tetratricopeptide repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27460 AT1G27460 AT1G27460 |
| fragaria_vesca | FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 |
| malus_domestica | MD15G1069300.v1.1 |
| prunus_persica | Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1 |
| pyrus_communis | pycom08g06750 pycom15g06540 |
| rosa_chinensis | RchiOBHm_Chr6g0309631 |
| rosa_laevigata | RLG00000010548 |
| rosa_multiflora | Rmu_co8186100.1_g000001 Rmu_sc0007632.1_g000005 Rmu_sc0008462.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00159270 |
| rosa_rugosa | Rorug06G0373200 Rorug06G0373300 |
| rosa_samantha | Rh6AG486900 Rh6BG496500 Rh6CG501200 Rh6DG487400 |
| rosa_wichuraiana | Rw6G042410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 333 |
| AccII | CGCG | 2 cut(s) | 346, 1150 |
| AciI | CCGC | 3 cut(s) | 344, 1230, 1565 |
| AclWI | GGATC | 5 cut(s) | 879, 1203, 1322, 1335, 1682 |
| AcoI | YGGCCR | 1 cut(s) | 306 |
| AcsI | RAATTY | 7 cut(s) | 32, 134, 244, 664, 1142, 1375, 1648 |
| AcuI | CTGAAG | 3 cut(s) | 245, 549, 1515 |
| AfaI | GTAC | 4 cut(s) | 790, 974, 1409, 1846 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 304, 609, 945, 1117 |
| AjnI | CCWGG | 2 cut(s) | 71, 1727 |
| AlwI | GGATC | 5 cut(s) | 879, 1203, 1322, 1335, 1682 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 999 |
| Ama87I | CYCGRG | 1 cut(s) | 1331 |
| AoxI | GGCC | 6 cut(s) | 91, 306, 312, 936, 1351, 1769 |
| ApeKI | GCWGC | 9 cut(s) | 254, 467, 754, 1235, 1307, 1385, 1428, 1477, 1742 |
| ApoI | RAATTY | 7 cut(s) | 32, 134, 244, 664, 1142, 1375, 1648 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 564 |
| AspS9I | GGNCC | 6 cut(s) | 105, 600, 670, 767, 937, 1680 |
| AsuC2I | CCSGG | 2 cut(s) | 644, 945 |
| AsuHPI | GGTGA | 1 cut(s) | 551 |
| AsuII | TTCGAA | 1 cut(s) | 909 |
| AsuNHI | GCTAGC | 1 cut(s) | 1624 |
| AvaI | CYCGRG | 1 cut(s) | 1331 |
| AvaII | GGWCC | 5 cut(s) | 105, 600, 670, 767, 1680 |
| AxyI | CCTNAGG | 1 cut(s) | 1692 |
| BalI | TGGCCA | 1 cut(s) | 308 |
| BamHI | GGATCC | 1 cut(s) | 1327 |
| BanI | GGYRCC | 1 cut(s) | 333 |
| BanII | GRGCYC | 2 cut(s) | 131, 649 |
| BbvCI | CCTCAGC | 1 cut(s) | 750 |
| BbvI | GCAGC | 9 cut(s) | 241, 454, 741, 1247, 1294, 1397, 1440, 1489, 1754 |
| BccI | CCATC | 3 cut(s) | 116, 963, 1414 |
| BceAI | ACGGC | 1 cut(s) | 1456 |
| BciT130I | CCWGG | 2 cut(s) | 73, 1729 |
| BclI | TGATCA | 2 cut(s) | 651, 1174 |
| BcnI | CCSGG | 2 cut(s) | 644, 945 |
