FvH4_2g36040
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0006637
Physical Location & Seq
Reverse (-)
26467082 .. 26473858
6777 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g36040.t2

Sequence Viewer

Length: 3252 bp
ATGGACGGTGATAAAAATAGTTATACTCCTACTCCAGCAGGGCCTGGTAGTAGCAGTCTACAGAGAACTCGAACTAGTCACGGGAGGTCTAGTGGGCCTACAAGGCGTTCAACGAAAGGGCAATGGACTCCTGAAGAGGATGAAATCTTGCGTAGGGCAGTTCAGAGTTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGTTTCAAGGACCGGACTGATGTGCAATGCCTGCATAGGTGGCAGAAAGTTTTGAATCCTGAATTGGTCAAGGGTCCATGGTCTAAAGAGGAGGATGAAATCATTGTTGAATTAGTAGAAAAGTATGGCCCAAAAAAGTGGTCAACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGCAGGGAAAGGTGGCATAATCATCTTAATCCTGGCATAAACAAAGAAGCATGGACACAGGAGGAGGAGTTGGCTCTAATTCGTGCTCATCAAATTTATGGGAACAAATGGGCAGAGCTAACAAAATTCTTGCCTGGAAGGACAGACAATGCTATAAAGAATCACTGGAACAGTTCTGTGAAAAAGAAGTTGGATTCTTACTTGAAGTCGGGTTTGCTACCAGACTTTGAAGGAACACCTCATGTTGGACATCAAAACCAACCCATAATCGCATCTTGTTCGAGAGTGCAGAATAGTGGAGATGATAGTGCTCCCAGAGGTGCTGAAGGAGAAGAAAAATCAGAATGCAGTCAAGATTCAACTGTTGCTGGTGGCTTTCAGTCTGCAACTGAAATGGTCAATGTGGTATTAAATACTAGAGATCGGTCACATATCCGTGAAGTGTCCCGATTAGGAAATGACCCAAGCTCCAGTCCAGCGTCCTGTTCAGAACCATATTTCCCGTCTATGGGGGATGCCACTTTTGCCATCCCAGAAATACCTCCTGAACTTGTTAGCTCTTCCAAATTTATAGAGCAAACTTTTGCACATGATGCTGGAGAGTTGATGAGTGGGGATTTCCAGTTTAATATGCAGGAGTTAACTAATATTTCATCACTAGAATCAGGGCAGGAGGCATCCGGGATGCATACCCATTGTATGAGTTCTAATGAGATACATGATGTGGTCAACTTTCCATTTCAAAATGCTAGTGCATTTCCTGCTTCTACTTCCATGGAAAATATGGTGGATGGTTCGATTAAATCAGAGAGGATGTTGATATCCGACGATGAATGTTGCAGGGCTTTGTTTTCTGAGGCAATTAATCAGGGATATTATTTCTCCAGAGAATTTACAAATGGGTCAAGCATGGTTGATTTGATTACATGCACAGAGTCATTTTTACAATCATCATCAAACCTCCAGTTGTCTGAAACCGGTAGATCTTCTCAACCTTATTGTGCTTTGAACTTGGATTTAGTTGGAACTCCATGCTCTCAACCAGTTTCTGCTCATGAGGGTCCACTGATATTTGCTGGAGAGCCTAATCATTTATTCAGAGTCCAAGTACAGGAGTATGTCACAAGTTCAGAGGATGCATTTGTCCACACTAATGACACAGCCAGATCTCCCAGCACTGTTGGTGGAAATAAGACTTTTATGCAAGAGCAATCTCATCTGGTTGAGGATCCTTTAGATTTAGTCCCTGTAAATACATTTGATTCTGGATTGGATACGCAAACTTCTCCAGCTGTGGATGTGAGATCAGATGTGCACACAGAGCAGCAGGATGACAGAGCTTTATGTTATGAGCCTCCTCGTTTTCCAAGTTTGGATATTCCATTTTTAAGTTGTGATCTTGTACAATCAGGAAATGACATGCAACAAGAATATAGTCCCCTTGGAATTCGTCAGCTGATGATGTCCTCTATGAATTGCCTCACTCCATTTAGGTTATGGGATTCACCATCTCGCGATGGTAGCCCTGATGCTGTTCTGAAAAGTGCTGCTAAAACATTTACAGGCACACCATCCATTTTGAAGAAACGGCACCGGGACCTGTTGTCTCCATTGTCGCCATTGTCAGATAGAAGGATTGATAAAAAGCTTGGGACTGATGTGACCTCCAGTTTGGCCAGAGATTTTTCACGTTTAGAGGTAATGTTTGAAGCCAGTGAAACACAGGAGGCACCATCACATTCTCCATCTTCAAATCAGCCGAGGGACTCTGATGGGCATGAAGAAGCTAAAGAGAATATGGATACCTGTGAAACCAGAATAGAAGAAGGGGTTGATACTGATGAAATAGCACAGAAAAATTTTGATGACAGTGAATCCCCAGAAAAGAGGAAGCAAGGAAATGCTGATGTTGATACCTGTGAAACCAGAATAGAAGAAGGGGTTGATACTGATGAAATAGCACAGAAAATTTTTGATGACAGTGAATCCTCAGAAAAGAGGAAGCAAGGAAATGATGTTGATGCTAACACTAATGCTGTCCCCTCTTCTCAGGATGTGCAACAGTCTTCTGGAGTTCTTACAGAACATAACACAAATGATCTGCTATTATATTCTCCTGATCAAGCTGGATGCAAAGCTGAAAAAGCCTTGAGCTTGAGTGCTAAAACTCCAAAAGTTCAGCGTTCTAAATCTTTTTCTGCCAAACAAGGTGCCTCTGTTATTACCCCAACTATAACAGTGAAGAAGCGAGAAAGTTATTTGGTTGCACAGACATGTACACAATCTGATTCGTTGTCAGCCCCTCTGGAAACATGTACCAATAATGCTGGGAATGTTGCTTGTACAGAGACCATGTTTGGTATTACACCACTAAAAAGAAGTATTGATTCTCCTTCAGCATGGAAATCCCCTTCAGCATGGAAATCTCCTTCAGCATGGAAATCCCCCTGGTTTATCAACTCATTCCTTCCTGGTCCAAGGGTTGATACAGAAATATCAATTGAGGATATAGGATTTTTCATGAGCCCAGGAGATAGAAGTTATGATGCCATAGGGTTGATGAAACAGATAAGCGAGCATACTGCTTCTGCATATGCTAATGCCCAGGAAGTTTTGGGAAATGATACTCCTGAATCATTGTTGAAGCAAAGACGGAAAGACCATGACATTATGGACTTGGATAATGATCTTGCACCACCAGATCAGCCGGGAAGTAGTTCCCTTTCCGCTCCAAATGTTATGGTGGAGCGTCGCACCCTGGACTTTAGCGAGTGTGGAACACCCAGTAAGGGAAAGGAAAGCGGAAAATTTTCGAATACTAAAACCTTCTCAAGTCCATCGAGCTATTTGTTGAAGGGATGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006275 GO:0006355 GO:0006357 GO:0008150 GO:0008285 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009623 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0032875 GO:0042127 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0090329 GO:0097159 GO:0140110 GO:1901181 GO:1901363 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04151 ko04218 ko05166 map04151 map04218 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

1084

Amino Acids

119.49

Weight (kDa)

5.08

Isoelectric Point (pI)

