Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004759

Physical Location & Seq

Genomic Coordinates Reverse (-)

4765398 .. 4768993

Gene Structure 3596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1069300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGTTGTGTGCTTGTTCAGGAGAGCAATTCAAATTCGAGGAGCCGCCGCAGTCCCCGGAGTCCCTTGCCACGAGGGACTTCTCGGCGAGTTGCCTTTCGTCTAGGACCGGCGACTGGGAGTCCAAATTTGAAGACATTCAAGTGGATGAAGCTGAATCCACTCTTAAAGAAGCTCTATCTTTGAATTATGAGGAAGCTAGAGCTTTGTTGGGGAGGCTTGAATTCCAAAGGGGGAATTTTGATGCTGCACTTCAGGTGTTTCAAGGTATTGAAATTAGAAATTTAACCCCGCGGATGGCCAAGGCTATCGTGGAGAGAACTAGGCAAAGAAAGCCGCGCACGAAAGGAGATACTGTGGTTCTTCCCAGTGTAATGTCAATGCACTCTGTGAGCCTACTTATTGAAGCAATATTACTCAAGGCAATATCATTGGGAGAACTTGGAAGATATATAGATGCTGCAAAGGAGTGCAAAGTTATTCTTGATACGGTTGAATCAGCTTTACCTAATGGAATGCTTCAAGACATTGGCGAGGACTGCAAATTGCCAGACATGTTTCACAAAGCGCTCGAGCTGCTCCCCAATTTATGGACAAAGGCAGGCTATCTTGATGAGGCTATTACTGCATATCGCCGGGCTCTAATCAAGCCATGGAATTTGGATCCGGAGAGGTTAGCTGCTATTCAGAAAAGCTTAGCTTGCACATTACTCTACGGCGGTGTTGAAGCAAACCTTCCCCCTCATTCACAAATATGGGGCATAACTATGCCTAAAAATAATACAGAAGAAGCAATTCTGTTGTTGGTAATTCTTATGAAAAAGGTGGCTTTGCGAGAGATAAAGTGGGATCCAGAAATCATGGATCATCTGACTTATGCTCTTTCTCTTACCGGATTGTATGAATTATTAGCAGATCATGTGGAGCAGGCTCTTCCGGGATTATATAGACGAGCGGAGAGATGGTACTTTCTTGCTCTTTGTTATAGTGCCTGTGGAAAAAATGAAGTAGCCTTGAACCTTTTGAAAAAGGTTGCAGGCTGTTTGGAAGCAAAGAACAAGCCTCACTTCCCTTCTTTTCTGTTGGGAGCAAAATTGTGCTCACAAGATCCAATTCATGCTCGCGAAGGGATAGAATTTTCGCATAAAGCTATTGACTTGGTGAATCATCAATGCGAGCATTTCATGGGTCAATGCCATAAATATCTTGGTGTTTGCTATGGCGGTGCAGCAAGAGCTTCTCTGTCGGATTCTGAAAGAGTGTCTTTTCAAAGTGAATCCTTGAACTCTCTAAACCTTGCTGCTCTTAACGGGAAGGAGGATCCCGAGGTGGTGTTTAGTCTGGGCCTCGAAAATGCAGTGCAAAGAAATCTGGATGCAGCTTTCAGTAACGCAATGAAGTACTCAGATATGGTGGCTGGCAGCTCAGGACAAGGTTGGAAGCTATTGGCGCTTATAGTTTCCGCAGAGCAGCAGTTCAAGGATGCTGAAACAATAGTTGATTTTGCTTTGGACGAAGCCGGAAGAGTGGATCAGTTAGAACTGCTCAGACTGAAAGCTGTGCTTCAAGTTGCTCAGGAACATCCTAAGCAAGCAATAGAAACCTACAGAATGTTGCTAACTGTTGTCCAAGCACAAAGGGATCAAAAAGCGAAAAACTCCGAGCAAGAGAAACCCTTTGATTCTGAGGCATTTGTGGAAAGAAATTTGGAAAAGGAAGCCTGGCGGGACTTGGCAACCGTTTATACAAAACTTGGTTTGTGGACTGATGCAGAAATATGCGCCAACAAAGCCAAGTTGATTGAATTCTATTCACCCCATAGTTGGCATACGACAGGTAAGTTATTTGAAGCTCAATCGCAATACAAGGAAGCCCTGATTTCCTTCTCGGTCTCATTGTCGATAGAGCCAGATTATGTTCCAAGCATCGTTTCGACTGCAGAAGTGTTGATGAAACTCGGTAGCCAGTCACTCCCTATAGCAAGAAGCTTTCTAATGAACGCGCTGCGATTAGAACCGACAAACCACGAGGCGTGGTTGAACCTCGGATTGATTTCAAAGAAGGAAGGATTGTTACAAGAAGCAGCAGACTTTTTTCAAGCTGCGCACGAGCTTCAGCTTTCAGCTCCAGTTCGAAGCTTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016310 