Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0004759

Physical Location & Seq

Genomic Coordinates Reverse (-)

4019316 .. 4021993

Gene Structure 2678 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g06540.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGTTGTGTGCCTGTTCAGGAGAGCAATTCAAATTCGAGGAGCCGCCGCACTCGCCGGAGTCCCTTGCCACGAGGGACTTCTCGGCGAGTGGCCTTTCGTCTAGGACCGGCGACTGGGAGTCCAAATTTGAAGACATTCAAGTGGATGAAGCTGAATCCACTCTTAAAGAAGCTCTATCTTTGAATTATGAGGAAGCTAGAGCTTTGTTGGGGAGGCTTGAATTCCAAAGGGGGAATTTTGATGCTGCACTTCAGGTGTTTCAAGGTATTGAAATTAAAAATTTAACCCCGCGGATGGCCAAGGCTATCGTGGAGAGAACTAGGCAAAGAAAGCCGCGCACGAAAGGCGATAATGTGGTTCTTCCCAGTGTAATGTCAATGCACTCTGTGAGCCTACTTATTGAAGCAATATTACTCAAGGCAAAATCATTGGGAGAACTTGGAAGATATATGGATGCTGCAAAGGAGTGCAAAGTTATTCTTGATACGGTTGAATCAGCTTTACCTAATGGAATGCTTCTTCAAGACATTGGCGAGGACTGCAAATTGCCAGACATGTTTCACAAAGCACTCGAGCTGCTCCCCAATTTATGGACAAAGGCAGGCTATCTTGATGAGGCTATTACTGCATATCGCCGAGCTCTAATCAAGCCATGGAATTTGGAACCGGAGAGGTTAGCTGCTATTCAGAAAAGCTTAGCTTGCACATTACTCTATGGCGGTGTTGAAGCAAACCTTCCCCCTCAGTTACAAATATGGGGCATAACTATGCCTAAAAATAATACAGAAGAAGCAATTCTGTTGTTGGTAATTCTTATGAAAAAGGTGGCTTTGCGAGAGATAAAGTGGGATCCAGAACTCATGGATCATCTGACTTATGCTCTTTCTGTTACCGGATTGTATGAATTATTAGCAGATCATGTGGAGCAGGCTCTTCCGGGATTATATAGACGAGCGGAGAGATGGTACTTTCTTGCTCTTTGTTATAGTGCCTGTGGAAAAAATGAAGTAGCCTTGAACCTTTTGAAGAAGGTTGCAGGCTGTTCGGAAGCAAAGAACAAGCCCCACTTTCCTTCTTTTCTGTTGGGAGCAAAATTGTGCTCACAAGATCCAATTCATGCTTGCGAAGGGATAGAATTTTCGCGTAAAGCTATTGACTTGGTGAATCATCAATGCGAGCATTTCATGGGTCAATGCCATAAATATCTTGGTGTTTGCTATGGCGGTGCAGCAAGAGCTTCTCTGTCGGATTCTGAAAGAGTGTATTTTCAAAGTGAATCGTTGAACTCTCTAAACCTTGCTGCTCTTAACGGGAAGGAGGATCCCGAGGTGTTGTTTAGTCTGGGCCTCGAAAATGCAGTGCAAAGAAATCTGGATGCAGCTTTCAGTAACGCAATGAAGTACTCGGATATGATGGCTGGCAGCTCAGGACAAGGTTGGAAGCTATTGGCGCTTACAGTTTCTGCTGAGCAGCGGTTCAAGGATGCTGAAACGATAGTTGATTTTGCTTTGGACGAAGCCGGAAGAGTGGATCAGTTAGAACTGCTCAGACTGAAAGCTGTGCTTCAAGTTGCTCAGGAACATCCAAAGCAAGCAATAGAAACCTACAGAATGTTGCTAACTGTTGTTCAAGCACAAAGGGATCAAAAAGCAAAAAACTCTGAGCAAGAGAAACCCTTTGATTCTGAGGCATTTGAGGAAAGCAATTTGGAAAAGGAAGCCTGGCGGGACTTGGCAACCGTTTATACAAAACTCGGTTTGTGGACTGATGCAGAAATATGCGTCAACAAAGCCAAGTTGATTGAATTCTATTCTCCCCATAGTTGGCATACAACAGGTAAGTTCTTTGAAGCTCAATCGCAATATAAGGAAGCCCTGATTTCCTTCTCGGTCTCATTGTCGATAGAGCCAGATTATGTTCCAAGCATCGTTTCGACTGCAGAAGTGTTGATGAAACTCGGTAGCCAGTCACTCCCTATAGCAAGAAGCTTTCTAATGAACGCGCTGCGATTAGAACCAACAAACCACGAGGCGTGGTTGAACCTTGGATTGATTTCAAAGAAGGAAGGATCGTTACAACAAGCAGCAGACTTTTTTCAAGCTGCGCACGAGCTTCAGCTTTCAGCTCCAGTTCGAAGCTTTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016310 