tetratricopeptide repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27460 AT1G27460 AT1G27460 |
| fragaria_vesca | FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 |
| malus_domestica | MD15G1069300.v1.1 |
| prunus_persica | Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1 |
| pyrus_communis | pycom08g06750 pycom15g06540 |
| rosa_chinensis | RchiOBHm_Chr6g0309631 |
| rosa_laevigata | RLG00000010548 |
| rosa_multiflora | Rmu_co8186100.1_g000001 Rmu_sc0007632.1_g000005 Rmu_sc0008462.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00159270 |
| rosa_rugosa | Rorug06G0373200 Rorug06G0373300 |
| rosa_samantha | Rh6AG486900 Rh6BG496500 Rh6CG501200 Rh6DG487400 |
| rosa_wichuraiana | Rw6G042410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 333 |
| AccBSI | CCGCTC | 1 cut(s) | 2132 |
| AccII | CGCG | 2 cut(s) | 346, 1150 |
| AciI | CCGC | 8 cut(s) | 44, 47, 344, 640, 1230, 1565, 2014, 2130 |
| AclWI | GGATC | 7 cut(s) | 851, 864, 879, 1322, 1335, 1682, 1981 |
| AcoI | YGGCCR | 2 cut(s) | 66, 306 |
| AcsI | RAATTY | 8 cut(s) | 32, 134, 244, 664, 1142, 1648, 1711, 2096 |
| AcuI | CTGAAG | 4 cut(s) | 245, 1515, 1614, 2105 |
| AfaI | GTAC | 5 cut(s) | 953, 974, 1409, 1613, 1969 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 117, 219, 304, 811, 945, 1059, 1371, 1830 |
| AjnI | CCWGG | 6 cut(s) | 71, 526, 779, 943, 1727, 2103 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1921, 1953 |
| Alw26I | GTCTC | 1 cut(s) | 1728 |
| AlwI | GGATC | 7 cut(s) | 851, 864, 879, 1322, 1335, 1682, 1981 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 999 |
| Ama87I | CYCGRG | 1 cut(s) | 674 |
| AoxI | GGCC | 8 cut(s) | 66, 91, 210, 306, 312, 936, 1351, 1769 |
| ApeKI | GCWGC | 9 cut(s) | 254, 467, 1235, 1307, 1385, 1428, 2083, 2090, 2108 |
| ApoI | RAATTY | 8 cut(s) | 32, 134, 244, 664, 1142, 1648, 1711, 2096 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 564 |
| AspLEI | GCGC | 1 cut(s) | 889 |
| AspS9I | GGNCC | 5 cut(s) | 105, 210, 600, 670, 767 |
| AsuC2I | CCSGG | 1 cut(s) | 644 |
| AsuHPI | GGTGA | 2 cut(s) | 551, 826 |
| AsuNHI | GCTAGC | 1 cut(s) | 1624 |
| AvaI | CYCGRG | 1 cut(s) | 674 |
| AvaII | GGWCC | 4 cut(s) | 105, 600, 670, 767 |
| AxyI | CCTNAGG | 1 cut(s) | 1692 |
| BalI | TGGCCA | 2 cut(s) | 68, 308 |
| BamHI | GGATCC | 2 cut(s) | 856, 1327 |
| BanI | GGYRCC | 1 cut(s) | 333 |
| BanII | GRGCYC | 2 cut(s) | 131, 649 |
| BbvI | GCAGC | 9 cut(s) | 241, 454, 1247, 1294, 1397, 1440, 2095, 2095, 2102 |
| BccI | CCATC | 1 cut(s) | 963 |
| BceAI | ACGGC | 1 cut(s) | 1349 |
