MD15G1124000.v1.1

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0016269
Physical Location & Seq
Reverse (-)
8981340 .. 8983936
2597 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1124000.v1.1.491

Sequence Viewer

Length: 2007 bp
ATGGCTCCCTCCAATTTACAGTTAACCATGTTTTTTCTTTTCTTCTCTACCTTTCTCATCAGCAGCCAAGCCTTTGTGTACTCCATGAACGATCAAACACATACAACTTTCTCCTTCCCCACCTTCACTCCTCAAAGCTGTAACAATGGTGACCTAATATGCATGGGCTCGGTGACCGCAAATAATGGATATTTGAACCTCATACCAGAGCCACAAGAAGCCAATTCTAGTTCATCCTCTTCCTTACAATTGTATAAGGTTGGAAGGGTTTTGTATCACCTCCCGGTGATTGCCTGGCCGGCGTTTATCTCCACCACCTTTACTGTTAGGATTTCTTCCTTTCCAAACACAACTGGATCTGGGGATGGAATGGCATTTGTTTTTGCACAGGACACTAGTCCTTCTCCACCTGATAGCTATGGCTCGTTGCTTGGACTCCTTGATAGATCAACTCAAGGTGGGGTGGTTAAACAAATGGCCATTGAGCTAGATACTTTCATGAACCAAGAATTTGATGATCCAGATGGGAACCACATTGCCATTGACACAACAAGCGTAATGAACCCAGTTGTGGCAAAGAGTCTCAACAGCACAGGAATTGACCTCAAGAGTGGAAGAGACATCAGATTCACAATTGGCTATGATGCTTGGAGTCAGATCCTCCAAGTTTCTGCTGGGTACACTGACATCCCAGCAACACTGATCAGCATCCTCAACCAATCAATTGACATGTCCAAAGTTGTCCCAAGATCAGTTTATGTTGGCTTCACCGCCTCCAGCGGGACCCTCCAAGAGACCCATCAAGTCCTTGATTGGGTTTTCACATCAGTGGAGTTACCAGGAATACCCTTAGGGCCTCCTGACAAAGATCATCACAGTAATATTAAGAACATATGGGCCGTTGATCTTCCTATTTTCTTGGGTGTGGCAATTTTGATAGCCTGCACTTACCCTTTGATTTTGAAAGTTGTGAAGAGAAATCATAGGGATGGAGAGGACATAGAAAGCCAGTCAAGAACAGCTGCAAATGCCCCGGAAATGTTCACTTACAAACAGCTTTTAATTGCCACTCAGAACTTCAGTAAGGAAAATCTGCTGGGTGCAGGTGCATTTGGAGTTGTTTACAAAGGCATCCTCTCATCACATCCTCCTAAAACTGTTGCTGTCAAGAAGATTTCAGCAACCTCCAAAAAAGGTGAAAGGGAGTACTTGGCAGAAATATGCACCATTGGGCGCTTAAGGCACAAGAACATAGTGCAACTCCAAGGCTGGTGCCACGAATACGACCATCGTTTCCTGGTCTACGAATACATGCCTAATGGAAGCCTCGAGCAATACATTGGAAAACCCTACCTTGATTGGAAAACAAGGTACAAGATCTTAACAGGATTGGCATCAGCATTACTATACCTCCACGAAGAGTGTGGCAACCCCGTGGTGCACAGAGACATTAAACCAAATAATGTGATGTTGGACTCCAATTTCAATGCTCATCTAGGCGATTTCGGGCTAGCTAGACTAATGTTCCAAGACTCATCAATTACAATCCCTTTGGCAGGAACTCCAGCGTACATAGCCCCGGAAGTACTAGGGTTATCCGCGAAAGCTACCCCAGAATCAGATGTCTATAGCTTTGGAATGGTGGTACTAGAAGTGGTATGTGGGAGAAGATCAAAAGGGTTCATGGACGATCACAGTTTAGTAGAACACGTTTGGAATTTGTACGCGAAAAATGCGTTGCTTGATTGCGTGGACCAAACGTTGGACGGAAAATATGAGGAGGAACAAGTAAAGAGGACCTTGATTGTAGGGCTTGCATGCTTGCACACATATTCCATACTAAGACCAAAGATAAGGAAGGTGGTGCAAATTTTTATGAACCCTAATGAGAAGCTATTCGAATTGCAGGATACGAGGCCGAGGCCGAGTGCAGTTTATTTATCAGTATCTTCTTCTGCTCCAACGACTGAATTTGGCTCTAGAAATGCTTCATACACTGCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

