MD15G1097000.v1.1
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0006637
Physical Location & Seq
Reverse (-)
6766781 .. 6772638
5858 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1097000.v1.1.491

Sequence Viewer

Length: 3123 bp
ATGGAAGGTGAAAGAACAAATTCTACTCCTTCGGAAGGGCTCGGTGACAGCATTCAGAAAGTTCGAGCTCTCCATGGGAGGACTAGTGGGCCTACAAGGCGTTCTACGAAAGGACAATGGACACCTGAAGAGGATGAGATCTTGCGGAGGGCTGTTCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATCGGACTGATGTGCAATGCCTACATAGATGGCAGAAAGTCTTGAATCCCGAACTGGTCAAAGGTCCATGGTCTAAAGAGGAGGATGAAGTTATTATTGAGTTGGTGAAAAAATATGGTCCAAAAAAGTGGTCCACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAGTGTCGGGAAAGGTGGCATAATCATCTTAATCCTGGCATAAACAAAGAGGCATGGACACAGGAAGAGGAGTTGGCTCTGATACGTGCTCATCAAATGTATGGGAACAAATGGGCAGAGCTAACGAAGTTCTTGCCTGGAAGGACAGACAATTCTATAAAAAATCACTGGAACAGTTCTGTGAAGAAGAAGTTGGATTCTTACTTGAAATCGGGTTTGCTTACACAGTTTCAAGGGATGCCTCATGTTGGAAATCAAAACCAACACATGATGTCATCTTCTTCAAGAATGCAGAGCAGTGGAGATGATAGTGGTGCCAAAGGTGCAGAAGTAGAAGAAATTTCAGAATGCAGTCAAGATTCAACTGTTGCTGGTCACTATCTCTCAGCACCTGAAATGGCCAATGTGGTACCACATACTAGAGAGGAGTTTGGGAATAATGATGTTTCCCGTTTAGCGAATGACCCAAGCTGCAGTCCAGCATCTTGTTCAGAACCATACTACCCATCTATGACTATAGGAGATGCCAATTTTTCCGTTCCAGAAATACCTCCTGAATTGGTTTGCTCCAAATTCCTGGAACAAAATTTCTCACATGATGCTGGAGCTTCGATGGGTGGGGATTTCCAGTTAAATTTGCATGAGTTACCTAACATTTCTTCACTGGAATGCGGCCAGGAATCATCAAGCATGTACACTCATTGTATGAGGTCTAATGAGAGCCATGAAGGGGTGGAGGCTCCATTTCAAACTTCAACTTCCATGGGTAACATGGCCTTCGGTTCAGTTAAATCAGAGCACATGTTGATATCTGACGATGAATGCTGTAGGGCATTATTTTCAATGAATGGTGGGTGTTTTCCCTCTAGAGATTTTACAAATTGCTCAAACATAGTTGATTTGGGTGCTTGCACAGATTCAGTACTTCTCCAACCCGCAAACCTCCAAATATCTGAAATTGGCAGACCTTCAGCTTCACAATCATATCAACCCCTGAATTCTGCTGTAATTGGAACTTCTTGCTCTCAAGTAGTTTCTGCTTATGAAAATCCACTGATATATGCTGGAGAACCTACTCATTTATTCAGAGTTCAAGACCAAGAGTTTGTGACAAGTTTAAATGATGGATTTATCTATAATAACGAGTCTGCCAGTTCTCCCTGCAAATCAGATCTGGTTAATGATTCTTCAAAATTAGTCCCTGTAAATACATTTGGTTCGGGATTGGATGCGCAAACTTGTCCTGTGGACGTGAGTTCAAATGAGCAGACAGAACAGCAGGATGATGGAAAAGAACAGCAGGATGCTGGAGCTCTATGTTATGAGCCTCCTCGCTTTCCAAGCTTGGATATTCCATTTTTTAGTTGTGATCTTATACAATCTTGTAATGACATGCAGCAAGAATATAGTCCCCTTGGCATTCGTCAGCTGATGATGTCTTCTATGAATTGCCTCACTCCCTATAGGTTATGGGATTCACCCTCTCGTGAGGGTAGCCCTGATGCCTTGCTAAAAAGTGCTGCTAAAACTTTTACAGGCACACCATCTATTTTGAAGAAACGACACCGAGATTTATTGTCTCCATTGTCGCCATTATCAGATAGAAGAATTGATAAAAGGCTTGGGACTGACGTGACCTCCTGCTTGGCCAGAGATTTTTCACGTCTAGATGTTATGTTTGAAGACACTGAGAAGAAAGAAGATTCCCTTTCTCCATCTTCTGATCAGAAAAGAAATTCTGATGCCTCTGGTGAAAATAAAGAGAATAAGGGTACCTGTGAAAACAAAGTAGAAAAAGGGATTGACAGCACTGCAATGTCAGATGATGGAACTGCACAGAGAGATTTTGATGACGGTCAATCCCGGGAAAAGGGAAAGCAGTTCCAACAAACTGCTGATGTTGATGCTAAGAGTAAGGTTGATGTCGTCCCAACTACACAAAGTGCACAACCTTCTGGAGTACTTGTTGAACGTAACACAAATGATCTACTACTAAATTCTCCTGATGTAGTTGGATGTAAAGCTGAAAAACCCTTCAGCTCAACTGCTAGAACTCCTAAAGAACAGTTACGTAAAAGCTTTGAAGCCCCCAACCCAGGAGTTCCTTCTAAATCTCTTTCTGCAAGACAATGCTCATCTGTTAAAACCCCCACTATATGCGTAAAGAAGCATGGAATTCTCGCAGATAAATGTGTACAGTCTGATTCTACGTCAGCTCCACCAGAGACTGATAGTGCCGGCAATGATGTCAATATTGAAAGCATGTTTGGTGGTACTCCTTTTAAGAGAAGTATCGAATCTCCTTCGGCATGGAAATCTCCTTGGTTCATCAACTCCTTTGTCCCCGGCCCTAGAGTTGATACTGAAATTACAATTGAGGATATAGGGTTTTTCATGAGCCCGGGGGAGAGAAGCTACGATGCCATTGGGCTGATGAAACAGATAAGTGAGCAGACTGCTGCTGCCTATGCCAATGCCCAGGAGGTGTTGGGAAATGAAACTCCTGAAAGTTTATTCCGGGAAAGACAGAAAGACCGAGATATTGCGGGCCCTGAGAACAAGCAGGGGTCGCCTAATCAGCCAGGGAGTAGTTCTCTTTCGGCTTCCAATGTTTCGGTGGAGTGTCGCACCCTCGACTTTAGCGAATGCGGGACGCCCGGGAAGAAGGGAACAGAAAACGTAAAGTCTTCCTCAAATGCCAAGAGCTTTTCGAGTCCGACTTCGTATTTGTTGAAGGGTTGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006275 GO:0006355 GO:0006357 GO:0008150 GO:0008285 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009623 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0032875 GO:0042127 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0090329 GO:0097159 GO:0140110 GO:1901181 GO:1901363 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04151 ko04218 ko05166 map04151 map04218 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

1041

Amino Acids

114.24

Weight (kDa)

5.35

Isoelectric Point (pI)

59.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 37 - 83 4e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 40 - 98 1.4e-17 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 89 - 135 6.8e-20 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 92 - 151 9.5e-20 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 141 - 184 2e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 144 - 189 1.1e-08 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1608
Acc65I GGTACC 2 cut(s) 784, 2147
AccB1I GGYRCC 3 cut(s) 689, 784, 2147
AciI CCGC 6 cut(s) 145, 191, 1047, 1311, 2921, 3024
AclWI GGATC 1 cut(s) 213
AcoI YGGCCR 3 cut(s) 774, 1048, 2022
AcsI RAATTY 9 cut(s) 19, 714, 947, 961, 1009, 1372, 2110, 2371, 2550