| BfaI | CTAG | 3 cut(s) | 207, 1112, 1625 |
| BfmI | CTRYAG | 3 cut(s) | 1225, 1470, 1612 |
| BisI | GCNGC | 9 cut(s) | 255, 468, 755, 1236, 1308, 1386, 1429, 1478, 1743 |
| BlpI | GCTNAGC | 1 cut(s) | 703 |
| BlsI | GCNGC | 9 cut(s) | 256, 469, 756, 1237, 1309, 1387, 1430, 1479, 1744 |
| BmcAI | AGTACT | 1 cut(s) | 1409 |
| Bme1390I | CCNGG | 4 cut(s) | 73, 644, 945, 1729 |
| Bme18I | GGWCC | 5 cut(s) | 105, 600, 670, 767, 1680 |
| BmeT110I | CYCGRG | 1 cut(s) | 1331 |
| BmgT120I | GGNCC | 6 cut(s) | 105, 600, 670, 767, 937, 1680 |
| BmiI | GGNNCC | 4 cut(s) | 335, 672, 768, 1329 |
| BmrFI | CCNGG | 4 cut(s) | 73, 644, 945, 1729 |
| BmrI | ACTGGG | 1 cut(s) | 449 |
| BmsI | GCATC | 6 cut(s) | 241, 360, 1253, 1372, 1480, 1765 |
| BmtI | GCTAGC | 1 cut(s) | 1628 |
| BmuI | ACTGGG | 1 cut(s) | 449 |
| BpmI | CTGGAG | 1 cut(s) | 1750 |
| Bpu10I | CCTNAGC | 3 cut(s) | 750, 1432, 1581 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 703 |
| Bpu14I | TTCGAA | 1 cut(s) | 909 |
| BpuEI | CTTGAG | 3 cut(s) | 248, 410, 599 |
| BpuMI | CCSGG | 2 cut(s) | 644, 945 |
| BsaJI | CCNNGG | 6 cut(s) | 72, 309, 603, 659, 944, 1332 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 304, 609, 945, 1117 |
| Bse118I | RCCGGY | 1 cut(s) | 1043 |
| Bse1I | ACTGG | 2 cut(s) | 444, 904 |
| Bse21I | CCTNAGG | 1 cut(s) | 1692 |
| Bse3DI | GCAATG | 1 cut(s) | 509 |
| BseBI | CCWGG | 2 cut(s) | 73, 1729 |
| BseDI | CCNNGG | 6 cut(s) | 72, 309, 603, 659, 944, 1332 |
| BseGI | GGATG | 2 cut(s) | 1525, 1588 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 304, 609, 945, 1117 |
| BseMI | GCAATG | 1 cut(s) | 509 |
| BseNI | ACTGG | 2 cut(s) | 444, 904 |
| BseRI | GAGGAG | 1 cut(s) | 1812 |
| BseXI | GCAGC | 9 cut(s) | 241, 454, 741, 1247, 1294, 1397, 1440, 1489, 1754 |
| BseYI | CCCAGC | 1 cut(s) | 448 |
| BsgI | GTGCAG | 2 cut(s) | 694, 1254 |
| Bsh1236I | CGCG | 2 cut(s) | 346, 1150 |
| BshFI | GGCC | 6 cut(s) | 93, 308, 314, 938, 1353, 1771 |
| BshNI | GGYRCC | 1 cut(s) | 333 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1331 |
| BsiSI | CCGG | 4 cut(s) | 56, 643, 944, 1044 |
| BslFI | GGGAC | 3 cut(s) | 89, 134, 1748 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 304, 609, 945, 1117 |
| BsmFI | GGGAC | 3 cut(s) | 89, 134, 1748 |
| BsmI | GAATGC | 3 cut(s) | 391, 482, 528 |
| BsnI | GGCC | 6 cut(s) | 93, 308, 314, 938, 1353, 1771 |
| BsoBI | CYCGRG | 1 cut(s) | 1331 |
| Bsp119I | TTCGAA | 1 cut(s) | 909 |
| Bsp1286I | GDGCHC | 2 cut(s) | 131, 649 |