GO:0019637 GO:0030258 GO:0033036 GO:0034613 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0051179 GO:0051641 GO:0070727 GO:0071704 GO:0071944 GO:0072657 GO:0072659 GO:1990778

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

716

Amino Acids

79.94

Weight (kDa)

5.48

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27460 AT1G27460 AT1G27460
fragaria_vesca	FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080 FvH4_2g33080
malus_domestica	MD15G1069300.v1.1
prunus_persica	Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1 Prupe.1G422800_v2.0.a1
pyrus_communis	pycom08g06750 pycom15g06540
rosa_chinensis	RchiOBHm_Chr6g0309631
rosa_laevigata	RLG00000010548
rosa_multiflora	Rmu_co8186100.1_g000001 Rmu_sc0007632.1_g000005 Rmu_sc0008462.1_g000001
rosa_roxburghii	Rroxscaffold_7G00159270
rosa_rugosa	Rorug06G0373200 Rorug06G0373300
rosa_samantha	Rh6AG486900 Rh6BG496500 Rh6CG501200 Rh6DG487400
rosa_wichuraiana	Rw6G042410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2106
AccB7I	CCANNNNNTGG	1 cut(s)	591
AccBSI	CCGCTC	1 cut(s)	956
AccII	CGCG	4 cut(s)	292, 337, 1144, 2003
AclWI	GGATC	9 cut(s)	845, 858, 873, 1103, 1316, 1329, 1539, 1650, 2077
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	8 cut(s)	32, 125, 221, 235, 280, 658, 1136, 1805
AcuI	CTGAAG	2 cut(s)	236, 2099
AdeI	CACNNNGTG	1 cut(s)	388
AfaI	GTAC	2 cut(s)	968, 1403
AfiI	CCNNNNNNNGG	4 cut(s)	114, 295, 591, 1824
AflIII	ACRYGT	1 cut(s)	555
AhdI	GACNNNNNGTC	1 cut(s)	118
AjnI	CCWGG	1 cut(s)	1721
AjuI	GAANNNNNNNTTGG	2 cut(s)	1915, 1947
Alw21I	GWGCWC	2 cut(s)	643, 1103
Alw26I	GTCTC	1 cut(s)	1897
AlwI	GGATC	9 cut(s)	845, 858, 873, 1103, 1316, 1329, 1539, 1650, 2077
AlwNI	CAGNNNCTG	1 cut(s)	1463
Ama87I	CYCGRG	2 cut(s)	572, 1325
AoxI	GGCC	3 cut(s)	91, 297, 1345
ApoI	RAATTY	8 cut(s)	32, 125, 221, 235, 280, 658, 1136, 1805
Asp700I	GAANNNNTTC	2 cut(s)	135, 795
AspLEI	GCGC	4 cut(s)	339, 1453, 2005, 2107