GO:0019637 GO:0030258 GO:0033036 GO:0034613 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0051179 GO:0051641 GO:0070727 GO:0071704 GO:0071944 GO:0072657 GO:0072659 GO:1990778

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

715

Amino Acids

79.77

Weight (kDa)

5.46

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_CcmH_CycH	PF23914	606 - 703	8.7e-08	Cytochrome c-type biogenesis protein H TPR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27460 AT1G27460 AT1G27460
fragaria_vesca	FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080
malus_domestica	MD15G1069300.v1.1
prunus_persica	Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1
pyrus_communis	pycom08g06750 pycom15g06540
rosa_chinensis	RchiOBHm_Chr6g0309631
rosa_laevigata	RLG00000010548
rosa_multiflora	Rmu_co8186100.1_g000001 Rmu_sc0007632.1_g000005 Rmu_sc0008462.1_g000001
rosa_roxburghii	Rroxscaffold_7G00159270
rosa_rugosa	Rorug06G0373200 Rorug06G0373300
rosa_samantha	Rh6AG486900 Rh6BG496500 Rh6CG501200 Rh6DG487400
rosa_wichuraiana	Rw6G042410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2103
AccB7I	CCANNNNNTGG	1 cut(s)	588
AccBSI	CCGCTC	1 cut(s)	953
AccII	CGCG	4 cut(s)	292, 337, 1122, 2000
AccIII	TCCGGA	1 cut(s)	664
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	9 cut(s)	32, 125, 221, 235, 280, 655, 1133, 1702, 1802
AcuI	CTGAAG	2 cut(s)	236, 2096
AdeI	CACNNNGTG	1 cut(s)	388
AfaI	GTAC	2 cut(s)	965, 1400
AfeI	AGCGCT	1 cut(s)	567
AfiI	CCNNNNNNNGG	4 cut(s)	114, 295, 588, 1821
AflIII	ACRYGT	1 cut(s)	552
AhdI	GACNNNNNGTC	1 cut(s)	118
AjnI	CCWGG	1 cut(s)	1718
AjuI	GAANNNNNNNTTGG	2 cut(s)	1912, 1944
Alw21I	GWGCWC	1 cut(s)	1100
Alw26I	GTCTC	1 cut(s)	1894
Ama87I	CYCGRG	2 cut(s)	569, 1322
Aor13HI	TCCGGA	1 cut(s)	664
Aor51HI	AGCGCT	1 cut(s)	567
AoxI	GGCC	2 cut(s)	297, 1342
ApoI	RAATTY	9 cut(s)	32, 125, 221, 235, 280, 655, 1133, 1702, 1802
Asp700I	GAANNNNTTC	2 cut(s)	135, 792
