Rw6G039770
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0006637
Physical Location & Seq
Forward (+)
63681594 .. 63686643
5050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G039770.1

Sequence Viewer

Length: 3156 bp
ATGGACGGTGACAGAACAAATTCTACTCCAGAAGGGTCAGGTGGTGACAGTATTCAGAGAGCTCGAGCTCTCCATGGGAGGTCTAGTGGGCCTACAAGGCGTTCTACAAAAGGACAATGGACGCCTGAAGAGGATGAAATCTTGCGTAGGGCAGTTCAGAGTTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGTTTCAAGGATCGGACTGATGTGCAATGCCTGCATAGGTGGCAGAAAGTTTTGAATCCTGAATTGGTCAAGGGTCCATGGTCTAAAGAGGAGGACGAAATTATTGTTGAATTGGTCAAAAAGTATGGCCCAAAAAAGTGGTCCACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGCAGGGAAAGGTGGCATAATCATCTTAATCCTGGAATAAACAAAGAAGCATGGACGCAGGATGAGGAGTTGGCTCTGATTCGTGCTCATCAAATTTATGGGAACAAATGGGCAGAGCTAACAAAATTCTTGCCTGGAAGGACAGACAACGCTATAAAAAATCACTGGAACAGTTCTGTGAAAAAGAAGTTGGATTCTTACTTGAAGTCGGGATTACTACCAGACTTAGAAGGAACGCCTCATGTTGGACACCAAAACCAACCCATAATCTCATCTTGTTCAAGAGTTCAGAACAGTGGAGATGATAGTGCTCCCAGAGGTGCTGAAGGAGAAGAAATATCAGAATGCAGTCAAGATTCAAATGTTGCTGGTTGCTTTCAGTCTAGAACTGAAATGGTCAATGTGGTATTACATACTAGAGATCGATCGCATATACGTGAAGTATCCCGGTTAGGAAATGACCCAAGCTCCAGTCCAGCGTCCTGTTCAGAACCATATTACCCGTCTATGGGGGATGCCACTTTTTCCATCCCAGAAATACCTCCTGAAATTGTTAGCTCTTCCAAATTTATAGAGCAGAGTTTCTCACATGATGCTGGAGAGTCAATGAGTGGGGATTTCCAGTTTAATATGCAGGAGTTAACTAATATTTCTTCACTAGAATCAGAGCAGGGGGCATCCGGGATGCATACCCATTGTATGAGTTCTAATGAGATCCATGATGTGGTCAACTTTCCATTTCAGACTGCTGGTGCATTTCCTGCTTCTACTTCCATGGGGAATATGGCGGATGGTTCAGTTAAATCAGAGCGGATGTTGATATCTGACGATGAATGCTGCAGGGCTTTGTTTTCTGAGGCAATAAATCAGGGATATTTCTCTAGAGATTTTACAAATGGGTTAAACATGGTTGATTTGATTGCATGCACAGATTCATTACTTTTACAATCGTCGTCAAACCTCCAGATGTCTGAAACTGGTAGATCTTCTCAACTTTATTGTCCATTGAACTCAGATGTAGTTGGAACTTCATGCTCTCAACCAGTTTCTGCTCATAATGGTCCACTGATATTTGCTGGAGAGGCTAATAATTTATTCAGAGTTCAAGAACAGGAGTATGTCACAAATTCAGAGGATGGATTTGTCTACACTAATGACACTGCCAGATCTCCCAGCAATGTTGTTGGAAATGAGACTAGAATGCAAGAGCAATCTGATCTGGTTGAGGATCCTTCAAATTTAGTCCCTGTAAATACATTTGATTCGGGATTGGACACGCAAACTTCTCCTTCTCTGGATGTGAGATCAGATGTGCACACAGAACAGCAGGATGACGGAGCTCTATGTTATGAGCCTCCTCGTTTTCCGAGTTTGGATATTCCATTTTTAAGTTGTGATCTTGTACAATCAGGAAATGACATGCAACAAGAATATAGTCCCCTTGGAATTCGTCAGCTGATGATGTCCTCTATGAATTGCCTTACTCCATTTAGGTTATGGGATTCACCATCTCGTGATGGTAGCCCTGATGCTGTGCTGAAAAGTGCTGCTAAAACATTTACAGGCACACCATCCATTTTGAAGAAACGGCACCGTGACCTGTTGTCTCCATTGTCGCCATTGTCGGATAGAAGGATTGATAAAAAGCTTGGGACTGACGTGACCTCCAGTTTGGCCAGAGATTTTTCACGTTTAGAGGTAATGTTTGAAGACAGTGAGACACAGGAGGCGCCGTTGCATTATCCATCTTCAAATCAGCAGAGGACCTCTGATGCGCATGAAGAAGACAAAGAGAATATGGACACCTGTGAAACCAGAATAGAAGAAGGGACTGATACTGTTGCAATATCAGCTGATGAAATAGCACAGAAACACTTTGATGACAGTGAATCCCAGGAAAAGATGAAGCAAGGAAATGCTGATGTTGATGCTAAGACTAAGGCTGATGCTGTCCCCTCTTCTCACGATGCGCAACAGTCTTCTGGAGTTCTTGCTGAACATAACACAAATGATCTGCTATTGTATTCTCCTGATCAAGCTGGTTGTAAAGCTGAAAAAGCCTTGAGCTTGAGTGCTGGAACTCCAAAAGTACAGCATAGTAAATCTTTTTCTGCCAAACAATGTTCCTCTGTTATTACTCCAACTATAACAGTGAAGAAGCGAGAAAGTTATTTGGTTACACAGACATGTATACAATCTGATTTGTTGTCAGCTCCCCTGGAGACAACTAGTGATAATGCTGGGAATGGTGCTAGTACTGAGACTATATTCGGTGTTACACCACTTAAAAGAAGTATTGATTCCCCTTCAGCATGGAAATCCCCTTCAGCATGGAAATCTCCTTCAGCATGGAAATCCCCCTGGTTTATCAACTCCTTTCTTCCTGGTCCAAGGGTTGATACAGAAATAACAATTGAGGATATAGGATTTTTCATGAGCCCAGGAGATAGAAGTTATGATGCCATAGGGTTGATGAAACAGATAAGCGAGCATACTGCTTCTGCATACGCCAATGCCCAGGAAGTTTTGGGAAATGAAACTCCTGAGTCATTGTTGAAGGAAAGACGGAAAGACCATGGCATGGACTCGGATAAGAATCTTGCACCACCAAATCAGCTGGGGAGTAGTTCCCTTTCCGCGCCAAATGTTGTGGTGGAGCGTCGCACCCTTGACTTTAGCGAGTGTGAAACACCTGGGAAGGGAAAAGAAAGCGGAAAATTCTTGAATGCTAAAAGCTTCTCAAGTCCATCTAGCTATTTGTTGAAGGGATGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006275 GO:0006355 GO:0006357 GO:0008150 GO:0008285 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009623 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0032875 GO:0042127 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0090329 GO:0097159 GO:0140110 GO:1901181 GO:1901363 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04151 ko04218 ko05166 map04151 map04218 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

1051

Amino Acids

115.68

Weight (kDa)

5.16

Isoelectric Point (pI)

59.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 37 - 83 6.2e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 40 - 98 3.7e-17 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 89 - 135 1.4e-20 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 92 - 149 5.8e-19 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 141 - 184 5.8e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 144 - 189 3.8e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 2154, 2349
AccB1I GGYRCC 2 cut(s) 1968, 2107