AspS9I	GGNCC	2 cut(s)	105, 1345
AsuC2I	CCSGG	1 cut(s)	939
AsuHPI	GGTGA	1 cut(s)	1174
AsuII	TTCGAA	1 cut(s)	2134
AvaI	CYCGRG	2 cut(s)	572, 1325
AvaII	GGWCC	1 cut(s)	105
BalI	TGGCCA	1 cut(s)	299
BamHI	GGATCC	2 cut(s)	850, 1321
BanII	GRGCYC	1 cut(s)	643
BarI	GAAGNNNNNNTAC	4 cut(s)	396, 428, 2058, 2090
BauI	CACGAG	3 cut(s)	70, 2027, 2108
BbsI	GAAGAC	1 cut(s)	138
Bbv12I	GWGCWC	2 cut(s)	643, 1103
BccI	CCATC	3 cut(s)	289, 957, 1408
BcgI	CGANNNNNNTGC	2 cut(s)	1026, 1060
BciT130I	CCWGG	1 cut(s)	1723
BcnI	CCSGG	1 cut(s)	939
BcoDI	GTCTC	1 cut(s)	1897
BfaI	CTAG	3 cut(s)	102, 198, 321
BfmI	CTRYAG	3 cut(s)	1606, 1938, 1977
BfoI	RGCGCY	1 cut(s)	1454
BlpI	GCTNAGC	2 cut(s)	697, 1467
BmcAI	AGTACT	1 cut(s)	1403
Bme1390I	CCNGG	2 cut(s)	939, 1723
Bme18I	GGWCC	1 cut(s)	105
BmeRI	GACNNNNNGTC	1 cut(s)	118
BmeT110I	CYCGRG	2 cut(s)	572, 1325
BmgT120I	GGNCC	2 cut(s)	105, 1345
BmiI	GGNNCC	4 cut(s)	42, 666, 852, 1323
BmrFI	CCNGG	2 cut(s)	939, 1723
BmrI	ACTGGG	2 cut(s)	124, 360
BmsI	GCATC	6 cut(s)	232, 445, 1366, 1474, 1759, 1935
BmuI	ACTGGG	2 cut(s)	124, 360
BpiI	GAAGAC	1 cut(s)	138
BpmI	CTGGAG	1 cut(s)	2112
Bpu10I	CCTNAGC	2 cut(s)	1426, 1575
Bpu1102I	GCTNAGC	2 cut(s)	697, 1467
Bpu14I	TTCGAA	1 cut(s)	2134
BpuEI	CTTGAG	1 cut(s)	401
BpuMI	CCSGG	1 cut(s)	939
BsaI	GGTCTC	1 cut(s)	1897
BsaJI	CCNNGG	5 cut(s)	290, 300, 653, 1326, 2044
BsaWI	WCCGGW	2 cut(s)	667, 893
BsaXI	ACNNNNNCTCC	2 cut(s)	950, 980
Bsc4I	CCNNNNNNNGG	4 cut(s)	114, 295, 591, 1824
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	4 cut(s)	119, 366, 1966, 2129
Bse3DI	GCAATG	1 cut(s)	1401
BseBI	CCWGG	1 cut(s)	1723
BseDI	CCNNGG	5 cut(s)	290, 300, 653, 1326, 2044
BseGI	GGATG	6 cut(s)	151, 300, 460, 1381, 1489, 1582
BseLI	CCNNNNNNNGG	4 cut(s)	114, 295, 591, 1824
BseMI	GCAATG	1 cut(s)	1401
BseMII	CTCAG	7 cut(s)	758, 1440, 1458, 1561, 1589, 1653, 1677
BseNI	ACTGG	4 cut(s)	119, 366, 1966, 2129
BseRI	GAGGAG	1 cut(s)	53
BsgI	GTGCAG	2 cut(s)	231, 1248
Bsh1236I	CGCG	4 cut(s)	292, 337, 1144, 2003
BshFI	GGCC	3 cut(s)	93, 299, 1347
BsiHKAI	GWGCWC	2 cut(s)	643, 1103
BsiHKCI	CYCGRG	2 cut(s)	572, 1325
BsiSI	CCGG	6 cut(s)	56, 108, 668, 894, 938, 1521
BslFI	GGGAC	3 cut(s)	46, 89, 1742
BslI	CCNNNNNNNGG	4 cut(s)	114, 295, 591, 1824