61.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_6 PF13921 3 - 57 1.1e-12 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 4 - 42 9.9e-10 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 48 - 94 1.2e-20 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 51 - 110 5.4e-20 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 100 - 143 2.1e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 103 - 148 1e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 1974, 2113, 2594
AccBSI CCGCTC 1 cut(s) 3113
AccI GTMKAC 1 cut(s) 58
AccII CGCG 1 cut(s) 1899
AciI CCGC 3 cut(s) 197, 3111, 3186
AclWI GGATC 2 cut(s) 1607, 1620
AcoI YGGCCR 1 cut(s) 2058
AcsI RAATTY 8 cut(s) 477, 509, 950, 1274, 1830, 2242, 2352, 3191
AcuI CTGAAG 5 cut(s) 153, 729, 2763, 2781, 2799
AfaI GTAC 5 cut(s) 1494, 1788, 2662, 2701, 2728
AfiI CCNNNNNNNGG 5 cut(s) 629, 892, 893, 1495, 3173
AflIII ACRYGT 2 cut(s) 2657, 2696
AgeI ACCGGT 1 cut(s) 1361
AhdI GACNNNNNGTC 1 cut(s) 1987
AhlI ACTAGT 1 cut(s) 74
AjnI CCWGG 9 cut(s) 43, 364, 415, 517, 2831, 2854, 2911, 2988, 3141
AjuI GAANNNNNNNTTGG 4 cut(s) 248, 280, 557, 589
AloI GAACNNNNNNTCC 2 cut(s) 867, 899
Alw21I GWGCWC 3 cut(s) 472, 697, 1701
Alw26I GTCTC 2 cut(s) 1995, 2726
Alw44I GTGCAC 1 cut(s) 1697
AlwI GGATC 2 cut(s) 1607, 1620
AlwNI CAGNNNCTG 2 cut(s) 44, 1433
AoxI GGCC 4 cut(s) 41, 95, 328, 2058
ApaLI GTGCAC 1 cut(s) 1697
ApeKI GCWGC 2 cut(s) 1708, 1931
ApoI RAATTY 8 cut(s) 477, 509, 950, 1274, 1830, 2242, 2352, 3191
ArsI GACNNNNNNTTYG 4 cut(s) 326, 358, 2038, 2070
AseI ATTAAT 1 cut(s) 1248
AsiGI ACCGGT 1 cut(s) 1361
Asp700I GAANNNNTTC 2 cut(s) 3100, 3193
AspS9I GGNCC 8 cut(s) 41, 95, 211, 275, 329, 1445, 1981, 2858
AsuC2I CCSGG 3 cut(s) 1066, 1979, 3093
AsuHPI GGTGA 2 cut(s) 20, 1881
AsuII TTCGAA 1 cut(s) 3197
AvaII GGWCC 5 cut(s) 211, 275, 1445, 1981, 2858
BaeGI GKGCMC 1 cut(s) 1701
BalI TGGCCA 1 cut(s) 2060
BamHI GGATCC 1 cut(s) 1612
BanI GGYRCC 3 cut(s) 1974, 2113, 2594
BanII GRGCYC 1 cut(s) 2912
BbsI GAAGAC 1 cut(s) 2442
Bbv12I GWGCWC 3 cut(s) 472, 697, 1701
BbvI GCAGC 2 cut(s) 1720, 1918
BccI CCATC 9 cut(s) 920, 1169, 1895, 1900, 1963, 2125, 2137, 2150, 3229
BceAI ACGGC 1 cut(s) 1988
BcgI CGANNNNNNTGC 4 cut(s) 645, 679, 2948, 2982
BciT130I CCWGG 9 cut(s) 45, 366, 417, 519, 2833, 2856, 2913, 2990, 3143
BciVI GTATCC 2 cut(s) 1651, 2179
BclI TGATCA 1 cut(s) 2503