AccB7I CCANNNNNTGG 2 cut(s) 1102, 2959
AccBSI CCGCTC 1 cut(s) 1189
AccI GTMKAC 2 cut(s) 1524, 2569
AccII CGCG 1 cut(s) 3017
AciI CCGC 5 cut(s) 191, 1166, 1189, 3015, 3090
AclWI GGATC 4 cut(s) 213, 1087, 1601, 1614
AcoI YGGCCR 1 cut(s) 2052
AcsI RAATTY 8 cut(s) 19, 471, 503, 944, 1504, 1615, 1824, 3095
AcuI CTGAAG 5 cut(s) 147, 723, 2670, 2688, 2706
AcyI GRCGYC 2 cut(s) 122, 2108
AfaI GTAC 3 cut(s) 1782, 2469, 2635
AfiI CCNNNNNNNGG 6 cut(s) 623, 886, 887, 1102, 2959, 3077
AflIII ACRYGT 1 cut(s) 2564
AhdI GACNNNNNGTC 1 cut(s) 1981
AhlI ACTAGT 1 cut(s) 2606
AjiI CACGTC 1 cut(s) 2038
AjuI GAANNNNNNNTTGG 4 cut(s) 242, 274, 551, 583
Alw21I GWGCWC 6 cut(s) 64, 70, 466, 691, 1695, 1720
Alw26I GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
Alw44I GTGCAC 1 cut(s) 1691
AlwI GGATC 4 cut(s) 213, 1087, 1601, 1614
AlwNI CAGNNNCTG 1 cut(s) 1427
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 3 cut(s) 89, 322, 2052
ApaLI GTGCAC 1 cut(s) 1691
ApeKI GCWGC 2 cut(s) 1215, 1925
ApoI RAATTY 8 cut(s) 19, 471, 503, 944, 1504, 1615, 1824, 3095
ArsI GACNNNNNNTTYG 4 cut(s) 320, 352, 2032, 2064
Asp700I GAANNNNTTC 1 cut(s) 19
AspLEI GCGC 4 cut(s) 2110, 2155, 2350, 3019
AspS9I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
AsuC2I CCSGG 2 cut(s) 826, 1060
AsuHPI GGTGA 3 cut(s) 20, 56, 1875
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
BaeGI GKGCMC 1 cut(s) 1695
BalI TGGCCA 1 cut(s) 2054
BamHI GGATCC 1 cut(s) 1606
BanI GGYRCC 2 cut(s) 1968, 2107
BanII GRGCYC 4 cut(s) 64, 70, 1720, 2819
BauI CACGAG 1 cut(s) 1890
BbsI GAAGAC 3 cut(s) 2094, 2169, 2349
Bbv12I GWGCWC 6 cut(s) 64, 70, 466, 691, 1695, 1720
BbvI GCAGC 2 cut(s) 1202, 1912
BccI CCATC 8 cut(s) 914, 1163, 1508, 1889, 1894, 1957, 2131, 3133
BceAI ACGGC 2 cut(s) 1982, 2095
BcgI CGANNNNNNTGC 2 cut(s) 2855, 2889
BciVI GTATCC 1 cut(s) 832
BclI TGATCA 1 cut(s) 2410
BcnI CCSGG 2 cut(s) 826, 1060
BcoDI GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
BcuI ACTAGT 1 cut(s) 2606
BfaI CTAG 9 cut(s) 84, 762, 795, 1037, 1260, 1575, 2607, 2631, 3129
BfmI CTRYAG 1 cut(s) 1216
BfoI RGCGCY 1 cut(s) 2111
BfuI GTATCC 1 cut(s) 832
BglI GCCNNNNNGGC 1 cut(s) 97
BglII AGATCT 2 cut(s) 1361, 1544
BisI GCNGC 2 cut(s) 1216, 1926
BlsI GCNGC 2 cut(s) 1217, 1927