BsmAI	GTCTC	1 cut(s)	1897
BsmFI	GGGAC	3 cut(s)	46, 89, 1742
BsmI	GAATGC	1 cut(s)	519
BsnI	GGCC	3 cut(s)	93, 299, 1347
Bso31I	GGTCTC	1 cut(s)	1897
BsoBI	CYCGRG	2 cut(s)	572, 1325
Bsp119I	TTCGAA	1 cut(s)	2134
Bsp1286I	GDGCHC	2 cut(s)	643, 1103
Bsp143I	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
Bsp1720I	GCTNAGC	2 cut(s)	697, 1467
Bsp19I	CCATGG	1 cut(s)	653
BspANI	GGCC	3 cut(s)	93, 299, 1347
BspCNI	CTCAG	7 cut(s)	757, 1439, 1459, 1560, 1588, 1654, 1678
BspFNI	CGCG	4 cut(s)	292, 337, 1144, 2003
BspLI	GGNNCC	4 cut(s)	42, 666, 852, 1323
BspMAI	CTGCAG	1 cut(s)	1942
BspPI	GGATC	9 cut(s)	845, 858, 873, 1103, 1316, 1329, 1539, 1650, 2077
BspQI	GCTCTTC	1 cut(s)	939
BspT104I	TTCGAA	1 cut(s)	2134
BspTNI	GGTCTC	1 cut(s)	1897
BsrBI	CCGCTC	1 cut(s)	956
BsrDI	GCAATG	1 cut(s)	1401
BsrFI	RCCGGY	1 cut(s)	107
BsrI	ACTGG	4 cut(s)	119, 366, 1966, 2129
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	5 cut(s)	290, 300, 653, 1326, 2044
BssMI	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
BssSI	CACGAG	3 cut(s)	70, 2027, 2108
BssT1I	CCWWGG	3 cut(s)	300, 653, 2044
Bst2BI	CACGAG	3 cut(s)	70, 2027, 2108
Bst2UI	CCWGG	1 cut(s)	1723
Bst4CI	ACNGT	4 cut(s)	490, 1459, 1624, 1741
Bst6I	CTCTTC	2 cut(s)	939, 1519
BstBI	TTCGAA	1 cut(s)	2134
BstC8I	GCNNGC	8 cut(s)	604, 703, 930, 1039, 1123, 1178, 1420, 1593
BstDEI	CTNAG	8 cut(s)	697, 744, 1426, 1467, 1547, 1575, 1662, 1686
BstDSI	CCRYGG	2 cut(s)	290, 653
BstF5I	GGATG	6 cut(s)	151, 300, 460, 1381, 1489, 1582
BstFNI	CGCG	4 cut(s)	292, 337, 1144, 2003
BstH2I	RGCGCY	1 cut(s)	1454
BstHHI	GCGC	4 cut(s)	339, 1453, 2005, 2107
BstKTI	GATC	8 cut(s)	853, 868, 919, 1111, 1324, 1534, 1645, 2072
BstMAI	GTCTC	1 cut(s)	1897
BstMBI	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
BstMWI	GCNNNNNNNGC	8 cut(s)	52, 331, 345, 540, 626, 702, 1235, 1450
BstNI	CCWGG	1 cut(s)	1723
BstNSI	RCATGY	1 cut(s)	559
BstSCI	CCNGG	2 cut(s)	937, 1721
BstSFI	CTRYAG	3 cut(s)	1606, 1938, 1977
BstUI	CGCG	4 cut(s)	292, 337, 1144, 2003
BstV2I	GAAGAC	1 cut(s)	138
BstX2I	RGATCY	3 cut(s)	850, 1108, 1321
BstYI	RGATCY	3 cut(s)	850, 1108, 1321
BsuRI	GGCC	3 cut(s)	93, 299, 1347
BtgI	CCRYGG	2 cut(s)	290, 653
BtsCI	GGATG	6 cut(s)	151, 300, 460, 1381, 1489, 1582
BtsI	GCAGTG	1 cut(s)	1365