| Bsp143I | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 703 |
| Bsp19I | CCATGG | 1 cut(s) | 659 |
| BspACI | CCGC | 3 cut(s) | 344, 1230, 1565 |
| BspANI | GGCC | 6 cut(s) | 93, 308, 314, 938, 1353, 1771 |
| BspFNI | CGCG | 2 cut(s) | 346, 1150 |
| BspHI | TCATGA | 1 cut(s) | 1129 |
| BspLI | GGNNCC | 4 cut(s) | 335, 672, 768, 1329 |
| BspMAI | CTGCAG | 1 cut(s) | 1474 |
| BspOI | GCTAGC | 1 cut(s) | 1628 |
| BspPI | GGATC | 5 cut(s) | 879, 1203, 1322, 1335, 1682 |
| BspQI | GCTCTTC | 2 cut(s) | 33, 264 |
| BspT104I | TTCGAA | 1 cut(s) | 909 |
| BspT107I | GGYRCC | 1 cut(s) | 333 |
| BsrDI | GCAATG | 1 cut(s) | 509 |
| BsrFI | RCCGGY | 1 cut(s) | 1043 |
| BsrI | ACTGG | 2 cut(s) | 444, 904 |
| BssAI | RCCGGY | 1 cut(s) | 1043 |
| BssECI | CCNNGG | 6 cut(s) | 72, 309, 603, 659, 944, 1332 |
| BssMI | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| BssT1I | CCWWGG | 3 cut(s) | 309, 603, 659 |
| Bst2UI | CCWGG | 2 cut(s) | 73, 1729 |
| Bst4CI | ACNGT | 7 cut(s) | 499, 548, 720, 788, 906, 995, 1120 |
| Bst6I | CTCTTC | 3 cut(s) | 33, 264, 1528 |
| BstBI | TTCGAA | 1 cut(s) | 909 |
| BstC8I | GCNNGC | 9 cut(s) | 709, 739, 936, 981, 1045, 1184, 1426, 1599, 1626 |
| BstDSI | CCRYGG | 1 cut(s) | 659 |
| BstF5I | GGATG | 2 cut(s) | 1525, 1588 |
| BstFNI | CGCG | 2 cut(s) | 346, 1150 |
| BstKTI | GATC | 8 cut(s) | 437, 654, 874, 1177, 1198, 1330, 1540, 1690 |
| BstMBI | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 632, 708, 1241 |
| BstNI | CCWGG | 2 cut(s) | 73, 1729 |
| BstSCI | CCNGG | 4 cut(s) | 71, 642, 943, 1727 |
| BstSFI | CTRYAG | 3 cut(s) | 1225, 1470, 1612 |
| BstUI | CGCG | 2 cut(s) | 346, 1150 |
| BstV1I | GCAGC | 9 cut(s) | 241, 454, 741, 1247, 1294, 1397, 1440, 1489, 1754 |
| BstX2I | RGATCY | 2 cut(s) | 1327, 1687 |
| BstYI | RGATCY | 2 cut(s) | 1327, 1687 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1692 |
| BsuRI | GGCC | 6 cut(s) | 93, 308, 314, 938, 1353, 1771 |
| BtgI | CCRYGG | 1 cut(s) | 659 |
| BtsCI | GGATG | 2 cut(s) | 1525, 1588 |
| BtsIMutI | CAGTG | 6 cut(s) | 402, 437, 1000, 1019, 1177, 1184 |
| Cac8I | GCNNGC | 9 cut(s) | 709, 739, 936, 981, 1045, 1184, 1426, 1599, 1626 |
| CaiI | CAGNNNCTG | 1 cut(s) | 999 |
| CciI | TCATGA | 1 cut(s) | 1129 |
| Cfr10I | RCCGGY | 1 cut(s) | 1043 |
| Cfr13I | GGNCC | 6 cut(s) | 105, 600, 670, 767, 937, 1680 |
| Csp6I | GTAC | 4 cut(s) | 789, 973, 1408, 1845 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 833, 868 |