AspLEI	GCGC	6 cut(s)	339, 568, 1450, 1781, 2002, 2104
AspS9I	GGNCC	2 cut(s)	105, 1342
AsuC2I	CCSGG	3 cut(s)	56, 635, 936
AsuHPI	GGTGA	2 cut(s)	1171, 1803
AsuII	TTCGAA	1 cut(s)	2131
AvaI	CYCGRG	2 cut(s)	569, 1322
AvaII	GGWCC	1 cut(s)	105
BaeI	ACNNNNGTAYC	2 cut(s)	342, 375
BalI	TGGCCA	1 cut(s)	299
BamHI	GGATCC	3 cut(s)	661, 847, 1318
BanII	GRGCYC	1 cut(s)	640
BarI	GAAGNNNNNNTAC	4 cut(s)	396, 428, 2055, 2087
BauI	CACGAG	3 cut(s)	70, 2024, 2105
BbsI	GAAGAC	1 cut(s)	138
Bbv12I	GWGCWC	1 cut(s)	1100
BccI	CCATC	2 cut(s)	289, 954
BceAI	ACGGC	1 cut(s)	730
BciT130I	CCWGG	1 cut(s)	1720
BcnI	CCSGG	3 cut(s)	56, 635, 936
BcoDI	GTCTC	1 cut(s)	1894
BfaI	CTAG	3 cut(s)	102, 198, 321
BfmI	CTRYAG	3 cut(s)	1603, 1935, 1974
BfoI	RGCGCY	2 cut(s)	569, 1451
BlpI	GCTNAGC	1 cut(s)	694
BmcAI	AGTACT	1 cut(s)	1400
Bme1390I	CCNGG	4 cut(s)	56, 635, 936, 1720
Bme18I	GGWCC	1 cut(s)	105
BmeRI	GACNNNNNGTC	1 cut(s)	118
BmeT110I	CYCGRG	2 cut(s)	569, 1322
BmgT120I	GGNCC	2 cut(s)	105, 1342
BmiI	GGNNCC	4 cut(s)	42, 663, 849, 1320
BmrFI	CCNGG	4 cut(s)	56, 635, 936, 1720
BmrI	ACTGGG	2 cut(s)	124, 360
BmsI	GCATC	6 cut(s)	232, 445, 1363, 1471, 1756, 1932
BmuI	ACTGGG	2 cut(s)	124, 360
BpiI	GAAGAC	1 cut(s)	138
BpmI	CTGGAG	1 cut(s)	2109
Bpu10I	CCTNAGC	3 cut(s)	1423, 1572, 1584
Bpu1102I	GCTNAGC	1 cut(s)	694
Bpu14I	TTCGAA	1 cut(s)	2131
BpuEI	CTTGAG	1 cut(s)	401
BpuMI	CCSGG	3 cut(s)	56, 635, 936
BsaI	GGTCTC	1 cut(s)	1894
BsaJI	CCNNGG	6 cut(s)	54, 290, 300, 650, 1323, 2041
BsaWI	WCCGGW	2 cut(s)	664, 890
BsaXI	ACNNNNNCTCC	4 cut(s)	339, 369, 947, 977
Bsc4I	CCNNNNNNNGG	4 cut(s)	114, 295, 588, 1821
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	4 cut(s)	119, 366, 1963, 2126
Bse3DI	GCAATG	1 cut(s)	1398
BseAI	TCCGGA	1 cut(s)	664
BseBI	CCWGG	1 cut(s)	1720
BseDI	CCNNGG	6 cut(s)	54, 290, 300, 650, 1323, 2041
BseGI	GGATG	5 cut(s)	151, 300, 1378, 1486, 1579
BseLI	CCNNNNNNNGG	4 cut(s)	114, 295, 588, 1821
BseMI	GCAATG	1 cut(s)	1398
BseMII	CTCAG	5 cut(s)	1416, 1437, 1558, 1586, 1674
BseNI	ACTGG	4 cut(s)	119, 366, 1963, 2126
BseRI	GAGGAG	1 cut(s)	53
BsgI	GTGCAG	2 cut(s)	231, 1245
Bsh1236I	CGCG	4 cut(s)	292, 337, 1122, 2000
BshFI	GGCC	2 cut(s)	299, 1344
BsiHKAI	GWGCWC	1 cut(s)	1100
BsiHKCI	CYCGRG	2 cut(s)	569, 1322