BmcAI AGTACT 1 cut(s) 2635
Bme18I GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
BmeRI GACNNNNNGTC 1 cut(s) 1981
BmeT110I CYCGRG 1 cut(s) 63
BmgBI CACGTC 1 cut(s) 2038
BmgT120I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
BmiI GGNNCC 4 cut(s) 270, 1608, 1970, 2109
BpiI GAAGAC 3 cut(s) 2094, 2169, 2349
BpmI CTGGAG 8 cut(s) 12, 832, 996, 1325, 1476, 2029, 2382, 2618
BpuEI CTTGAG 3 cut(s) 2461, 2467, 3103
BpuMI CCSGG 2 cut(s) 826, 1060
Bsa29I ATCGAT 1 cut(s) 802
BsaAI YACGTR 1 cut(s) 815
BsaBI GATNNNNATC 1 cut(s) 2973
BsaHI GRCGYC 2 cut(s) 122, 2108
BsaXI ACNNNNNCTCC 8 cut(s) 70, 100, 830, 860, 2027, 2057, 2096, 2126
Bsc4I CCNNNNNNNGG 6 cut(s) 623, 886, 887, 1102, 2959, 3077
Bse1I ACTGG 6 cut(s) 548, 849, 1000, 1360, 1421, 2046
Bse3DI GCAATG 3 cut(s) 227, 383, 1561
Bse8I GATNNNNATC 1 cut(s) 2973
BseCI ATCGAT 1 cut(s) 802
BseJI GATNNNNATC 1 cut(s) 2973
BseLI CCNNNNNNNGG 6 cut(s) 623, 886, 887, 1102, 2959, 3077
BseMI GCAATG 3 cut(s) 227, 383, 1561
BseMII CTCAG 4 cut(s) 1224, 1404, 2628, 2913
BseNI ACTGG 6 cut(s) 548, 849, 1000, 1360, 1421, 2046
BseRI GAGGAG 3 cut(s) 299, 458, 1725
BseSI GKGCMC 1 cut(s) 1695
BseXI GCAGC 2 cut(s) 1202, 1912
BseYI CCCAGC 3 cut(s) 1550, 2618, 2995
Bsh1236I CGCG 1 cut(s) 3017
Bsh1285I CGRYCG 1 cut(s) 806
BshFI GGCC 3 cut(s) 91, 324, 2054
BshNI GGYRCC 2 cut(s) 1968, 2107
BshVI ATCGAT 1 cut(s) 802
BsiEI CGRYCG 1 cut(s) 806
BsiHKAI GWGCWC 6 cut(s) 64, 70, 466, 691, 1695, 1720
BsiHKCI CYCGRG 1 cut(s) 63
BsiSI CCGG 2 cut(s) 826, 1059
BslFI GGGAC 5 cut(s) 1607, 1800, 2044, 2221, 2315
BslI CCNNNNNNNGG 6 cut(s) 623, 886, 887, 1102, 2959, 3077
BsmAI GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
BsmFI GGGAC 5 cut(s) 1607, 1800, 2044, 2221, 2315
BsmI GAATGC 4 cut(s) 728, 1217, 1584, 3109
BsnI GGCC 3 cut(s) 91, 324, 2054
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 7 cut(s) 64, 70, 466, 691, 1695, 1720, 2819
Bsp1407I TGTACA 1 cut(s) 1780
Bsp19I CCATGG 4 cut(s) 73, 272, 1152, 2953
BspACI CCGC 5 cut(s) 191, 1166, 1189, 3015, 3090
BspANI GGCC 3 cut(s) 91, 324, 2054
BspCNI CTCAG 4 cut(s) 1225, 1403, 2629, 2914
BspDI ATCGAT 1 cut(s) 802
BspFNI CGCG 1 cut(s) 3017
BspHI TCATGA 1 cut(s) 2811
BspLI GGNNCC 4 cut(s) 270, 1608, 1970, 2109
BspMAI CTGCAG 1 cut(s) 1220