| CviAII | CATG | 6 cut(s) | 660, 868, 1124, 1130, 1192, 1304 |
| CviQI | GTAC | 4 cut(s) | 789, 973, 1408, 1845 |
| DpnI | GATC | 8 cut(s) | 436, 653, 873, 1176, 1197, 1329, 1539, 1689 |
| DpnII | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| EaeI | YGGCCR | 1 cut(s) | 306 |
| Eam1104I | CTCTTC | 3 cut(s) | 33, 264, 1528 |
| EarI | CTCTTC | 3 cut(s) | 33, 264, 1528 |
| Eco130I | CCWWGG | 3 cut(s) | 309, 603, 659 |
| Eco24I | GRGCYC | 2 cut(s) | 131, 649 |
| Eco47I | GGWCC | 5 cut(s) | 105, 600, 670, 767, 1680 |
| Eco57I | CTGAAG | 3 cut(s) | 245, 549, 1515 |
| Eco81I | CCTNAGG | 1 cut(s) | 1692 |
| Eco88I | CYCGRG | 1 cut(s) | 1331 |
| EcoRI | GAATTC | 1 cut(s) | 1648 |
| EcoRII | CCWGG | 2 cut(s) | 71, 1727 |
| EcoT14I | CCWWGG | 3 cut(s) | 309, 603, 659 |
| EcoT38I | GRGCYC | 2 cut(s) | 131, 649 |
| ErhI | CCWWGG | 3 cut(s) | 309, 603, 659 |
| FaeI | CATG | 6 cut(s) | 663, 871, 1127, 1133, 1195, 1307 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 474, 506, 726, 758, 1554, 1586 |
| FaqI | GGGAC | 3 cut(s) | 89, 134, 1748 |
| FatI | CATG | 6 cut(s) | 659, 867, 1123, 1129, 1191, 1303 |
| FbaI | TGATCA | 2 cut(s) | 651, 1174 |
| Fnu4HI | GCNGC | 9 cut(s) | 255, 468, 755, 1236, 1308, 1386, 1429, 1478, 1743 |
| FokI | GGATG | 2 cut(s) | 1532, 1575 |
| FriOI | GRGCYC | 2 cut(s) | 131, 649 |
| Fsp4HI | GCNGC | 9 cut(s) | 255, 468, 755, 1236, 1308, 1386, 1429, 1478, 1743 |
| FspBI | CTAG | 3 cut(s) | 207, 1112, 1625 |
| GluI | GCNGC | 9 cut(s) | 255, 468, 755, 1236, 1308, 1386, 1429, 1478, 1743 |
| GsaI | CCCAGC | 1 cut(s) | 452 |
| GsuI | CTGGAG | 1 cut(s) | 1750 |
| HaeIII | GGCC | 6 cut(s) | 93, 308, 314, 938, 1353, 1771 |
| HapII | CCGG | 4 cut(s) | 56, 643, 944, 1044 |
| Hin1II | CATG | 6 cut(s) | 663, 871, 1127, 1133, 1195, 1307 |
| HindIII | AAGCTT | 1 cut(s) | 700 |
| HinfI | GANTC | 7 cut(s) | 59, 164, 841, 857, 1256, 1283, 1482 |
| HpaII | CCGG | 4 cut(s) | 56, 643, 944, 1044 |
| HphI | GGTGA | 1 cut(s) | 551 |
| Hpy166II | GTNNAC | 3 cut(s) | 168, 600, 1004 |
| Hpy8I | GTNNAC | 3 cut(s) | 168, 600, 1004 |
| HpyAV | CCTTC | 6 cut(s) | 447, 752, 950, 1127, 1315, 1671 |
| HpyCH4III | ACNGT | 7 cut(s) | 499, 548, 720, 788, 906, 995, 1120 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 632, 708, 1241 |
| Hsp92II | CATG | 6 cut(s) | 663, 871, 1127, 1133, 1195, 1307 |
| KroI | GCCGGC | 1 cut(s) | 1043 |
| KroNI | GCCGGC | 1 cut(s) | 1045 |
| Ksp22I | TGATCA | 2 cut(s) | 651, 1174 |