BsiSI	CCGG	7 cut(s)	56, 108, 634, 665, 891, 935, 1518
BslFI	GGGAC	4 cut(s)	37, 46, 89, 1739
BslI	CCNNNNNNNGG	4 cut(s)	114, 295, 588, 1821
BsmAI	GTCTC	1 cut(s)	1894
BsmFI	GGGAC	4 cut(s)	37, 46, 89, 1739
BsmI	GAATGC	1 cut(s)	519
BsnI	GGCC	2 cut(s)	299, 1344
Bso31I	GGTCTC	1 cut(s)	1894
BsoBI	CYCGRG	2 cut(s)	569, 1322
Bsp119I	TTCGAA	1 cut(s)	2131
Bsp1286I	GDGCHC	2 cut(s)	640, 1100
Bsp13I	TCCGGA	1 cut(s)	664
Bsp143I	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
Bsp1720I	GCTNAGC	1 cut(s)	694
Bsp19I	CCATGG	1 cut(s)	650
Bsp68I	TCGCGA	1 cut(s)	1122
BspANI	GGCC	2 cut(s)	299, 1344
BspCNI	CTCAG	5 cut(s)	1415, 1436, 1557, 1585, 1675
BspEI	TCCGGA	1 cut(s)	664
BspFNI	CGCG	4 cut(s)	292, 337, 1122, 2000
BspLI	GGNNCC	4 cut(s)	42, 663, 849, 1320
BspMAI	CTGCAG	1 cut(s)	1939
BspQI	GCTCTTC	1 cut(s)	936
BspT104I	TTCGAA	1 cut(s)	2131
BspTNI	GGTCTC	1 cut(s)	1894
BsrBI	CCGCTC	1 cut(s)	953
BsrDI	GCAATG	1 cut(s)	1398
BsrFI	RCCGGY	1 cut(s)	107
BsrI	ACTGG	4 cut(s)	119, 366, 1963, 2126
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	6 cut(s)	54, 290, 300, 650, 1323, 2041
BssMI	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
BssSI	CACGAG	3 cut(s)	70, 2024, 2105
BssT1I	CCWWGG	2 cut(s)	300, 650
Bst2BI	CACGAG	3 cut(s)	70, 2024, 2105
Bst2UI	CCWGG	1 cut(s)	1720
Bst4CI	ACNGT	4 cut(s)	355, 490, 1621, 1738
Bst6I	CTCTTC	2 cut(s)	936, 1516
BstBI	TTCGAA	1 cut(s)	2131
BstC8I	GCNNGC	8 cut(s)	601, 700, 927, 1036, 1120, 1175, 1417, 1590
BstDEI	CTNAG	7 cut(s)	694, 1402, 1423, 1544, 1572, 1584, 1683
BstDSI	CCRYGG	2 cut(s)	290, 650
BstF5I	GGATG	5 cut(s)	151, 300, 1378, 1486, 1579
BstFNI	CGCG	4 cut(s)	292, 337, 1122, 2000
BstH2I	RGCGCY	2 cut(s)	569, 1451
BstHHI	GCGC	6 cut(s)	339, 568, 1450, 1781, 2002, 2104
BstKTI	GATC	8 cut(s)	664, 850, 865, 916, 1108, 1321, 1531, 1642
BstMAI	GTCTC	1 cut(s)	1894
BstMBI	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
BstMWI	GCNNNNNNNGC	8 cut(s)	331, 537, 574, 623, 699, 1232, 1447, 1787
BstNI	CCWGG	1 cut(s)	1720
BstNSI	RCATGY	1 cut(s)	556
BstSCI	CCNGG	4 cut(s)	54, 633, 934, 1718
BstSFI	CTRYAG	3 cut(s)	1603, 1935, 1974
BstUI	CGCG	4 cut(s)	292, 337, 1122, 2000
BstV2I	GAAGAC	1 cut(s)	138
BstX2I	RGATCY	4 cut(s)	661, 847, 1105, 1318