BspPI GGATC 4 cut(s) 213, 1087, 1601, 1614
BspQI GCTCTTC 1 cut(s) 943
BspT107I GGYRCC 2 cut(s) 1968, 2107
BsrBI CCGCTC 1 cut(s) 1189
BsrDI GCAATG 3 cut(s) 227, 383, 1561
BsrGI TGTACA 1 cut(s) 1780
BsrI ACTGG 6 cut(s) 548, 849, 1000, 1360, 1421, 2046
BssNAI GTATAC 1 cut(s) 2570
BssNI GRCGYC 2 cut(s) 122, 2108
BssSI CACGAG 1 cut(s) 1890
BssT1I CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
Bst1107I GTATAC 1 cut(s) 2570
Bst2BI CACGAG 1 cut(s) 1890
Bst6I CTCTTC 3 cut(s) 123, 943, 2341
BstACI GRCGYC 2 cut(s) 122, 2108
BstAPI GCANNNNNTGC 2 cut(s) 226, 1139
BstAUI TGTACA 1 cut(s) 1780
BstBAI YACGTR 1 cut(s) 815
BstC8I GCNNGC 3 cut(s) 227, 1303, 2867
BstDEI CTNAG 7 cut(s) 604, 1233, 1390, 2310, 2316, 2637, 2922
BstDSI CCRYGG 4 cut(s) 73, 272, 1152, 2953
BstFNI CGCG 1 cut(s) 3017
BstH2I RGCGCY 1 cut(s) 2111
BstHHI GCGC 4 cut(s) 2110, 2155, 2350, 3019
BstMAI GTCTC 5 cut(s) 1565, 1989, 2090, 2594, 2633
BstMCI CGRYCG 1 cut(s) 806
BstMWI GCNNNNNNNGC 7 cut(s) 97, 226, 235, 1139, 1460, 2228, 2435
BstNSI RCATGY 3 cut(s) 1305, 1801, 2568
BstSFI CTRYAG 1 cut(s) 1216
BstSLI GKGCMC 1 cut(s) 1695
BstUI CGCG 1 cut(s) 3017
BstV1I GCAGC 2 cut(s) 1202, 1912
BstV2I GAAGAC 3 cut(s) 2094, 2169, 2349
BstX2I RGATCY 4 cut(s) 1092, 1361, 1544, 1606
BstXI CCANNNNNNTGG 1 cut(s) 333
BstYI RGATCY 4 cut(s) 1092, 1361, 1544, 1606
BstZ17I GTATAC 1 cut(s) 2570
Bsu15I ATCGAT 1 cut(s) 802
BsuI GTATCC 1 cut(s) 832
BsuRI GGCC 3 cut(s) 91, 324, 2054
BsuTUI ATCGAT 1 cut(s) 802
BtgI CCRYGG 4 cut(s) 73, 272, 1152, 2953
BtrI CACGTC 1 cut(s) 2038
BtsI GCAGTG 1 cut(s) 1536
BtsIMutI CAGTG 7 cut(s) 541, 679, 1442, 1536, 2098, 2269, 2535
Cac8I GCNNGC 3 cut(s) 227, 1303, 2867
CaiI CAGNNNCTG 1 cut(s) 1427
CciI TCATGA 1 cut(s) 2811
CfoI GCGC 4 cut(s) 2110, 2155, 2350, 3019
Cfr13I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
ClaI ATCGAT 1 cut(s) 802
CseI GACGC 4 cut(s) 130, 442, 846, 3026
Csp6I GTAC 3 cut(s) 1781, 2468, 2634
CspCI CAANNNNNGTGG 2 cut(s) 3009, 3044
CviQI GTAC 3 cut(s) 1781, 2468, 2634
DdeI CTNAG 7 cut(s) 604, 1233, 1390, 2310, 2316, 2637, 2922
DinI GGCGCC 1 cut(s) 2109
DraI TTTAAA 1 cut(s) 166
DriI GACNNNNNGTC 1 cut(s) 1981
EaeI YGGCCR 1 cut(s) 2052
Eam1104I CTCTTC 3 cut(s) 123, 943, 2341
Eam1105I GACNNNNNGTC 1 cut(s) 1981