669

Amino Acids

73.86

Weight (kDa)

6.03

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 35 - 277 4.2e-41 Legume lectin domain
Lectin_L-type_dom PF18483 105 - 269 4.6e-13 Legume lectin beta-barrel domain
Pkinase PF00069 361 - 559 4.4e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 363 - 583 1.7e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29290
malus_domestica MD08G1148700.v1.1 MD08G1148800.v1.1 MD08G1212600.v1.1 MD15G1124000.v1.1
prunus_persica Prupe.1G479400_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298101
rosa_laevigata RLG00000011534
rosa_multiflora Rmu_sc0002800.1_g000004
rosa_rugosa Rorug06G0278900
rosa_samantha Rh6AG389000 Rh6BG397300 Rh6CG403200 Rh6DG389800
rosa_wichuraiana Rw6G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1094
Acc36I ACCTGC 1 cut(s) 1094
AccB1I GGYRCC 1 cut(s) 1272
AccB7I CCANNNNNTGG 1 cut(s) 1762
AccI GTMKAC 1 cut(s) 1302
AccII CGCG 2 cut(s) 1601, 1727
AciI CCGC 4 cut(s) 177, 771, 780, 1599
AclI AACGTT 1 cut(s) 1760
AclWI GGATC 3 cut(s) 364, 512, 652
AcoI YGGCCR 2 cut(s) 296, 477
AcsI RAATTY 4 cut(s) 509, 1717, 1869, 1970
AcuI CTGAAG 1 cut(s) 1063
AfaI GTAC 8 cut(s) 80, 680, 1208, 1373, 1571, 1587, 1647, 1724
AfiI CCNNNNNNNGG 5 cut(s) 571, 780, 814, 1556, 1762
AflII CTTAAG 1 cut(s) 1237
AflIII ACRYGT 2 cut(s) 729, 1708
AgsI TTSAA 3 cut(s) 196, 964, 1486
AhlI ACTAGT 1 cut(s) 395
AjnI CCWGG 3 cut(s) 293, 838, 1296
AleI CACNNNNGTG 1 cut(s) 827
AluBI AGCT 9 cut(s) 138, 417, 487, 1022, 1057, 1514, 1607, 1632, 1894
AluI AGCT 9 cut(s) 138, 417, 487, 1022, 1057, 1514, 1607, 1632, 1894
Alw21I GWGCWC 1 cut(s) 1443
Alw26I GTCTC 4 cut(s) 587, 612, 788, 1440
Alw44I GTGCAC 1 cut(s) 1439
AlwI GGATC 3 cut(s) 364, 512, 652
Ama87I CYCGRG 1 cut(s) 1328
AoxI GGCC 6 cut(s) 296, 477, 854, 897, 1916, 1922
ApaLI GTGCAC 1 cut(s) 1439
ApeKI GCWGC 2 cut(s) 63, 1022