BstYI	RGATCY	4 cut(s)	661, 847, 1105, 1318
BsuRI	GGCC	2 cut(s)	299, 1344
BtgI	CCRYGG	2 cut(s)	290, 650
BtsCI	GGATG	5 cut(s)	151, 300, 1378, 1486, 1579
BtsI	GCAGTG	1 cut(s)	1362
BtsIMutI	CAGTG	2 cut(s)	373, 1362
BtuMI	TCGCGA	1 cut(s)	1122
Cac8I	GCNNGC	8 cut(s)	601, 700, 927, 1036, 1120, 1175, 1417, 1590
CfoI	GCGC	6 cut(s)	339, 568, 1450, 1781, 2002, 2104
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	2 cut(s)	105, 1342
Cfr42I	CCGCGG	1 cut(s)	293
Csp6I	GTAC	2 cut(s)	964, 1399
CviAII	CATG	6 cut(s)	553, 651, 859, 917, 1115, 1183
CviQI	GTAC	2 cut(s)	964, 1399
DdeI	CTNAG	7 cut(s)	694, 1402, 1423, 1544, 1572, 1584, 1683
DpnI	GATC	8 cut(s)	663, 849, 864, 915, 1107, 1320, 1530, 1641
DpnII	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
DraIII	CACNNNGTG	1 cut(s)	388
DriI	GACNNNNNGTC	1 cut(s)	118
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	2 cut(s)	936, 1516
Eam1105I	GACNNNNNGTC	1 cut(s)	118
EarI	CTCTTC	2 cut(s)	936, 1516
Eco130I	CCWWGG	2 cut(s)	300, 650
Eco24I	GRGCYC	1 cut(s)	640
Eco31I	GGTCTC	1 cut(s)	1894
Eco47I	GGWCC	1 cut(s)	105
Eco47III	AGCGCT	1 cut(s)	567
Eco57I	CTGAAG	2 cut(s)	236, 2096
Eco88I	CYCGRG	2 cut(s)	569, 1322
EcoRI	GAATTC	2 cut(s)	221, 1802
EcoRII	CCWGG	1 cut(s)	1718
EcoT14I	CCWWGG	2 cut(s)	300, 650
EcoT38I	GRGCYC	1 cut(s)	640
ErhI	CCWWGG	2 cut(s)	300, 650
FaeI	CATG	6 cut(s)	556, 654, 862, 920, 1118, 1186
FaqI	GGGAC	4 cut(s)	37, 46, 89, 1739
FatI	CATG	6 cut(s)	552, 650, 858, 916, 1114, 1182
FauI	CCCGC	2 cut(s)	297, 1716
FokI	GGATG	5 cut(s)	158, 307, 1385, 1493, 1566
FriOI	GRGCYC	1 cut(s)	640
FspBI	CTAG	3 cut(s)	102, 198, 321
FspI	TGCGCA	1 cut(s)	2103
GlaI	GCGC	6 cut(s)	338, 567, 1449, 1780, 2001, 2103
GsuI	CTGGAG	1 cut(s)	2109
HaeII	RGCGCY	2 cut(s)	569, 1451
HaeIII	GGCC	2 cut(s)	299, 1344
HapII	CCGG	7 cut(s)	56, 108, 634, 665, 891, 935, 1518
HhaI	GCGC	6 cut(s)	339, 568, 1450, 1781, 2002, 2104
Hin1II	CATG	6 cut(s)	556, 654, 862, 920, 1118, 1186
Hin6I	GCGC	6 cut(s)	337, 566, 1448, 1779, 2000, 2102
HinP1I	GCGC	6 cut(s)	337, 566, 1448, 1779, 2000, 2102
HindIII	AAGCTT	3 cut(s)	691, 1984, 2134
HinfI	GANTC	8 cut(s)	59, 119, 155, 494, 1162, 1247, 1274, 1679
HpaII	CCGG	7 cut(s)	56, 108, 634, 665, 891, 935, 1518