| BciT130I | CCWGG | 6 cut(s) | 73, 528, 781, 945, 1729, 2105 |
| BclI | TGATCA | 2 cut(s) | 651, 1174 |
| BcnI | CCSGG | 1 cut(s) | 644 |
| BcoDI | GTCTC | 1 cut(s) | 1728 |
| BfaI | CTAG | 4 cut(s) | 207, 1112, 1379, 1625 |
| BfmI | CTRYAG | 3 cut(s) | 1225, 1470, 1944 |
| BmcAI | AGTACT | 1 cut(s) | 1409 |
| Bme1390I | CCNGG | 7 cut(s) | 73, 528, 644, 781, 945, 1729, 2105 |
| Bme18I | GGWCC | 4 cut(s) | 105, 600, 670, 767 |
| BmeT110I | CYCGRG | 1 cut(s) | 674 |
| BmgT120I | GGNCC | 5 cut(s) | 105, 210, 600, 670, 767 |
| BmiI | GGNNCC | 5 cut(s) | 335, 672, 768, 858, 1329 |
| BmrFI | CCNGG | 7 cut(s) | 73, 528, 644, 781, 945, 1729, 2105 |
| BmrI | ACTGGG | 1 cut(s) | 458 |
| BmsI | GCATC | 5 cut(s) | 241, 1372, 1480, 1765, 1941 |
| BmtI | GCTAGC | 1 cut(s) | 1628 |
| BmuI | ACTGGG | 1 cut(s) | 458 |
| BpmI | CTGGAG | 2 cut(s) | 549, 1750 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1581 |
| BpuEI | CTTGAG | 4 cut(s) | 248, 410, 599, 1856 |
| BpuMI | CCSGG | 1 cut(s) | 644 |
| BsaJI | CCNNGG | 7 cut(s) | 72, 309, 603, 659, 779, 944, 2050 |
| BsaWI | WCCGGW | 4 cut(s) | 110, 336, 899, 2134 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 117, 219, 304, 811, 945, 1059, 1371, 1830 |
| Bse1I | ACTGG | 3 cut(s) | 69, 453, 1975 |
| Bse21I | CCTNAGG | 1 cut(s) | 1692 |
| Bse3DI | GCAATG | 1 cut(s) | 509 |
| BseBI | CCWGG | 6 cut(s) | 73, 528, 781, 945, 1729, 2105 |
| BseDI | CCNNGG | 7 cut(s) | 72, 309, 603, 659, 779, 944, 2050 |
| BseGI | GGATG | 1 cut(s) | 1588 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 117, 219, 304, 811, 945, 1059, 1371, 1830 |
| BseMI | GCAATG | 1 cut(s) | 509 |
| BseNI | ACTGG | 3 cut(s) | 69, 453, 1975 |
| BseXI | GCAGC | 9 cut(s) | 241, 454, 1247, 1294, 1397, 1440, 2095, 2095, 2102 |
| BsgI | GTGCAG | 2 cut(s) | 713, 1254 |
| Bsh1236I | CGCG | 2 cut(s) | 346, 1150 |
| Bsh1285I | CGRYCG | 1 cut(s) | 958 |
| BshFI | GGCC | 8 cut(s) | 68, 93, 212, 308, 314, 938, 1353, 1771 |
| BshNI | GGYRCC | 1 cut(s) | 333 |
| BsiEI | CGRYCG | 1 cut(s) | 958 |
| BsiHKCI | CYCGRG | 1 cut(s) | 674 |
| BsiSI | CCGG | 6 cut(s) | 56, 111, 337, 643, 900, 2135 |
| BslFI | GGGAC | 3 cut(s) | 89, 134, 1910 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 117, 219, 304, 811, 945, 1059, 1371, 1830 |
| BsmAI | GTCTC | 1 cut(s) | 1728 |
| BsmFI | GGGAC | 3 cut(s) | 89, 134, 1910 |
| BsmI | GAATGC | 4 cut(s) | 391, 482, 528, 2011 |
| BsnI | GGCC | 8 cut(s) | 68, 93, 212, 308, 314, 938, 1353, 1771 |
| BsoBI | CYCGRG | 1 cut(s) | 674 |
| Bsp1286I | GDGCHC | 2 cut(s) | 131, 649 |