EarI CTCTTC 3 cut(s) 123, 943, 2341
EciI GGCGGA 1 cut(s) 1181
Ecl136II GAGCTC 3 cut(s) 62, 68, 1718
Eco130I CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
Eco24I GRGCYC 4 cut(s) 64, 70, 1720, 2819
Eco32I GATATC 1 cut(s) 1200
Eco47I GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
Eco53kI GAGCTC 3 cut(s) 62, 68, 1718
Eco57I CTGAAG 5 cut(s) 147, 723, 2670, 2688, 2706
Eco88I CYCGRG 1 cut(s) 63
EcoICRI GAGCTC 3 cut(s) 62, 68, 1718
EcoO109I RGGNCCY 1 cut(s) 2142
EcoRI GAATTC 1 cut(s) 1824
EcoRV GATATC 1 cut(s) 1200
EcoT14I CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
EcoT22I ATGCAT 1 cut(s) 1068
EcoT38I GRGCYC 4 cut(s) 64, 70, 1720, 2819
EgeI GGCGCC 1 cut(s) 2109
EheI GGCGCC 1 cut(s) 2109
ErhI CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
FaqI GGGAC 5 cut(s) 1607, 1800, 2044, 2221, 2315
FbaI TGATCA 1 cut(s) 2410
FblI GTMKAC 2 cut(s) 1524, 2569
Fnu4HI GCNGC 2 cut(s) 1216, 1926
FriOI GRGCYC 4 cut(s) 64, 70, 1720, 2819
Fsp4HI GCNGC 2 cut(s) 1216, 1926
FspAI RTGCGCAY 1 cut(s) 2154
FspBI CTAG 9 cut(s) 84, 762, 795, 1037, 1260, 1575, 2607, 2631, 3129
FspI TGCGCA 2 cut(s) 2154, 2349
GlaI GCGC 4 cut(s) 2109, 2154, 2349, 3018
GluI GCNGC 2 cut(s) 1216, 1926
GsaI CCCAGC 3 cut(s) 1554, 2622, 2999
GsuI CTGGAG 8 cut(s) 12, 832, 996, 1325, 1476, 2029, 2382, 2618
HaeII RGCGCY 1 cut(s) 2111
HaeIII GGCC 3 cut(s) 91, 324, 2054
HapII CCGG 2 cut(s) 826, 1059
HgaI GACGC 4 cut(s) 130, 442, 846, 3026
HhaI GCGC 4 cut(s) 2110, 2155, 2350, 3019
Hin1I GRCGYC 2 cut(s) 122, 2108
Hin6I GCGC 4 cut(s) 2108, 2153, 2348, 3017
HinP1I GCGC 4 cut(s) 2108, 2153, 2348, 3017
HincII GTYRAC 2 cut(s) 1020, 1108
HindII GTYRAC 2 cut(s) 1020, 1108
HindIII AAGCTT 2 cut(s) 2024, 3112
HpaI GTTAAC 1 cut(s) 1020
HpaII CCGG 2 cut(s) 826, 1059
HphI GGTGA 3 cut(s) 20, 56, 1875
Hpy166II GTNNAC 7 cut(s) 339, 1020, 1108, 1442, 1525, 1693, 2570
Hpy8I GTNNAC 7 cut(s) 339, 1020, 1108, 1442, 1525, 1693, 2570
Hpy99I CGWCG 2 cut(s) 1333, 3042
HpyCH4IV ACGT 4 cut(s) 364, 814, 2037, 2068
HpyF10VI GCNNNNNNNGC 7 cut(s) 97, 226, 235, 1139, 1460, 2228, 2435
HpyF3I CTNAG 7 cut(s) 604, 1233, 1390, 2310, 2316, 2637, 2922
HpySE526I ACGT 4 cut(s) 364, 814, 2037, 2068
Hsp92I GRCGYC 2 cut(s) 122, 2108
HspAI GCGC 4 cut(s) 2108, 2153, 2348, 3017