HphI	GGTGA	2 cut(s)	1171, 1803
Hpy166II	GTNNAC	1 cut(s)	1761
Hpy188I	TCNGA	9 cut(s)	687, 870, 1246, 1252, 1405, 1547, 1660, 1684, 2045
Hpy8I	GTNNAC	1 cut(s)	1761
HpyAV	CCTTC	7 cut(s)	743, 1080, 1118, 1306, 1891, 2053, 2057
HpyCH4III	ACNGT	4 cut(s)	355, 490, 1621, 1738
HpyF10VI	GCNNNNNNNGC	8 cut(s)	331, 537, 574, 623, 699, 1232, 1447, 1787
HpyF3I	CTNAG	7 cut(s)	694, 1402, 1423, 1544, 1572, 1584, 1683
Hsp92II	CATG	6 cut(s)	556, 654, 862, 920, 1118, 1186
HspAI	GCGC	6 cut(s)	337, 566, 1448, 1779, 2000, 2102
Kpn2I	TCCGGA	1 cut(s)	664
KspI	CCGCGG	1 cut(s)	293
Kzo9I	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
LguI	GCTCTTC	1 cut(s)	936
LmnI	GCTCC	5 cut(s)	40, 582, 922, 1085, 2128
LweI	GCATC	6 cut(s)	232, 445, 1363, 1471, 1756, 1932
MaeI	CTAG	3 cut(s)	102, 198, 321
MaeIII	GTNAC	3 cut(s)	1385, 1965, 2070
MalI	GATC	8 cut(s)	663, 849, 864, 915, 1107, 1320, 1530, 1641
MbiI	CCGCTC	1 cut(s)	953
MboI	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
MboII	GAAGA	6 cut(s)	143, 353, 456, 797, 923, 1533
MflI	RGATCY	4 cut(s)	661, 847, 1105, 1318
MhlI	GDGCHC	2 cut(s)	640, 1100
MlsI	TGGCCA	1 cut(s)	299
MluNI	TGGCCA	1 cut(s)	299
MlyI	GAGTC	2 cut(s)	68, 128
MmeI	TCCRAC	2 cut(s)	1224, 1415
Mox20I	TGGCCA	1 cut(s)	299
MroI	TCCGGA	1 cut(s)	664
MroXI	GAANNNNTTC	2 cut(s)	135, 792
MscI	TGGCCA	1 cut(s)	299
MseI	TTAA	3 cut(s)	165, 284, 1305
MslI	CAYNNNNRTG	3 cut(s)	140, 751, 764
Msp20I	TGGCCA	1 cut(s)	299
MspA1I	CMGCKG	1 cut(s)	292
MspI	CCGG	7 cut(s)	56, 108, 634, 665, 891, 935, 1518
MspR9I	CCNGG	4 cut(s)	56, 635, 936, 1720
Mva1269I	GAATGC	1 cut(s)	519
MvaI	CCWGG	1 cut(s)	1720
MvnI	CGCG	4 cut(s)	292, 337, 1122, 2000
MwoI	GCNNNNNNNGC	8 cut(s)	331, 537, 574, 623, 699, 1232, 1447, 1787
NciI	CCSGG	3 cut(s)	56, 635, 936
NcoI	CCATGG	1 cut(s)	650
NdeII	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
NlaIII	CATG	6 cut(s)	556, 654, 862, 920, 1118, 1186
NlaIV	GGNNCC	4 cut(s)	42, 663, 849, 1320
NmeAIII	GCCGAG	1 cut(s)	62
NmuCI	GTSAC	1 cut(s)	1965
NruI	TCGCGA	1 cut(s)	1122
NsbI	TGCGCA	1 cut(s)	2103
NspI	RCATGY	1 cut(s)	556
NspV	TTCGAA	1 cut(s)	2131
PaeR7I	CTCGAG	1 cut(s)	569
PciI	ACATGT	1 cut(s)	552
PciSI	GCTCTTC	1 cut(s)	936
PctI	GAATGC	1 cut(s)	519
PdmI	GAANNNNTTC	2 cut(s)	135, 792