| Bsp143I | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| Bsp19I | CCATGG | 1 cut(s) | 659 |
| BspACI | CCGC | 8 cut(s) | 44, 47, 344, 640, 1230, 1565, 2014, 2130 |
| BspANI | GGCC | 8 cut(s) | 68, 93, 212, 308, 314, 938, 1353, 1771 |
| BspFNI | CGCG | 2 cut(s) | 346, 1150 |
| BspHI | TCATGA | 1 cut(s) | 1129 |
| BspLI | GGNNCC | 5 cut(s) | 335, 672, 768, 858, 1329 |
| BspMAI | CTGCAG | 2 cut(s) | 1474, 1948 |
| BspOI | GCTAGC | 1 cut(s) | 1628 |
| BspPI | GGATC | 7 cut(s) | 851, 864, 879, 1322, 1335, 1682, 1981 |
| BspQI | GCTCTTC | 2 cut(s) | 33, 264 |
| BspT107I | GGYRCC | 1 cut(s) | 333 |
| BsrBI | CCGCTC | 1 cut(s) | 2132 |
| BsrDI | GCAATG | 1 cut(s) | 509 |
| BsrI | ACTGG | 3 cut(s) | 69, 453, 1975 |
| BssECI | CCNNGG | 7 cut(s) | 72, 309, 603, 659, 779, 944, 2050 |
| BssMI | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| BssT1I | CCWWGG | 3 cut(s) | 309, 603, 659 |
| Bst2UI | CCWGG | 6 cut(s) | 73, 528, 781, 945, 1729, 2105 |
| Bst4CI | ACNGT | 6 cut(s) | 499, 548, 906, 956, 995, 1270 |
| Bst6I | CTCTTC | 3 cut(s) | 33, 264, 1528 |
| BstDSI | CCRYGG | 1 cut(s) | 659 |
| BstF5I | GGATG | 1 cut(s) | 1588 |
| BstFNI | CGCG | 2 cut(s) | 346, 1150 |
| BstHHI | GCGC | 1 cut(s) | 889 |
| BstKTI | GATC | 9 cut(s) | 437, 654, 859, 874, 1177, 1330, 1540, 1690, 1976 |
| BstMAI | GTCTC | 1 cut(s) | 1728 |
| BstMBI | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| BstMCI | CGRYCG | 1 cut(s) | 958 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 52, 632, 1241 |
| BstNI | CCWGG | 6 cut(s) | 73, 528, 781, 945, 1729, 2105 |
| BstNSI | RCATGY | 1 cut(s) | 2115 |
| BstSCI | CCNGG | 7 cut(s) | 71, 526, 642, 779, 943, 1727, 2103 |
| BstSFI | CTRYAG | 3 cut(s) | 1225, 1470, 1944 |
| BstUI | CGCG | 2 cut(s) | 346, 1150 |
| BstV1I | GCAGC | 9 cut(s) | 241, 454, 1247, 1294, 1397, 1440, 2095, 2095, 2102 |
| BstX2I | RGATCY | 2 cut(s) | 856, 1327 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 597 |
| BstYI | RGATCY | 2 cut(s) | 856, 1327 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1692 |
| BsuRI | GGCC | 8 cut(s) | 68, 93, 212, 308, 314, 938, 1353, 1771 |
| BtgI | CCRYGG | 1 cut(s) | 659 |
| BtsCI | GGATG | 1 cut(s) | 1588 |
| BtsIMutI | CAGTG | 5 cut(s) | 62, 408, 1000, 1177, 1184 |
| CaiI | CAGNNNCTG | 1 cut(s) | 999 |
| CciI | TCATGA | 1 cut(s) | 1129 |
| CfoI | GCGC | 1 cut(s) | 889 |
| Cfr13I | GGNCC | 5 cut(s) | 105, 210, 600, 670, 767 |
| CseI | GACGC | 1 cut(s) | 1233 |
| Csp6I | GTAC | 5 cut(s) | 952, 973, 1408, 1612, 1968 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 735, 770, 833, 868 |
