
SmoI CTYRAG 4 cut(s) 64, 440, 662, 1592
SpeI ACTAGT 1 cut(s) 529
Sse9I AATT 8 cut(s) 311, 318, 897, 1077, 1157, 1567, 1625, 1825
SseBI AGGCCT 1 cut(s) 1777
SsiI CCGC 1 cut(s) 1448
SspDI GGCGCC 1 cut(s) 1083
StuI AGGCCT 1 cut(s) 1777
StyD4I CCNGG 7 cut(s) 639, 685, 716, 1414, 1415, 1428, 1461
StyI CCWWGG 2 cut(s) 1114, 1772
TaaI ACNGT 6 cut(s) 87, 163, 569, 574, 818, 1184
TaqI TCGA 4 cut(s) 351, 1179, 1536, 1593
TasI AATT 8 cut(s) 311, 318, 897, 1077, 1157, 1567, 1625, 1825
TatI WGTACW 3 cut(s) 569, 1056, 1105
TfiI GAWTC 2 cut(s) 1396, 1466
Tru1I TTAA 5 cut(s) 306, 542, 663, 1232, 1302
Tru9I TTAA 5 cut(s) 306, 542, 663, 1232, 1302
TscAI CASTG 3 cut(s) 15, 166, 821
TseFI GTSAC 3 cut(s) 10, 532, 1349
TseI GCWGC 1 cut(s) 1588
Tsp45I GTSAC 3 cut(s) 10, 532, 1349
TspDTI ATGAA 7 cut(s) 63, 325, 353, 1150, 1170, 1281, 1745
TspMI CCCGGG 1 cut(s) 1415
TspRI CASTG 3 cut(s) 15, 166, 821
Vha464I CTTAAG 1 cut(s) 662
VpaK11BI GGWCC 1 cut(s) 397
XapI RAATTY 4 cut(s) 897, 1157, 1567, 1625
XcmI CCANNNNNNNNNTGG 3 cut(s) 129, 506, 1271
XhoI CTCGAG 1 cut(s) 1592
XmaI CCCGGG 1 cut(s) 1415
XmiI GTMKAC 1 cut(s) 963
ZrmI AGTACT 2 cut(s) 571, 1058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.