BtsIMutI	CAGTG	2 cut(s)	373, 1365
Cac8I	GCNNGC	8 cut(s)	604, 703, 930, 1039, 1123, 1178, 1420, 1593
CaiI	CAGNNNCTG	1 cut(s)	1463
CfoI	GCGC	4 cut(s)	339, 1453, 2005, 2107
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	2 cut(s)	105, 1345
Cfr42I	CCGCGG	1 cut(s)	293
CseI	GACGC	1 cut(s)	1771
Csp6I	GTAC	2 cut(s)	967, 1402
CviAII	CATG	6 cut(s)	556, 654, 862, 920, 1118, 1186
CviQI	GTAC	2 cut(s)	967, 1402
DdeI	CTNAG	8 cut(s)	697, 744, 1426, 1467, 1547, 1575, 1662, 1686
DpnI	GATC	8 cut(s)	852, 867, 918, 1110, 1323, 1533, 1644, 2071
DpnII	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
DraIII	CACNNNGTG	1 cut(s)	388
DriI	GACNNNNNGTC	1 cut(s)	118
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	2 cut(s)	939, 1519
Eam1105I	GACNNNNNGTC	1 cut(s)	118
EarI	CTCTTC	2 cut(s)	939, 1519
Ecl136II	GAGCTC	1 cut(s)	641
Eco130I	CCWWGG	3 cut(s)	300, 653, 2044
Eco24I	GRGCYC	1 cut(s)	643
Eco31I	GGTCTC	1 cut(s)	1897
Eco47I	GGWCC	1 cut(s)	105
Eco53kI	GAGCTC	1 cut(s)	641
Eco57I	CTGAAG	2 cut(s)	236, 2099
Eco88I	CYCGRG	2 cut(s)	572, 1325
EcoICRI	GAGCTC	1 cut(s)	641
EcoRI	GAATTC	2 cut(s)	221, 1805
EcoRII	CCWGG	1 cut(s)	1721
EcoT14I	CCWWGG	3 cut(s)	300, 653, 2044
EcoT38I	GRGCYC	1 cut(s)	643
ErhI	CCWWGG	3 cut(s)	300, 653, 2044
FaeI	CATG	6 cut(s)	559, 657, 865, 923, 1121, 1189
FaqI	GGGAC	3 cut(s)	46, 89, 1742
FatI	CATG	6 cut(s)	555, 653, 861, 919, 1117, 1185
FauI	CCCGC	2 cut(s)	297, 1719
FokI	GGATG	6 cut(s)	158, 307, 467, 1388, 1496, 1569
FriOI	GRGCYC	1 cut(s)	643
FspBI	CTAG	3 cut(s)	102, 198, 321
FspI	TGCGCA	1 cut(s)	2106
GlaI	GCGC	4 cut(s)	338, 1452, 2004, 2106
GsuI	CTGGAG	1 cut(s)	2112
HaeII	RGCGCY	1 cut(s)	1454
HaeIII	GGCC	3 cut(s)	93, 299, 1347
HapII	CCGG	6 cut(s)	56, 108, 668, 894, 938, 1521
HgaI	GACGC	1 cut(s)	1771
HhaI	GCGC	4 cut(s)	339, 1453, 2005, 2107
Hin1II	CATG	6 cut(s)	559, 657, 865, 923, 1121, 1189
Hin6I	GCGC	4 cut(s)	337, 1451, 2003, 2105
HinP1I	GCGC	4 cut(s)	337, 1451, 2003, 2105
HincII	GTYRAC	1 cut(s)	1786
HindII	GTYRAC	1 cut(s)	1786
HindIII	AAGCTT	3 cut(s)	694, 1987, 2137
HinfI	GANTC	8 cut(s)	59, 119, 155, 494, 1165, 1250, 1277, 1682
HpaII	CCGG	6 cut(s)	56, 108, 668, 894, 938, 1521
HphI	GGTGA	1 cut(s)	1174
Hpy166II	GTNNAC	2 cut(s)	1764, 1786