| CviAII | CATG | 7 cut(s) | 660, 1124, 1130, 1192, 1304, 2033, 2112 |
| CviQI | GTAC | 5 cut(s) | 952, 973, 1408, 1612, 1968 |
| DpnI | GATC | 9 cut(s) | 436, 653, 858, 873, 1176, 1329, 1539, 1689, 1975 |
| DpnII | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| EaeI | YGGCCR | 2 cut(s) | 66, 306 |
| Eam1104I | CTCTTC | 3 cut(s) | 33, 264, 1528 |
| EarI | CTCTTC | 3 cut(s) | 33, 264, 1528 |
| Eco130I | CCWWGG | 3 cut(s) | 309, 603, 659 |
| Eco24I | GRGCYC | 2 cut(s) | 131, 649 |
| Eco32I | GATATC | 1 cut(s) | 614 |
| Eco47I | GGWCC | 4 cut(s) | 105, 600, 670, 767 |
| Eco57I | CTGAAG | 4 cut(s) | 245, 1515, 1614, 2105 |
| Eco81I | CCTNAGG | 1 cut(s) | 1692 |
| Eco88I | CYCGRG | 1 cut(s) | 674 |
| EcoO109I | RGGNCCY | 1 cut(s) | 210 |
| EcoRI | GAATTC | 1 cut(s) | 1648 |
| EcoRII | CCWGG | 6 cut(s) | 71, 526, 779, 943, 1727, 2103 |
| EcoRV | GATATC | 1 cut(s) | 614 |
| EcoT14I | CCWWGG | 3 cut(s) | 309, 603, 659 |
| EcoT38I | GRGCYC | 2 cut(s) | 131, 649 |
| ErhI | CCWWGG | 3 cut(s) | 309, 603, 659 |
| FaeI | CATG | 7 cut(s) | 663, 1127, 1133, 1195, 1307, 2036, 2115 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 474, 506, 691, 723, 726, 758, 1554, 1586 |
| FaqI | GGGAC | 3 cut(s) | 89, 134, 1910 |
| FatI | CATG | 7 cut(s) | 659, 1123, 1129, 1191, 1303, 2032, 2111 |
| FbaI | TGATCA | 2 cut(s) | 651, 1174 |
| FokI | GGATG | 1 cut(s) | 1575 |
| FriOI | GRGCYC | 2 cut(s) | 131, 649 |
| FspBI | CTAG | 4 cut(s) | 207, 1112, 1379, 1625 |
| GlaI | GCGC | 1 cut(s) | 888 |
| GsuI | CTGGAG | 2 cut(s) | 549, 1750 |
| HaeIII | GGCC | 8 cut(s) | 68, 93, 212, 308, 314, 938, 1353, 1771 |
| HapII | CCGG | 6 cut(s) | 56, 111, 337, 643, 900, 2135 |
| HgaI | GACGC | 1 cut(s) | 1233 |
| HhaI | GCGC | 1 cut(s) | 889 |
| Hin1II | CATG | 7 cut(s) | 663, 1127, 1133, 1195, 1307, 2036, 2115 |
| Hin6I | GCGC | 1 cut(s) | 887 |
| HinP1I | GCGC | 1 cut(s) | 887 |
| HindIII | AAGCTT | 2 cut(s) | 1993, 2143 |
| HinfI | GANTC | 8 cut(s) | 59, 164, 370, 1256, 1283, 1375, 1482, 1523 |
| HpaII | CCGG | 6 cut(s) | 56, 111, 337, 643, 900, 2135 |
| HphI | GGTGA | 2 cut(s) | 551, 826 |
| Hpy166II | GTNNAC | 2 cut(s) | 168, 1004 |
| Hpy188I | TCNGA | 9 cut(s) | 651, 879, 1054, 1255, 1261, 1278, 1414, 1556, 2054 |
| Hpy8I | GTNNAC | 2 cut(s) | 168, 1004 |
| HpyAV | CCTTC | 6 cut(s) | 447, 752, 1127, 1315, 1850, 2066 |
| HpyCH4III | ACNGT | 6 cut(s) | 499, 548, 906, 956, 995, 1270 |
| HpyCH4IV | ACGT | 1 cut(s) | 1610 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 52, 632, 1241 |