| Kzo9I | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| LguI | GCTCTTC | 2 cut(s) | 33, 264 |
| LmnI | GCTCC | 3 cut(s) | 445, 591, 1094 |
| Lsp1109I | GCAGC | 9 cut(s) | 241, 454, 741, 1247, 1294, 1397, 1440, 1489, 1754 |
| LweI | GCATC | 6 cut(s) | 241, 360, 1253, 1372, 1480, 1765 |
| MaeI | CTAG | 3 cut(s) | 207, 1112, 1625 |
| MaeIII | GTNAC | 2 cut(s) | 895, 989 |
| MalI | GATC | 8 cut(s) | 436, 653, 873, 1176, 1197, 1329, 1539, 1689 |
| MboI | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| MboII | GAAGA | 9 cut(s) | 50, 90, 251, 542, 632, 806, 1025, 1542, 1545 |
| MflI | RGATCY | 2 cut(s) | 1327, 1687 |
| MhlI | GDGCHC | 2 cut(s) | 131, 649 |
| MlsI | TGGCCA | 1 cut(s) | 308 |
| MluNI | TGGCCA | 1 cut(s) | 308 |
| MlyI | GAGTC | 3 cut(s) | 68, 173, 1292 |
| MmeI | TCCRAC | 1 cut(s) | 794 |
| Mox20I | TGGCCA | 1 cut(s) | 308 |
| MroNI | GCCGGC | 1 cut(s) | 1043 |
| MroXI | GAANNNNTTC | 1 cut(s) | 564 |
| MscI | TGGCCA | 1 cut(s) | 308 |
| MseI | TTAA | 2 cut(s) | 293, 1314 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1128 |
| Msp20I | TGGCCA | 1 cut(s) | 308 |
| MspA1I | CMGCKG | 1 cut(s) | 754 |
| MspI | CCGG | 4 cut(s) | 56, 643, 944, 1044 |
| MspR9I | CCNGG | 4 cut(s) | 73, 644, 945, 1729 |
| Mva1269I | GAATGC | 3 cut(s) | 391, 482, 528 |
| MvaI | CCWGG | 2 cut(s) | 73, 1729 |
| MvnI | CGCG | 2 cut(s) | 346, 1150 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 632, 708, 1241 |
| NaeI | GCCGGC | 1 cut(s) | 1045 |
| NciI | CCSGG | 2 cut(s) | 644, 945 |
| NcoI | CCATGG | 1 cut(s) | 659 |
| NdeII | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| NgoMIV | GCCGGC | 1 cut(s) | 1043 |
| NheI | GCTAGC | 1 cut(s) | 1624 |
| NlaIII | CATG | 6 cut(s) | 663, 871, 1127, 1133, 1195, 1307 |
| NlaIV | GGNNCC | 4 cut(s) | 335, 672, 768, 1329 |
| NmeAIII | GCCGAG | 1 cut(s) | 62 |
| NspV | TTCGAA | 1 cut(s) | 909 |
| PagI | TCATGA | 1 cut(s) | 1129 |
| PciSI | GCTCTTC | 2 cut(s) | 33, 264 |
| PctI | GAATGC | 3 cut(s) | 391, 482, 528 |
| PdiI | GCCGGC | 1 cut(s) | 1045 |
| PdmI | GAANNNNTTC | 1 cut(s) | 564 |
| PfeI | GAWTC | 4 cut(s) | 841, 857, 1256, 1482 |
| PflFI | GACNNNGTC | 1 cut(s) | 1166 |
| PkrI | GCNGC | 9 cut(s) | 256, 469, 756, 1237, 1309, 1387, 1430, 1479, 1744 |
| PleI | GAGTC | 3 cut(s) | 67, 172, 1291 |
| PpsI | GAGTC | 3 cut(s) | 67, 172, 1291 |
| PpuMI | RGGWCCY | 1 cut(s) | 1680 |
| Psp5II | RGGWCCY | 1 cut(s) | 1680 |
| Psp6I | CCWGG | 2 cut(s) | 71, 1727 |
| PspFI | CCCAGC | 1 cut(s) | 448 |
| PspGI | CCWGG | 2 cut(s) | 71, 1727 |