AcuI CTGAAG 3 cut(s) 147, 1329, 2395
AcyI GRCGYC 1 cut(s) 3029
AdeI CACNNNGTG 1 cut(s) 2318
AfaI GTAC 7 cut(s) 786, 1070, 1299, 2149, 2337, 2571, 2650
AfiI CCNNNNNNNGG 5 cut(s) 35, 623, 1105, 2245, 2471
AflIII ACRYGT 1 cut(s) 1176
AhlI ACTAGT 1 cut(s) 83
AjiI CACGTC 3 cut(s) 1627, 2008, 2039
AjnI CCWGG 8 cut(s) 358, 409, 511, 951, 1050, 2470, 2853, 2956
AjuI GAANNNNNNNTTGG 4 cut(s) 551, 583, 2625, 2657
Alw21I GWGCWC 5 cut(s) 70, 466, 1176, 1690, 2323
Alw26I GTCTC 2 cut(s) 1959, 2594
Alw44I GTGCAC 1 cut(s) 2319
AlwI GGATC 1 cut(s) 213
AlwNI CAGNNNCTG 2 cut(s) 767, 2603
Ama87I CYCGRG 3 cut(s) 2238, 2776, 3032
AoxI GGCC 7 cut(s) 89, 774, 1048, 1149, 2022, 2722, 2923
ApaI GGGCCC 1 cut(s) 2927
ApaLI GTGCAC 1 cut(s) 2319
ApeKI GCWGC 5 cut(s) 846, 1771, 1895, 2834, 2837
ApoI RAATTY 9 cut(s) 19, 714, 947, 961, 1009, 1372, 2110, 2371, 2550
ArsI GACNNNNNNTTYG 6 cut(s) 320, 352, 1463, 1495, 3085, 3117
Asp700I GAANNNNTTC 1 cut(s) 19
Asp718I GGTACC 2 cut(s) 784, 2147
AspLEI GCGC 1 cut(s) 1609
AspS9I GGNCC 7 cut(s) 89, 269, 323, 336, 2723, 2923, 2924
AsuC2I CCSGG 8 cut(s) 2239, 2240, 2721, 2777, 2778, 2894, 3033, 3034
AsuHPI GGTGA 5 cut(s) 20, 56, 322, 1845, 2138
AvaI CYCGRG 3 cut(s) 2238, 2776, 3032
AvaII GGWCC 3 cut(s) 269, 323, 336
BaeGI GKGCMC 2 cut(s) 2323, 2927
BalI TGGCCA 2 cut(s) 776, 2024
BanI GGYRCC 3 cut(s) 689, 784, 2147
BanII GRGCYC 5 cut(s) 42, 70, 1690, 2777, 2927
BauI CACGAG 1 cut(s) 1860
BbsI GAAGAC 3 cut(s) 1806, 2064, 3054
Bbv12I GWGCWC 5 cut(s) 70, 466, 1176, 1690, 2323
BbvI GCAGC 5 cut(s) 833, 1783, 1882, 2821, 2824
BccI CCATC 8 cut(s) 228, 889, 982, 1493, 1655, 1927, 2098, 2195
BcgI CGANNNNNNTGC 2 cut(s) 490, 524
BciT130I CCWGG 8 cut(s) 360, 411, 513, 953, 1052, 2472, 2855, 2958
BclI TGATCA 1 cut(s) 2098
BcnI CCSGG 8 cut(s) 2239, 2240, 2721, 2777, 2778, 2894, 3033, 3034
BcoDI GTCTC 2 cut(s) 1959, 2594
BcuI ACTAGT 1 cut(s) 83
BfaI CTAG 6 cut(s) 84, 795, 1242, 2042, 2424, 2727
BfmI CTRYAG 4 cut(s) 847, 891, 1201, 1837
BglI GCCNNNNNGGC 1 cut(s) 97
BglII AGATCT 2 cut(s) 138, 1546
BisI GCNGC 6 cut(s) 847, 1048, 1772, 1896, 2835, 2838
BlsI GCNGC 6 cut(s) 848, 1049, 1773, 1897, 2836, 2839
BmcAI AGTACT 2 cut(s) 1299, 2337
Bme18I GGWCC 3 cut(s) 269, 323, 336
BmeT110I CYCGRG 3 cut(s) 2238, 2776, 3032
BmgBI CACGTC 3 cut(s) 1627, 2008, 2039