ApoI RAATTY 4 cut(s) 509, 1717, 1869, 1970
Asp700I GAANNNNTTC 2 cut(s) 1895, 1987
AspLEI GCGC 1 cut(s) 1236
AspS9I GGNCC 5 cut(s) 783, 854, 897, 1753, 1797
AsuC2I CCSGG 3 cut(s) 284, 1034, 1580
AsuHPI GGTGA 6 cut(s) 161, 184, 269, 298, 760, 1208
AsuII TTCGAA 1 cut(s) 1899
AsuNHI GCTAGC 1 cut(s) 1510
AvaI CYCGRG 1 cut(s) 1328
AvaII GGWCC 3 cut(s) 783, 1753, 1797
AxyI CCTNAGG 1 cut(s) 850
BaeGI GKGCMC 1 cut(s) 1443
BalI TGGCCA 1 cut(s) 479
BanI GGYRCC 1 cut(s) 1272
BanII GRGCYC 1 cut(s) 170
Bbv12I GWGCWC 1 cut(s) 1443
BbvI GCAGC 2 cut(s) 75, 1009
BccI CCATC 5 cut(s) 359, 518, 807, 983, 1296
BceAI ACGGC 1 cut(s) 884
BciT130I CCWGG 3 cut(s) 295, 840, 1298
BciVI GTATCC 1 cut(s) 1903
BclI TGATCA 1 cut(s) 702
BcnI CCSGG 3 cut(s) 284, 1034, 1580
BcoDI GTCTC 4 cut(s) 587, 612, 788, 1440
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 9 cut(s) 228, 396, 488, 1496, 1511, 1515, 1589, 1649, 1980
BfmI CTRYAG 1 cut(s) 1627
BfoI RGCGCY 1 cut(s) 1237
BfrI CTTAAG 1 cut(s) 1237
BfuAI ACCTGC 1 cut(s) 1094
BfuI GTATCC 1 cut(s) 1903
BglI GCCNNNNNGGC 1 cut(s) 299
BglII AGATCT 1 cut(s) 1377
BisI GCNGC 2 cut(s) 64, 1023
BlsI GCNGC 2 cut(s) 65, 1024
BmcAI AGTACT 2 cut(s) 1208, 1587
Bme1390I CCNGG 6 cut(s) 284, 295, 840, 1034, 1298, 1580
Bme18I GGWCC 3 cut(s) 783, 1753, 1797
BmeT110I CYCGRG 1 cut(s) 1328
BmgT120I GGNCC 5 cut(s) 783, 854, 897, 1753, 1797
BmiI GGNNCC 5 cut(s) 6, 530, 784, 785, 1274
BmrFI CCNGG 6 cut(s) 284, 295, 840, 1034, 1298, 1580
BmrI ACTGGG 1 cut(s) 560
BmsI GCATC 4 cut(s) 634, 717, 1140, 1403
BmtI GCTAGC 1 cut(s) 1514
BmuI ACTGGG 1 cut(s) 560
BoxI GACNNNNGTC 1 cut(s) 396
BpmI CTGGAG 2 cut(s) 760, 1548
Bpu14I TTCGAA 1 cut(s) 1899
BpuEI CTTGAG 2 cut(s) 438, 590
BpuMI CCSGG 3 cut(s) 284, 1034, 1580
BsaBI GATNNNNATC 2 cut(s) 707, 1393
BsaI GGTCTC 1 cut(s) 788
BsaJI CCNNGG 5 cut(s) 1032, 1264, 1434, 1578, 1919
BsaXI ACNNNNNCTCC 4 cut(s) 112, 142, 1395, 1425
Bsc4I CCNNNNNNNGG 5 cut(s) 571, 780, 814, 1556, 1762
Bse118I RCCGGY 1 cut(s) 298
Bse1I ACTGG 3 cut(s) 358, 566, 1009
Bse21I CCTNAGG 1 cut(s) 850
Bse3DI GCAATG 1 cut(s) 534