Hpy188I	TCNGA	9 cut(s)	690, 873, 1048, 1249, 1255, 1408, 1550, 1663, 1687
Hpy188III	TCNNGA	9 cut(s)	18, 482, 524, 611, 854, 1325, 1373, 1428, 1577
Hpy8I	GTNNAC	2 cut(s)	1764, 1786
HpyAV	CCTTC	8 cut(s)	746, 1024, 1083, 1121, 1309, 1894, 2056, 2060
HpyCH4III	ACNGT	4 cut(s)	490, 1459, 1624, 1741
HpyF10VI	GCNNNNNNNGC	8 cut(s)	52, 331, 345, 540, 626, 702, 1235, 1450
HpyF3I	CTNAG	8 cut(s)	697, 744, 1426, 1467, 1547, 1575, 1662, 1686
Hsp92II	CATG	6 cut(s)	559, 657, 865, 923, 1121, 1189
HspAI	GCGC	4 cut(s)	337, 1451, 2003, 2105
KspI	CCGCGG	1 cut(s)	293
Kzo9I	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
LguI	GCTCTTC	1 cut(s)	939
LmnI	GCTCC	5 cut(s)	40, 585, 925, 1088, 2131
LweI	GCATC	6 cut(s)	232, 445, 1366, 1474, 1759, 1935
MaeI	CTAG	3 cut(s)	102, 198, 321
MaeIII	GTNAC	5 cut(s)	747, 889, 1388, 1968, 2073
MalI	GATC	8 cut(s)	852, 867, 918, 1110, 1323, 1533, 1644, 2071
MbiI	CCGCTC	1 cut(s)	956
MboI	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
MboII	GAAGA	8 cut(s)	143, 353, 456, 512, 800, 926, 1039, 1536
MflI	RGATCY	3 cut(s)	850, 1108, 1321
MhlI	GDGCHC	2 cut(s)	643, 1103
MlsI	TGGCCA	1 cut(s)	299
MluNI	TGGCCA	1 cut(s)	299
MlyI	GAGTC	2 cut(s)	68, 128
MmeI	TCCRAC	2 cut(s)	1227, 1418
Mox20I	TGGCCA	1 cut(s)	299
MroXI	GAANNNNTTC	2 cut(s)	135, 795
MscI	TGGCCA	1 cut(s)	299
MseI	TTAA	4 cut(s)	165, 276, 284, 1308
MslI	CAYNNNNRTG	2 cut(s)	140, 767
Msp20I	TGGCCA	1 cut(s)	299
MspA1I	CMGCKG	2 cut(s)	292, 1474
MspI	CCGG	6 cut(s)	56, 108, 668, 894, 938, 1521
MspR9I	CCNGG	2 cut(s)	939, 1723
Mva1269I	GAATGC	1 cut(s)	519
MvaI	CCWGG	1 cut(s)	1723
MvnI	CGCG	4 cut(s)	292, 337, 1144, 2003
MwoI	GCNNNNNNNGC	8 cut(s)	52, 331, 345, 540, 626, 702, 1235, 1450
NciI	CCSGG	1 cut(s)	939
NcoI	CCATGG	1 cut(s)	653
NdeII	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
NlaIII	CATG	6 cut(s)	559, 657, 865, 923, 1121, 1189
NlaIV	GGNNCC	4 cut(s)	42, 666, 852, 1323
NmeAIII	GCCGAG	2 cut(s)	62, 662
NmuCI	GTSAC	1 cut(s)	1968
NsbI	TGCGCA	1 cut(s)	2106
NspI	RCATGY	1 cut(s)	559
NspV	TTCGAA	1 cut(s)	2134
PaeR7I	CTCGAG	1 cut(s)	572
PciI	ACATGT	1 cut(s)	555
PciSI	GCTCTTC	1 cut(s)	939
PctI	GAATGC	1 cut(s)	519
PdmI	GAANNNNTTC	2 cut(s)	135, 795
PfeI	GAWTC	6 cut(s)	155, 494, 1165, 1250, 1277, 1682