BmgT120I GGNCC 7 cut(s) 89, 269, 323, 336, 2723, 2923, 2924
BmiI GGNNCC 5 cut(s) 691, 786, 1116, 2149, 2925
BpiI GAAGAC 3 cut(s) 1806, 2064, 3054
BplI GAGNNNNNCTC 2 cut(s) 2953, 2985
BpmI CTGGAG 4 cut(s) 999, 1461, 1704, 2352
BpuEI CTTGAG 1 cut(s) 1386
BpuMI CCSGG 8 cut(s) 2239, 2240, 2721, 2777, 2778, 2894, 3033, 3034
BsaAI YACGTR 2 cut(s) 461, 2447
BsaHI GRCGYC 1 cut(s) 3029
BsaXI ACNNNNNCTCC 8 cut(s) 70, 100, 1997, 2027, 2325, 2355, 2575, 2605
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 623, 1105, 2245, 2471
Bse118I RCCGGY 1 cut(s) 2612
Bse1I ACTGG 5 cut(s) 264, 548, 1003, 1044, 1527
Bse3DI GCAATG 3 cut(s) 227, 2196, 2623
BseBI CCWGG 8 cut(s) 360, 411, 513, 953, 1052, 2472, 2855, 2958
BseGI GGATG 7 cut(s) 139, 295, 618, 1609, 1663, 1684, 2396
BseLI CCNNNNNNNGG 5 cut(s) 35, 623, 1105, 2245, 2471
BseMI GCAATG 3 cut(s) 227, 2196, 2623
BseMII CTCAG 3 cut(s) 774, 2055, 2919
BseNI ACTGG 5 cut(s) 264, 548, 1003, 1044, 1527
BseRI GAGGAG 4 cut(s) 299, 458, 815, 1695
BseSI GKGCMC 2 cut(s) 2323, 2927
BseXI GCAGC 5 cut(s) 833, 1783, 1882, 2821, 2824
BsgI GTGCAG 2 cut(s) 720, 2193
BshFI GGCC 7 cut(s) 91, 776, 1050, 1151, 2024, 2724, 2925
BshNI GGYRCC 3 cut(s) 689, 784, 2147
BsiHKAI GWGCWC 5 cut(s) 70, 466, 1176, 1690, 2323
BsiHKCI CYCGRG 3 cut(s) 2238, 2776, 3032
BsiSI CCGG 6 cut(s) 2239, 2613, 2721, 2777, 2893, 3033
BslFI GGGAC 6 cut(s) 1559, 1770, 2014, 2288, 2702, 3040
BslI CCNNNNNNNGG 5 cut(s) 35, 623, 1105, 2245, 2471
BsmAI GTCTC 2 cut(s) 1959, 2594
BsmFI GGGAC 6 cut(s) 1559, 1770, 2014, 2288, 2702, 3040
BsmI GAATGC 7 cut(s) 51, 669, 728, 1049, 1202, 1794, 3026
BsnI GGCC 7 cut(s) 91, 776, 1050, 1151, 2024, 2724, 2925
BsoBI CYCGRG 3 cut(s) 2238, 2776, 3032
Bsp120I GGGCCC 1 cut(s) 2923
Bsp1286I GDGCHC 8 cut(s) 42, 70, 466, 1176, 1690, 2323, 2777, 2927
Bsp1407I TGTACA 2 cut(s) 1068, 2569
Bsp143I GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
Bsp19I CCATGG 3 cut(s) 73, 272, 1137
BspACI CCGC 6 cut(s) 145, 191, 1047, 1311, 2921, 3024
BspANI GGCC 7 cut(s) 91, 776, 1050, 1151, 2024, 2724, 2925
BspCNI CTCAG 3 cut(s) 773, 2056, 2920
BspHI TCATGA 1 cut(s) 2769
BspLI GGNNCC 5 cut(s) 691, 786, 1116, 2149, 2925
BspMAI CTGCAG 1 cut(s) 851
BspPI GGATC 1 cut(s) 213
BspT107I GGYRCC 3 cut(s) 689, 784, 2147
BsrDI GCAATG 3 cut(s) 227, 2196, 2623
BsrFI RCCGGY 1 cut(s) 2612
BsrGI TGTACA 2 cut(s) 1068, 2569