Bse8I GATNNNNATC 2 cut(s) 707, 1393
BseBI CCWGG 3 cut(s) 295, 840, 1298
BseDI CCNNGG 5 cut(s) 1032, 1264, 1434, 1578, 1919
BseGI GGATG 7 cut(s) 233, 370, 687, 708, 994, 1131, 1144
BseJI GATNNNNATC 2 cut(s) 707, 1393
BseLI CCNNNNNNNGG 5 cut(s) 571, 780, 814, 1556, 1762
BseMI GCAATG 1 cut(s) 534
BseMII CTCAG 1 cut(s) 1085
BseNI ACTGG 3 cut(s) 358, 566, 1009
BseRI GAGGAG 2 cut(s) 120, 1793
BseSI GKGCMC 1 cut(s) 1443
BseXI GCAGC 2 cut(s) 75, 1009
BseYI CCCAGC 3 cut(s) 674, 691, 1096
BsgI GTGCAG 3 cut(s) 928, 1122, 1950
Bsh1236I CGCG 2 cut(s) 1601, 1727
BshFI GGCC 6 cut(s) 298, 479, 856, 899, 1918, 1924
BshNI GGYRCC 1 cut(s) 1272
BsiHKAI GWGCWC 1 cut(s) 1443
BsiHKCI CYCGRG 1 cut(s) 1328
BsiSI CCGG 4 cut(s) 284, 299, 1034, 1580
BslFI GGGAC 2 cut(s) 728, 796
BslI CCNNNNNNNGG 5 cut(s) 571, 780, 814, 1556, 1762
BsmAI GTCTC 4 cut(s) 587, 612, 788, 1440
BsmFI GGGAC 2 cut(s) 728, 796
BsnI GGCC 6 cut(s) 298, 479, 856, 899, 1918, 1924
Bso31I GGTCTC 1 cut(s) 788
BsoBI CYCGRG 1 cut(s) 1328
Bsp119I TTCGAA 1 cut(s) 1899
Bsp1286I GDGCHC 2 cut(s) 170, 1443
BspACI CCGC 4 cut(s) 177, 771, 780, 1599
BspANI GGCC 6 cut(s) 298, 479, 856, 899, 1918, 1924
BspCNI CTCAG 1 cut(s) 1084
BspFNI CGCG 2 cut(s) 1601, 1727
BspHI TCATGA 2 cut(s) 498, 2003
BspLI GGNNCC 5 cut(s) 6, 530, 784, 785, 1274
BspMI ACCTGC 1 cut(s) 1094
BspOI GCTAGC 1 cut(s) 1514
BspPI GGATC 3 cut(s) 364, 512, 652
BspT104I TTCGAA 1 cut(s) 1899
BspT107I GGYRCC 1 cut(s) 1272
BspTI CTTAAG 1 cut(s) 1237
BspTNI GGTCTC 1 cut(s) 788
BsrDI GCAATG 1 cut(s) 534
BsrFI RCCGGY 1 cut(s) 298
BsrI ACTGG 3 cut(s) 358, 566, 1009
BssAI RCCGGY 1 cut(s) 298
BssECI CCNNGG 5 cut(s) 1032, 1264, 1434, 1578, 1919
BssT1I CCWWGG 1 cut(s) 1264
Bst2UI CCWGG 3 cut(s) 295, 840, 1298
Bst4CI ACNGT 5 cut(s) 21, 325, 878, 1159, 1697
Bst6I CTCTTC 4 cut(s) 244, 610, 968, 1413
BstAFI CTTAAG 1 cut(s) 1237
BstBI TTCGAA 1 cut(s) 1899
BstC8I GCNNGC 6 cut(s) 300, 943, 1512, 1815, 1819, 1823
BstDEI CTNAG 3 cut(s) 850, 1071, 1841
BstDSI CCRYGG 1 cut(s) 1434
BstEII GGTNACC 2 cut(s) 149, 172
BstENI CCTNNNNNAGG 1 cut(s) 1554
BstF5I GGATG 7 cut(s) 233, 370, 687, 708, 994, 1131, 1144
