Rh6BG445300
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0006637
Physical Location & Seq
Reverse (-)
66153246 .. 66159318
6073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG445300.1

Sequence Viewer

Length: 3255 bp
ATGGACGGTGACAGAACAAATTCTACTCCAGAAGGGTCGGGTGGTGACAATATTCAGAGAGCTCGAGCTCTCCATGGGAGGTCTAGTGGGCCTACGAGGCGTTCTACAAAAGGACAATGGACGCCTGAAGAGGATGAAATCTTGCGTAGGGCAGTTCAGAGTTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGTTTCAAGGATCGGACTGATGTGCAATGCCTGCATAGGTGGCAGAAAGTTTTGAATCCTGAATTGGTCAAGGGTCCATGGTCTAAAGAGGAGGACGAAATTATTGTTGAATTGGTCAAAAAGTATGGCCCCAAAAAGTGGTCCACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGCAGGGAAAGGTGGCATAATCATCTTAATCCTGGCATAAACAAAGAAGCATGGACGCAGGATGAGGAGTTGGCTCTGATTCGTGCTCATCAAATTTATGGGAACAAATGGGCAGAGCTAACAAAATTCTTGCCTGGAAGGACAGACAACGCTATAAAAAATCACTGGAACAGTTCTGTGAAAAAGAAGTTGGATTCTTACTTGAAGTCGGGATTACTACCAGACTTAGAAGGAACGCCTCATGTTGGACACCAAAACCAACCCATAATCTCATCTTGTTCAAGAGTTCAGAACAGTGGAGATGATAGTGCTCCCAGAGGTGCTGAAGGAGAAGAAATATCAGAATGCAGTCAAGATTCAAATGTTGCTGGTTGCTTTCAGTCTGGAACTGAAATGGTCAATGTGGTATTACATACTAGAGATCGATCGCATATACGTGAAGTATCCCGGTTAGGAAATGACCCAAGCTCCAGTCCAGCATCCTGTTCAGAACCATATTACCCGTCTATGGGGGATGCCACTTTTTCCATCCCAGAAATACCTTCTGAAATTGTTAGCTCTTCCAAATTTATAGAGCAGAGTTTCTCACATGATGCTGGAGAGTCAATGAGTGGGGATTTCCAGTTTAATATGCAGGAGTTAACTAATATTTCTTCACTAGAATCAGAGCAGGAGGCATCTGGGATGCATACCCATTGTATGAGTTCTAATGAGATCCATGATGTGGTCAACTTTCCATTTCAGACTGCTGGTGCATTTCCTGCTTCTACTTCCATGGGGAATATGGCGGATGGTTCAGTTAAATCAGAGCGGATGTTGATATCTGACGATGAATGTTGCAGGGCTTTGTTTTCTGAGGCAATAAATCAGGGATATTTCTCTAGAGATTTTACAAATGGGTTAAACATGGTTGATTTGATTGCATGCACAGATTCATTACTTTTACAATCGTCGTCAAACCTCCAGATGTCTGAAACCGGTAGATCTTCTCAACTTTATTGTCCTTTGAACTCAGATGTAGTTGGAACTTCATGCTCTCAACCAGTTTCTGCTCATAATGGTCCACTGATATTTGCTGGAGAGGCTAATAATTTATTCAGAGTTCAAGAACAGGAGTATGTCACAAATTCAGAGGATGGATTTGTCTACACTAATGACACTGCCAGATCTCCCAGCAATGTTGTTGGAAATGAGACTAGAATGCAAGAGCAATCTGATCTGGTTGAGGATCCTTCAAATTTAGTCCCTGTAAATACATTTGATTCGGGATTGGACACGCAAACTTCTCCTTCTCTGGATGTGAGATCAGATGTGCACACAGAACAGCAGGATGACGGAGCTCTATGTTATGAGCCTCCTCGTTTTCCGAGTTTGGATATTCCATTTTTAAGTTGTGATCTTGTACAATCAGGAAATGACATGCAACAAGAATATAGTCCCCTTGGAATTCGTCAGCTGATGATGTCCTCTATGAATTGCCTTACTCCATTTAGGTTATGGGATTCACCATCTCGCGATGGTAGCCCTGATGCTGTGCTGAAAAGTGCTGCTAAAACATTTACAGGCACACCATCCATTTTGAAGAAACGGCACCGTGACCTGTTGTCTCCATTGTCGCCATTGTCGGATAGAAGGATTGATAAAAAGCTTGGGACTGACGTGACCTCCAGTTTGGCCAGAGATTTTTCACGTTTAGAGGTAATGTTTGAAGACAGTGAGACACAGGAGGCACCATTGCATTATCCATCTTCAAATCAGCAGAGGACCTCTGATGCGCATGAAGAAGACAAAGAGAATATGGACACCTGTGAAACCAGAATAGAAGAAGGGACTGATACTGTTGCAATATCAGCTGATGAAATAGCACAGAAACACTTTGATGACATTGAATCCCAGGAAAAGATGAAGCAAGGAAATGCTGATGTTGATGCTAAGACAAAGGCTGATGCTGTCCCCTCCTCTCACGATGCGCAACAGTCTTCTGGAGTTCTTGCTGAACATAACACAAATGATCTGCTATTGTATTCTCCTGATCAAGCTGGTTGTAAAGCTGAAAAAGCCTTGAGCTTGAGTGCTGGAACTCCAAAAGTACAGCATAGTAAATCTTTTTCTGCCAAACAATGTTCCTCTGTTATTACTCCAACTATAACAGTGAAGAAGCGAGAAAGTTATTTGGTTGCACAGACATGTATACAATCTGATTTGTTGTCAGCTCCCCTGGAGACAACTAGTGATAATGCTGGGAATGGTGCTAGTACTGAGACCATATTCGGTGTTACACCACTTAAAAGAAGTATTGATTCCCCTTCAGCATGGAAATCCCCTTCAGCGTGGAAATCTCCTTCAGCATGGAAATCCCCCTGGTTTATCAACTCCTTTCTTCCTGGTCCAAGGGTTGATACAGAAATAACAATTGAGGATATAGGATTTTTCATGAGCCCAGGAGATAGAAGTTATGATGCCATAGGGTTGATGAAACAGATAAGCGAGCATACTGCTTCTGCATACGCCAATGCCCAGGAAGTTTTGGGAAATGAAACTCCAGAGTCATTGTTGAAGGAAAGACGGAAAGACCATGGCATTGTGGACTTGGATAAGAATCTTGCACCACCAAATCAGCTGGGGAGTAGTTCCCTTTCCGCGCCAAATGTTGTGGTAAATCTTTATGCTCGCAAAATGAGTCAAGAAAACCTACTGCACTTGTTTTATATCAATGCTGCAAAGTGTGCTAATCTTTATGGGAATCCTCAGGTGGAGCGTCGCACCCTTGACTTTAGCGAGTGTGAAACACCTGGGAAGGGAAAAGAAAGCGGAAAATTCTCGAATTCTAAAAGCTTCTCAAGTCCATCTAGCTATTTGTTGAAGGGATGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006275 GO:0006355 GO:0006357 GO:0008150 GO:0008285 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009623 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0032875 GO:0042127 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0090329 GO:0097159 GO:0140110 GO:1901181 GO:1901363 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04151 ko04218 ko05166 map04151 map04218 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

1084

Amino Acids

119.45

Weight (kDa)

5.19

Isoelectric Point (pI)

59.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 37 - 83 6.4e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 40 - 98 3.9e-17 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 89 - 135 1.4e-20 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 92 - 149 6e-19 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 141 - 184 6.1e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 144 - 189 4e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 2154, 2349