BsrI ACTGG 5 cut(s) 264, 548, 1003, 1044, 1527
BssAI RCCGGY 1 cut(s) 2612
BssMI GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
BssNI GRCGYC 1 cut(s) 3029
BssSI CACGAG 1 cut(s) 1860
BssT1I CCWWGG 5 cut(s) 73, 272, 1137, 1789, 2696
Bst2BI CACGAG 1 cut(s) 1860
Bst2UI CCWGG 8 cut(s) 360, 411, 513, 953, 1052, 2472, 2855, 2958
Bst4CI ACNGT 6 cut(s) 551, 603, 742, 2231, 2442, 2574
Bst6I CTCTTC 2 cut(s) 123, 435
BstACI GRCGYC 1 cut(s) 3029
BstAUI TGTACA 2 cut(s) 1068, 2569
BstBAI YACGTR 2 cut(s) 461, 2447
BstC8I GCNNGC 3 cut(s) 1285, 2614, 2923
BstDEI CTNAG 4 cut(s) 760, 2064, 2283, 2928
BstDSI CCRYGG 3 cut(s) 73, 272, 1137
BstENI CCTNNNNNAGG 1 cut(s) 33
BstF5I GGATG 7 cut(s) 139, 295, 618, 1609, 1663, 1684, 2396
BstHHI GCGC 1 cut(s) 1609
BstKTI GATC 6 cut(s) 141, 208, 1549, 1747, 2101, 2362
BstMAI GTCTC 2 cut(s) 1959, 2594
BstMBI GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
BstMWI GCNNNNNNNGC 6 cut(s) 97, 698, 1716, 2843, 2944, 2953
BstNI CCWGG 8 cut(s) 360, 411, 513, 953, 1052, 2472, 2855, 2958
BstNSI RCATGY 4 cut(s) 1069, 1180, 1771, 2641
BstSFI CTRYAG 4 cut(s) 847, 891, 1201, 1837
BstSLI GKGCMC 2 cut(s) 2323, 2927
BstSNI TACGTA 1 cut(s) 2447
BstV1I GCAGC 5 cut(s) 833, 1783, 1882, 2821, 2824
BstV2I GAAGAC 3 cut(s) 1806, 2064, 3054
BstX2I RGATCY 2 cut(s) 138, 1546
BstXI CCANNNNNNTGG 2 cut(s) 333, 952
BstYI RGATCY 2 cut(s) 138, 1546
BsuRI GGCC 7 cut(s) 91, 776, 1050, 1151, 2024, 2724, 2925
BtgI CCRYGG 3 cut(s) 73, 272, 1137
BtrI CACGTC 3 cut(s) 1627, 2008, 2039
BtsCI GGATG 7 cut(s) 139, 295, 618, 1609, 1663, 1684, 2396
BtsI GCAGTG 3 cut(s) 383, 679, 2184
BtsIMutI CAGTG 7 cut(s) 383, 541, 679, 1037, 1427, 2061, 2184
Cac8I GCNNGC 3 cut(s) 1285, 2614, 2923
CaiI CAGNNNCTG 2 cut(s) 767, 2603
CciI TCATGA 1 cut(s) 2769
CfoI GCGC 1 cut(s) 1609
Cfr10I RCCGGY 1 cut(s) 2612
Cfr13I GGNCC 7 cut(s) 89, 269, 323, 336, 2723, 2923, 2924
Cfr9I CCCGGG 3 cut(s) 2238, 2776, 3032
CseI GACGC 1 cut(s) 3037
Csp6I GTAC 7 cut(s) 785, 1069, 1298, 2148, 2336, 2570, 2649
CviQI GTAC 7 cut(s) 785, 1069, 1298, 2148, 2336, 2570, 2649
DdeI CTNAG 4 cut(s) 760, 2064, 2283, 2928
DpnI GATC 6 cut(s) 140, 207, 1548, 1746, 2100, 2361
DpnII GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
DraI TTTAAA 2 cut(s) 166, 1494
DraIII CACNNNGTG 1 cut(s) 2318
EaeI YGGCCR 3 cut(s) 774, 1048, 2022
Eam1104I CTCTTC 2 cut(s) 123, 435