BstFNI CGCG 2 cut(s) 1601, 1727
BstH2I RGCGCY 1 cut(s) 1237
BstHHI GCGC 1 cut(s) 1236
BstMAI GTCTC 4 cut(s) 587, 612, 788, 1440
BstMWI GCNNNNNNNGC 5 cut(s) 299, 1028, 1240, 1574, 1733
BstNI CCWGG 3 cut(s) 295, 840, 1298
BstNSI RCATGY 3 cut(s) 733, 1315, 1821
BstPAI GACNNNNGTC 1 cut(s) 396
BstPI GGTNACC 2 cut(s) 149, 172
BstSCI CCNGG 6 cut(s) 282, 293, 838, 1032, 1296, 1578
BstSFI CTRYAG 1 cut(s) 1627
BstSLI GKGCMC 1 cut(s) 1443
BstUI CGCG 2 cut(s) 1601, 1727
BstV1I GCAGC 2 cut(s) 75, 1009
BstX2I RGATCY 3 cut(s) 356, 657, 1377
BstYI RGATCY 3 cut(s) 356, 657, 1377
Bsu36I CCTNAGG 1 cut(s) 850
BsuI GTATCC 1 cut(s) 1903
BsuRI GGCC 6 cut(s) 298, 479, 856, 899, 1918, 1924
BtgI CCRYGG 1 cut(s) 1434
BtsCI GGATG 7 cut(s) 233, 370, 687, 708, 994, 1131, 1144
BtsI GCAGTG 1 cut(s) 1995
BtsIMutI CAGTG 4 cut(s) 681, 698, 834, 1995
BveI ACCTGC 1 cut(s) 1094
Cac8I GCNNGC 6 cut(s) 300, 943, 1512, 1815, 1819, 1823
CciI TCATGA 2 cut(s) 498, 2003
CfoI GCGC 1 cut(s) 1236
Cfr10I RCCGGY 1 cut(s) 298
Cfr13I GGNCC 5 cut(s) 783, 854, 897, 1753, 1797
Csp6I GTAC 8 cut(s) 79, 679, 1207, 1372, 1570, 1586, 1646, 1723
CviAII CATG 9 cut(s) 28, 85, 163, 499, 730, 1312, 1684, 1818, 2004
CviQI GTAC 8 cut(s) 79, 679, 1207, 1372, 1570, 1586, 1646, 1723
DdeI CTNAG 3 cut(s) 850, 1071, 1841
EaeI YGGCCR 2 cut(s) 296, 477
Eam1104I CTCTTC 4 cut(s) 244, 610, 968, 1413
EarI CTCTTC 4 cut(s) 244, 610, 968, 1413
Eco130I CCWWGG 1 cut(s) 1264
Eco24I GRGCYC 1 cut(s) 170
Eco31I GGTCTC 1 cut(s) 788
Eco47I GGWCC 3 cut(s) 783, 1753, 1797
Eco57I CTGAAG 1 cut(s) 1063
Eco81I CCTNAGG 1 cut(s) 850
Eco88I CYCGRG 1 cut(s) 1328
Eco91I GGTNACC 2 cut(s) 149, 172
EcoNI CCTNNNNNAGG 1 cut(s) 1554
EcoO109I RGGNCCY 3 cut(s) 783, 854, 1797
EcoO65I GGTNACC 2 cut(s) 149, 172
EcoRII CCWGG 3 cut(s) 293, 838, 1296
EcoT14I CCWWGG 1 cut(s) 1264
EcoT22I ATGCAT 1 cut(s) 164
EcoT38I GRGCYC 1 cut(s) 170
ErhI CCWWGG 1 cut(s) 1264
FaeI CATG 9 cut(s) 31, 88, 166, 502, 733, 1315, 1687, 1821, 2007
FalI AAGNNNNNCTT 2 cut(s) 1784, 1816
FaqI GGGAC 2 cut(s) 728, 796
FatI CATG 9 cut(s) 27, 84, 162, 498, 729, 1311, 1683, 1817, 2003