AccB1I GGYRCC 2 cut(s) 1968, 2107
AccB7I CCANNNNNTGG 2 cut(s) 333, 1102
AccBSI CCGCTC 1 cut(s) 1189
AccI GTMKAC 2 cut(s) 1524, 2569
AccII CGCG 2 cut(s) 1893, 3020
AciI CCGC 5 cut(s) 191, 1166, 1189, 3018, 3189
AclWI GGATC 4 cut(s) 213, 1087, 1601, 1614
AcoI YGGCCR 1 cut(s) 2052
AcsI RAATTY 9 cut(s) 19, 471, 503, 944, 1504, 1615, 1824, 3194, 3202
AcuI CTGAAG 5 cut(s) 147, 723, 2670, 2688, 2706
AcyI GRCGYC 1 cut(s) 122
AfaI GTAC 3 cut(s) 1782, 2469, 2635
AfiI CCNNNNNNNGG 6 cut(s) 333, 623, 886, 887, 1102, 3176
AflIII ACRYGT 1 cut(s) 2564
AgeI ACCGGT 1 cut(s) 1355
AhdI GACNNNNNGTC 1 cut(s) 1981
AhlI ACTAGT 1 cut(s) 2606
AjiI CACGTC 1 cut(s) 2038
AjuI GAANNNNNNNTTGG 4 cut(s) 242, 274, 551, 583
Alw21I GWGCWC 6 cut(s) 64, 70, 466, 691, 1695, 1720
Alw26I GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
Alw44I GTGCAC 1 cut(s) 1691
AlwI GGATC 4 cut(s) 213, 1087, 1601, 1614
AlwNI CAGNNNCTG 1 cut(s) 1427
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 3 cut(s) 89, 322, 2052
ApaLI GTGCAC 1 cut(s) 1691
ApeKI GCWGC 2 cut(s) 1925, 3095
ApoI RAATTY 9 cut(s) 19, 471, 503, 944, 1504, 1615, 1824, 3194, 3202
ArsI GACNNNNNNTTYG 2 cut(s) 2032, 2064
AsiGI ACCGGT 1 cut(s) 1355
Asp700I GAANNNNTTC 1 cut(s) 19
AspLEI GCGC 3 cut(s) 2155, 2350, 3022
AspS9I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
AsuC2I CCSGG 1 cut(s) 826
AsuHPI GGTGA 3 cut(s) 20, 56, 1875
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
AxyI CCTNAGG 1 cut(s) 3126
BaeGI GKGCMC 1 cut(s) 1695
BalI TGGCCA 1 cut(s) 2054
BamHI GGATCC 1 cut(s) 1606
BanI GGYRCC 2 cut(s) 1968, 2107
BanII GRGCYC 4 cut(s) 64, 70, 1720, 2819
BbsI GAAGAC 3 cut(s) 2094, 2169, 2349
Bbv12I GWGCWC 6 cut(s) 64, 70, 466, 691, 1695, 1720
BbvI GCAGC 2 cut(s) 1912, 3082
BccI CCATC 8 cut(s) 914, 1163, 1508, 1889, 1894, 1957, 2131, 3232
BceAI ACGGC 1 cut(s) 1982
BcgI CGANNNNNNTGC 2 cut(s) 2855, 2889
BciVI GTATCC 1 cut(s) 832
BclI TGATCA 1 cut(s) 2410
BcnI CCSGG 1 cut(s) 826
BcoDI GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
BcuI ACTAGT 1 cut(s) 2606
BfaI CTAG 8 cut(s) 84, 795, 1037, 1260, 1575, 2607, 2631, 3228
BfuI GTATCC 1 cut(s) 832
BglI GCCNNNNNGGC 1 cut(s) 97
BglII AGATCT 2 cut(s) 1361, 1544
BisI GCNGC 2 cut(s) 1926, 3096
BlsI GCNGC 2 cut(s) 1927, 3097
BmcAI AGTACT 1 cut(s) 2635