KasI GGCGCC 1 cut(s) 2107
Ksp22I TGATCA 1 cut(s) 2410
KspAI GTTAAC 1 cut(s) 1020
LguI GCTCTTC 1 cut(s) 943
LmnI GCTCC 5 cut(s) 694, 851, 1715, 2596, 3034
Lsp1109I GCAGC 2 cut(s) 1202, 1912
MaeI CTAG 9 cut(s) 84, 762, 795, 1037, 1260, 1575, 2607, 2631, 3129
MaeII ACGT 4 cut(s) 364, 814, 2037, 2068
MaeIII GTNAC 7 cut(s) 8, 44, 1498, 1973, 2038, 2554, 2653
MbiI CCGCTC 1 cut(s) 1189
MfeI CAATTG 1 cut(s) 2790
MflI RGATCY 4 cut(s) 1092, 1361, 1544, 1606
MhlI GDGCHC 7 cut(s) 64, 70, 466, 691, 1695, 1720, 2819
MlsI TGGCCA 1 cut(s) 2054
MluNI TGGCCA 1 cut(s) 2054
Mly113I GGCGCC 1 cut(s) 2108
MlyI GAGTC 3 cut(s) 989, 2933, 2957
MmeI TCCRAC 6 cut(s) 549, 604, 1381, 1543, 1983, 2543
Mox20I TGGCCA 1 cut(s) 2054
Mph1103I ATGCAT 1 cut(s) 1068
MroXI GAANNNNTTC 1 cut(s) 19
MscI TGGCCA 1 cut(s) 2054
MseI TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
MslI CAYNNNNRTG 3 cut(s) 813, 2256, 2563
Msp20I TGGCCA 1 cut(s) 2054
MspA1I CMGCKG 3 cut(s) 1834, 2231, 2995
MspI CCGG 2 cut(s) 826, 1059
MunI CAATTG 1 cut(s) 2790
Mva1269I GAATGC 4 cut(s) 728, 1217, 1584, 3109
MvnI CGCG 1 cut(s) 3017
MwoI GCNNNNNNNGC 7 cut(s) 97, 226, 235, 1139, 1460, 2228, 2435
NarI GGCGCC 1 cut(s) 2108
NciI CCSGG 2 cut(s) 826, 1060
NcoI CCATGG 4 cut(s) 73, 272, 1152, 2953
NlaIV GGNNCC 4 cut(s) 270, 1608, 1970, 2109
NmuCI GTSAC 5 cut(s) 8, 44, 1498, 1973, 2038
NsbI TGCGCA 2 cut(s) 2154, 2349
NsiI ATGCAT 1 cut(s) 1068
NspI RCATGY 3 cut(s) 1305, 1801, 2568
PaeI GCATGC 1 cut(s) 1305
PaeR7I CTCGAG 1 cut(s) 63
PagI TCATGA 1 cut(s) 2811
PciI ACATGT 1 cut(s) 2564
PciSI GCTCTTC 1 cut(s) 943
PctI GAATGC 4 cut(s) 728, 1217, 1584, 3109
PdmI GAANNNNTTC 1 cut(s) 19
PflMI CCANNNNNTGG 2 cut(s) 1102, 2959
PfoI TCCNGGA 2 cut(s) 409, 1058
PkrI GCNGC 2 cut(s) 1217, 1927
Ple19I CGATCG 1 cut(s) 806
PleI GAGTC 3 cut(s) 988, 2932, 2957
PluTI GGCGCC 1 cut(s) 2111
PpsI GAGTC 3 cut(s) 988, 2932, 2957
Ppu21I YACGTR 1 cut(s) 815
PpuMI RGGWCCY 1 cut(s) 2142
PscI ACATGT 1 cut(s) 2564
Psp124BI GAGCTC 3 cut(s) 64, 70, 1720
Psp5II RGGWCCY 1 cut(s) 2142
PspFI CCCAGC 3 cut(s) 1550, 2618, 2995
PspN4I GGNNCC 4 cut(s) 270, 1608, 1970, 2109
PspPI GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
PspPPI RGGWCCY 1 cut(s) 2142
PspXI VCTCGAGB 1 cut(s) 63
PsrI GAACNNNNNNTAC 2 cut(s) 7, 39