FauI CCCGC 1 cut(s) 773
FauNDI CATATG 1 cut(s) 893
FbaI TGATCA 1 cut(s) 702
FblI GTMKAC 1 cut(s) 1302
Fnu4HI GCNGC 2 cut(s) 64, 1023
FokI GGATG 7 cut(s) 220, 377, 674, 695, 1001, 1118, 1131
FriOI GRGCYC 1 cut(s) 170
Fsp4HI GCNGC 2 cut(s) 64, 1023
FspBI CTAG 9 cut(s) 228, 396, 488, 1496, 1511, 1515, 1589, 1649, 1980
GlaI GCGC 1 cut(s) 1235
GluI GCNGC 2 cut(s) 64, 1023
GsaI CCCAGC 3 cut(s) 678, 695, 1100
GsuI CTGGAG 2 cut(s) 760, 1548
HaeII RGCGCY 1 cut(s) 1237
HaeIII GGCC 6 cut(s) 298, 479, 856, 899, 1918, 1924
HapII CCGG 4 cut(s) 284, 299, 1034, 1580
HhaI GCGC 1 cut(s) 1236
Hin1II CATG 9 cut(s) 31, 88, 166, 502, 733, 1315, 1687, 1821, 2007
Hin6I GCGC 1 cut(s) 1234
HinP1I GCGC 1 cut(s) 1234
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HinfI GANTC 7 cut(s) 435, 580, 627, 652, 1475, 1532, 1616
HpaI GTTAAC 1 cut(s) 24
HpaII CCGG 4 cut(s) 284, 299, 1034, 1580
HphI GGTGA 6 cut(s) 161, 184, 269, 298, 760, 1208
Hpy166II GTNNAC 8 cut(s) 24, 79, 681, 1044, 1123, 1303, 1441, 1753
Hpy188I TCNGA 4 cut(s) 626, 657, 1074, 1621
Hpy188III TCNNGA 8 cut(s) 499, 521, 607, 860, 1014, 1168, 1980, 2004
Hpy8I GTNNAC 8 cut(s) 24, 79, 681, 1044, 1123, 1303, 1441, 1753
HpyAV CCTTC 5 cut(s) 124, 133, 258, 411, 1852
HpyCH4III ACNGT 5 cut(s) 21, 325, 878, 1159, 1697
HpyCH4IV ACGT 2 cut(s) 1710, 1760
HpyF10VI GCNNNNNNNGC 5 cut(s) 299, 1028, 1240, 1574, 1733
HpyF3I CTNAG 3 cut(s) 850, 1071, 1841
HpySE526I ACGT 2 cut(s) 1710, 1760
Hsp92II CATG 9 cut(s) 31, 88, 166, 502, 733, 1315, 1687, 1821, 2007
HspAI GCGC 1 cut(s) 1234
KflI GGGWCCC 1 cut(s) 783
KroI GCCGGC 1 cut(s) 298
KroNI GCCGGC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 702
KspAI GTTAAC 1 cut(s) 24
LmnI GCTCC 2 cut(s) 10, 1963
Lsp1109I GCAGC 2 cut(s) 75, 1009
LweI GCATC 4 cut(s) 634, 717, 1140, 1403
MaeI CTAG 9 cut(s) 228, 396, 488, 1496, 1511, 1515, 1589, 1649, 1980
MaeII ACGT 2 cut(s) 1710, 1760
MaeIII GTNAC 4 cut(s) 140, 149, 172, 834
MfeI CAATTG 3 cut(s) 248, 633, 723
MflI RGATCY 3 cut(s) 356, 657, 1377
MhlI GDGCHC 2 cut(s) 170, 1443
MlsI TGGCCA 1 cut(s) 479