| HpySE526I | ACGT | 1 cut(s) | 1610 |
| Hsp92II | CATG | 7 cut(s) | 663, 1127, 1133, 1195, 1307, 2036, 2115 |
| HspAI | GCGC | 1 cut(s) | 887 |
| Ksp22I | TGATCA | 2 cut(s) | 651, 1174 |
| Kzo9I | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| LguI | GCTCTTC | 2 cut(s) | 33, 264 |
| LmnI | GCTCC | 3 cut(s) | 591, 1094, 2137 |
| Lsp1109I | GCAGC | 9 cut(s) | 241, 454, 1247, 1294, 1397, 1440, 2095, 2095, 2102 |
| LweI | GCATC | 5 cut(s) | 241, 1372, 1480, 1765, 1941 |
| MaeI | CTAG | 4 cut(s) | 207, 1112, 1379, 1625 |
| MaeII | ACGT | 1 cut(s) | 1610 |
| MaeIII | GTNAC | 3 cut(s) | 60, 895, 989 |
| MalI | GATC | 9 cut(s) | 436, 653, 858, 873, 1176, 1329, 1539, 1689, 1975 |
| MbiI | CCGCTC | 1 cut(s) | 2132 |
| MboI | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| MboII | GAAGA | 8 cut(s) | 50, 90, 251, 632, 806, 1025, 1542, 1545 |
| MfeI | CAATTG | 1 cut(s) | 752 |
| MflI | RGATCY | 2 cut(s) | 856, 1327 |
| MhlI | GDGCHC | 2 cut(s) | 131, 649 |
| MlsI | TGGCCA | 2 cut(s) | 68, 308 |
| MluNI | TGGCCA | 2 cut(s) | 68, 308 |
| MlyI | GAGTC | 3 cut(s) | 68, 173, 1292 |
| MmeI | TCCRAC | 1 cut(s) | 794 |
| Mox20I | TGGCCA | 2 cut(s) | 68, 308 |
| MroXI | GAANNNNTTC | 1 cut(s) | 564 |
| MscI | TGGCCA | 2 cut(s) | 68, 308 |
| MseI | TTAA | 4 cut(s) | 293, 1314, 1761, 2000 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1128 |
| Msp20I | TGGCCA | 2 cut(s) | 68, 308 |
| MspI | CCGG | 6 cut(s) | 56, 111, 337, 643, 900, 2135 |
| MspR9I | CCNGG | 7 cut(s) | 73, 528, 644, 781, 945, 1729, 2105 |
| MunI | CAATTG | 1 cut(s) | 752 |
| Mva1269I | GAATGC | 4 cut(s) | 391, 482, 528, 2011 |
| MvaI | CCWGG | 6 cut(s) | 73, 528, 781, 945, 1729, 2105 |
| MvnI | CGCG | 2 cut(s) | 346, 1150 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 52, 632, 1241 |
| NciI | CCSGG | 1 cut(s) | 644 |
| NcoI | CCATGG | 1 cut(s) | 659 |
| NdeII | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| NheI | GCTAGC | 1 cut(s) | 1624 |
| NlaIII | CATG | 7 cut(s) | 663, 1127, 1133, 1195, 1307, 2036, 2115 |
| NlaIV | GGNNCC | 5 cut(s) | 335, 672, 768, 858, 1329 |
| NmeAIII | GCCGAG | 1 cut(s) | 62 |
| NmuCI | GTSAC | 1 cut(s) | 60 |
| NspI | RCATGY | 1 cut(s) | 2115 |
| PagI | TCATGA | 1 cut(s) | 1129 |
| PciSI | GCTCTTC | 2 cut(s) | 33, 264 |
| PctI | GAATGC | 4 cut(s) | 391, 482, 528, 2011 |
| PdmI | GAANNNNTTC | 1 cut(s) | 564 |
| PfeI | GAWTC | 5 cut(s) | 370, 1256, 1375, 1482, 1523 |
| PleI | GAGTC | 3 cut(s) | 67, 172, 1291 |
| PpsI | GAGTC | 3 cut(s) | 67, 172, 1291 |
| Psp6I | CCWGG | 6 cut(s) | 71, 526, 779, 943, 1727, 2103 |