BcnI CCSGG 3 cut(s) 1066, 1979, 3093
BcoDI GTCTC 2 cut(s) 1995, 2726
BcuI ACTAGT 1 cut(s) 74
BfaI CTAG 5 cut(s) 75, 90, 801, 1043, 1134
BfmI CTRYAG 1 cut(s) 59
BfuI GTATCC 2 cut(s) 1651, 2179
BglI GCCNNNNNGGC 1 cut(s) 103
BglII AGATCT 2 cut(s) 1367, 1550
BisI GCNGC 2 cut(s) 1709, 1932
BlsI GCNGC 2 cut(s) 1710, 1933
Bme18I GGWCC 5 cut(s) 211, 275, 1445, 1981, 2858
BmeRI GACNNNNNGTC 1 cut(s) 1987
BmgT120I GGNCC 8 cut(s) 41, 95, 211, 275, 329, 1445, 1981, 2858
BmiI GGNNCC 7 cut(s) 276, 1446, 1614, 1976, 1982, 2115, 2596
BmrI ACTGGG 1 cut(s) 3162
BmuI ACTGGG 1 cut(s) 3162
BpiI GAAGAC 1 cut(s) 2442
BpmI CTGGAG 9 cut(s) 18, 838, 1002, 1252, 1331, 1482, 1656, 2035, 2475
Bpu14I TTCGAA 1 cut(s) 3197
BpuEI CTTGAG 3 cut(s) 2554, 2560, 3199
BpuMI CCSGG 3 cut(s) 1066, 1979, 3093
BsaBI GATNNNNATC 1 cut(s) 3069
BsaI GGTCTC 1 cut(s) 2726
BsaJI CCNNGG 9 cut(s) 278, 1158, 1825, 2144, 2831, 2861, 2911, 2988, 3141
BsaWI WCCGGW 2 cut(s) 213, 1361
BsaXI ACNNNNNCTCC 8 cut(s) 16, 46, 76, 106, 437, 467, 836, 866
Bsc4I CCNNNNNNNGG 5 cut(s) 629, 892, 893, 1495, 3173
Bse118I RCCGGY 1 cut(s) 1361
Bse1I ACTGG 8 cut(s) 554, 855, 1006, 1348, 1427, 2052, 2097, 3168
Bse3DI GCAATG 3 cut(s) 128, 233, 389
Bse8I GATNNNNATC 1 cut(s) 3069
BseBI CCWGG 9 cut(s) 45, 366, 417, 519, 2833, 2856, 2913, 2990, 3143
BseDI CCNNGG 9 cut(s) 278, 1158, 1825, 2144, 2831, 2861, 2911, 2988, 3141
BseJI GATNNNNATC 1 cut(s) 3069
BseLI CCNNNNNNNGG 5 cut(s) 629, 892, 893, 1495, 3173
BseMI GCAATG 3 cut(s) 128, 233, 389
BseMII CTCAG 3 cut(s) 1230, 2388, 2447
BseNI ACTGG 8 cut(s) 554, 855, 1006, 1348, 1427, 2052, 2097, 3168
BseRI GAGGAG 4 cut(s) 305, 461, 464, 1731
BseSI GKGCMC 1 cut(s) 1701
BseXI GCAGC 2 cut(s) 1720, 1918
BseYI CCCAGC 2 cut(s) 1556, 2711
BsgI GTGCAG 1 cut(s) 692
Bsh1236I CGCG 1 cut(s) 1899
BshFI GGCC 4 cut(s) 43, 97, 330, 2060
BshNI GGYRCC 3 cut(s) 1974, 2113, 2594
BshTI ACCGGT 1 cut(s) 1361
BsiHKAI GWGCWC 3 cut(s) 472, 697, 1701
BsiSI CCGG 5 cut(s) 214, 1065, 1362, 1978, 3092
BslFI GGGAC 7 cut(s) 814, 1613, 1806, 1994, 2050, 2162, 2408
BslI CCNNNNNNNGG 5 cut(s) 629, 892, 893, 1495, 3173
BsmAI GTCTC 2 cut(s) 1995, 2726
BsmFI GGGAC 7 cut(s) 814, 1613, 1806, 1994, 2050, 2162, 2408