EarI CTCTTC 2 cut(s) 123, 435
Ecl136II GAGCTC 2 cut(s) 68, 1688
Eco105I TACGTA 1 cut(s) 2447
Eco130I CCWWGG 5 cut(s) 73, 272, 1137, 1789, 2696
Eco24I GRGCYC 5 cut(s) 42, 70, 1690, 2777, 2927
Eco32I GATATC 1 cut(s) 1185
Eco47I GGWCC 3 cut(s) 269, 323, 336
Eco53kI GAGCTC 2 cut(s) 68, 1688
Eco57I CTGAAG 3 cut(s) 147, 1329, 2395
Eco88I CYCGRG 3 cut(s) 2238, 2776, 3032
EcoICRI GAGCTC 2 cut(s) 68, 1688
EcoNI CCTNNNNNAGG 1 cut(s) 33
EcoO109I RGGNCCY 1 cut(s) 2924
EcoRI GAATTC 2 cut(s) 1372, 2550
EcoRII CCWGG 8 cut(s) 358, 409, 511, 951, 1050, 2470, 2853, 2956
EcoRV GATATC 1 cut(s) 1185
EcoT14I CCWWGG 5 cut(s) 73, 272, 1137, 1789, 2696
EcoT38I GRGCYC 5 cut(s) 42, 70, 1690, 2777, 2927
ErhI CCWWGG 5 cut(s) 73, 272, 1137, 1789, 2696
FalI AAGNNNNNCTT 2 cut(s) 2067, 2099
FaqI GGGAC 6 cut(s) 1559, 1770, 2014, 2288, 2702, 3040
FauI CCCGC 3 cut(s) 1318, 2914, 3017
FbaI TGATCA 1 cut(s) 2098
Fnu4HI GCNGC 6 cut(s) 847, 1048, 1772, 1896, 2835, 2838
FokI GGATG 7 cut(s) 146, 302, 625, 1616, 1670, 1691, 2403
FriOI GRGCYC 5 cut(s) 42, 70, 1690, 2777, 2927
Fsp4HI GCNGC 6 cut(s) 847, 1048, 1772, 1896, 2835, 2838
FspBI CTAG 6 cut(s) 84, 795, 1242, 2042, 2424, 2727
FspI TGCGCA 1 cut(s) 1608
GlaI GCGC 1 cut(s) 1608
GluI GCNGC 6 cut(s) 847, 1048, 1772, 1896, 2835, 2838
GsuI CTGGAG 4 cut(s) 999, 1461, 1704, 2352
HaeIII GGCC 7 cut(s) 91, 776, 1050, 1151, 2024, 2724, 2925
HapII CCGG 6 cut(s) 2239, 2613, 2721, 2777, 2893, 3033
HgaI GACGC 1 cut(s) 3037
HhaI GCGC 1 cut(s) 1609
Hin1I GRCGYC 1 cut(s) 3029
Hin6I GCGC 1 cut(s) 1607
HinP1I GCGC 1 cut(s) 1607
HindIII AAGCTT 2 cut(s) 1717, 2452
HpaII CCGG 6 cut(s) 2239, 2613, 2721, 2777, 2893, 3033
HphI GGTGA 5 cut(s) 20, 56, 322, 1845, 2138
Hpy166II GTNNAC 5 cut(s) 339, 1071, 1624, 2321, 2570
Hpy8I GTNNAC 5 cut(s) 339, 1071, 1624, 2321, 2570
HpyCH4III ACNGT 6 cut(s) 551, 603, 742, 2231, 2442, 2574
HpyCH4IV ACGT 9 cut(s) 364, 460, 1626, 2007, 2038, 2347, 2446, 2585, 3054
HpyF10VI GCNNNNNNNGC 6 cut(s) 97, 698, 1716, 2843, 2944, 2953
HpyF3I CTNAG 4 cut(s) 760, 2064, 2283, 2928
HpySE526I ACGT 9 cut(s) 364, 460, 1626, 2007, 2038, 2347, 2446, 2585, 3054
Hsp92I GRCGYC 1 cut(s) 3029
HspAI GCGC 1 cut(s) 1607
KpnI GGTACC 2 cut(s) 788, 2151
KroI GCCGGC 1 cut(s) 2612
KroNI GCCGGC 1 cut(s) 2614
Ksp22I TGATCA 1 cut(s) 2098
Kzo9I GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