PflMI	CCANNNNNTGG	1 cut(s)	591
PfoI	TCCNGGA	1 cut(s)	937
PleI	GAGTC	2 cut(s)	67, 127
PpsI	GAGTC	2 cut(s)	67, 127
PscI	ACATGT	1 cut(s)	555
Psp124BI	GAGCTC	1 cut(s)	643
Psp6I	CCWGG	1 cut(s)	1721
PspGI	CCWGG	1 cut(s)	1721
PspN4I	GGNNCC	4 cut(s)	42, 666, 852, 1323
PspPI	GGNCC	2 cut(s)	105, 1345
PspXI	VCTCGAGB	1 cut(s)	572
PstI	CTGCAG	1 cut(s)	1942
PstNI	CAGNNNCTG	1 cut(s)	1463
PsuI	RGATCY	3 cut(s)	850, 1108, 1321
RsaI	GTAC	2 cut(s)	968, 1403
RsaNI	GTAC	2 cut(s)	967, 1402
RseI	CAYNNNNRTG	2 cut(s)	140, 767
SacI	GAGCTC	1 cut(s)	643
SacII	CCGCGG	1 cut(s)	293
SapI	GCTCTTC	1 cut(s)	939
SaqAI	TTAA	4 cut(s)	165, 276, 284, 1308
Sau3AI	GATC	8 cut(s)	850, 865, 916, 1108, 1321, 1531, 1642, 2069
Sau96I	GGNCC	2 cut(s)	105, 1345
ScaI	AGTACT	1 cut(s)	1403
SchI	GAGTC	2 cut(s)	68, 128
ScrFI	CCNGG	2 cut(s)	939, 1723
SduI	GDGCHC	2 cut(s)	643, 1103
SfaNI	GCATC	6 cut(s)	232, 445, 1366, 1474, 1759, 1935
SfcI	CTRYAG	3 cut(s)	1606, 1938, 1977
Sfr274I	CTCGAG	1 cut(s)	572
Sfr303I	CCGCGG	1 cut(s)	293
SfuI	TTCGAA	1 cut(s)	2134
SgrBI	CCGCGG	1 cut(s)	293
SinI	GGWCC	1 cut(s)	105
SlaI	CTCGAG	1 cut(s)	572
SmiMI	CAYNNNNRTG	2 cut(s)	140, 767
SmlI	CTYRAG	2 cut(s)	416, 572
SmoI	CTYRAG	2 cut(s)	416, 572
SspI	AATATT	1 cut(s)	411
SspMI	CTAG	3 cut(s)	102, 198, 321
SstI	GAGCTC	1 cut(s)	643
StyD4I	CCNGG	2 cut(s)	937, 1721
StyI	CCWWGG	3 cut(s)	300, 653, 2044
TaaI	ACNGT	4 cut(s)	490, 1459, 1624, 1741
TaqI	TCGA	6 cut(s)	36, 573, 1350, 1901, 1934, 2134
TaqII	GACCGA	1 cut(s)	1879
TatI	WGTACW	1 cut(s)	1401
TauI	GCSGC	3 cut(s)	46, 49, 337
TfiI	GAWTC	6 cut(s)	155, 494, 1165, 1250, 1277, 1682
Tru1I	TTAA	4 cut(s)	165, 276, 284, 1308
Tru9I	TTAA	4 cut(s)	165, 276, 284, 1308
TscAI	CASTG	2 cut(s)	373, 1365
TseFI	GTSAC	1 cut(s)	1968
Tsp45I	GTSAC	1 cut(s)	1968
TspDTI	ATGAA	9 cut(s)	162, 833, 918, 1020, 1106, 1174, 1412, 1967, 2012
TspRI	CASTG	2 cut(s)	373, 1365
Van91I	CCANNNNNTGG	1 cut(s)	591
VpaK11BI	GGWCC	1 cut(s)	105
XapI	RAATTY	8 cut(s)	32, 125, 221, 235, 280, 658, 1136, 1805
XceI	RCATGY	1 cut(s)	559
XcmI	CCANNNNNNNNNTGG	2 cut(s)	307, 1205
XhoI	CTCGAG	1 cut(s)	572
XmnI	GAANNNNTTC	2 cut(s)	135, 795
XspI	CTAG	3 cut(s)	102, 198, 321
ZrmI	AGTACT	1 cut(s)	1403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.