Bme18I GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
BmeRI GACNNNNNGTC 1 cut(s) 1981
BmeT110I CYCGRG 1 cut(s) 63
BmgBI CACGTC 1 cut(s) 2038
BmgT120I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
BmiI GGNNCC 5 cut(s) 270, 325, 1608, 1970, 2109
BpiI GAAGAC 3 cut(s) 2094, 2169, 2349
BpmI CTGGAG 9 cut(s) 12, 832, 996, 1325, 1476, 2029, 2382, 2618, 2904
BpuEI CTTGAG 3 cut(s) 2461, 2467, 3202
BpuMI CCSGG 1 cut(s) 826
Bsa29I ATCGAT 1 cut(s) 802
BsaAI YACGTR 1 cut(s) 815
BsaBI GATNNNNATC 1 cut(s) 2976
BsaHI GRCGYC 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 2633
BsaWI WCCGGW 1 cut(s) 1355
BsaXI ACNNNNNCTCC 6 cut(s) 70, 100, 830, 860, 2027, 2057
Bsc4I CCNNNNNNNGG 6 cut(s) 333, 623, 886, 887, 1102, 3176
Bse118I RCCGGY 1 cut(s) 1355
Bse1I ACTGG 5 cut(s) 548, 849, 1000, 1421, 2046
Bse21I CCTNAGG 1 cut(s) 3126
Bse3DI GCAATG 4 cut(s) 227, 383, 1561, 2111
Bse8I GATNNNNATC 1 cut(s) 2976
BseCI ATCGAT 1 cut(s) 802
BseJI GATNNNNATC 1 cut(s) 2976
BseLI CCNNNNNNNGG 6 cut(s) 333, 623, 886, 887, 1102, 3176
BseMI GCAATG 4 cut(s) 227, 383, 1561, 2111
BseMII CTCAG 4 cut(s) 1224, 1404, 2628, 3140
BseNI ACTGG 5 cut(s) 548, 849, 1000, 1421, 2046
BseRI GAGGAG 4 cut(s) 299, 458, 1725, 2326
BseSI GKGCMC 1 cut(s) 1695
BseXI GCAGC 2 cut(s) 1912, 3082
BseYI CCCAGC 3 cut(s) 1550, 2618, 2998
BsgI GTGCAG 1 cut(s) 3059
Bsh1236I CGCG 2 cut(s) 1893, 3020
Bsh1285I CGRYCG 1 cut(s) 806
BshFI GGCC 3 cut(s) 91, 324, 2054
BshNI GGYRCC 2 cut(s) 1968, 2107
BshTI ACCGGT 1 cut(s) 1355
BshVI ATCGAT 1 cut(s) 802
BsiEI CGRYCG 1 cut(s) 806
BsiHKAI GWGCWC 6 cut(s) 64, 70, 466, 691, 1695, 1720
BsiHKCI CYCGRG 1 cut(s) 63
BsiSI CCGG 2 cut(s) 826, 1356
BslFI GGGAC 5 cut(s) 1607, 1800, 2044, 2221, 2315
BslI CCNNNNNNNGG 6 cut(s) 333, 623, 886, 887, 1102, 3176
BsmAI GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
BsmFI GGGAC 5 cut(s) 1607, 1800, 2044, 2221, 2315
BsmI GAATGC 2 cut(s) 728, 1584
BsnI GGCC 3 cut(s) 91, 324, 2054
Bso31I GGTCTC 1 cut(s) 2633
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 7 cut(s) 64, 70, 466, 691, 1695, 1720, 2819
Bsp1407I TGTACA 1 cut(s) 1780
Bsp19I CCATGG 4 cut(s) 73, 272, 1152, 2953
Bsp68I TCGCGA 1 cut(s) 1893
BspACI CCGC 5 cut(s) 191, 1166, 1189, 3018, 3189
BspANI GGCC 3 cut(s) 91, 324, 2054
BspCNI CTCAG 4 cut(s) 1225, 1403, 2629, 3139