LmnI GCTCC 5 cut(s) 947, 980, 1120, 1685, 2596
Lsp1109I GCAGC 5 cut(s) 833, 1783, 1882, 2821, 2824
MaeI CTAG 6 cut(s) 84, 795, 1242, 2042, 2424, 2727
MaeII ACGT 9 cut(s) 364, 460, 1626, 2007, 2038, 2347, 2446, 2585, 3054
MaeIII GTNAC 8 cut(s) 44, 749, 1020, 1142, 1483, 2008, 2348, 2442
MalI GATC 6 cut(s) 140, 207, 1548, 1746, 2100, 2361
MboI GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
MfeI CAATTG 1 cut(s) 2748
MflI RGATCY 2 cut(s) 138, 1546
MhlI GDGCHC 8 cut(s) 42, 70, 466, 1176, 1690, 2323, 2777, 2927
MlsI TGGCCA 2 cut(s) 776, 2024
MluNI TGGCCA 2 cut(s) 776, 2024
MlyI GAGTC 2 cut(s) 1529, 3097
MmeI TCCRAC 6 cut(s) 549, 604, 1330, 2284, 2368, 3116
Mox20I TGGCCA 2 cut(s) 776, 2024
MroNI GCCGGC 1 cut(s) 2612
MroXI GAANNNNTTC 1 cut(s) 19
MscI TGGCCA 2 cut(s) 776, 2024
MseI TTAA 8 cut(s) 165, 405, 1007, 1164, 1493, 1554, 2517, 2658
MslI CAYNNNNRTG 2 cut(s) 1042, 2189
Msp20I TGGCCA 2 cut(s) 776, 2024
MspA1I CMGCKG 1 cut(s) 1804
MspI CCGG 6 cut(s) 2239, 2613, 2721, 2777, 2893, 3033
MunI CAATTG 1 cut(s) 2748
Mva1269I GAATGC 7 cut(s) 51, 669, 728, 1049, 1202, 1794, 3026
MvaI CCWGG 8 cut(s) 360, 411, 513, 953, 1052, 2472, 2855, 2958
MwoI GCNNNNNNNGC 6 cut(s) 97, 698, 1716, 2843, 2944, 2953
NaeI GCCGGC 1 cut(s) 2614
NciI CCSGG 8 cut(s) 2239, 2240, 2721, 2777, 2778, 2894, 3033, 3034
NcoI CCATGG 3 cut(s) 73, 272, 1137
NdeII GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
NgoMIV GCCGGC 1 cut(s) 2612
NlaIV GGNNCC 5 cut(s) 691, 786, 1116, 2149, 2925
NmuCI GTSAC 4 cut(s) 44, 749, 1483, 2008
NsbI TGCGCA 1 cut(s) 1608
NspI RCATGY 4 cut(s) 1069, 1180, 1771, 2641
PagI TCATGA 1 cut(s) 2769
PciI ACATGT 1 cut(s) 1176
PcsI WCGNNNNNNNCGW 1 cut(s) 3015
PctI GAATGC 7 cut(s) 51, 669, 728, 1049, 1202, 1794, 3026
PdiI GCCGGC 1 cut(s) 2614
PdmI GAANNNNTTC 1 cut(s) 19
PfoI TCCNGGA 2 cut(s) 951, 2892
PkrI GCNGC 6 cut(s) 848, 1049, 1773, 1897, 2836, 2839
PleI GAGTC 2 cut(s) 1528, 3096
PpsI GAGTC 2 cut(s) 1528, 3096
Ppu21I YACGTR 2 cut(s) 461, 2447
PscI ACATGT 1 cut(s) 1176
Psp124BI GAGCTC 2 cut(s) 70, 1690
Psp6I CCWGG 8 cut(s) 358, 409, 511, 951, 1050, 2470, 2853, 2956
PspGI CCWGG 8 cut(s) 358, 409, 511, 951, 1050, 2470, 2853, 2956
PspN4I GGNNCC 5 cut(s) 691, 786, 1116, 2149, 2925
PspOMI GGGCCC 1 cut(s) 2923
PspPI GGNCC 7 cut(s) 89, 269, 323, 336, 2723, 2923, 2924
PsrI GAACNNNNNNTAC 2 cut(s) 7, 39