PfeI	GAWTC	6 cut(s)	155, 494, 1162, 1247, 1274, 1679
PflMI	CCANNNNNTGG	1 cut(s)	588
PfoI	TCCNGGA	1 cut(s)	934
PleI	GAGTC	2 cut(s)	67, 127
PpsI	GAGTC	2 cut(s)	67, 127
PscI	ACATGT	1 cut(s)	552
Psp6I	CCWGG	1 cut(s)	1718
PspGI	CCWGG	1 cut(s)	1718
PspN4I	GGNNCC	4 cut(s)	42, 663, 849, 1320
PspPI	GGNCC	2 cut(s)	105, 1342
PspXI	VCTCGAGB	1 cut(s)	569
PstI	CTGCAG	1 cut(s)	1939
PsuI	RGATCY	4 cut(s)	661, 847, 1105, 1318
RruI	TCGCGA	1 cut(s)	1122
RsaI	GTAC	2 cut(s)	965, 1400
RsaNI	GTAC	2 cut(s)	964, 1399
RseI	CAYNNNNRTG	3 cut(s)	140, 751, 764
SacII	CCGCGG	1 cut(s)	293
SapI	GCTCTTC	1 cut(s)	936
SaqAI	TTAA	3 cut(s)	165, 284, 1305
Sau3AI	GATC	8 cut(s)	661, 847, 862, 913, 1105, 1318, 1528, 1639
Sau96I	GGNCC	2 cut(s)	105, 1342
ScaI	AGTACT	1 cut(s)	1400
SchI	GAGTC	2 cut(s)	68, 128
ScrFI	CCNGG	4 cut(s)	56, 635, 936, 1720
SduI	GDGCHC	2 cut(s)	640, 1100
SfaNI	GCATC	6 cut(s)	232, 445, 1363, 1471, 1756, 1932
SfcI	CTRYAG	3 cut(s)	1603, 1935, 1974
Sfr274I	CTCGAG	1 cut(s)	569
Sfr303I	CCGCGG	1 cut(s)	293
SfuI	TTCGAA	1 cut(s)	2131
SgrBI	CCGCGG	1 cut(s)	293
SinI	GGWCC	1 cut(s)	105
SlaI	CTCGAG	1 cut(s)	569
SmiMI	CAYNNNNRTG	3 cut(s)	140, 751, 764
SmlI	CTYRAG	2 cut(s)	416, 569
SmoI	CTYRAG	2 cut(s)	416, 569
SspI	AATATT	1 cut(s)	411
SspMI	CTAG	3 cut(s)	102, 198, 321
StyD4I	CCNGG	4 cut(s)	54, 633, 934, 1718
StyI	CCWWGG	2 cut(s)	300, 650
TaaI	ACNGT	4 cut(s)	355, 490, 1621, 1738
TaqI	TCGA	6 cut(s)	36, 570, 1347, 1898, 1931, 2131
TaqII	GACCGA	1 cut(s)	1876
TatI	WGTACW	1 cut(s)	1398
TauI	GCSGC	3 cut(s)	46, 49, 337
TfiI	GAWTC	6 cut(s)	155, 494, 1162, 1247, 1274, 1679
Tru1I	TTAA	3 cut(s)	165, 284, 1305
Tru9I	TTAA	3 cut(s)	165, 284, 1305
TscAI	CASTG	2 cut(s)	373, 1362
TseFI	GTSAC	1 cut(s)	1965
Tsp45I	GTSAC	1 cut(s)	1965
TspDTI	ATGAA	9 cut(s)	162, 830, 915, 1017, 1103, 1171, 1409, 1964, 2009
TspRI	CASTG	2 cut(s)	373, 1362
Van91I	CCANNNNNTGG	1 cut(s)	588
VpaK11BI	GGWCC	1 cut(s)	105
XapI	RAATTY	9 cut(s)	32, 125, 221, 235, 280, 655, 1133, 1702, 1802
XceI	RCATGY	1 cut(s)	556
XcmI	CCANNNNNNNNNTGG	2 cut(s)	307, 1202
XhoI	CTCGAG	1 cut(s)	569
XmnI	GAANNNNTTC	2 cut(s)	135, 792
XspI	CTAG	3 cut(s)	102, 198, 321
ZrmI	AGTACT	1 cut(s)	1400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.