PstI CTGCAG 1 cut(s) 1220
PstNI CAGNNNCTG 1 cut(s) 1427
PsuI RGATCY 4 cut(s) 1092, 1361, 1544, 1606
PvuI CGATCG 1 cut(s) 806
PvuII CAGCTG 3 cut(s) 1834, 2231, 2995
RsaI GTAC 3 cut(s) 1782, 2469, 2635
RsaNI GTAC 3 cut(s) 1781, 2468, 2634
RseI CAYNNNNRTG 3 cut(s) 813, 2256, 2563
SacI GAGCTC 3 cut(s) 64, 70, 1720
SapI GCTCTTC 1 cut(s) 943
SaqAI TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
SatI GCNGC 2 cut(s) 1216, 1926
Sau96I GGNCC 7 cut(s) 89, 269, 323, 336, 1439, 2142, 2765
ScaI AGTACT 1 cut(s) 2635
SchI GAGTC 3 cut(s) 989, 2933, 2957
SduI GDGCHC 7 cut(s) 64, 70, 466, 691, 1695, 1720, 2819
SfcI CTRYAG 1 cut(s) 1216
SfoI GGCGCC 1 cut(s) 2109
Sfr274I CTCGAG 1 cut(s) 63
SinI GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
SlaI CTCGAG 1 cut(s) 63
SmiMI CAYNNNNRTG 3 cut(s) 813, 2256, 2563
SmlI CTYRAG 4 cut(s) 63, 2440, 2446, 3118
SmoI CTYRAG 4 cut(s) 63, 2440, 2446, 3118
SpeI ACTAGT 1 cut(s) 2606
SphI GCATGC 1 cut(s) 1305
SsiI CCGC 5 cut(s) 191, 1166, 1189, 3015, 3090
SspDI GGCGCC 1 cut(s) 2107
SspI AATATT 1 cut(s) 1027
SspMI CTAG 9 cut(s) 84, 762, 795, 1037, 1260, 1575, 2607, 2631, 3129
SstI GAGCTC 3 cut(s) 64, 70, 1720
StyI CCWWGG 6 cut(s) 73, 272, 1152, 1819, 2768, 2953
TaiI ACGT 4 cut(s) 367, 817, 2040, 2071
TaqI TCGA 2 cut(s) 64, 802
TatI WGTACW 3 cut(s) 1780, 2467, 2633
Tru1I TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
Tru9I TTAA 8 cut(s) 165, 405, 1005, 1019, 1179, 1280, 1766, 2664
TscAI CASTG 7 cut(s) 548, 679, 1449, 1543, 2098, 2269, 2535
TseFI GTSAC 5 cut(s) 8, 44, 1498, 1973, 2038
TseI GCWGC 2 cut(s) 1215, 1925
Tsp45I GTSAC 5 cut(s) 8, 44, 1498, 1973, 2038
TspGWI ACGGA 2 cut(s) 1728, 2959
TspRI CASTG 7 cut(s) 548, 679, 1449, 1543, 2098, 2269, 2535
Van91I CCANNNNNTGG 2 cut(s) 1102, 2959
VneI GTGCAC 1 cut(s) 1691
VpaK11BI GGWCC 5 cut(s) 269, 336, 1439, 2142, 2765
XapI RAATTY 8 cut(s) 19, 471, 503, 944, 1504, 1615, 1824, 3095
XbaI TCTAGA 2 cut(s) 761, 1259
XceI RCATGY 3 cut(s) 1305, 1801, 2568
XcmI CCANNNNNNNNNTGG 2 cut(s) 1159, 1872
XhoI CTCGAG 1 cut(s) 63
XmiI GTMKAC 2 cut(s) 1524, 2569
XmnI GAANNNNTTC 1 cut(s) 19
XspI CTAG 9 cut(s) 84, 762, 795, 1037, 1260, 1575, 2607, 2631, 3129
ZrmI AGTACT 1 cut(s) 2635
Zsp2I ATGCAT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.