BspDI ATCGAT 1 cut(s) 802
BspFNI CGCG 2 cut(s) 1893, 3020
BspHI TCATGA 1 cut(s) 2811
BspLI GGNNCC 5 cut(s) 270, 325, 1608, 1970, 2109
BspPI GGATC 4 cut(s) 213, 1087, 1601, 1614
BspQI GCTCTTC 1 cut(s) 943
BspT107I GGYRCC 2 cut(s) 1968, 2107
BspTNI GGTCTC 1 cut(s) 2633
BsrBI CCGCTC 1 cut(s) 1189
BsrDI GCAATG 4 cut(s) 227, 383, 1561, 2111
BsrFI RCCGGY 1 cut(s) 1355
BsrGI TGTACA 1 cut(s) 1780
BsrI ACTGG 5 cut(s) 548, 849, 1000, 1421, 2046
BssAI RCCGGY 1 cut(s) 1355
BssNAI GTATAC 1 cut(s) 2570
BssNI GRCGYC 1 cut(s) 122
BssT1I CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
Bst1107I GTATAC 1 cut(s) 2570
Bst4CI ACNGT 8 cut(s) 8, 551, 674, 1973, 2093, 2218, 2355, 2530
Bst6I CTCTTC 2 cut(s) 123, 943
BstACI GRCGYC 1 cut(s) 122
BstAPI GCANNNNNTGC 3 cut(s) 226, 1139, 3104
BstAUI TGTACA 1 cut(s) 1780
BstBAI YACGTR 1 cut(s) 815
BstC8I GCNNGC 4 cut(s) 227, 1303, 2867, 3049
BstDEI CTNAG 6 cut(s) 604, 1233, 1390, 2310, 2637, 3126
BstDSI CCRYGG 4 cut(s) 73, 272, 1152, 2953
BstFNI CGCG 2 cut(s) 1893, 3020
BstHHI GCGC 3 cut(s) 2155, 2350, 3022
BstMAI GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
BstMCI CGRYCG 1 cut(s) 806
BstMWI GCNNNNNNNGC 9 cut(s) 97, 226, 235, 1139, 1460, 1899, 2228, 2435, 3104
BstNSI RCATGY 3 cut(s) 1305, 1801, 2568
BstSLI GKGCMC 1 cut(s) 1695
BstUI CGCG 2 cut(s) 1893, 3020
BstV1I GCAGC 2 cut(s) 1912, 3082
BstV2I GAAGAC 3 cut(s) 2094, 2169, 2349
BstX2I RGATCY 4 cut(s) 1092, 1361, 1544, 1606
BstYI RGATCY 4 cut(s) 1092, 1361, 1544, 1606
BstZ17I GTATAC 1 cut(s) 2570
Bsu15I ATCGAT 1 cut(s) 802
Bsu36I CCTNAGG 1 cut(s) 3126
BsuI GTATCC 1 cut(s) 832
BsuRI GGCC 3 cut(s) 91, 324, 2054
BsuTUI ATCGAT 1 cut(s) 802
BtgI CCRYGG 4 cut(s) 73, 272, 1152, 2953
BtgZI GCGATG 1 cut(s) 1908
BtrI CACGTC 1 cut(s) 2038
BtsI GCAGTG 1 cut(s) 1536
BtsIMutI CAGTG 6 cut(s) 541, 679, 1442, 1536, 2098, 2535
BtuMI TCGCGA 1 cut(s) 1893
Cac8I GCNNGC 4 cut(s) 227, 1303, 2867, 3049
CaiI CAGNNNCTG 1 cut(s) 1427
CciI TCATGA 1 cut(s) 2811
CfoI GCGC 3 cut(s) 2155, 2350, 3022
Cfr10I RCCGGY 1 cut(s) 1355
Cfr13I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
ClaI ATCGAT 1 cut(s) 802
CseI GACGC 3 cut(s) 130, 442, 3125
Csp6I GTAC 3 cut(s) 1781, 2468, 2634
CspAI ACCGGT 1 cut(s) 1355
CspCI CAANNNNNGTGG 2 cut(s) 3012, 3047
CviQI GTAC 3 cut(s) 1781, 2468, 2634