BsmI GAATGC 1 cut(s) 734
BsnI GGCC 4 cut(s) 43, 97, 330, 2060
Bso31I GGTCTC 1 cut(s) 2726
Bsp119I TTCGAA 1 cut(s) 3197
Bsp1286I GDGCHC 4 cut(s) 472, 697, 1701, 2912
Bsp1407I TGTACA 3 cut(s) 1786, 2660, 2726
Bsp19I CCATGG 2 cut(s) 278, 1158
Bsp68I TCGCGA 1 cut(s) 1899
BspACI CCGC 3 cut(s) 197, 3111, 3186
BspANI GGCC 4 cut(s) 43, 97, 330, 2060
BspCNI CTCAG 3 cut(s) 1231, 2387, 2446
BspFNI CGCG 1 cut(s) 1899
BspHI TCATGA 2 cut(s) 1438, 2904
BspLI GGNNCC 7 cut(s) 276, 1446, 1614, 1976, 1982, 2115, 2596
BspPI GGATC 2 cut(s) 1607, 1620
BspQI GCTCTTC 1 cut(s) 949
BspT104I TTCGAA 1 cut(s) 3197
BspT107I GGYRCC 3 cut(s) 1974, 2113, 2594
BspTNI GGTCTC 1 cut(s) 2726
BsrBI CCGCTC 1 cut(s) 3113
BsrDI GCAATG 3 cut(s) 128, 233, 389
BsrFI RCCGGY 1 cut(s) 1361
BsrGI TGTACA 3 cut(s) 1786, 2660, 2726
BsrI ACTGG 8 cut(s) 554, 855, 1006, 1348, 1427, 2052, 2097, 3168
BssAI RCCGGY 1 cut(s) 1361
BssECI CCNNGG 9 cut(s) 278, 1158, 1825, 2144, 2831, 2861, 2911, 2988, 3141
BssT1I CCWWGG 4 cut(s) 278, 1158, 1825, 2861
Bst2UI CCWGG 9 cut(s) 45, 366, 417, 519, 2833, 2856, 2913, 2990, 3143
Bst4CI ACNGT 8 cut(s) 8, 557, 748, 1564, 2255, 2366, 2448, 2623
Bst6I CTCTTC 3 cut(s) 129, 949, 2434
BstAPI GCANNNNNTGC 3 cut(s) 232, 977, 1145
BstAUI TGTACA 3 cut(s) 1786, 2660, 2726
BstBI TTCGAA 1 cut(s) 3197
BstC8I GCNNGC 2 cut(s) 233, 2960
BstDEI CTNAG 3 cut(s) 1239, 2374, 2433
BstDSI CCRYGG 2 cut(s) 278, 1158
BstFNI CGCG 1 cut(s) 1899
BstMAI GTCTC 2 cut(s) 1995, 2726
BstMWI GCNNNNNNNGC 9 cut(s) 103, 232, 241, 908, 977, 1145, 1705, 1905, 2528
BstNI CCWGG 9 cut(s) 45, 366, 417, 519, 2833, 2856, 2913, 2990, 3143
BstNSI RCATGY 4 cut(s) 1314, 1807, 2661, 2700
BstSFI CTRYAG 1 cut(s) 59
BstSLI GKGCMC 1 cut(s) 1701
BstUI CGCG 1 cut(s) 1899
BstV1I GCAGC 2 cut(s) 1720, 1918
BstV2I GAAGAC 1 cut(s) 2442
BstX2I RGATCY 3 cut(s) 1367, 1550, 1612
BstXI CCANNNNNNTGG 1 cut(s) 339
BstYI RGATCY 3 cut(s) 1367, 1550, 1612
BsuI GTATCC 2 cut(s) 1651, 2179
BsuRI GGCC 4 cut(s) 43, 97, 330, 2060
BtgI CCRYGG 2 cut(s) 278, 1158
BtgZI GCGATG 1 cut(s) 1914
BtsIMutI CAGTG 7 cut(s) 547, 1448, 1560, 2104, 2260, 2371, 2628
BtuMI TCGCGA 1 cut(s) 1899
Cac8I GCNNGC 2 cut(s) 233, 2960