| PspGI | CCWGG | 6 cut(s) | 71, 526, 779, 943, 1727, 2103 |
| PspN4I | GGNNCC | 5 cut(s) | 335, 672, 768, 858, 1329 |
| PspPI | GGNCC | 5 cut(s) | 105, 210, 600, 670, 767 |
| PstI | CTGCAG | 2 cut(s) | 1474, 1948 |
| PstNI | CAGNNNCTG | 1 cut(s) | 999 |
| PsuI | RGATCY | 2 cut(s) | 856, 1327 |
| RsaI | GTAC | 5 cut(s) | 953, 974, 1409, 1613, 1969 |
| RsaNI | GTAC | 5 cut(s) | 952, 973, 1408, 1612, 1968 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1128 |
| SapI | GCTCTTC | 2 cut(s) | 33, 264 |
| SaqAI | TTAA | 4 cut(s) | 293, 1314, 1761, 2000 |
| Sau3AI | GATC | 9 cut(s) | 434, 651, 856, 871, 1174, 1327, 1537, 1687, 1973 |
| Sau96I | GGNCC | 5 cut(s) | 105, 210, 600, 670, 767 |
| ScaI | AGTACT | 1 cut(s) | 1409 |
| SchI | GAGTC | 3 cut(s) | 68, 173, 1292 |
| ScrFI | CCNGG | 7 cut(s) | 73, 528, 644, 781, 945, 1729, 2105 |
| SduI | GDGCHC | 2 cut(s) | 131, 649 |
| SfaNI | GCATC | 5 cut(s) | 241, 1372, 1480, 1765, 1941 |
| SfcI | CTRYAG | 3 cut(s) | 1225, 1470, 1944 |
| SinI | GGWCC | 4 cut(s) | 105, 600, 670, 767 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1128 |
| SmlI | CTYRAG | 4 cut(s) | 227, 425, 578, 1871 |
| SmoI | CTYRAG | 4 cut(s) | 227, 425, 578, 1871 |
| SsiI | CCGC | 8 cut(s) | 44, 47, 344, 640, 1230, 1565, 2014, 2130 |
| SspI | AATATT | 1 cut(s) | 594 |
| SspMI | CTAG | 4 cut(s) | 207, 1112, 1379, 1625 |
| StyD4I | CCNGG | 7 cut(s) | 71, 526, 642, 779, 943, 1727, 2103 |
| StyI | CCWWGG | 3 cut(s) | 309, 603, 659 |
| TaaI | ACNGT | 6 cut(s) | 499, 548, 906, 956, 995, 1270 |
| TaiI | ACGT | 1 cut(s) | 1613 |
| TaqI | TCGA | 6 cut(s) | 101, 131, 279, 321, 930, 958 |
| TatI | WGTACW | 1 cut(s) | 1407 |
| TauI | GCSGC | 2 cut(s) | 46, 49 |
| TfiI | GAWTC | 5 cut(s) | 370, 1256, 1375, 1482, 1523 |
| Tru1I | TTAA | 4 cut(s) | 293, 1314, 1761, 2000 |
| Tru9I | TTAA | 4 cut(s) | 293, 1314, 1761, 2000 |
| TscAI | CASTG | 5 cut(s) | 69, 415, 1000, 1177, 1184 |
| TseFI | GTSAC | 1 cut(s) | 60 |
| TseI | GCWGC | 9 cut(s) | 254, 467, 1235, 1307, 1385, 1428, 2083, 2090, 2108 |
| Tsp45I | GTSAC | 1 cut(s) | 60 |
| TspDTI | ATGAA | 7 cut(s) | 839, 1026, 1146, 1180, 1418, 1973, 2018 |
| TspRI | CASTG | 5 cut(s) | 69, 415, 1000, 1177, 1184 |
| VpaK11BI | GGWCC | 4 cut(s) | 105, 600, 670, 767 |
| XapI | RAATTY | 8 cut(s) | 32, 134, 244, 664, 1142, 1648, 1711, 2096 |
| XbaI | TCTAGA | 1 cut(s) | 1378 |
| XceI | RCATGY | 1 cut(s) | 2115 |
| XmnI | GAANNNNTTC | 1 cut(s) | 564 |
| XspI | CTAG | 4 cut(s) | 207, 1112, 1379, 1625 |
| ZrmI | AGTACT | 1 cut(s) | 1409 |