DdeI CTNAG 6 cut(s) 604, 1233, 1390, 2310, 2637, 3126
DraI TTTAAA 1 cut(s) 166
DriI GACNNNNNGTC 1 cut(s) 1981
EaeI YGGCCR 1 cut(s) 2052
Eam1104I CTCTTC 2 cut(s) 123, 943
Eam1105I GACNNNNNGTC 1 cut(s) 1981
EarI CTCTTC 2 cut(s) 123, 943
EciI GGCGGA 1 cut(s) 1181
Ecl136II GAGCTC 3 cut(s) 62, 68, 1718
Eco130I CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
Eco24I GRGCYC 4 cut(s) 64, 70, 1720, 2819
Eco31I GGTCTC 1 cut(s) 2633
Eco32I GATATC 1 cut(s) 1200
Eco47I GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
Eco53kI GAGCTC 3 cut(s) 62, 68, 1718
Eco57I CTGAAG 5 cut(s) 147, 723, 2670, 2688, 2706
Eco81I CCTNAGG 1 cut(s) 3126
Eco88I CYCGRG 1 cut(s) 63
EcoICRI GAGCTC 3 cut(s) 62, 68, 1718
EcoO109I RGGNCCY 1 cut(s) 2142
EcoRI GAATTC 2 cut(s) 1824, 3202
EcoRV GATATC 1 cut(s) 1200
EcoT14I CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
EcoT22I ATGCAT 1 cut(s) 1068
EcoT38I GRGCYC 4 cut(s) 64, 70, 1720, 2819
ErhI CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
FaqI GGGAC 5 cut(s) 1607, 1800, 2044, 2221, 2315
FbaI TGATCA 1 cut(s) 2410
FblI GTMKAC 2 cut(s) 1524, 2569
Fnu4HI GCNGC 2 cut(s) 1926, 3096
FriOI GRGCYC 4 cut(s) 64, 70, 1720, 2819
Fsp4HI GCNGC 2 cut(s) 1926, 3096
FspAI RTGCGCAY 1 cut(s) 2154
FspBI CTAG 8 cut(s) 84, 795, 1037, 1260, 1575, 2607, 2631, 3228
FspI TGCGCA 2 cut(s) 2154, 2349
GlaI GCGC 3 cut(s) 2154, 2349, 3021
GluI GCNGC 2 cut(s) 1926, 3096
GsaI CCCAGC 3 cut(s) 1554, 2622, 3002
GsuI CTGGAG 9 cut(s) 12, 832, 996, 1325, 1476, 2029, 2382, 2618, 2904
HaeIII GGCC 3 cut(s) 91, 324, 2054
HapII CCGG 2 cut(s) 826, 1356
HgaI GACGC 3 cut(s) 130, 442, 3125
HhaI GCGC 3 cut(s) 2155, 2350, 3022
Hin1I GRCGYC 1 cut(s) 122
Hin6I GCGC 3 cut(s) 2153, 2348, 3020
HinP1I GCGC 3 cut(s) 2153, 2348, 3020
HincII GTYRAC 2 cut(s) 1020, 1108
HindII GTYRAC 2 cut(s) 1020, 1108
HindIII AAGCTT 2 cut(s) 2024, 3211
HpaI GTTAAC 1 cut(s) 1020
HpaII CCGG 2 cut(s) 826, 1356
HphI GGTGA 3 cut(s) 20, 56, 1875
Hpy166II GTNNAC 8 cut(s) 339, 1020, 1108, 1442, 1525, 1693, 2570, 2965
Hpy8I GTNNAC 8 cut(s) 339, 1020, 1108, 1442, 1525, 1693, 2570, 2965
Hpy99I CGWCG 2 cut(s) 1333, 3141
HpyCH4III ACNGT 8 cut(s) 8, 551, 674, 1973, 2093, 2218, 2355, 2530
HpyCH4IV ACGT 4 cut(s) 364, 814, 2037, 2068
HpyF10VI GCNNNNNNNGC 9 cut(s) 97, 226, 235, 1139, 1460, 1899, 2228, 2435, 3104