CaiI CAGNNNCTG 2 cut(s) 44, 1433
CciI TCATGA 2 cut(s) 1438, 2904
Cfr10I RCCGGY 1 cut(s) 1361
Cfr13I GGNCC 8 cut(s) 41, 95, 211, 275, 329, 1445, 1981, 2858
CseI GACGC 2 cut(s) 852, 3122
Csp6I GTAC 5 cut(s) 1493, 1787, 2661, 2700, 2727
CspAI ACCGGT 1 cut(s) 1361
CviQI GTAC 5 cut(s) 1493, 1787, 2661, 2700, 2727
DdeI CTNAG 3 cut(s) 1239, 2374, 2433
DraI TTTAAA 1 cut(s) 172
DriI GACNNNNNGTC 1 cut(s) 1987
EaeI YGGCCR 1 cut(s) 2058
Eam1104I CTCTTC 3 cut(s) 129, 949, 2434
Eam1105I GACNNNNNGTC 1 cut(s) 1987
EarI CTCTTC 3 cut(s) 129, 949, 2434
Eco130I CCWWGG 4 cut(s) 278, 1158, 1825, 2861
Eco24I GRGCYC 1 cut(s) 2912
Eco31I GGTCTC 1 cut(s) 2726
Eco32I GATATC 1 cut(s) 1206
Eco47I GGWCC 5 cut(s) 211, 275, 1445, 1981, 2858
Eco57I CTGAAG 5 cut(s) 153, 729, 2763, 2781, 2799
EcoO109I RGGNCCY 2 cut(s) 41, 1981
EcoRI GAATTC 1 cut(s) 1830
EcoRII CCWGG 9 cut(s) 43, 364, 415, 517, 2831, 2854, 2911, 2988, 3141
EcoRV GATATC 1 cut(s) 1206
EcoT14I CCWWGG 4 cut(s) 278, 1158, 1825, 2861
EcoT22I ATGCAT 2 cut(s) 1074, 1525
EcoT38I GRGCYC 1 cut(s) 2912
ErhI CCWWGG 4 cut(s) 278, 1158, 1825, 2861
FaqI GGGAC 7 cut(s) 814, 1613, 1806, 1994, 2050, 2162, 2408
FauNDI CATATG 1 cut(s) 2977
FbaI TGATCA 1 cut(s) 2503
FblI GTMKAC 1 cut(s) 58
Fnu4HI GCNGC 2 cut(s) 1709, 1932
FriOI GRGCYC 1 cut(s) 2912
Fsp4HI GCNGC 2 cut(s) 1709, 1932
FspBI CTAG 5 cut(s) 75, 90, 801, 1043, 1134
GluI GCNGC 2 cut(s) 1709, 1932
GsaI CCCAGC 2 cut(s) 1560, 2715
GsuI CTGGAG 9 cut(s) 18, 838, 1002, 1252, 1331, 1482, 1656, 2035, 2475
HaeIII GGCC 4 cut(s) 43, 97, 330, 2060
HapII CCGG 5 cut(s) 214, 1065, 1362, 1978, 3092
HgaI GACGC 2 cut(s) 852, 3122
HincII GTYRAC 3 cut(s) 345, 1026, 1114
HindII GTYRAC 3 cut(s) 345, 1026, 1114
HindIII AAGCTT 1 cut(s) 2030
HpaI GTTAAC 1 cut(s) 1026
HpaII CCGG 5 cut(s) 214, 1065, 1362, 1978, 3092
HphI GGTGA 2 cut(s) 20, 1881
Hpy166II GTNNAC 8 cut(s) 59, 345, 1026, 1114, 1448, 1531, 1699, 2663
Hpy8I GTNNAC 8 cut(s) 59, 345, 1026, 1114, 1448, 1531, 1699, 2663
Hpy99I CGWCG 2 cut(s) 1214, 3138
HpyCH4III ACNGT 8 cut(s) 8, 557, 748, 1564, 2255, 2366, 2448, 2623
HpyCH4IV ACGT 2 cut(s) 370, 2074
HpyF10VI GCNNNNNNNGC 9 cut(s) 103, 232, 241, 908, 977, 1145, 1705, 1905, 2528