MluNI TGGCCA 1 cut(s) 479
MlyI GAGTC 5 cut(s) 429, 589, 661, 1469, 1526
MmeI TCCRAC 4 cut(s) 241, 1452, 1743, 1985
Mox20I TGGCCA 1 cut(s) 479
Mph1103I ATGCAT 1 cut(s) 164
MroNI GCCGGC 1 cut(s) 298
MroXI GAANNNNTTC 2 cut(s) 1895, 1987
MscI TGGCCA 1 cut(s) 479
MseI TTAA 7 cut(s) 23, 468, 885, 1061, 1238, 1382, 1452
MslI CAYNNNNRTG 2 cut(s) 827, 987
Msp20I TGGCCA 1 cut(s) 479
MspA1I CMGCKG 2 cut(s) 780, 1022
MspCI CTTAAG 1 cut(s) 1237
MspI CCGG 4 cut(s) 284, 299, 1034, 1580
MspR9I CCNGG 6 cut(s) 284, 295, 840, 1034, 1298, 1580
MunI CAATTG 3 cut(s) 248, 633, 723
MvaI CCWGG 3 cut(s) 295, 840, 1298
MvnI CGCG 2 cut(s) 1601, 1727
MwoI GCNNNNNNNGC 5 cut(s) 299, 1028, 1240, 1574, 1733
NaeI GCCGGC 1 cut(s) 300
NciI CCSGG 3 cut(s) 284, 1034, 1580
NdeI CATATG 1 cut(s) 893
NgoMIV GCCGGC 1 cut(s) 298
NheI GCTAGC 1 cut(s) 1510
NlaIII CATG 9 cut(s) 31, 88, 166, 502, 733, 1315, 1687, 1821, 2007
NlaIV GGNNCC 5 cut(s) 6, 530, 784, 785, 1274
NmeAIII GCCGAG 2 cut(s) 1944, 1950
NmuCI GTSAC 2 cut(s) 149, 172
NsiI ATGCAT 1 cut(s) 164
NspI RCATGY 3 cut(s) 733, 1315, 1821
NspV TTCGAA 1 cut(s) 1899
OliI CACNNNNGTG 1 cut(s) 827
PaeI GCATGC 1 cut(s) 1821
PaeR7I CTCGAG 1 cut(s) 1328
PagI TCATGA 2 cut(s) 498, 2003
PaqCI CACCTGC 1 cut(s) 1094
PciI ACATGT 1 cut(s) 729
PdiI GCCGGC 1 cut(s) 300
PdmI GAANNNNTTC 2 cut(s) 1895, 1987
PfeI GAWTC 2 cut(s) 627, 1616
PflMI CCANNNNNTGG 1 cut(s) 1762
PkrI GCNGC 2 cut(s) 65, 1024
PleI GAGTC 5 cut(s) 429, 588, 660, 1469, 1526
PpsI GAGTC 5 cut(s) 429, 588, 660, 1469, 1526
PpuMI RGGWCCY 2 cut(s) 783, 1797
PscI ACATGT 1 cut(s) 729
PshAI GACNNNNGTC 1 cut(s) 396
Psp1406I AACGTT 1 cut(s) 1760
Psp5II RGGWCCY 2 cut(s) 783, 1797
Psp6I CCWGG 3 cut(s) 293, 838, 1296
PspEI GGTNACC 2 cut(s) 149, 172
PspFI CCCAGC 3 cut(s) 674, 691, 1096
PspGI CCWGG 3 cut(s) 293, 838, 1296
PspN4I GGNNCC 5 cut(s) 6, 530, 784, 785, 1274
PspPI GGNCC 5 cut(s) 783, 854, 897, 1753, 1797
PspPPI RGGWCCY 2 cut(s) 783, 1797
PspXI VCTCGAGB 1 cut(s) 1328
PsuI RGATCY 3 cut(s) 356, 657, 1377
PvuII CAGCTG 1 cut(s) 1022
RsaI GTAC 8 cut(s) 80, 680, 1208, 1373, 1571, 1587, 1647, 1724