HpyF3I CTNAG 6 cut(s) 604, 1233, 1390, 2310, 2637, 3126
HpySE526I ACGT 4 cut(s) 364, 814, 2037, 2068
Hsp92I GRCGYC 1 cut(s) 122
HspAI GCGC 3 cut(s) 2153, 2348, 3020
Ksp22I TGATCA 1 cut(s) 2410
KspAI GTTAAC 1 cut(s) 1020
LguI GCTCTTC 1 cut(s) 943
LmnI GCTCC 5 cut(s) 694, 851, 1715, 2596, 3133
Lsp1109I GCAGC 2 cut(s) 1912, 3082
MaeI CTAG 8 cut(s) 84, 795, 1037, 1260, 1575, 2607, 2631, 3228
MaeII ACGT 4 cut(s) 364, 814, 2037, 2068
MaeIII GTNAC 6 cut(s) 8, 44, 1498, 1973, 2038, 2653
MbiI CCGCTC 1 cut(s) 1189
MfeI CAATTG 1 cut(s) 2790
MflI RGATCY 4 cut(s) 1092, 1361, 1544, 1606
MhlI GDGCHC 7 cut(s) 64, 70, 466, 691, 1695, 1720, 2819
MlsI TGGCCA 1 cut(s) 2054
MluNI TGGCCA 1 cut(s) 2054
MlyI GAGTC 3 cut(s) 989, 2933, 3067
MmeI TCCRAC 6 cut(s) 549, 604, 1381, 1543, 1983, 2543
Mox20I TGGCCA 1 cut(s) 2054
Mph1103I ATGCAT 1 cut(s) 1068
MroXI GAANNNNTTC 1 cut(s) 19
MscI TGGCCA 1 cut(s) 2054
MseI TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
MslI CAYNNNNRTG 3 cut(s) 813, 2256, 2563
Msp20I TGGCCA 1 cut(s) 2054
MspA1I CMGCKG 3 cut(s) 1834, 2231, 2998
MspI CCGG 2 cut(s) 826, 1356
MunI CAATTG 1 cut(s) 2790
Mva1269I GAATGC 2 cut(s) 728, 1584
MvnI CGCG 2 cut(s) 1893, 3020
MwoI GCNNNNNNNGC 9 cut(s) 97, 226, 235, 1139, 1460, 1899, 2228, 2435, 3104
NciI CCSGG 1 cut(s) 826
NcoI CCATGG 4 cut(s) 73, 272, 1152, 2953
NlaIV GGNNCC 5 cut(s) 270, 325, 1608, 1970, 2109
NmuCI GTSAC 5 cut(s) 8, 44, 1498, 1973, 2038
NruI TCGCGA 1 cut(s) 1893
NsbI TGCGCA 2 cut(s) 2154, 2349
NsiI ATGCAT 1 cut(s) 1068
NspI RCATGY 3 cut(s) 1305, 1801, 2568
PaeI GCATGC 1 cut(s) 1305
PaeR7I CTCGAG 1 cut(s) 63
PagI TCATGA 1 cut(s) 2811
PciI ACATGT 1 cut(s) 2564
PciSI GCTCTTC 1 cut(s) 943
PctI GAATGC 2 cut(s) 728, 1584
PdmI GAANNNNTTC 1 cut(s) 19
PflMI CCANNNNNTGG 2 cut(s) 333, 1102
PinAI ACCGGT 1 cut(s) 1355
PkrI GCNGC 2 cut(s) 1927, 3097
Ple19I CGATCG 1 cut(s) 806
PleI GAGTC 3 cut(s) 988, 2932, 3066
PpsI GAGTC 3 cut(s) 988, 2932, 3066
Ppu21I YACGTR 1 cut(s) 815
PpuMI RGGWCCY 1 cut(s) 2142
PscI ACATGT 1 cut(s) 2564
Psp124BI GAGCTC 3 cut(s) 64, 70, 1720
Psp5II RGGWCCY 1 cut(s) 2142
PspFI CCCAGC 3 cut(s) 1550, 2618, 2998
PspN4I GGNNCC 5 cut(s) 270, 325, 1608, 1970, 2109
PspPI GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
PspPPI RGGWCCY 1 cut(s) 2142
PspXI VCTCGAGB 1 cut(s) 63