HpyF3I CTNAG 3 cut(s) 1239, 2374, 2433
HpySE526I ACGT 2 cut(s) 370, 2074
Ksp22I TGATCA 1 cut(s) 2503
KspAI GTTAAC 1 cut(s) 1026
LguI GCTCTTC 1 cut(s) 949
LmnI GCTCC 4 cut(s) 700, 857, 3118, 3130
Lsp1109I GCAGC 2 cut(s) 1720, 1918
MaeI CTAG 5 cut(s) 75, 90, 801, 1043, 1134
MaeII ACGT 2 cut(s) 370, 2074
MaeIII GTNAC 4 cut(s) 77, 810, 1504, 2044
MbiI CCGCTC 1 cut(s) 3113
MfeI CAATTG 1 cut(s) 2883
MflI RGATCY 3 cut(s) 1367, 1550, 1612
MhlI GDGCHC 4 cut(s) 472, 697, 1701, 2912
MlsI TGGCCA 1 cut(s) 2060
MluNI TGGCCA 1 cut(s) 2060
MlyI GAGTC 4 cut(s) 121, 1328, 1494, 2144
MmeI TCCRAC 4 cut(s) 555, 610, 1233, 1387
Mox20I TGGCCA 1 cut(s) 2060
Mph1103I ATGCAT 2 cut(s) 1074, 1525
MroXI GAANNNNTTC 2 cut(s) 3100, 3193
MscI TGGCCA 1 cut(s) 2060
MseI TTAA 8 cut(s) 171, 411, 794, 1011, 1025, 1185, 1248, 1772
MslI CAYNNNNRTG 3 cut(s) 819, 1536, 2656
Msp20I TGGCCA 1 cut(s) 2060
MspA1I CMGCKG 2 cut(s) 1676, 1840
MspI CCGG 5 cut(s) 214, 1065, 1362, 1978, 3092
MunI CAATTG 1 cut(s) 2883
Mva1269I GAATGC 1 cut(s) 734
MvaI CCWGG 9 cut(s) 45, 366, 417, 519, 2833, 2856, 2913, 2990, 3143
MvnI CGCG 1 cut(s) 1899
MwoI GCNNNNNNNGC 9 cut(s) 103, 232, 241, 908, 977, 1145, 1705, 1905, 2528
NciI CCSGG 3 cut(s) 1066, 1979, 3093
NcoI CCATGG 2 cut(s) 278, 1158
NdeI CATATG 1 cut(s) 2977
NlaIV GGNNCC 7 cut(s) 276, 1446, 1614, 1976, 1982, 2115, 2596
NmeAIII GCCGAG 1 cut(s) 2169
NmuCI GTSAC 4 cut(s) 77, 810, 1504, 2044
NruI TCGCGA 1 cut(s) 1899
NsiI ATGCAT 2 cut(s) 1074, 1525
NspI RCATGY 4 cut(s) 1314, 1807, 2661, 2700
NspV TTCGAA 1 cut(s) 3197
PagI TCATGA 2 cut(s) 1438, 2904
PciI ACATGT 2 cut(s) 2657, 2696
PciSI GCTCTTC 1 cut(s) 949
PctI GAATGC 1 cut(s) 734
PdmI GAANNNNTTC 2 cut(s) 3100, 3193
PfoI TCCNGGA 1 cut(s) 1064
PinAI ACCGGT 1 cut(s) 1361
PkrI GCNGC 2 cut(s) 1710, 1933
PleI GAGTC 4 cut(s) 121, 1327, 1493, 2144
PpsI GAGTC 4 cut(s) 121, 1327, 1493, 2144
PpuMI RGGWCCY 1 cut(s) 1981
PscI ACATGT 2 cut(s) 2657, 2696
PshBI ATTAAT 1 cut(s) 1248
Psp5II RGGWCCY 1 cut(s) 1981
Psp6I CCWGG 9 cut(s) 43, 364, 415, 517, 2831, 2854, 2911, 2988, 3141
PspFI CCCAGC 2 cut(s) 1556, 2711
PspGI CCWGG 9 cut(s) 43, 364, 415, 517, 2831, 2854, 2911, 2988, 3141