RsaNI GTAC 8 cut(s) 79, 679, 1207, 1372, 1570, 1586, 1646, 1723
RseI CAYNNNNRTG 2 cut(s) 827, 987
SaqAI TTAA 7 cut(s) 23, 468, 885, 1061, 1238, 1382, 1452
SatI GCNGC 2 cut(s) 64, 1023
Sau96I GGNCC 5 cut(s) 783, 854, 897, 1753, 1797
ScaI AGTACT 2 cut(s) 1208, 1587
SchI GAGTC 5 cut(s) 429, 589, 661, 1469, 1526
ScrFI CCNGG 6 cut(s) 284, 295, 840, 1034, 1298, 1580
SduI GDGCHC 2 cut(s) 170, 1443
SfaNI GCATC 4 cut(s) 634, 717, 1140, 1403
SfcI CTRYAG 1 cut(s) 1627
Sfr274I CTCGAG 1 cut(s) 1328
SfuI TTCGAA 1 cut(s) 1899
SinI GGWCC 3 cut(s) 783, 1753, 1797
SlaI CTCGAG 1 cut(s) 1328
SmiMI CAYNNNNRTG 2 cut(s) 827, 987
SmlI CTYRAG 4 cut(s) 453, 605, 1237, 1328
SmoI CTYRAG 4 cut(s) 453, 605, 1237, 1328
SpeI ACTAGT 1 cut(s) 395
SphI GCATGC 1 cut(s) 1821
SsiI CCGC 4 cut(s) 177, 771, 780, 1599
SspI AATATT 1 cut(s) 883
SspMI CTAG 9 cut(s) 228, 396, 488, 1496, 1511, 1515, 1589, 1649, 1980
StyD4I CCNGG 6 cut(s) 282, 293, 838, 1032, 1296, 1578
StyI CCWWGG 1 cut(s) 1264
TaaI ACNGT 5 cut(s) 21, 325, 878, 1159, 1697
TaiI ACGT 2 cut(s) 1713, 1763
TaqI TCGA 2 cut(s) 1329, 1899
TatI WGTACW 3 cut(s) 78, 1206, 1585
TfiI GAWTC 2 cut(s) 627, 1616
Tru1I TTAA 7 cut(s) 23, 468, 885, 1061, 1238, 1382, 1452
Tru9I TTAA 7 cut(s) 23, 468, 885, 1061, 1238, 1382, 1452
TscAI CASTG 4 cut(s) 688, 705, 834, 2002
TseFI GTSAC 2 cut(s) 149, 172
TseI GCWGC 2 cut(s) 63, 1022
Tsp45I GTSAC 2 cut(s) 149, 172
TspDTI ATGAA 8 cut(s) 101, 222, 487, 515, 575, 1672, 1892, 1980
TspGWI ACGGA 1 cut(s) 1782
TspRI CASTG 4 cut(s) 688, 705, 834, 2002
Van91I CCANNNNNTGG 1 cut(s) 1762
Vha464I CTTAAG 1 cut(s) 1237
VneI GTGCAC 1 cut(s) 1439
VpaK11BI GGWCC 3 cut(s) 783, 1753, 1797
XagI CCTNNNNNAGG 1 cut(s) 1554
XapI RAATTY 4 cut(s) 509, 1717, 1869, 1970
XbaI TCTAGA 1 cut(s) 1979
XceI RCATGY 3 cut(s) 733, 1315, 1821
XcmI CCANNNNNNNNNTGG 2 cut(s) 671, 1421
XhoI CTCGAG 1 cut(s) 1328
XmiI GTMKAC 1 cut(s) 1302
XmnI GAANNNNTTC 2 cut(s) 1895, 1987
XspI CTAG 9 cut(s) 228, 396, 488, 1496, 1511, 1515, 1589, 1649, 1980
ZrmI AGTACT 2 cut(s) 1208, 1587
Zsp2I ATGCAT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.