PsrI GAACNNNNNNTAC 2 cut(s) 7, 39
PstNI CAGNNNCTG 1 cut(s) 1427
PsuI RGATCY 4 cut(s) 1092, 1361, 1544, 1606
PvuI CGATCG 1 cut(s) 806
PvuII CAGCTG 3 cut(s) 1834, 2231, 2998
RruI TCGCGA 1 cut(s) 1893
RsaI GTAC 3 cut(s) 1782, 2469, 2635
RsaNI GTAC 3 cut(s) 1781, 2468, 2634
RseI CAYNNNNRTG 3 cut(s) 813, 2256, 2563
SacI GAGCTC 3 cut(s) 64, 70, 1720
SapI GCTCTTC 1 cut(s) 943
SaqAI TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
SatI GCNGC 2 cut(s) 1926, 3096
Sau96I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
ScaI AGTACT 1 cut(s) 2635
SchI GAGTC 3 cut(s) 989, 2933, 3067
SduI GDGCHC 7 cut(s) 64, 70, 466, 691, 1695, 1720, 2819
Sfr274I CTCGAG 1 cut(s) 63
SinI GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
SlaI CTCGAG 1 cut(s) 63
SmiMI CAYNNNNRTG 3 cut(s) 813, 2256, 2563
SmlI CTYRAG 4 cut(s) 63, 2440, 2446, 3217
SmoI CTYRAG 4 cut(s) 63, 2440, 2446, 3217
SpeI ACTAGT 1 cut(s) 2606
SphI GCATGC 1 cut(s) 1305
SsiI CCGC 5 cut(s) 191, 1166, 1189, 3018, 3189
SspI AATATT 2 cut(s) 52, 1027
SspMI CTAG 8 cut(s) 84, 795, 1037, 1260, 1575, 2607, 2631, 3228
SstI GAGCTC 3 cut(s) 64, 70, 1720
StyI CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
TaaI ACNGT 8 cut(s) 8, 551, 674, 1973, 2093, 2218, 2355, 2530
TaiI ACGT 4 cut(s) 367, 817, 2040, 2071
TaqI TCGA 3 cut(s) 64, 802, 3200
TatI WGTACW 3 cut(s) 1780, 2467, 2633
Tru1I TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
Tru9I TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
TscAI CASTG 6 cut(s) 548, 679, 1449, 1543, 2098, 2535
TseFI GTSAC 5 cut(s) 8, 44, 1498, 1973, 2038
TseI GCWGC 2 cut(s) 1925, 3095
Tsp45I GTSAC 5 cut(s) 8, 44, 1498, 1973, 2038
TspGWI ACGGA 2 cut(s) 1728, 2959
TspRI CASTG 6 cut(s) 548, 679, 1449, 1543, 2098, 2535
Van91I CCANNNNNTGG 2 cut(s) 333, 1102
VneI GTGCAC 1 cut(s) 1691
VpaK11BI GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
XapI RAATTY 9 cut(s) 19, 471, 503, 944, 1504, 1615, 1824, 3194, 3202
XbaI TCTAGA 1 cut(s) 1259
XceI RCATGY 3 cut(s) 1305, 1801, 2568
XcmI CCANNNNNNNNNTGG 2 cut(s) 1159, 1872
XhoI CTCGAG 1 cut(s) 63
XmiI GTMKAC 2 cut(s) 1524, 2569
XmnI GAANNNNTTC 1 cut(s) 19
XspI CTAG 8 cut(s) 84, 795, 1037, 1260, 1575, 2607, 2631, 3228
ZrmI AGTACT 1 cut(s) 2635
Zsp2I ATGCAT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.