PspN4I GGNNCC 7 cut(s) 276, 1446, 1614, 1976, 1982, 2115, 2596
PspPI GGNCC 8 cut(s) 41, 95, 211, 275, 329, 1445, 1981, 2858
PspPPI RGGWCCY 1 cut(s) 1981
PstNI CAGNNNCTG 2 cut(s) 44, 1433
PsuI RGATCY 3 cut(s) 1367, 1550, 1612
PvuII CAGCTG 2 cut(s) 1676, 1840
RruI TCGCGA 1 cut(s) 1899
RsaI GTAC 5 cut(s) 1494, 1788, 2662, 2701, 2728
RsaNI GTAC 5 cut(s) 1493, 1787, 2661, 2700, 2727
RseI CAYNNNNRTG 3 cut(s) 819, 1536, 2656
SapI GCTCTTC 1 cut(s) 949
SaqAI TTAA 8 cut(s) 171, 411, 794, 1011, 1025, 1185, 1248, 1772
SatI GCNGC 2 cut(s) 1709, 1932
Sau96I GGNCC 8 cut(s) 41, 95, 211, 275, 329, 1445, 1981, 2858
SchI GAGTC 4 cut(s) 121, 1328, 1494, 2144
SduI GDGCHC 4 cut(s) 472, 697, 1701, 2912
SfcI CTRYAG 1 cut(s) 59
SfuI TTCGAA 1 cut(s) 3197
SinI GGWCC 5 cut(s) 211, 275, 1445, 1981, 2858
SmiMI CAYNNNNRTG 3 cut(s) 819, 1536, 2656
SmlI CTYRAG 3 cut(s) 2533, 2539, 3214
SmoI CTYRAG 3 cut(s) 2533, 2539, 3214
SpeI ACTAGT 1 cut(s) 74
SsiI CCGC 3 cut(s) 197, 3111, 3186
SspI AATATT 1 cut(s) 1033
SspMI CTAG 5 cut(s) 75, 90, 801, 1043, 1134
StyI CCWWGG 4 cut(s) 278, 1158, 1825, 2861
TaaI ACNGT 8 cut(s) 8, 557, 748, 1564, 2255, 2366, 2448, 2623
TaiI ACGT 2 cut(s) 373, 2077
TaqI TCGA 5 cut(s) 70, 665, 1181, 3197, 3224
TaqII GACCGA 1 cut(s) 798
TatI WGTACW 4 cut(s) 1492, 1786, 2660, 2726
Tru1I TTAA 8 cut(s) 171, 411, 794, 1011, 1025, 1185, 1248, 1772
Tru9I TTAA 8 cut(s) 171, 411, 794, 1011, 1025, 1185, 1248, 1772
TscAI CASTG 7 cut(s) 554, 1455, 1567, 2104, 2260, 2371, 2628
TseFI GTSAC 4 cut(s) 77, 810, 1504, 2044
TseI GCWGC 2 cut(s) 1708, 1931
Tsp45I GTSAC 4 cut(s) 77, 810, 1504, 2044
TspGWI ACGGA 2 cut(s) 809, 3052
TspRI CASTG 7 cut(s) 554, 1455, 1567, 2104, 2260, 2371, 2628
VneI GTGCAC 1 cut(s) 1697
VpaK11BI GGWCC 5 cut(s) 211, 275, 1445, 1981, 2858
VspI ATTAAT 1 cut(s) 1248
XapI RAATTY 8 cut(s) 477, 509, 950, 1274, 1830, 2242, 2352, 3191
XceI RCATGY 4 cut(s) 1314, 1807, 2661, 2700
XcmI CCANNNNNNNNNTGG 2 cut(s) 1165, 1878
XmiI GTMKAC 1 cut(s) 58
XmnI GAANNNNTTC 2 cut(s) 3100, 3193
XspI CTAG 5 cut(s) 75, 90, 801, 1043, 1134
Zsp2I ATGCAT 2 cut(s) 1074, 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.