| PspN4I | GGNNCC | 4 cut(s) | 335, 672, 768, 1329 |
| PspPI | GGNCC | 6 cut(s) | 105, 600, 670, 767, 937, 1680 |
| PspPPI | RGGWCCY | 1 cut(s) | 1680 |
| PstI | CTGCAG | 1 cut(s) | 1474 |
| PstNI | CAGNNNCTG | 1 cut(s) | 999 |
| PsuI | RGATCY | 2 cut(s) | 1327, 1687 |
| PsyI | GACNNNGTC | 1 cut(s) | 1166 |
| PvuII | CAGCTG | 1 cut(s) | 754 |
| RsaI | GTAC | 4 cut(s) | 790, 974, 1409, 1846 |
| RsaNI | GTAC | 4 cut(s) | 789, 973, 1408, 1845 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1128 |
| SapI | GCTCTTC | 2 cut(s) | 33, 264 |
| SaqAI | TTAA | 2 cut(s) | 293, 1314 |
| SatI | GCNGC | 9 cut(s) | 255, 468, 755, 1236, 1308, 1386, 1429, 1478, 1743 |
| Sau3AI | GATC | 8 cut(s) | 434, 651, 871, 1174, 1195, 1327, 1537, 1687 |
| Sau96I | GGNCC | 6 cut(s) | 105, 600, 670, 767, 937, 1680 |
| ScaI | AGTACT | 1 cut(s) | 1409 |
| SchI | GAGTC | 3 cut(s) | 68, 173, 1292 |
| ScrFI | CCNGG | 4 cut(s) | 73, 644, 945, 1729 |
| SduI | GDGCHC | 2 cut(s) | 131, 649 |
| SfaNI | GCATC | 6 cut(s) | 241, 360, 1253, 1372, 1480, 1765 |
| SfcI | CTRYAG | 3 cut(s) | 1225, 1470, 1612 |
| SfuI | TTCGAA | 1 cut(s) | 909 |
| SinI | GGWCC | 5 cut(s) | 105, 600, 670, 767, 1680 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1128 |
| SmlI | CTYRAG | 3 cut(s) | 227, 425, 578 |
| SmoI | CTYRAG | 3 cut(s) | 227, 425, 578 |
| SsiI | CCGC | 3 cut(s) | 344, 1230, 1565 |
| SspI | AATATT | 1 cut(s) | 420 |
| SspMI | CTAG | 3 cut(s) | 207, 1112, 1625 |
| StyD4I | CCNGG | 4 cut(s) | 71, 642, 943, 1727 |
| StyI | CCWWGG | 3 cut(s) | 309, 603, 659 |
| TaaI | ACNGT | 7 cut(s) | 499, 548, 720, 788, 906, 995, 1120 |
| TaqI | TCGA | 7 cut(s) | 101, 131, 321, 909, 930, 958, 1356 |
| TatI | WGTACW | 2 cut(s) | 788, 1407 |
| TfiI | GAWTC | 4 cut(s) | 841, 857, 1256, 1482 |
| Tru1I | TTAA | 2 cut(s) | 293, 1314 |
| Tru9I | TTAA | 2 cut(s) | 293, 1314 |
| TscAI | CASTG | 6 cut(s) | 402, 444, 1000, 1026, 1177, 1184 |
| TseI | GCWGC | 9 cut(s) | 254, 467, 754, 1235, 1307, 1385, 1428, 1477, 1742 |
| TspDTI | ATGAA | 7 cut(s) | 839, 1026, 1112, 1146, 1180, 1418, 1536 |
| TspGWI | ACGGA | 1 cut(s) | 534 |
| TspRI | CASTG | 6 cut(s) | 402, 444, 1000, 1026, 1177, 1184 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1166 |
| VpaK11BI | GGWCC | 5 cut(s) | 105, 600, 670, 767, 1680 |
| XapI | RAATTY | 7 cut(s) | 32, 134, 244, 664, 1142, 1375, 1648 |
| XmnI | GAANNNNTTC | 1 cut(s) | 564 |
| XspI | CTAG | 3 cut(s) | 207, 1112, 1625 |
| ZrmI | AGTACT | 1 cut(s) | 1409 |