PstI CTGCAG 1 cut(s) 851
PstNI CAGNNNCTG 2 cut(s) 767, 2603
PsuI RGATCY 2 cut(s) 138, 1546
PvuII CAGCTG 1 cut(s) 1804
RsaI GTAC 7 cut(s) 786, 1070, 1299, 2149, 2337, 2571, 2650
RsaNI GTAC 7 cut(s) 785, 1069, 1298, 2148, 2336, 2570, 2649
RseI CAYNNNNRTG 2 cut(s) 1042, 2189
SacI GAGCTC 2 cut(s) 70, 1690
SaqAI TTAA 8 cut(s) 165, 405, 1007, 1164, 1493, 1554, 2517, 2658
SatI GCNGC 6 cut(s) 847, 1048, 1772, 1896, 2835, 2838
Sau3AI GATC 6 cut(s) 138, 205, 1546, 1744, 2098, 2359
Sau96I GGNCC 7 cut(s) 89, 269, 323, 336, 2723, 2923, 2924
ScaI AGTACT 2 cut(s) 1299, 2337
SchI GAGTC 2 cut(s) 1529, 3097
SduI GDGCHC 8 cut(s) 42, 70, 466, 1176, 1690, 2323, 2777, 2927
SfcI CTRYAG 4 cut(s) 847, 891, 1201, 1837
SinI GGWCC 3 cut(s) 269, 323, 336
SmaI CCCGGG 3 cut(s) 2240, 2778, 3034
SmiMI CAYNNNNRTG 2 cut(s) 1042, 2189
SmlI CTYRAG 1 cut(s) 1401
SmoI CTYRAG 1 cut(s) 1401
SnaBI TACGTA 1 cut(s) 2447
SpeI ACTAGT 1 cut(s) 83
SsiI CCGC 6 cut(s) 145, 191, 1047, 1311, 2921, 3024
SspI AATATT 1 cut(s) 2629
SspMI CTAG 6 cut(s) 84, 795, 1242, 2042, 2424, 2727
SstI GAGCTC 2 cut(s) 70, 1690
StyI CCWWGG 5 cut(s) 73, 272, 1137, 1789, 2696
TaaI ACNGT 6 cut(s) 551, 603, 742, 2231, 2442, 2574
TaiI ACGT 9 cut(s) 367, 463, 1629, 2010, 2041, 2350, 2449, 2588, 3057
TaqI TCGA 5 cut(s) 64, 986, 2670, 3009, 3086
TaqII GACCGA 1 cut(s) 2925
TatI WGTACW 4 cut(s) 1068, 1297, 2335, 2569
TauI GCSGC 1 cut(s) 1050
Tru1I TTAA 8 cut(s) 165, 405, 1007, 1164, 1493, 1554, 2517, 2658
Tru9I TTAA 8 cut(s) 165, 405, 1007, 1164, 1493, 1554, 2517, 2658
TscAI CASTG 7 cut(s) 383, 548, 679, 1044, 1434, 2068, 2191
TseFI GTSAC 4 cut(s) 44, 749, 1483, 2008
TseI GCWGC 5 cut(s) 846, 1771, 1895, 2834, 2837
Tsp45I GTSAC 4 cut(s) 44, 749, 1483, 2008
TspGWI ACGGA 1 cut(s) 901
TspMI CCCGGG 3 cut(s) 2238, 2776, 3032
TspRI CASTG 7 cut(s) 383, 548, 679, 1044, 1434, 2068, 2191
VneI GTGCAC 1 cut(s) 2319
VpaK11BI GGWCC 3 cut(s) 269, 323, 336
XagI CCTNNNNNAGG 1 cut(s) 33
XapI RAATTY 9 cut(s) 19, 714, 947, 961, 1009, 1372, 2110, 2371, 2550
XbaI TCTAGA 2 cut(s) 1241, 2041
XceI RCATGY 4 cut(s) 1069, 1180, 1771, 2641
XcmI CCANNNNNNNNNTGG 2 cut(s) 1144, 2989
XmaI CCCGGG 3 cut(s) 2238, 2776, 3032
XmnI GAANNNNTTC 1 cut(s) 19
XspI CTAG 6 cut(s) 84, 795, 1242, 2042, 2424, 2727
ZrmI AGTACT 2 cut(s) 1299, 2337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.